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Genes within 1Mb (chr1:63210765:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -382646 sc-eQTL 1.99e-01 0.0927 0.072 0.459 B L1
ENSG00000088035 ALG6 -156810 sc-eQTL 1.78e-01 0.101 0.0746 0.459 B L1
ENSG00000116641 DOCK7 522379 sc-eQTL 7.11e-01 -0.0278 0.0749 0.459 B L1
ENSG00000125703 ATG4C 426633 sc-eQTL 5.07e-01 -0.0346 0.052 0.459 B L1
ENSG00000142856 ITGB3BP -382956 sc-eQTL 7.77e-01 -0.0235 0.0828 0.459 B L1
ENSG00000162607 USP1 774468 sc-eQTL 6.75e-01 -0.0302 0.0719 0.459 B L1
ENSG00000203965 EFCAB7 -312607 sc-eQTL 2.86e-01 -0.0905 0.0846 0.459 B L1
ENSG00000079739 PGM1 -382646 sc-eQTL 2.46e-01 0.0721 0.0619 0.459 CD4T L1
ENSG00000088035 ALG6 -156810 sc-eQTL 8.52e-01 -0.0128 0.0685 0.459 CD4T L1
ENSG00000116641 DOCK7 522379 sc-eQTL 3.60e-01 -0.0635 0.0693 0.459 CD4T L1
ENSG00000125703 ATG4C 426633 sc-eQTL 5.13e-01 -0.0367 0.056 0.459 CD4T L1
ENSG00000142856 ITGB3BP -382956 sc-eQTL 9.26e-01 -0.0074 0.0795 0.459 CD4T L1
ENSG00000162607 USP1 774468 sc-eQTL 4.25e-01 -0.0434 0.0543 0.459 CD4T L1
ENSG00000203965 EFCAB7 -312607 sc-eQTL 8.02e-01 -0.0179 0.0714 0.459 CD4T L1
ENSG00000079739 PGM1 -382646 sc-eQTL 7.43e-01 -0.0223 0.0678 0.459 CD8T L1
ENSG00000088035 ALG6 -156810 sc-eQTL 5.88e-01 0.0406 0.0747 0.459 CD8T L1
ENSG00000116641 DOCK7 522379 sc-eQTL 2.26e-01 -0.0917 0.0755 0.459 CD8T L1
ENSG00000125703 ATG4C 426633 sc-eQTL 5.37e-01 0.0444 0.0719 0.459 CD8T L1
ENSG00000142856 ITGB3BP -382956 sc-eQTL 2.52e-01 -0.0922 0.0802 0.459 CD8T L1
ENSG00000162607 USP1 774468 sc-eQTL 9.15e-01 -0.00671 0.0627 0.459 CD8T L1
ENSG00000203965 EFCAB7 -312607 sc-eQTL 4.36e-01 0.0625 0.0801 0.459 CD8T L1
ENSG00000079739 PGM1 -382646 sc-eQTL 1.60e-01 -0.107 0.0755 0.459 DC L1
ENSG00000088035 ALG6 -156810 sc-eQTL 4.84e-01 0.0548 0.0782 0.459 DC L1
ENSG00000116641 DOCK7 522379 sc-eQTL 3.11e-02 -0.172 0.0793 0.459 DC L1
ENSG00000125703 ATG4C 426633 sc-eQTL 1.13e-01 -0.0992 0.0624 0.459 DC L1
ENSG00000142856 ITGB3BP -382956 sc-eQTL 6.34e-01 -0.0418 0.0877 0.459 DC L1
ENSG00000162607 USP1 774468 sc-eQTL 8.33e-01 -0.0162 0.0766 0.459 DC L1
ENSG00000203965 EFCAB7 -312607 sc-eQTL 8.16e-01 -0.0178 0.0764 0.459 DC L1
ENSG00000079739 PGM1 -382646 sc-eQTL 8.76e-01 -0.0118 0.0755 0.459 Mono L1
ENSG00000088035 ALG6 -156810 sc-eQTL 7.42e-01 0.0259 0.0788 0.459 Mono L1
ENSG00000116641 DOCK7 522379 sc-eQTL 3.02e-01 -0.0787 0.0761 0.459 Mono L1
ENSG00000125703 ATG4C 426633 sc-eQTL 3.63e-01 -0.0468 0.0514 0.459 Mono L1
ENSG00000142856 ITGB3BP -382956 sc-eQTL 8.52e-02 -0.14 0.0809 0.459 Mono L1
ENSG00000162607 USP1 774468 sc-eQTL 6.82e-01 -0.0274 0.0669 0.459 Mono L1
ENSG00000079739 PGM1 -382646 sc-eQTL 1.23e-01 -0.0972 0.0627 0.459 NK L1
ENSG00000088035 ALG6 -156810 sc-eQTL 9.07e-01 0.00867 0.074 0.459 NK L1
ENSG00000116641 DOCK7 522379 sc-eQTL 8.42e-01 0.0122 0.0609 0.459 NK L1
ENSG00000125703 ATG4C 426633 sc-eQTL 7.35e-01 0.0222 0.0654 0.459 NK L1
ENSG00000142856 ITGB3BP -382956 sc-eQTL 2.81e-01 -0.0876 0.0811 0.459 NK L1
ENSG00000162607 USP1 774468 sc-eQTL 7.19e-01 -0.0262 0.0726 0.459 NK L1
ENSG00000203965 EFCAB7 -312607 sc-eQTL 8.47e-01 -0.017 0.0883 0.459 NK L1
ENSG00000079739 PGM1 -382646 sc-eQTL 2.84e-01 0.0787 0.0732 0.459 Other_T L1
ENSG00000088035 ALG6 -156810 sc-eQTL 1.15e-01 0.116 0.0733 0.459 Other_T L1
ENSG00000116641 DOCK7 522379 sc-eQTL 4.73e-01 0.0541 0.0752 0.459 Other_T L1
ENSG00000125703 ATG4C 426633 sc-eQTL 8.39e-01 0.0133 0.0652 0.459 Other_T L1
ENSG00000142856 ITGB3BP -382956 sc-eQTL 9.58e-01 0.00307 0.0578 0.459 Other_T L1
ENSG00000162607 USP1 774468 sc-eQTL 7.76e-01 0.0143 0.0501 0.459 Other_T L1
ENSG00000203965 EFCAB7 -312607 sc-eQTL 1.97e-01 0.115 0.0889 0.459 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -382646 sc-eQTL 9.48e-01 -0.0061 0.094 0.459 B_Activated L2
ENSG00000088035 ALG6 -156810 sc-eQTL 8.27e-01 -0.0198 0.0901 0.459 B_Activated L2
ENSG00000116641 DOCK7 522379 sc-eQTL 7.48e-01 0.0269 0.0838 0.459 B_Activated L2
ENSG00000125703 ATG4C 426633 sc-eQTL 8.07e-01 0.0216 0.0882 0.459 B_Activated L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 7.55e-02 -0.153 0.0854 0.459 B_Activated L2
ENSG00000162607 USP1 774468 sc-eQTL 2.32e-01 -0.112 0.093 0.459 B_Activated L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 3.77e-01 -0.072 0.0814 0.459 B_Activated L2
ENSG00000079739 PGM1 -382646 sc-eQTL 2.72e-01 0.0958 0.087 0.457 B_Intermediate L2
ENSG00000088035 ALG6 -156810 sc-eQTL 8.70e-01 -0.0146 0.0886 0.457 B_Intermediate L2
ENSG00000116641 DOCK7 522379 sc-eQTL 3.74e-01 0.0753 0.0845 0.457 B_Intermediate L2
ENSG00000125703 ATG4C 426633 sc-eQTL 9.56e-02 -0.119 0.0712 0.457 B_Intermediate L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 5.43e-01 -0.052 0.0853 0.457 B_Intermediate L2
ENSG00000162607 USP1 774468 sc-eQTL 6.57e-01 -0.0379 0.0852 0.457 B_Intermediate L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 4.54e-01 0.0634 0.0845 0.457 B_Intermediate L2
ENSG00000079739 PGM1 -382646 sc-eQTL 3.09e-01 0.0858 0.0841 0.455 B_Memory L2
ENSG00000088035 ALG6 -156810 sc-eQTL 9.65e-03 0.22 0.0844 0.455 B_Memory L2
ENSG00000116641 DOCK7 522379 sc-eQTL 8.98e-01 0.0103 0.0804 0.455 B_Memory L2
ENSG00000125703 ATG4C 426633 sc-eQTL 3.23e-01 -0.0755 0.0762 0.455 B_Memory L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 3.45e-01 -0.0826 0.0873 0.455 B_Memory L2
ENSG00000162607 USP1 774468 sc-eQTL 1.08e-01 0.141 0.0877 0.455 B_Memory L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 2.13e-01 -0.108 0.0865 0.455 B_Memory L2
ENSG00000079739 PGM1 -382646 sc-eQTL 4.13e-01 0.0711 0.0867 0.459 B_Naive1 L2
ENSG00000088035 ALG6 -156810 sc-eQTL 3.00e-01 0.0903 0.087 0.459 B_Naive1 L2
ENSG00000116641 DOCK7 522379 sc-eQTL 2.73e-01 -0.0915 0.0833 0.459 B_Naive1 L2
ENSG00000125703 ATG4C 426633 sc-eQTL 1.00e-01 -0.106 0.0639 0.459 B_Naive1 L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 4.81e-01 -0.0603 0.0853 0.459 B_Naive1 L2
ENSG00000162607 USP1 774468 sc-eQTL 6.62e-01 -0.0328 0.075 0.459 B_Naive1 L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 6.02e-01 -0.0475 0.091 0.459 B_Naive1 L2
ENSG00000079739 PGM1 -382646 sc-eQTL 5.13e-01 0.0558 0.0852 0.457 B_Naive2 L2
ENSG00000088035 ALG6 -156810 sc-eQTL 8.31e-01 -0.019 0.0889 0.457 B_Naive2 L2
ENSG00000116641 DOCK7 522379 sc-eQTL 8.11e-01 -0.0205 0.0855 0.457 B_Naive2 L2
ENSG00000125703 ATG4C 426633 sc-eQTL 6.33e-01 -0.0393 0.0823 0.457 B_Naive2 L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 5.32e-01 0.0558 0.0892 0.457 B_Naive2 L2
ENSG00000162607 USP1 774468 sc-eQTL 6.59e-01 -0.0376 0.085 0.457 B_Naive2 L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 8.71e-01 0.0144 0.0888 0.457 B_Naive2 L2
ENSG00000079739 PGM1 -382646 sc-eQTL 3.22e-01 -0.0845 0.0851 0.459 CD4_CTL L2
ENSG00000088035 ALG6 -156810 sc-eQTL 8.13e-01 0.0213 0.0902 0.459 CD4_CTL L2
ENSG00000116641 DOCK7 522379 sc-eQTL 5.33e-01 0.0492 0.0788 0.459 CD4_CTL L2
ENSG00000125703 ATG4C 426633 sc-eQTL 1.46e-01 -0.119 0.0811 0.459 CD4_CTL L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 5.58e-01 0.0511 0.0872 0.459 CD4_CTL L2
ENSG00000162607 USP1 774468 sc-eQTL 6.92e-02 -0.15 0.0824 0.459 CD4_CTL L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 7.47e-01 -0.0267 0.0829 0.459 CD4_CTL L2
ENSG00000079739 PGM1 -382646 sc-eQTL 7.42e-02 0.125 0.0695 0.459 CD4_Naive L2
ENSG00000088035 ALG6 -156810 sc-eQTL 3.34e-01 -0.0735 0.076 0.459 CD4_Naive L2
ENSG00000116641 DOCK7 522379 sc-eQTL 3.88e-01 -0.0646 0.0747 0.459 CD4_Naive L2
ENSG00000125703 ATG4C 426633 sc-eQTL 3.73e-01 -0.059 0.066 0.459 CD4_Naive L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 8.58e-01 -0.0145 0.0808 0.459 CD4_Naive L2
ENSG00000162607 USP1 774468 sc-eQTL 3.31e-01 -0.06 0.0616 0.459 CD4_Naive L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 2.89e-01 -0.0851 0.08 0.459 CD4_Naive L2
ENSG00000079739 PGM1 -382646 sc-eQTL 3.76e-01 0.064 0.0722 0.459 CD4_TCM L2
ENSG00000088035 ALG6 -156810 sc-eQTL 9.96e-01 -0.00043 0.084 0.459 CD4_TCM L2
ENSG00000116641 DOCK7 522379 sc-eQTL 8.45e-01 -0.0145 0.0744 0.459 CD4_TCM L2
ENSG00000125703 ATG4C 426633 sc-eQTL 9.80e-01 0.00178 0.0725 0.459 CD4_TCM L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 7.17e-01 -0.031 0.0854 0.459 CD4_TCM L2
ENSG00000162607 USP1 774468 sc-eQTL 7.13e-01 0.0258 0.07 0.459 CD4_TCM L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 7.73e-01 -0.0239 0.0826 0.459 CD4_TCM L2
ENSG00000079739 PGM1 -382646 sc-eQTL 1.18e-01 -0.134 0.0854 0.459 CD4_TEM L2
ENSG00000088035 ALG6 -156810 sc-eQTL 3.40e-01 0.0825 0.0862 0.459 CD4_TEM L2
ENSG00000116641 DOCK7 522379 sc-eQTL 3.75e-01 -0.0747 0.084 0.459 CD4_TEM L2
ENSG00000125703 ATG4C 426633 sc-eQTL 3.54e-01 0.0758 0.0816 0.459 CD4_TEM L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 6.53e-01 0.038 0.0844 0.459 CD4_TEM L2
ENSG00000162607 USP1 774468 sc-eQTL 5.66e-01 -0.046 0.0799 0.459 CD4_TEM L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 5.37e-01 0.054 0.0874 0.459 CD4_TEM L2
ENSG00000079739 PGM1 -382646 sc-eQTL 1.72e-01 -0.106 0.0771 0.459 CD8_CTL L2
ENSG00000088035 ALG6 -156810 sc-eQTL 7.02e-01 0.0315 0.0824 0.459 CD8_CTL L2
ENSG00000116641 DOCK7 522379 sc-eQTL 5.38e-01 -0.0481 0.0781 0.459 CD8_CTL L2
ENSG00000125703 ATG4C 426633 sc-eQTL 5.16e-01 0.054 0.0831 0.459 CD8_CTL L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 6.91e-01 0.0345 0.0865 0.459 CD8_CTL L2
ENSG00000162607 USP1 774468 sc-eQTL 2.84e-01 0.083 0.0773 0.459 CD8_CTL L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 3.30e-01 0.0864 0.0884 0.459 CD8_CTL L2
ENSG00000079739 PGM1 -382646 sc-eQTL 9.06e-01 -0.00936 0.0793 0.459 CD8_Naive L2
ENSG00000088035 ALG6 -156810 sc-eQTL 7.89e-01 0.022 0.0821 0.459 CD8_Naive L2
ENSG00000116641 DOCK7 522379 sc-eQTL 2.07e-01 -0.107 0.0845 0.459 CD8_Naive L2
ENSG00000125703 ATG4C 426633 sc-eQTL 5.47e-01 -0.0491 0.0814 0.459 CD8_Naive L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 1.72e-01 -0.112 0.0821 0.459 CD8_Naive L2
ENSG00000162607 USP1 774468 sc-eQTL 1.52e-01 -0.0997 0.0694 0.459 CD8_Naive L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 2.11e-01 -0.0971 0.0775 0.459 CD8_Naive L2
ENSG00000079739 PGM1 -382646 sc-eQTL 4.54e-01 -0.0668 0.089 0.454 CD8_TCM L2
ENSG00000088035 ALG6 -156810 sc-eQTL 4.64e-02 -0.179 0.0893 0.454 CD8_TCM L2
ENSG00000116641 DOCK7 522379 sc-eQTL 5.93e-01 0.0471 0.088 0.454 CD8_TCM L2
ENSG00000125703 ATG4C 426633 sc-eQTL 2.24e-01 0.11 0.0897 0.454 CD8_TCM L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 1.01e-01 -0.143 0.0869 0.454 CD8_TCM L2
ENSG00000162607 USP1 774468 sc-eQTL 9.04e-01 -0.0102 0.0842 0.454 CD8_TCM L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 3.66e-01 0.0806 0.089 0.454 CD8_TCM L2
ENSG00000079739 PGM1 -382646 sc-eQTL 8.55e-01 0.0159 0.0873 0.459 CD8_TEM L2
ENSG00000088035 ALG6 -156810 sc-eQTL 4.93e-01 0.0601 0.0875 0.459 CD8_TEM L2
ENSG00000116641 DOCK7 522379 sc-eQTL 8.20e-01 0.0194 0.0849 0.459 CD8_TEM L2
ENSG00000125703 ATG4C 426633 sc-eQTL 9.04e-01 -0.00982 0.0816 0.459 CD8_TEM L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 6.41e-01 0.0413 0.0883 0.459 CD8_TEM L2
ENSG00000162607 USP1 774468 sc-eQTL 4.93e-01 0.0578 0.0842 0.459 CD8_TEM L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 3.06e-01 0.0877 0.0855 0.459 CD8_TEM L2
ENSG00000079739 PGM1 -382646 sc-eQTL 7.80e-01 0.0231 0.0828 0.457 MAIT L2
ENSG00000088035 ALG6 -156810 sc-eQTL 4.17e-01 0.0666 0.0819 0.457 MAIT L2
ENSG00000116641 DOCK7 522379 sc-eQTL 8.57e-01 0.0142 0.0785 0.457 MAIT L2
ENSG00000125703 ATG4C 426633 sc-eQTL 8.60e-01 -0.0146 0.0828 0.457 MAIT L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 8.71e-02 0.142 0.0824 0.457 MAIT L2
ENSG00000162607 USP1 774468 sc-eQTL 6.36e-02 0.152 0.0817 0.457 MAIT L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 3.82e-02 0.176 0.0846 0.457 MAIT L2
ENSG00000079739 PGM1 -382646 sc-eQTL 7.53e-01 -0.027 0.0857 0.462 NK_CD56bright L2
ENSG00000088035 ALG6 -156810 sc-eQTL 7.30e-01 0.0304 0.0878 0.462 NK_CD56bright L2
ENSG00000116641 DOCK7 522379 sc-eQTL 4.36e-01 0.0593 0.076 0.462 NK_CD56bright L2
ENSG00000125703 ATG4C 426633 sc-eQTL 2.86e-01 0.0906 0.0848 0.462 NK_CD56bright L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 7.81e-01 -0.0247 0.0885 0.462 NK_CD56bright L2
ENSG00000162607 USP1 774468 sc-eQTL 1.80e-01 -0.122 0.0909 0.462 NK_CD56bright L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 6.20e-01 0.0434 0.0873 0.462 NK_CD56bright L2
ENSG00000079739 PGM1 -382646 sc-eQTL 3.13e-01 -0.066 0.0653 0.461 NK_CD56dim L2
ENSG00000088035 ALG6 -156810 sc-eQTL 9.21e-01 0.00824 0.083 0.461 NK_CD56dim L2
ENSG00000116641 DOCK7 522379 sc-eQTL 9.51e-01 0.00446 0.0722 0.461 NK_CD56dim L2
ENSG00000125703 ATG4C 426633 sc-eQTL 1.09e-01 0.117 0.0729 0.461 NK_CD56dim L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 4.64e-01 -0.0613 0.0834 0.461 NK_CD56dim L2
ENSG00000162607 USP1 774468 sc-eQTL 7.28e-01 -0.0281 0.081 0.461 NK_CD56dim L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 2.31e-01 -0.108 0.0899 0.461 NK_CD56dim L2
ENSG00000079739 PGM1 -382646 sc-eQTL 5.36e-01 0.0557 0.0898 0.452 NK_HLA L2
ENSG00000088035 ALG6 -156810 sc-eQTL 5.02e-01 0.0627 0.0931 0.452 NK_HLA L2
ENSG00000116641 DOCK7 522379 sc-eQTL 6.94e-01 0.028 0.0712 0.452 NK_HLA L2
ENSG00000125703 ATG4C 426633 sc-eQTL 5.61e-01 -0.0482 0.0828 0.452 NK_HLA L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 5.77e-01 -0.0486 0.0869 0.452 NK_HLA L2
ENSG00000162607 USP1 774468 sc-eQTL 3.91e-01 -0.0781 0.0909 0.452 NK_HLA L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 6.95e-01 0.0325 0.0828 0.452 NK_HLA L2
ENSG00000079739 PGM1 -382646 sc-eQTL 7.72e-01 -0.0208 0.0715 0.461 NK_cytokine L2
ENSG00000088035 ALG6 -156810 sc-eQTL 6.49e-01 -0.0368 0.0807 0.461 NK_cytokine L2
ENSG00000116641 DOCK7 522379 sc-eQTL 6.72e-01 -0.0317 0.0748 0.461 NK_cytokine L2
ENSG00000125703 ATG4C 426633 sc-eQTL 1.46e-01 -0.111 0.0761 0.461 NK_cytokine L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 7.49e-01 -0.0254 0.0793 0.461 NK_cytokine L2
ENSG00000162607 USP1 774468 sc-eQTL 1.31e-01 0.126 0.0829 0.461 NK_cytokine L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 5.12e-01 0.0554 0.0844 0.461 NK_cytokine L2
ENSG00000079739 PGM1 -382646 sc-eQTL 6.87e-01 0.0403 0.0997 0.481 PB L2
ENSG00000088035 ALG6 -156810 sc-eQTL 3.60e-02 0.218 0.103 0.481 PB L2
ENSG00000116641 DOCK7 522379 sc-eQTL 5.25e-01 0.0714 0.112 0.481 PB L2
ENSG00000125703 ATG4C 426633 sc-eQTL 9.37e-01 -0.00778 0.0977 0.481 PB L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 4.42e-01 -0.0751 0.0973 0.481 PB L2
ENSG00000162607 USP1 774468 sc-eQTL 1.65e-01 0.135 0.0963 0.481 PB L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 8.69e-01 0.0177 0.107 0.481 PB L2
ENSG00000079739 PGM1 -382646 sc-eQTL 3.92e-01 0.0672 0.0783 0.461 Pro_T L2
ENSG00000088035 ALG6 -156810 sc-eQTL 8.76e-02 0.136 0.0792 0.461 Pro_T L2
ENSG00000116641 DOCK7 522379 sc-eQTL 9.70e-01 0.00305 0.0801 0.461 Pro_T L2
ENSG00000125703 ATG4C 426633 sc-eQTL 8.59e-01 -0.0125 0.0701 0.461 Pro_T L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 1.87e-01 -0.0928 0.07 0.461 Pro_T L2
ENSG00000162607 USP1 774468 sc-eQTL 4.62e-01 -0.0356 0.0483 0.461 Pro_T L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 6.36e-01 -0.0387 0.0817 0.461 Pro_T L2
ENSG00000079739 PGM1 -382646 sc-eQTL 7.29e-02 -0.15 0.083 0.459 Treg L2
ENSG00000088035 ALG6 -156810 sc-eQTL 5.37e-01 0.0552 0.0894 0.459 Treg L2
ENSG00000116641 DOCK7 522379 sc-eQTL 4.64e-01 -0.0602 0.082 0.459 Treg L2
ENSG00000125703 ATG4C 426633 sc-eQTL 6.12e-01 0.0426 0.0838 0.459 Treg L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 7.80e-01 0.0246 0.0878 0.459 Treg L2
ENSG00000162607 USP1 774468 sc-eQTL 8.59e-01 -0.0151 0.0849 0.459 Treg L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 9.72e-01 -0.00294 0.084 0.459 Treg L2
ENSG00000079739 PGM1 -382646 sc-eQTL 9.79e-01 0.00222 0.0833 0.459 cDC L2
ENSG00000088035 ALG6 -156810 sc-eQTL 2.79e-01 -0.0914 0.0842 0.459 cDC L2
ENSG00000116641 DOCK7 522379 sc-eQTL 6.77e-02 -0.151 0.0822 0.459 cDC L2
ENSG00000125703 ATG4C 426633 sc-eQTL 1.55e-01 -0.102 0.0716 0.459 cDC L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 2.51e-01 0.105 0.0909 0.459 cDC L2
ENSG00000162607 USP1 774468 sc-eQTL 7.49e-01 -0.0261 0.0812 0.459 cDC L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 5.80e-01 -0.0406 0.0733 0.459 cDC L2
ENSG00000079739 PGM1 -382646 sc-eQTL 6.46e-01 0.0356 0.0774 0.459 cMono_IL1B L2
ENSG00000088035 ALG6 -156810 sc-eQTL 2.40e-01 0.091 0.0773 0.459 cMono_IL1B L2
ENSG00000116641 DOCK7 522379 sc-eQTL 6.51e-01 -0.037 0.0817 0.459 cMono_IL1B L2
ENSG00000125703 ATG4C 426633 sc-eQTL 9.94e-01 -0.000416 0.0575 0.459 cMono_IL1B L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 3.94e-01 -0.0695 0.0813 0.459 cMono_IL1B L2
ENSG00000162607 USP1 774468 sc-eQTL 9.03e-01 -0.00879 0.0718 0.459 cMono_IL1B L2
ENSG00000079739 PGM1 -382646 sc-eQTL 5.39e-01 -0.0533 0.0867 0.459 cMono_S100A L2
ENSG00000088035 ALG6 -156810 sc-eQTL 1.92e-01 -0.115 0.0876 0.459 cMono_S100A L2
ENSG00000116641 DOCK7 522379 sc-eQTL 9.27e-01 0.00749 0.0815 0.459 cMono_S100A L2
ENSG00000125703 ATG4C 426633 sc-eQTL 1.41e-01 -0.104 0.0702 0.459 cMono_S100A L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 2.31e-02 -0.18 0.0787 0.459 cMono_S100A L2
ENSG00000162607 USP1 774468 sc-eQTL 5.06e-02 -0.16 0.0812 0.459 cMono_S100A L2
ENSG00000079739 PGM1 -382646 sc-eQTL 4.83e-01 0.0694 0.0986 0.424 gdT L2
ENSG00000088035 ALG6 -156810 sc-eQTL 1.77e-01 0.142 0.105 0.424 gdT L2
ENSG00000116641 DOCK7 522379 sc-eQTL 9.38e-01 0.008 0.103 0.424 gdT L2
ENSG00000125703 ATG4C 426633 sc-eQTL 3.46e-02 0.207 0.0971 0.424 gdT L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 3.26e-01 0.103 0.104 0.424 gdT L2
ENSG00000162607 USP1 774468 sc-eQTL 9.66e-01 0.00427 0.0992 0.424 gdT L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 7.11e-01 -0.0383 0.103 0.424 gdT L2
ENSG00000079739 PGM1 -382646 sc-eQTL 8.65e-01 0.0146 0.0859 0.456 intMono L2
ENSG00000088035 ALG6 -156810 sc-eQTL 4.98e-01 0.0543 0.0799 0.456 intMono L2
ENSG00000116641 DOCK7 522379 sc-eQTL 9.41e-01 0.00601 0.0817 0.456 intMono L2
ENSG00000125703 ATG4C 426633 sc-eQTL 4.35e-01 0.061 0.0779 0.456 intMono L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 2.17e-01 -0.106 0.0856 0.456 intMono L2
ENSG00000162607 USP1 774468 sc-eQTL 9.36e-01 0.007 0.0874 0.456 intMono L2
ENSG00000079739 PGM1 -382646 sc-eQTL 8.66e-01 -0.0133 0.0785 0.464 ncMono L2
ENSG00000088035 ALG6 -156810 sc-eQTL 2.96e-01 0.0901 0.086 0.464 ncMono L2
ENSG00000116641 DOCK7 522379 sc-eQTL 6.53e-01 -0.0382 0.0848 0.464 ncMono L2
ENSG00000125703 ATG4C 426633 sc-eQTL 3.40e-01 -0.0757 0.0791 0.464 ncMono L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 6.92e-01 -0.0329 0.0829 0.464 ncMono L2
ENSG00000162607 USP1 774468 sc-eQTL 1.13e-01 0.134 0.0842 0.464 ncMono L2
ENSG00000079739 PGM1 -382646 sc-eQTL 9.30e-01 0.00843 0.0965 0.438 pDC L2
ENSG00000088035 ALG6 -156810 sc-eQTL 1.95e-01 0.122 0.0934 0.438 pDC L2
ENSG00000116641 DOCK7 522379 sc-eQTL 2.19e-01 -0.118 0.0955 0.438 pDC L2
ENSG00000125703 ATG4C 426633 sc-eQTL 8.73e-01 0.0138 0.0861 0.438 pDC L2
ENSG00000142856 ITGB3BP -382956 sc-eQTL 1.14e-01 -0.152 0.0959 0.438 pDC L2
ENSG00000162607 USP1 774468 sc-eQTL 8.70e-01 0.0161 0.0985 0.438 pDC L2
ENSG00000203965 EFCAB7 -312607 sc-eQTL 9.26e-01 -0.00798 0.0855 0.438 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -382646 sc-eQTL 4.46e-01 0.0611 0.0801 0.459 B_Memory LOneK1K
ENSG00000088035 ALG6 -156810 sc-eQTL 3.48e-01 0.0832 0.0885 0.459 B_Memory LOneK1K
ENSG00000116641 DOCK7 522379 sc-eQTL 2.33e-01 0.0917 0.0767 0.459 B_Memory LOneK1K
ENSG00000125703 ATG4C 426633 sc-eQTL 2.08e-01 -0.0783 0.062 0.459 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -382956 sc-eQTL 1.54e-01 -0.116 0.0813 0.459 B_Memory LOneK1K
ENSG00000162607 USP1 774468 sc-eQTL 8.96e-01 0.0104 0.0794 0.459 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -312607 sc-eQTL 3.91e-01 -0.0731 0.085 0.459 B_Memory LOneK1K
ENSG00000079739 PGM1 -382646 sc-eQTL 2.33e-01 0.1 0.0839 0.459 B_Naive LOneK1K
ENSG00000088035 ALG6 -156810 sc-eQTL 4.19e-01 0.0701 0.0866 0.459 B_Naive LOneK1K
ENSG00000116641 DOCK7 522379 sc-eQTL 1.39e-01 -0.12 0.0806 0.459 B_Naive LOneK1K
ENSG00000125703 ATG4C 426633 sc-eQTL 2.69e-01 -0.0684 0.0616 0.459 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -382956 sc-eQTL 8.51e-01 -0.0164 0.0874 0.459 B_Naive LOneK1K
ENSG00000162607 USP1 774468 sc-eQTL 9.96e-01 -0.000356 0.0751 0.459 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -312607 sc-eQTL 6.17e-01 -0.044 0.0878 0.459 B_Naive LOneK1K
ENSG00000079739 PGM1 -382646 sc-eQTL 8.18e-01 -0.0183 0.0794 0.459 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -156810 sc-eQTL 5.67e-01 0.044 0.0768 0.459 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 522379 sc-eQTL 7.08e-01 -0.029 0.0774 0.459 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 426633 sc-eQTL 2.68e-01 -0.0592 0.0533 0.459 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -382956 sc-eQTL 8.74e-02 -0.135 0.0786 0.459 CD14_Mono LOneK1K
ENSG00000162607 USP1 774468 sc-eQTL 2.54e-01 -0.0771 0.0674 0.459 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -382646 sc-eQTL 4.45e-01 0.0576 0.0753 0.461 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -156810 sc-eQTL 3.58e-01 0.0787 0.0854 0.461 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 522379 sc-eQTL 6.49e-01 -0.0386 0.0847 0.461 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 426633 sc-eQTL 4.80e-01 -0.0511 0.0721 0.461 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -382956 sc-eQTL 3.37e-01 -0.0804 0.0837 0.461 CD16_Mono LOneK1K
ENSG00000162607 USP1 774468 sc-eQTL 5.82e-02 0.149 0.0781 0.461 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -382646 sc-eQTL 1.59e-01 -0.0902 0.0638 0.461 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -156810 sc-eQTL 9.71e-01 0.00285 0.077 0.461 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 522379 sc-eQTL 8.67e-01 -0.0116 0.0689 0.461 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 426633 sc-eQTL 8.37e-01 0.0141 0.0688 0.461 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -382956 sc-eQTL 3.80e-01 -0.0716 0.0814 0.461 NK_CD56dim LOneK1K
ENSG00000162607 USP1 774468 sc-eQTL 5.65e-01 0.0426 0.074 0.461 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -312607 sc-eQTL 4.79e-01 -0.0638 0.09 0.461 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -382646 eQTL 0.00111 0.0573 0.0175 0.0 0.0 0.414
ENSG00000142856 ITGB3BP -382956 eQTL 0.049 -0.0568 0.0288 0.0 0.0 0.414

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -382646 9.39e-07 5.74e-07 1.07e-07 3.87e-07 9.86e-08 2.01e-07 5.8e-07 1.45e-07 5.02e-07 2.39e-07 7.67e-07 3.84e-07 9.1e-07 1.34e-07 2.26e-07 2.69e-07 3.24e-07 4.07e-07 2.13e-07 1.63e-07 1.97e-07 3.92e-07 3.84e-07 1.94e-07 8.62e-07 2.54e-07 2.62e-07 2.68e-07 4.15e-07 6.42e-07 3.56e-07 7.12e-08 4.42e-08 1.52e-07 3e-07 1.18e-07 1.08e-07 8.21e-08 6.72e-08 2.65e-08 1.02e-07 6.19e-07 2.75e-08 1.89e-08 1.45e-07 1.91e-08 8.84e-08 3.25e-09 4.71e-08