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Genes within 1Mb (chr1:63186568:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -406843 sc-eQTL 4.90e-01 0.0549 0.0795 0.306 B L1
ENSG00000088035 ALG6 -181007 sc-eQTL 6.99e-01 0.0319 0.0825 0.306 B L1
ENSG00000116641 DOCK7 498182 sc-eQTL 6.92e-01 0.0327 0.0825 0.306 B L1
ENSG00000125703 ATG4C 402436 sc-eQTL 5.13e-01 0.0375 0.0573 0.306 B L1
ENSG00000142856 ITGB3BP -407153 sc-eQTL 4.92e-02 -0.179 0.0904 0.306 B L1
ENSG00000162607 USP1 750271 sc-eQTL 4.10e-01 -0.0653 0.0791 0.306 B L1
ENSG00000203965 EFCAB7 -336804 sc-eQTL 5.71e-02 -0.177 0.0927 0.306 B L1
ENSG00000079739 PGM1 -406843 sc-eQTL 4.73e-01 0.0495 0.0688 0.306 CD4T L1
ENSG00000088035 ALG6 -181007 sc-eQTL 9.04e-01 0.0092 0.076 0.306 CD4T L1
ENSG00000116641 DOCK7 498182 sc-eQTL 8.81e-01 0.0115 0.0769 0.306 CD4T L1
ENSG00000125703 ATG4C 402436 sc-eQTL 8.84e-01 0.00905 0.0621 0.306 CD4T L1
ENSG00000142856 ITGB3BP -407153 sc-eQTL 1.14e-01 -0.139 0.0877 0.306 CD4T L1
ENSG00000162607 USP1 750271 sc-eQTL 4.74e-01 -0.0432 0.0602 0.306 CD4T L1
ENSG00000203965 EFCAB7 -336804 sc-eQTL 7.75e-01 -0.0226 0.0791 0.306 CD4T L1
ENSG00000079739 PGM1 -406843 sc-eQTL 5.60e-01 -0.044 0.0755 0.306 CD8T L1
ENSG00000088035 ALG6 -181007 sc-eQTL 8.58e-01 0.015 0.0833 0.306 CD8T L1
ENSG00000116641 DOCK7 498182 sc-eQTL 7.85e-01 -0.0231 0.0843 0.306 CD8T L1
ENSG00000125703 ATG4C 402436 sc-eQTL 2.87e-01 0.0853 0.0799 0.306 CD8T L1
ENSG00000142856 ITGB3BP -407153 sc-eQTL 6.10e-02 -0.167 0.0889 0.306 CD8T L1
ENSG00000162607 USP1 750271 sc-eQTL 7.30e-01 -0.0241 0.0698 0.306 CD8T L1
ENSG00000203965 EFCAB7 -336804 sc-eQTL 1.34e-01 -0.134 0.0889 0.306 CD8T L1
ENSG00000079739 PGM1 -406843 sc-eQTL 5.31e-01 -0.0518 0.0826 0.309 DC L1
ENSG00000088035 ALG6 -181007 sc-eQTL 4.45e-01 0.0652 0.0852 0.309 DC L1
ENSG00000116641 DOCK7 498182 sc-eQTL 1.41e-01 -0.128 0.0869 0.309 DC L1
ENSG00000125703 ATG4C 402436 sc-eQTL 4.06e-02 -0.14 0.0677 0.309 DC L1
ENSG00000142856 ITGB3BP -407153 sc-eQTL 7.35e-01 0.0325 0.0956 0.309 DC L1
ENSG00000162607 USP1 750271 sc-eQTL 9.08e-02 -0.141 0.0829 0.309 DC L1
ENSG00000203965 EFCAB7 -336804 sc-eQTL 6.02e-01 -0.0434 0.0832 0.309 DC L1
ENSG00000079739 PGM1 -406843 sc-eQTL 9.65e-01 0.0036 0.0813 0.306 Mono L1
ENSG00000088035 ALG6 -181007 sc-eQTL 7.21e-02 0.152 0.0842 0.306 Mono L1
ENSG00000116641 DOCK7 498182 sc-eQTL 2.95e-01 -0.086 0.0819 0.306 Mono L1
ENSG00000125703 ATG4C 402436 sc-eQTL 6.77e-01 -0.0232 0.0554 0.306 Mono L1
ENSG00000142856 ITGB3BP -407153 sc-eQTL 6.39e-02 -0.162 0.087 0.306 Mono L1
ENSG00000162607 USP1 750271 sc-eQTL 4.92e-01 -0.0495 0.0719 0.306 Mono L1
ENSG00000240563 L1TD1 991719 sc-eQTL 3.11e-01 -0.0681 0.067 0.306 Mono L1
ENSG00000079739 PGM1 -406843 sc-eQTL 4.83e-01 0.0495 0.0705 0.307 NK L1
ENSG00000088035 ALG6 -181007 sc-eQTL 6.38e-01 0.0389 0.0827 0.307 NK L1
ENSG00000116641 DOCK7 498182 sc-eQTL 9.39e-01 -0.0052 0.0681 0.307 NK L1
ENSG00000125703 ATG4C 402436 sc-eQTL 4.94e-01 0.05 0.0731 0.307 NK L1
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.23e-01 -0.111 0.0906 0.307 NK L1
ENSG00000162607 USP1 750271 sc-eQTL 4.88e-01 -0.0564 0.0812 0.307 NK L1
ENSG00000203965 EFCAB7 -336804 sc-eQTL 6.95e-01 -0.0388 0.0987 0.307 NK L1
ENSG00000079739 PGM1 -406843 sc-eQTL 3.83e-01 0.0702 0.0804 0.306 Other_T L1
ENSG00000088035 ALG6 -181007 sc-eQTL 4.48e-01 0.0614 0.0808 0.306 Other_T L1
ENSG00000116641 DOCK7 498182 sc-eQTL 3.86e-01 0.0717 0.0824 0.306 Other_T L1
ENSG00000125703 ATG4C 402436 sc-eQTL 1.73e-01 0.0974 0.0712 0.306 Other_T L1
ENSG00000142856 ITGB3BP -407153 sc-eQTL 5.05e-01 0.0423 0.0633 0.306 Other_T L1
ENSG00000162607 USP1 750271 sc-eQTL 9.62e-01 -0.00259 0.055 0.306 Other_T L1
ENSG00000203965 EFCAB7 -336804 sc-eQTL 9.04e-01 0.0118 0.0978 0.306 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -406843 sc-eQTL 9.87e-01 0.0017 0.104 0.301 B_Activated L2
ENSG00000088035 ALG6 -181007 sc-eQTL 5.64e-01 -0.0576 0.0996 0.301 B_Activated L2
ENSG00000116641 DOCK7 498182 sc-eQTL 7.72e-01 -0.0269 0.0928 0.301 B_Activated L2
ENSG00000125703 ATG4C 402436 sc-eQTL 5.71e-01 0.0554 0.0976 0.301 B_Activated L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 5.88e-03 -0.26 0.0933 0.301 B_Activated L2
ENSG00000162607 USP1 750271 sc-eQTL 7.57e-02 -0.183 0.102 0.301 B_Activated L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 2.43e-01 -0.105 0.09 0.301 B_Activated L2
ENSG00000079739 PGM1 -406843 sc-eQTL 9.15e-01 0.0102 0.0953 0.305 B_Intermediate L2
ENSG00000088035 ALG6 -181007 sc-eQTL 1.94e-01 -0.126 0.0964 0.305 B_Intermediate L2
ENSG00000116641 DOCK7 498182 sc-eQTL 2.04e-01 0.118 0.0921 0.305 B_Intermediate L2
ENSG00000125703 ATG4C 402436 sc-eQTL 4.05e-01 -0.0652 0.0781 0.305 B_Intermediate L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 1.44e-01 -0.136 0.0928 0.305 B_Intermediate L2
ENSG00000162607 USP1 750271 sc-eQTL 5.10e-01 -0.0614 0.093 0.305 B_Intermediate L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 7.96e-01 -0.024 0.0924 0.305 B_Intermediate L2
ENSG00000079739 PGM1 -406843 sc-eQTL 2.65e-01 0.105 0.0938 0.306 B_Memory L2
ENSG00000088035 ALG6 -181007 sc-eQTL 2.28e-02 0.217 0.0945 0.306 B_Memory L2
ENSG00000116641 DOCK7 498182 sc-eQTL 6.01e-01 0.047 0.0897 0.306 B_Memory L2
ENSG00000125703 ATG4C 402436 sc-eQTL 3.38e-01 -0.0816 0.0851 0.306 B_Memory L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 3.95e-02 -0.2 0.0966 0.306 B_Memory L2
ENSG00000162607 USP1 750271 sc-eQTL 5.86e-01 0.0536 0.0984 0.306 B_Memory L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 4.00e-01 -0.0815 0.0967 0.306 B_Memory L2
ENSG00000079739 PGM1 -406843 sc-eQTL 1.72e-01 0.129 0.0944 0.306 B_Naive1 L2
ENSG00000088035 ALG6 -181007 sc-eQTL 7.25e-01 0.0335 0.0952 0.306 B_Naive1 L2
ENSG00000116641 DOCK7 498182 sc-eQTL 3.77e-01 -0.0806 0.0911 0.306 B_Naive1 L2
ENSG00000125703 ATG4C 402436 sc-eQTL 8.46e-01 -0.0137 0.0703 0.306 B_Naive1 L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 4.65e-02 -0.185 0.0924 0.306 B_Naive1 L2
ENSG00000162607 USP1 750271 sc-eQTL 8.54e-01 -0.0151 0.082 0.306 B_Naive1 L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 7.55e-02 -0.176 0.0987 0.306 B_Naive1 L2
ENSG00000079739 PGM1 -406843 sc-eQTL 8.89e-01 0.013 0.0932 0.307 B_Naive2 L2
ENSG00000088035 ALG6 -181007 sc-eQTL 8.94e-01 -0.013 0.0971 0.307 B_Naive2 L2
ENSG00000116641 DOCK7 498182 sc-eQTL 8.79e-01 -0.0143 0.0934 0.307 B_Naive2 L2
ENSG00000125703 ATG4C 402436 sc-eQTL 9.20e-01 0.00908 0.0899 0.307 B_Naive2 L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 7.29e-01 -0.0338 0.0975 0.307 B_Naive2 L2
ENSG00000162607 USP1 750271 sc-eQTL 3.61e-01 -0.0849 0.0926 0.307 B_Naive2 L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 2.17e-01 0.12 0.0967 0.307 B_Naive2 L2
ENSG00000079739 PGM1 -406843 sc-eQTL 7.61e-01 -0.0285 0.0936 0.302 CD4_CTL L2
ENSG00000088035 ALG6 -181007 sc-eQTL 8.21e-01 0.0224 0.0989 0.302 CD4_CTL L2
ENSG00000116641 DOCK7 498182 sc-eQTL 3.64e-01 -0.0786 0.0863 0.302 CD4_CTL L2
ENSG00000125703 ATG4C 402436 sc-eQTL 1.21e-01 -0.139 0.089 0.302 CD4_CTL L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 6.54e-01 -0.0429 0.0957 0.302 CD4_CTL L2
ENSG00000162607 USP1 750271 sc-eQTL 1.23e-01 -0.14 0.0906 0.302 CD4_CTL L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 9.63e-01 -0.00421 0.091 0.302 CD4_CTL L2
ENSG00000079739 PGM1 -406843 sc-eQTL 1.97e-01 0.1 0.0772 0.306 CD4_Naive L2
ENSG00000088035 ALG6 -181007 sc-eQTL 7.44e-01 -0.0275 0.0842 0.306 CD4_Naive L2
ENSG00000116641 DOCK7 498182 sc-eQTL 3.51e-01 0.0772 0.0826 0.306 CD4_Naive L2
ENSG00000125703 ATG4C 402436 sc-eQTL 4.97e-01 0.0497 0.0731 0.306 CD4_Naive L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.70e-01 -0.0986 0.0891 0.306 CD4_Naive L2
ENSG00000162607 USP1 750271 sc-eQTL 9.72e-01 -0.0024 0.0683 0.306 CD4_Naive L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 9.78e-01 -0.00248 0.0887 0.306 CD4_Naive L2
ENSG00000079739 PGM1 -406843 sc-eQTL 6.70e-01 0.034 0.0797 0.306 CD4_TCM L2
ENSG00000088035 ALG6 -181007 sc-eQTL 6.94e-01 0.0364 0.0925 0.306 CD4_TCM L2
ENSG00000116641 DOCK7 498182 sc-eQTL 2.63e-01 -0.0918 0.0818 0.306 CD4_TCM L2
ENSG00000125703 ATG4C 402436 sc-eQTL 7.39e-01 -0.0266 0.0798 0.306 CD4_TCM L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 1.53e-01 -0.134 0.0937 0.306 CD4_TCM L2
ENSG00000162607 USP1 750271 sc-eQTL 4.05e-01 -0.0643 0.0771 0.306 CD4_TCM L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 2.06e-01 -0.115 0.0907 0.306 CD4_TCM L2
ENSG00000079739 PGM1 -406843 sc-eQTL 8.45e-01 -0.0184 0.0937 0.306 CD4_TEM L2
ENSG00000088035 ALG6 -181007 sc-eQTL 1.90e-01 0.123 0.0938 0.306 CD4_TEM L2
ENSG00000116641 DOCK7 498182 sc-eQTL 4.14e-01 -0.0751 0.0917 0.306 CD4_TEM L2
ENSG00000125703 ATG4C 402436 sc-eQTL 6.42e-02 0.165 0.0885 0.306 CD4_TEM L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 1.27e-01 -0.14 0.0916 0.306 CD4_TEM L2
ENSG00000162607 USP1 750271 sc-eQTL 2.38e-01 -0.103 0.0869 0.306 CD4_TEM L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 9.12e-01 -0.0106 0.0954 0.306 CD4_TEM L2
ENSG00000079739 PGM1 -406843 sc-eQTL 5.19e-01 -0.0553 0.0855 0.306 CD8_CTL L2
ENSG00000088035 ALG6 -181007 sc-eQTL 7.52e-01 -0.0288 0.091 0.306 CD8_CTL L2
ENSG00000116641 DOCK7 498182 sc-eQTL 6.79e-01 -0.0357 0.0863 0.306 CD8_CTL L2
ENSG00000125703 ATG4C 402436 sc-eQTL 3.47e-01 0.0865 0.0917 0.306 CD8_CTL L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 9.28e-01 -0.0087 0.0955 0.306 CD8_CTL L2
ENSG00000162607 USP1 750271 sc-eQTL 1.52e-01 0.123 0.0852 0.306 CD8_CTL L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 4.42e-01 -0.0753 0.0977 0.306 CD8_CTL L2
ENSG00000079739 PGM1 -406843 sc-eQTL 3.98e-01 -0.074 0.0875 0.306 CD8_Naive L2
ENSG00000088035 ALG6 -181007 sc-eQTL 4.39e-01 0.0702 0.0906 0.306 CD8_Naive L2
ENSG00000116641 DOCK7 498182 sc-eQTL 6.65e-01 -0.0406 0.0937 0.306 CD8_Naive L2
ENSG00000125703 ATG4C 402436 sc-eQTL 4.57e-01 -0.067 0.0899 0.306 CD8_Naive L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 8.43e-03 -0.238 0.0897 0.306 CD8_Naive L2
ENSG00000162607 USP1 750271 sc-eQTL 3.21e-01 -0.0765 0.0769 0.306 CD8_Naive L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 4.64e-02 -0.171 0.0851 0.306 CD8_Naive L2
ENSG00000079739 PGM1 -406843 sc-eQTL 4.91e-01 -0.0651 0.0944 0.303 CD8_TCM L2
ENSG00000088035 ALG6 -181007 sc-eQTL 4.01e-01 -0.0805 0.0956 0.303 CD8_TCM L2
ENSG00000116641 DOCK7 498182 sc-eQTL 1.61e-01 0.131 0.0929 0.303 CD8_TCM L2
ENSG00000125703 ATG4C 402436 sc-eQTL 9.66e-01 0.00405 0.0956 0.303 CD8_TCM L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.95e-01 -0.0973 0.0926 0.303 CD8_TCM L2
ENSG00000162607 USP1 750271 sc-eQTL 4.74e-01 -0.064 0.0892 0.303 CD8_TCM L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 5.79e-01 -0.0526 0.0946 0.303 CD8_TCM L2
ENSG00000079739 PGM1 -406843 sc-eQTL 8.29e-01 0.0208 0.0963 0.306 CD8_TEM L2
ENSG00000088035 ALG6 -181007 sc-eQTL 3.22e-01 0.0957 0.0964 0.306 CD8_TEM L2
ENSG00000116641 DOCK7 498182 sc-eQTL 9.51e-01 -0.00575 0.0937 0.306 CD8_TEM L2
ENSG00000125703 ATG4C 402436 sc-eQTL 8.54e-01 -0.0166 0.0901 0.306 CD8_TEM L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 6.15e-01 0.0491 0.0975 0.306 CD8_TEM L2
ENSG00000162607 USP1 750271 sc-eQTL 6.78e-01 0.0387 0.093 0.306 CD8_TEM L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 2.52e-01 0.108 0.0943 0.306 CD8_TEM L2
ENSG00000079739 PGM1 -406843 sc-eQTL 2.72e-01 0.102 0.0924 0.303 MAIT L2
ENSG00000088035 ALG6 -181007 sc-eQTL 5.74e-01 0.0516 0.0916 0.303 MAIT L2
ENSG00000116641 DOCK7 498182 sc-eQTL 2.48e-01 0.101 0.0876 0.303 MAIT L2
ENSG00000125703 ATG4C 402436 sc-eQTL 1.20e-01 0.144 0.0921 0.303 MAIT L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 9.71e-01 0.0034 0.0928 0.303 MAIT L2
ENSG00000162607 USP1 750271 sc-eQTL 7.02e-01 -0.0353 0.092 0.303 MAIT L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 1.85e-01 0.127 0.0951 0.303 MAIT L2
ENSG00000079739 PGM1 -406843 sc-eQTL 4.35e-01 -0.0723 0.0925 0.311 NK_CD56bright L2
ENSG00000088035 ALG6 -181007 sc-eQTL 7.35e-01 0.0322 0.095 0.311 NK_CD56bright L2
ENSG00000116641 DOCK7 498182 sc-eQTL 9.58e-01 -0.00438 0.0823 0.311 NK_CD56bright L2
ENSG00000125703 ATG4C 402436 sc-eQTL 3.61e-01 0.084 0.0918 0.311 NK_CD56bright L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 5.26e-01 -0.0608 0.0956 0.311 NK_CD56bright L2
ENSG00000162607 USP1 750271 sc-eQTL 1.07e-01 -0.159 0.0981 0.311 NK_CD56bright L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 9.57e-01 0.00509 0.0944 0.311 NK_CD56bright L2
ENSG00000079739 PGM1 -406843 sc-eQTL 2.90e-01 0.0777 0.0732 0.308 NK_CD56dim L2
ENSG00000088035 ALG6 -181007 sc-eQTL 7.38e-01 0.0312 0.0931 0.308 NK_CD56dim L2
ENSG00000116641 DOCK7 498182 sc-eQTL 8.03e-01 0.0203 0.081 0.308 NK_CD56dim L2
ENSG00000125703 ATG4C 402436 sc-eQTL 1.76e-01 0.111 0.082 0.308 NK_CD56dim L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.69e-01 -0.104 0.0934 0.308 NK_CD56dim L2
ENSG00000162607 USP1 750271 sc-eQTL 7.56e-01 -0.0283 0.0908 0.308 NK_CD56dim L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 5.22e-01 -0.0648 0.101 0.308 NK_CD56dim L2
ENSG00000079739 PGM1 -406843 sc-eQTL 7.81e-01 -0.0278 0.0999 0.311 NK_HLA L2
ENSG00000088035 ALG6 -181007 sc-eQTL 2.84e-01 0.111 0.103 0.311 NK_HLA L2
ENSG00000116641 DOCK7 498182 sc-eQTL 7.18e-01 0.0287 0.0792 0.311 NK_HLA L2
ENSG00000125703 ATG4C 402436 sc-eQTL 5.74e-01 -0.0518 0.0921 0.311 NK_HLA L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 4.52e-01 -0.0728 0.0966 0.311 NK_HLA L2
ENSG00000162607 USP1 750271 sc-eQTL 4.46e-01 0.0772 0.101 0.311 NK_HLA L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 9.30e-01 -0.00815 0.0922 0.311 NK_HLA L2
ENSG00000079739 PGM1 -406843 sc-eQTL 6.98e-02 0.143 0.0787 0.308 NK_cytokine L2
ENSG00000088035 ALG6 -181007 sc-eQTL 8.07e-01 -0.0219 0.0896 0.308 NK_cytokine L2
ENSG00000116641 DOCK7 498182 sc-eQTL 8.70e-01 -0.0136 0.083 0.308 NK_cytokine L2
ENSG00000125703 ATG4C 402436 sc-eQTL 6.66e-01 0.0367 0.0849 0.308 NK_cytokine L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 1.37e-01 -0.131 0.0875 0.308 NK_cytokine L2
ENSG00000162607 USP1 750271 sc-eQTL 5.50e-01 0.0554 0.0924 0.308 NK_cytokine L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 5.98e-01 0.0495 0.0937 0.308 NK_cytokine L2
ENSG00000079739 PGM1 -406843 sc-eQTL 5.74e-01 -0.062 0.11 0.307 PB L2
ENSG00000088035 ALG6 -181007 sc-eQTL 2.92e-02 0.25 0.113 0.307 PB L2
ENSG00000116641 DOCK7 498182 sc-eQTL 9.64e-01 -0.00556 0.124 0.307 PB L2
ENSG00000125703 ATG4C 402436 sc-eQTL 1.76e-01 0.146 0.107 0.307 PB L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 8.54e-01 -0.0199 0.108 0.307 PB L2
ENSG00000162607 USP1 750271 sc-eQTL 5.80e-01 0.0594 0.107 0.307 PB L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 6.80e-01 -0.0488 0.118 0.307 PB L2
ENSG00000079739 PGM1 -406843 sc-eQTL 4.74e-01 -0.0613 0.0855 0.304 Pro_T L2
ENSG00000088035 ALG6 -181007 sc-eQTL 5.59e-01 0.0509 0.087 0.304 Pro_T L2
ENSG00000116641 DOCK7 498182 sc-eQTL 6.37e-01 -0.0413 0.0873 0.304 Pro_T L2
ENSG00000125703 ATG4C 402436 sc-eQTL 1.51e-01 -0.11 0.0761 0.304 Pro_T L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 6.85e-01 -0.0312 0.0767 0.304 Pro_T L2
ENSG00000162607 USP1 750271 sc-eQTL 7.70e-01 -0.0155 0.0527 0.304 Pro_T L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 4.98e-01 -0.0605 0.089 0.304 Pro_T L2
ENSG00000079739 PGM1 -406843 sc-eQTL 1.25e-01 -0.139 0.0899 0.306 Treg L2
ENSG00000088035 ALG6 -181007 sc-eQTL 8.81e-01 -0.0145 0.0967 0.306 Treg L2
ENSG00000116641 DOCK7 498182 sc-eQTL 8.54e-01 -0.0164 0.0888 0.306 Treg L2
ENSG00000125703 ATG4C 402436 sc-eQTL 2.10e-01 0.114 0.0904 0.306 Treg L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 6.37e-01 -0.0448 0.0948 0.306 Treg L2
ENSG00000162607 USP1 750271 sc-eQTL 9.16e-01 -0.00973 0.0918 0.306 Treg L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 3.36e-02 -0.192 0.0898 0.306 Treg L2
ENSG00000079739 PGM1 -406843 sc-eQTL 6.81e-01 0.0374 0.0906 0.312 cDC L2
ENSG00000088035 ALG6 -181007 sc-eQTL 3.53e-01 -0.0854 0.0917 0.312 cDC L2
ENSG00000116641 DOCK7 498182 sc-eQTL 6.00e-02 -0.169 0.0893 0.312 cDC L2
ENSG00000125703 ATG4C 402436 sc-eQTL 4.87e-02 -0.154 0.0775 0.312 cDC L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 3.89e-01 0.0855 0.0991 0.312 cDC L2
ENSG00000162607 USP1 750271 sc-eQTL 2.79e-01 -0.0957 0.0881 0.312 cDC L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 4.19e-01 -0.0645 0.0796 0.312 cDC L2
ENSG00000079739 PGM1 -406843 sc-eQTL 6.47e-01 0.0386 0.0843 0.306 cMono_IL1B L2
ENSG00000088035 ALG6 -181007 sc-eQTL 1.15e-01 0.133 0.0839 0.306 cMono_IL1B L2
ENSG00000116641 DOCK7 498182 sc-eQTL 9.64e-01 -0.00405 0.089 0.306 cMono_IL1B L2
ENSG00000125703 ATG4C 402436 sc-eQTL 4.91e-01 0.0431 0.0625 0.306 cMono_IL1B L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.96e-01 -0.0927 0.0884 0.306 cMono_IL1B L2
ENSG00000162607 USP1 750271 sc-eQTL 4.45e-01 -0.0598 0.0781 0.306 cMono_IL1B L2
ENSG00000240563 L1TD1 991719 sc-eQTL 1.11e-01 -0.125 0.0781 0.306 cMono_IL1B L2
ENSG00000079739 PGM1 -406843 sc-eQTL 8.28e-01 -0.0204 0.0938 0.306 cMono_S100A L2
ENSG00000088035 ALG6 -181007 sc-eQTL 8.53e-01 0.0176 0.095 0.306 cMono_S100A L2
ENSG00000116641 DOCK7 498182 sc-eQTL 8.66e-01 0.0149 0.0881 0.306 cMono_S100A L2
ENSG00000125703 ATG4C 402436 sc-eQTL 2.14e-01 -0.0948 0.076 0.306 cMono_S100A L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.67e-02 -0.19 0.0851 0.306 cMono_S100A L2
ENSG00000162607 USP1 750271 sc-eQTL 6.84e-02 -0.161 0.0879 0.306 cMono_S100A L2
ENSG00000240563 L1TD1 991719 sc-eQTL 9.15e-01 -0.00784 0.0737 0.306 cMono_S100A L2
ENSG00000079739 PGM1 -406843 sc-eQTL 1.81e-01 0.141 0.105 0.297 gdT L2
ENSG00000088035 ALG6 -181007 sc-eQTL 9.96e-02 0.184 0.111 0.297 gdT L2
ENSG00000116641 DOCK7 498182 sc-eQTL 7.27e-01 0.0385 0.11 0.297 gdT L2
ENSG00000125703 ATG4C 402436 sc-eQTL 3.03e-01 0.108 0.105 0.297 gdT L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.39e-01 0.132 0.111 0.297 gdT L2
ENSG00000162607 USP1 750271 sc-eQTL 8.27e-01 0.0231 0.106 0.297 gdT L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 3.21e-01 -0.109 0.11 0.297 gdT L2
ENSG00000079739 PGM1 -406843 sc-eQTL 6.31e-01 0.0453 0.0941 0.309 intMono L2
ENSG00000088035 ALG6 -181007 sc-eQTL 5.62e-01 0.0509 0.0876 0.309 intMono L2
ENSG00000116641 DOCK7 498182 sc-eQTL 9.65e-01 -0.0039 0.0895 0.309 intMono L2
ENSG00000125703 ATG4C 402436 sc-eQTL 6.13e-01 0.0433 0.0854 0.309 intMono L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 2.63e-01 -0.105 0.0939 0.309 intMono L2
ENSG00000162607 USP1 750271 sc-eQTL 7.74e-02 -0.169 0.095 0.309 intMono L2
ENSG00000240563 L1TD1 991719 sc-eQTL 4.16e-01 0.0574 0.0703 0.309 intMono L2
ENSG00000079739 PGM1 -406843 sc-eQTL 4.92e-01 -0.0583 0.0847 0.31 ncMono L2
ENSG00000088035 ALG6 -181007 sc-eQTL 6.51e-01 0.0422 0.0931 0.31 ncMono L2
ENSG00000116641 DOCK7 498182 sc-eQTL 3.50e-01 -0.0857 0.0914 0.31 ncMono L2
ENSG00000125703 ATG4C 402436 sc-eQTL 3.87e-01 -0.0741 0.0854 0.31 ncMono L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 9.60e-01 0.00445 0.0895 0.31 ncMono L2
ENSG00000162607 USP1 750271 sc-eQTL 1.92e-01 0.119 0.0911 0.31 ncMono L2
ENSG00000240563 L1TD1 991719 sc-eQTL 5.25e-01 -0.0413 0.0648 0.31 ncMono L2
ENSG00000079739 PGM1 -406843 sc-eQTL 5.41e-01 0.0647 0.106 0.28 pDC L2
ENSG00000088035 ALG6 -181007 sc-eQTL 1.86e-01 0.136 0.102 0.28 pDC L2
ENSG00000116641 DOCK7 498182 sc-eQTL 6.06e-01 -0.0544 0.105 0.28 pDC L2
ENSG00000125703 ATG4C 402436 sc-eQTL 7.91e-01 -0.025 0.0943 0.28 pDC L2
ENSG00000142856 ITGB3BP -407153 sc-eQTL 5.89e-01 -0.0573 0.106 0.28 pDC L2
ENSG00000162607 USP1 750271 sc-eQTL 9.99e-01 6.97e-05 0.108 0.28 pDC L2
ENSG00000203965 EFCAB7 -336804 sc-eQTL 1.94e-01 -0.121 0.0932 0.28 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -406843 sc-eQTL 6.18e-01 -0.0445 0.0892 0.306 B_Memory LOneK1K
ENSG00000088035 ALG6 -181007 sc-eQTL 9.49e-01 -0.0063 0.0986 0.306 B_Memory LOneK1K
ENSG00000116641 DOCK7 498182 sc-eQTL 2.79e-01 0.0926 0.0854 0.306 B_Memory LOneK1K
ENSG00000125703 ATG4C 402436 sc-eQTL 4.70e-01 -0.05 0.0691 0.306 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -407153 sc-eQTL 8.05e-03 -0.239 0.0894 0.306 B_Memory LOneK1K
ENSG00000162607 USP1 750271 sc-eQTL 7.38e-01 -0.0295 0.0883 0.306 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -336804 sc-eQTL 1.23e-01 -0.146 0.0942 0.306 B_Memory LOneK1K
ENSG00000079739 PGM1 -406843 sc-eQTL 2.63e-01 0.103 0.0919 0.306 B_Naive LOneK1K
ENSG00000088035 ALG6 -181007 sc-eQTL 8.41e-01 0.0191 0.0949 0.306 B_Naive LOneK1K
ENSG00000116641 DOCK7 498182 sc-eQTL 3.25e-01 -0.0872 0.0884 0.306 B_Naive LOneK1K
ENSG00000125703 ATG4C 402436 sc-eQTL 8.95e-01 -0.00895 0.0676 0.306 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -407153 sc-eQTL 1.04e-01 -0.155 0.095 0.306 B_Naive LOneK1K
ENSG00000162607 USP1 750271 sc-eQTL 9.07e-01 -0.00957 0.0821 0.306 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -336804 sc-eQTL 3.66e-01 -0.0868 0.0959 0.306 B_Naive LOneK1K
ENSG00000079739 PGM1 -406843 sc-eQTL 9.23e-01 0.00832 0.0861 0.306 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -181007 sc-eQTL 1.14e-01 0.131 0.0829 0.306 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 498182 sc-eQTL 9.94e-01 0.000627 0.084 0.306 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 402436 sc-eQTL 6.67e-01 -0.025 0.058 0.306 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -407153 sc-eQTL 5.10e-02 -0.167 0.0851 0.306 CD14_Mono LOneK1K
ENSG00000162607 USP1 750271 sc-eQTL 9.97e-02 -0.121 0.0729 0.306 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 991719 sc-eQTL 3.09e-01 -0.0809 0.0794 0.306 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -406843 sc-eQTL 7.48e-01 -0.0264 0.0819 0.308 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -181007 sc-eQTL 4.62e-01 0.0685 0.093 0.308 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 498182 sc-eQTL 2.82e-01 -0.0991 0.0918 0.308 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 402436 sc-eQTL 4.54e-01 -0.0588 0.0784 0.308 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -407153 sc-eQTL 5.86e-01 -0.0497 0.0911 0.308 CD16_Mono LOneK1K
ENSG00000162607 USP1 750271 sc-eQTL 5.29e-01 0.0539 0.0856 0.308 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 991719 sc-eQTL 9.29e-01 -0.00522 0.0584 0.308 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -406843 sc-eQTL 4.20e-01 0.0578 0.0715 0.308 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -181007 sc-eQTL 6.19e-01 0.0428 0.086 0.308 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 498182 sc-eQTL 7.98e-01 0.0198 0.0771 0.308 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 402436 sc-eQTL 4.20e-01 0.0621 0.0768 0.308 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -407153 sc-eQTL 1.86e-01 -0.121 0.0908 0.308 NK_CD56dim LOneK1K
ENSG00000162607 USP1 750271 sc-eQTL 9.13e-01 0.00902 0.0828 0.308 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -336804 sc-eQTL 4.56e-01 -0.0752 0.101 0.308 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -406843 eQTL 0.00023 0.0694 0.0188 0.00119 0.0 0.294
ENSG00000142856 ITGB3BP -407153 eQTL 0.0248 -0.0696 0.0309 0.0 0.0 0.294
ENSG00000162607 USP1 750271 eQTL 0.0447 0.0273 0.0136 0.00116 0.0 0.294

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -406843 1.27e-06 8.72e-07 2.7e-07 3.38e-07 2.1e-07 4.11e-07 9.92e-07 2.88e-07 9.89e-07 3.24e-07 1.25e-06 5.68e-07 1.46e-06 2.33e-07 4.6e-07 5.49e-07 7.78e-07 5.67e-07 3.71e-07 4.38e-07 2.97e-07 8.11e-07 6.11e-07 4.66e-07 1.71e-06 2.55e-07 6.16e-07 4.92e-07 8.24e-07 9.58e-07 4.48e-07 3.75e-08 1.7e-07 3.51e-07 3.67e-07 3.05e-07 2.46e-07 1.59e-07 1.24e-07 4.17e-08 3.17e-07 1.19e-06 6.53e-08 1.93e-08 2.01e-07 6.12e-08 1.76e-07 8.66e-08 5.84e-08