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Genes within 1Mb (chr1:63172634:T:TGAG):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -420777 sc-eQTL 8.24e-01 0.0184 0.0824 0.694 B L1
ENSG00000088035 ALG6 -194941 sc-eQTL 9.27e-01 0.0078 0.0854 0.694 B L1
ENSG00000116641 DOCK7 484248 sc-eQTL 5.27e-01 0.054 0.0853 0.694 B L1
ENSG00000125703 ATG4C 388502 sc-eQTL 2.30e-01 0.0713 0.0592 0.694 B L1
ENSG00000142856 ITGB3BP -421087 sc-eQTL 2.29e-01 -0.114 0.0942 0.694 B L1
ENSG00000162607 USP1 736337 sc-eQTL 1.99e-01 -0.105 0.0817 0.694 B L1
ENSG00000203965 EFCAB7 -350738 sc-eQTL 1.35e-01 -0.145 0.0963 0.694 B L1
ENSG00000079739 PGM1 -420777 sc-eQTL 5.24e-01 0.0442 0.0692 0.694 CD4T L1
ENSG00000088035 ALG6 -194941 sc-eQTL 9.84e-01 0.00157 0.0765 0.694 CD4T L1
ENSG00000116641 DOCK7 484248 sc-eQTL 5.69e-01 0.0441 0.0773 0.694 CD4T L1
ENSG00000125703 ATG4C 388502 sc-eQTL 2.48e-01 0.0722 0.0623 0.694 CD4T L1
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.89e-02 -0.174 0.0879 0.694 CD4T L1
ENSG00000162607 USP1 736337 sc-eQTL 9.19e-01 -0.00617 0.0606 0.694 CD4T L1
ENSG00000203965 EFCAB7 -350738 sc-eQTL 4.28e-01 0.0632 0.0795 0.694 CD4T L1
ENSG00000079739 PGM1 -420777 sc-eQTL 8.69e-01 -0.0127 0.0768 0.694 CD8T L1
ENSG00000088035 ALG6 -194941 sc-eQTL 7.86e-01 -0.023 0.0846 0.694 CD8T L1
ENSG00000116641 DOCK7 484248 sc-eQTL 5.53e-01 0.051 0.0857 0.694 CD8T L1
ENSG00000125703 ATG4C 388502 sc-eQTL 7.21e-02 0.146 0.0808 0.694 CD8T L1
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.75e-01 -0.0651 0.091 0.694 CD8T L1
ENSG00000162607 USP1 736337 sc-eQTL 1.29e-01 -0.108 0.0706 0.694 CD8T L1
ENSG00000203965 EFCAB7 -350738 sc-eQTL 1.90e-01 -0.119 0.0904 0.694 CD8T L1
ENSG00000079739 PGM1 -420777 sc-eQTL 1.39e-01 0.126 0.085 0.696 DC L1
ENSG00000088035 ALG6 -194941 sc-eQTL 1.63e-01 0.123 0.0878 0.696 DC L1
ENSG00000116641 DOCK7 484248 sc-eQTL 8.90e-01 -0.0125 0.0904 0.696 DC L1
ENSG00000125703 ATG4C 388502 sc-eQTL 9.09e-01 -0.0081 0.0708 0.696 DC L1
ENSG00000142856 ITGB3BP -421087 sc-eQTL 5.44e-02 -0.19 0.098 0.696 DC L1
ENSG00000162607 USP1 736337 sc-eQTL 1.06e-02 -0.219 0.085 0.696 DC L1
ENSG00000203965 EFCAB7 -350738 sc-eQTL 4.35e-01 0.0673 0.086 0.696 DC L1
ENSG00000079739 PGM1 -420777 sc-eQTL 5.76e-01 -0.0466 0.0832 0.694 Mono L1
ENSG00000088035 ALG6 -194941 sc-eQTL 2.11e-01 0.109 0.0865 0.694 Mono L1
ENSG00000116641 DOCK7 484248 sc-eQTL 3.70e-01 -0.0753 0.0838 0.694 Mono L1
ENSG00000125703 ATG4C 388502 sc-eQTL 4.74e-01 -0.0407 0.0567 0.694 Mono L1
ENSG00000142856 ITGB3BP -421087 sc-eQTL 8.07e-01 -0.0219 0.0897 0.694 Mono L1
ENSG00000162607 USP1 736337 sc-eQTL 4.60e-01 -0.0545 0.0736 0.694 Mono L1
ENSG00000240563 L1TD1 977785 sc-eQTL 4.39e-01 0.0532 0.0687 0.694 Mono L1
ENSG00000079739 PGM1 -420777 sc-eQTL 7.48e-01 0.0233 0.0724 0.695 NK L1
ENSG00000088035 ALG6 -194941 sc-eQTL 9.64e-01 0.00385 0.0849 0.695 NK L1
ENSG00000116641 DOCK7 484248 sc-eQTL 3.62e-01 -0.0637 0.0698 0.695 NK L1
ENSG00000125703 ATG4C 388502 sc-eQTL 5.16e-01 0.0487 0.075 0.695 NK L1
ENSG00000142856 ITGB3BP -421087 sc-eQTL 3.89e-01 0.0805 0.0932 0.695 NK L1
ENSG00000162607 USP1 736337 sc-eQTL 9.70e-01 -0.00311 0.0834 0.695 NK L1
ENSG00000203965 EFCAB7 -350738 sc-eQTL 9.09e-01 -0.0115 0.101 0.695 NK L1
ENSG00000079739 PGM1 -420777 sc-eQTL 7.34e-01 0.0277 0.0815 0.694 Other_T L1
ENSG00000088035 ALG6 -194941 sc-eQTL 7.61e-01 -0.0249 0.0818 0.694 Other_T L1
ENSG00000116641 DOCK7 484248 sc-eQTL 7.81e-01 0.0233 0.0836 0.694 Other_T L1
ENSG00000125703 ATG4C 388502 sc-eQTL 2.82e-02 0.158 0.0715 0.694 Other_T L1
ENSG00000142856 ITGB3BP -421087 sc-eQTL 3.96e-01 0.0545 0.0641 0.694 Other_T L1
ENSG00000162607 USP1 736337 sc-eQTL 4.91e-01 -0.0383 0.0556 0.694 Other_T L1
ENSG00000203965 EFCAB7 -350738 sc-eQTL 1.42e-01 -0.145 0.0985 0.694 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -420777 sc-eQTL 6.31e-01 0.051 0.106 0.684 B_Activated L2
ENSG00000088035 ALG6 -194941 sc-eQTL 7.51e-01 -0.0323 0.102 0.684 B_Activated L2
ENSG00000116641 DOCK7 484248 sc-eQTL 3.88e-01 -0.0818 0.0945 0.684 B_Activated L2
ENSG00000125703 ATG4C 388502 sc-eQTL 6.80e-01 -0.0411 0.0995 0.684 B_Activated L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 3.54e-01 -0.0901 0.0971 0.684 B_Activated L2
ENSG00000162607 USP1 736337 sc-eQTL 2.91e-01 0.111 0.105 0.684 B_Activated L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 2.79e-01 -0.0997 0.0918 0.684 B_Activated L2
ENSG00000079739 PGM1 -420777 sc-eQTL 3.36e-01 -0.0949 0.0984 0.695 B_Intermediate L2
ENSG00000088035 ALG6 -194941 sc-eQTL 1.27e-01 -0.153 0.0996 0.695 B_Intermediate L2
ENSG00000116641 DOCK7 484248 sc-eQTL 9.29e-01 0.00857 0.0957 0.695 B_Intermediate L2
ENSG00000125703 ATG4C 388502 sc-eQTL 9.29e-01 -0.00718 0.081 0.695 B_Intermediate L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.23e-01 -0.0773 0.0964 0.695 B_Intermediate L2
ENSG00000162607 USP1 736337 sc-eQTL 6.16e-01 -0.0484 0.0963 0.695 B_Intermediate L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 2.92e-01 -0.101 0.0953 0.695 B_Intermediate L2
ENSG00000079739 PGM1 -420777 sc-eQTL 8.77e-01 -0.0152 0.0982 0.7 B_Memory L2
ENSG00000088035 ALG6 -194941 sc-eQTL 7.37e-01 -0.0335 0.0998 0.7 B_Memory L2
ENSG00000116641 DOCK7 484248 sc-eQTL 2.43e-01 0.109 0.0934 0.7 B_Memory L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.54e-01 -0.0667 0.0889 0.7 B_Memory L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 2.68e-01 -0.113 0.102 0.7 B_Memory L2
ENSG00000162607 USP1 736337 sc-eQTL 2.34e-01 -0.122 0.102 0.7 B_Memory L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 4.58e-01 0.075 0.101 0.7 B_Memory L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.85e-01 0.129 0.0973 0.694 B_Naive1 L2
ENSG00000088035 ALG6 -194941 sc-eQTL 8.63e-01 0.017 0.0981 0.694 B_Naive1 L2
ENSG00000116641 DOCK7 484248 sc-eQTL 9.06e-01 0.0111 0.094 0.694 B_Naive1 L2
ENSG00000125703 ATG4C 388502 sc-eQTL 1.29e-02 0.179 0.0714 0.694 B_Naive1 L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 3.40e-01 -0.0917 0.0959 0.694 B_Naive1 L2
ENSG00000162607 USP1 736337 sc-eQTL 8.36e-01 0.0175 0.0845 0.694 B_Naive1 L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 3.57e-02 -0.214 0.101 0.694 B_Naive1 L2
ENSG00000079739 PGM1 -420777 sc-eQTL 4.14e-01 0.0789 0.0963 0.697 B_Naive2 L2
ENSG00000088035 ALG6 -194941 sc-eQTL 3.11e-01 0.102 0.1 0.697 B_Naive2 L2
ENSG00000116641 DOCK7 484248 sc-eQTL 9.00e-01 -0.0122 0.0967 0.697 B_Naive2 L2
ENSG00000125703 ATG4C 388502 sc-eQTL 7.81e-01 0.026 0.093 0.697 B_Naive2 L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.22e-01 -0.0811 0.101 0.697 B_Naive2 L2
ENSG00000162607 USP1 736337 sc-eQTL 4.26e-02 -0.194 0.0951 0.697 B_Naive2 L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 7.41e-01 -0.0332 0.1 0.697 B_Naive2 L2
ENSG00000079739 PGM1 -420777 sc-eQTL 7.89e-02 0.17 0.0964 0.695 CD4_CTL L2
ENSG00000088035 ALG6 -194941 sc-eQTL 3.09e-01 -0.105 0.102 0.695 CD4_CTL L2
ENSG00000116641 DOCK7 484248 sc-eQTL 5.81e-01 -0.0496 0.0897 0.695 CD4_CTL L2
ENSG00000125703 ATG4C 388502 sc-eQTL 3.52e-01 -0.0866 0.0927 0.695 CD4_CTL L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 2.48e-02 -0.222 0.0981 0.695 CD4_CTL L2
ENSG00000162607 USP1 736337 sc-eQTL 4.94e-01 0.0648 0.0945 0.695 CD4_CTL L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 4.47e-01 0.0719 0.0943 0.695 CD4_CTL L2
ENSG00000079739 PGM1 -420777 sc-eQTL 2.51e-01 0.0893 0.0777 0.694 CD4_Naive L2
ENSG00000088035 ALG6 -194941 sc-eQTL 4.68e-01 0.0614 0.0845 0.694 CD4_Naive L2
ENSG00000116641 DOCK7 484248 sc-eQTL 1.44e-01 0.121 0.0827 0.694 CD4_Naive L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.51e-01 0.0555 0.0734 0.694 CD4_Naive L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 1.86e-01 -0.119 0.0895 0.694 CD4_Naive L2
ENSG00000162607 USP1 736337 sc-eQTL 8.19e-01 0.0158 0.0686 0.694 CD4_Naive L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 3.70e-01 0.0799 0.089 0.694 CD4_Naive L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.82e-01 -0.108 0.0805 0.694 CD4_TCM L2
ENSG00000088035 ALG6 -194941 sc-eQTL 5.96e-01 -0.0498 0.0938 0.694 CD4_TCM L2
ENSG00000116641 DOCK7 484248 sc-eQTL 1.98e-01 -0.107 0.0829 0.694 CD4_TCM L2
ENSG00000125703 ATG4C 388502 sc-eQTL 8.31e-02 0.14 0.0804 0.694 CD4_TCM L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 1.39e-01 -0.141 0.095 0.694 CD4_TCM L2
ENSG00000162607 USP1 736337 sc-eQTL 1.78e-01 -0.105 0.078 0.694 CD4_TCM L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 9.58e-01 -0.00483 0.0924 0.694 CD4_TCM L2
ENSG00000079739 PGM1 -420777 sc-eQTL 3.29e-01 0.0935 0.0955 0.694 CD4_TEM L2
ENSG00000088035 ALG6 -194941 sc-eQTL 5.31e-01 0.0603 0.0961 0.694 CD4_TEM L2
ENSG00000116641 DOCK7 484248 sc-eQTL 9.13e-01 -0.0102 0.0938 0.694 CD4_TEM L2
ENSG00000125703 ATG4C 388502 sc-eQTL 2.29e-01 0.109 0.0908 0.694 CD4_TEM L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 2.22e-02 -0.214 0.0928 0.694 CD4_TEM L2
ENSG00000162607 USP1 736337 sc-eQTL 6.54e-01 -0.0399 0.089 0.694 CD4_TEM L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 4.81e-01 0.0686 0.0973 0.694 CD4_TEM L2
ENSG00000079739 PGM1 -420777 sc-eQTL 7.20e-01 0.0318 0.0886 0.694 CD8_CTL L2
ENSG00000088035 ALG6 -194941 sc-eQTL 4.64e-01 -0.0691 0.0941 0.694 CD8_CTL L2
ENSG00000116641 DOCK7 484248 sc-eQTL 7.64e-01 0.0268 0.0894 0.694 CD8_CTL L2
ENSG00000125703 ATG4C 388502 sc-eQTL 9.68e-01 -0.00377 0.0952 0.694 CD8_CTL L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 7.45e-01 -0.0323 0.0989 0.694 CD8_CTL L2
ENSG00000162607 USP1 736337 sc-eQTL 4.17e-01 -0.0719 0.0885 0.694 CD8_CTL L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 8.45e-01 -0.0198 0.101 0.694 CD8_CTL L2
ENSG00000079739 PGM1 -420777 sc-eQTL 4.71e-01 -0.0639 0.0885 0.694 CD8_Naive L2
ENSG00000088035 ALG6 -194941 sc-eQTL 3.18e-02 0.196 0.0907 0.694 CD8_Naive L2
ENSG00000116641 DOCK7 484248 sc-eQTL 5.30e-01 0.0596 0.0947 0.694 CD8_Naive L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.86e-01 0.0635 0.0909 0.694 CD8_Naive L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 8.58e-02 -0.158 0.0915 0.694 CD8_Naive L2
ENSG00000162607 USP1 736337 sc-eQTL 2.99e-01 -0.0809 0.0777 0.694 CD8_Naive L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 4.72e-01 -0.0625 0.0868 0.694 CD8_Naive L2
ENSG00000079739 PGM1 -420777 sc-eQTL 7.21e-01 0.0344 0.0963 0.69 CD8_TCM L2
ENSG00000088035 ALG6 -194941 sc-eQTL 3.46e-01 0.092 0.0973 0.69 CD8_TCM L2
ENSG00000116641 DOCK7 484248 sc-eQTL 1.65e-01 0.132 0.0947 0.69 CD8_TCM L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.05e-01 0.0811 0.0972 0.69 CD8_TCM L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 6.22e-01 -0.0467 0.0945 0.69 CD8_TCM L2
ENSG00000162607 USP1 736337 sc-eQTL 2.49e-01 -0.105 0.0907 0.69 CD8_TCM L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 5.68e-01 -0.0552 0.0963 0.69 CD8_TCM L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.81e-01 -0.133 0.0992 0.696 CD8_TEM L2
ENSG00000088035 ALG6 -194941 sc-eQTL 6.32e-01 -0.048 0.1 0.696 CD8_TEM L2
ENSG00000116641 DOCK7 484248 sc-eQTL 9.08e-01 0.0113 0.097 0.696 CD8_TEM L2
ENSG00000125703 ATG4C 388502 sc-eQTL 6.88e-01 0.0375 0.0932 0.696 CD8_TEM L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 8.53e-01 -0.0188 0.101 0.696 CD8_TEM L2
ENSG00000162607 USP1 736337 sc-eQTL 4.68e-01 -0.0699 0.0962 0.696 CD8_TEM L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 8.13e-02 -0.17 0.0971 0.696 CD8_TEM L2
ENSG00000079739 PGM1 -420777 sc-eQTL 9.14e-01 -0.0101 0.094 0.695 MAIT L2
ENSG00000088035 ALG6 -194941 sc-eQTL 6.26e-01 -0.0454 0.093 0.695 MAIT L2
ENSG00000116641 DOCK7 484248 sc-eQTL 2.95e-01 0.0933 0.0889 0.695 MAIT L2
ENSG00000125703 ATG4C 388502 sc-eQTL 1.75e-02 0.222 0.0928 0.695 MAIT L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.79e-01 -0.0667 0.0941 0.695 MAIT L2
ENSG00000162607 USP1 736337 sc-eQTL 3.08e-01 -0.0953 0.0932 0.695 MAIT L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 8.17e-01 0.0224 0.097 0.695 MAIT L2
ENSG00000079739 PGM1 -420777 sc-eQTL 6.96e-01 0.0368 0.094 0.7 NK_CD56bright L2
ENSG00000088035 ALG6 -194941 sc-eQTL 5.35e-01 -0.0598 0.0963 0.7 NK_CD56bright L2
ENSG00000116641 DOCK7 484248 sc-eQTL 6.92e-01 -0.0332 0.0835 0.7 NK_CD56bright L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.57e-01 0.0695 0.0932 0.7 NK_CD56bright L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 7.68e-01 0.0287 0.0972 0.7 NK_CD56bright L2
ENSG00000162607 USP1 736337 sc-eQTL 2.57e-01 0.114 0.0999 0.7 NK_CD56bright L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 9.71e-01 -0.00353 0.0959 0.7 NK_CD56bright L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.88e-01 0.0994 0.0753 0.698 NK_CD56dim L2
ENSG00000088035 ALG6 -194941 sc-eQTL 3.24e-01 -0.0946 0.0957 0.698 NK_CD56dim L2
ENSG00000116641 DOCK7 484248 sc-eQTL 2.61e-01 -0.0938 0.0832 0.698 NK_CD56dim L2
ENSG00000125703 ATG4C 388502 sc-eQTL 3.02e-01 0.0876 0.0846 0.698 NK_CD56dim L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.87e-01 0.0671 0.0963 0.698 NK_CD56dim L2
ENSG00000162607 USP1 736337 sc-eQTL 9.64e-01 -0.00424 0.0936 0.698 NK_CD56dim L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 7.44e-01 0.034 0.104 0.698 NK_CD56dim L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.44e-01 -0.15 0.102 0.703 NK_HLA L2
ENSG00000088035 ALG6 -194941 sc-eQTL 1.99e-01 0.137 0.106 0.703 NK_HLA L2
ENSG00000116641 DOCK7 484248 sc-eQTL 9.44e-01 0.00572 0.0814 0.703 NK_HLA L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.81e-01 0.0668 0.0945 0.703 NK_HLA L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 9.27e-01 -0.00907 0.0994 0.703 NK_HLA L2
ENSG00000162607 USP1 736337 sc-eQTL 8.83e-02 0.177 0.103 0.703 NK_HLA L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 8.90e-01 0.0131 0.0946 0.703 NK_HLA L2
ENSG00000079739 PGM1 -420777 sc-eQTL 5.47e-01 0.0494 0.0819 0.698 NK_cytokine L2
ENSG00000088035 ALG6 -194941 sc-eQTL 9.46e-01 0.00624 0.0926 0.698 NK_cytokine L2
ENSG00000116641 DOCK7 484248 sc-eQTL 5.23e-01 0.0549 0.0857 0.698 NK_cytokine L2
ENSG00000125703 ATG4C 388502 sc-eQTL 1.47e-01 0.127 0.0873 0.698 NK_cytokine L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.88e-01 -0.063 0.0908 0.698 NK_cytokine L2
ENSG00000162607 USP1 736337 sc-eQTL 8.92e-01 -0.0129 0.0955 0.698 NK_cytokine L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 8.67e-01 -0.0162 0.0968 0.698 NK_cytokine L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.54e-01 -0.162 0.113 0.674 PB L2
ENSG00000088035 ALG6 -194941 sc-eQTL 6.82e-01 0.0491 0.12 0.674 PB L2
ENSG00000116641 DOCK7 484248 sc-eQTL 5.08e-01 -0.0848 0.128 0.674 PB L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.35e-02 0.224 0.11 0.674 PB L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 3.72e-01 0.0995 0.111 0.674 PB L2
ENSG00000162607 USP1 736337 sc-eQTL 4.73e-01 0.0798 0.111 0.674 PB L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 6.24e-01 -0.0602 0.122 0.674 PB L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.45e-01 -0.128 0.0872 0.691 Pro_T L2
ENSG00000088035 ALG6 -194941 sc-eQTL 4.46e-01 -0.0679 0.089 0.691 Pro_T L2
ENSG00000116641 DOCK7 484248 sc-eQTL 2.76e-01 -0.0974 0.0892 0.691 Pro_T L2
ENSG00000125703 ATG4C 388502 sc-eQTL 7.29e-01 0.0272 0.0783 0.691 Pro_T L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 2.53e-01 0.0897 0.0783 0.691 Pro_T L2
ENSG00000162607 USP1 736337 sc-eQTL 5.18e-01 0.035 0.054 0.691 Pro_T L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 8.89e-01 -0.0128 0.0913 0.691 Pro_T L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.96e-01 -0.12 0.0922 0.694 Treg L2
ENSG00000088035 ALG6 -194941 sc-eQTL 6.88e-01 -0.0398 0.0989 0.694 Treg L2
ENSG00000116641 DOCK7 484248 sc-eQTL 4.40e-01 -0.0702 0.0907 0.694 Treg L2
ENSG00000125703 ATG4C 388502 sc-eQTL 7.47e-01 -0.03 0.0928 0.694 Treg L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 3.39e-01 -0.0928 0.0969 0.694 Treg L2
ENSG00000162607 USP1 736337 sc-eQTL 2.87e-01 -0.1 0.0937 0.694 Treg L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 3.34e-01 -0.0898 0.0927 0.694 Treg L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.57e-01 0.133 0.0932 0.702 cDC L2
ENSG00000088035 ALG6 -194941 sc-eQTL 2.73e-01 0.104 0.0947 0.702 cDC L2
ENSG00000116641 DOCK7 484248 sc-eQTL 6.35e-01 -0.0443 0.0932 0.702 cDC L2
ENSG00000125703 ATG4C 388502 sc-eQTL 8.13e-01 -0.0192 0.081 0.702 cDC L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 8.24e-01 -0.0229 0.103 0.702 cDC L2
ENSG00000162607 USP1 736337 sc-eQTL 1.92e-01 -0.119 0.091 0.702 cDC L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 9.06e-01 -0.00977 0.0825 0.702 cDC L2
ENSG00000079739 PGM1 -420777 sc-eQTL 3.55e-01 -0.0801 0.0865 0.694 cMono_IL1B L2
ENSG00000088035 ALG6 -194941 sc-eQTL 6.99e-01 -0.0336 0.0867 0.694 cMono_IL1B L2
ENSG00000116641 DOCK7 484248 sc-eQTL 5.96e-01 0.0486 0.0914 0.694 cMono_IL1B L2
ENSG00000125703 ATG4C 388502 sc-eQTL 6.94e-01 0.0253 0.0643 0.694 cMono_IL1B L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 6.82e-01 0.0373 0.091 0.694 cMono_IL1B L2
ENSG00000162607 USP1 736337 sc-eQTL 7.86e-02 -0.141 0.0798 0.694 cMono_IL1B L2
ENSG00000240563 L1TD1 977785 sc-eQTL 5.24e-01 0.0514 0.0806 0.694 cMono_IL1B L2
ENSG00000079739 PGM1 -420777 sc-eQTL 9.87e-01 -0.00154 0.0961 0.694 cMono_S100A L2
ENSG00000088035 ALG6 -194941 sc-eQTL 8.13e-02 0.169 0.0967 0.694 cMono_S100A L2
ENSG00000116641 DOCK7 484248 sc-eQTL 3.25e-01 -0.0888 0.0901 0.694 cMono_S100A L2
ENSG00000125703 ATG4C 388502 sc-eQTL 3.76e-01 -0.0693 0.078 0.694 cMono_S100A L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 3.38e-01 -0.0845 0.088 0.694 cMono_S100A L2
ENSG00000162607 USP1 736337 sc-eQTL 7.72e-01 -0.0263 0.0908 0.694 cMono_S100A L2
ENSG00000240563 L1TD1 977785 sc-eQTL 2.90e-01 0.0799 0.0753 0.694 cMono_S100A L2
ENSG00000079739 PGM1 -420777 sc-eQTL 5.31e-01 -0.0687 0.109 0.718 gdT L2
ENSG00000088035 ALG6 -194941 sc-eQTL 3.22e-02 0.249 0.115 0.718 gdT L2
ENSG00000116641 DOCK7 484248 sc-eQTL 5.49e-01 0.0688 0.114 0.718 gdT L2
ENSG00000125703 ATG4C 388502 sc-eQTL 8.44e-01 -0.0215 0.109 0.718 gdT L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 9.88e-01 0.0018 0.116 0.718 gdT L2
ENSG00000162607 USP1 736337 sc-eQTL 1.44e-01 -0.16 0.109 0.718 gdT L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 1.09e-03 -0.367 0.11 0.718 gdT L2
ENSG00000079739 PGM1 -420777 sc-eQTL 1.83e-01 -0.131 0.098 0.7 intMono L2
ENSG00000088035 ALG6 -194941 sc-eQTL 7.26e-01 -0.0321 0.0916 0.7 intMono L2
ENSG00000116641 DOCK7 484248 sc-eQTL 6.68e-01 0.0402 0.0936 0.7 intMono L2
ENSG00000125703 ATG4C 388502 sc-eQTL 2.86e-01 -0.0954 0.0891 0.7 intMono L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 4.83e-01 -0.0692 0.0983 0.7 intMono L2
ENSG00000162607 USP1 736337 sc-eQTL 4.20e-02 -0.203 0.0991 0.7 intMono L2
ENSG00000240563 L1TD1 977785 sc-eQTL 9.08e-01 -0.00853 0.0736 0.7 intMono L2
ENSG00000079739 PGM1 -420777 sc-eQTL 3.41e-01 0.0831 0.087 0.692 ncMono L2
ENSG00000088035 ALG6 -194941 sc-eQTL 6.87e-01 -0.0386 0.0957 0.692 ncMono L2
ENSG00000116641 DOCK7 484248 sc-eQTL 5.08e-01 -0.0624 0.0942 0.692 ncMono L2
ENSG00000125703 ATG4C 388502 sc-eQTL 3.22e-01 -0.0872 0.0878 0.692 ncMono L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 9.63e-01 -0.00424 0.0921 0.692 ncMono L2
ENSG00000162607 USP1 736337 sc-eQTL 5.39e-01 0.0578 0.094 0.692 ncMono L2
ENSG00000240563 L1TD1 977785 sc-eQTL 6.02e-01 -0.0349 0.0667 0.692 ncMono L2
ENSG00000079739 PGM1 -420777 sc-eQTL 6.26e-01 0.0534 0.109 0.692 pDC L2
ENSG00000088035 ALG6 -194941 sc-eQTL 8.56e-01 0.0193 0.107 0.692 pDC L2
ENSG00000116641 DOCK7 484248 sc-eQTL 4.87e-01 0.0757 0.109 0.692 pDC L2
ENSG00000125703 ATG4C 388502 sc-eQTL 4.01e-01 0.0822 0.0975 0.692 pDC L2
ENSG00000142856 ITGB3BP -421087 sc-eQTL 5.10e-01 -0.0723 0.11 0.692 pDC L2
ENSG00000162607 USP1 736337 sc-eQTL 1.58e-01 -0.158 0.111 0.692 pDC L2
ENSG00000203965 EFCAB7 -350738 sc-eQTL 6.04e-01 0.0504 0.097 0.692 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -420777 sc-eQTL 3.35e-01 -0.0884 0.0915 0.694 B_Memory LOneK1K
ENSG00000088035 ALG6 -194941 sc-eQTL 2.30e-01 -0.122 0.101 0.694 B_Memory LOneK1K
ENSG00000116641 DOCK7 484248 sc-eQTL 7.66e-01 -0.0263 0.088 0.694 B_Memory LOneK1K
ENSG00000125703 ATG4C 388502 sc-eQTL 1.82e-01 -0.0949 0.0709 0.694 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -421087 sc-eQTL 1.41e-01 -0.137 0.093 0.694 B_Memory LOneK1K
ENSG00000162607 USP1 736337 sc-eQTL 7.25e-01 -0.032 0.0908 0.694 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -350738 sc-eQTL 5.35e-01 -0.0604 0.0973 0.694 B_Memory LOneK1K
ENSG00000079739 PGM1 -420777 sc-eQTL 3.01e-01 0.0989 0.0954 0.694 B_Naive LOneK1K
ENSG00000088035 ALG6 -194941 sc-eQTL 4.44e-01 0.0755 0.0984 0.694 B_Naive LOneK1K
ENSG00000116641 DOCK7 484248 sc-eQTL 7.34e-01 0.0313 0.0919 0.694 B_Naive LOneK1K
ENSG00000125703 ATG4C 388502 sc-eQTL 7.50e-02 0.125 0.0697 0.694 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -421087 sc-eQTL 2.95e-01 -0.104 0.099 0.694 B_Naive LOneK1K
ENSG00000162607 USP1 736337 sc-eQTL 3.79e-01 -0.075 0.0851 0.694 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -350738 sc-eQTL 1.23e-01 -0.153 0.0992 0.694 B_Naive LOneK1K
ENSG00000079739 PGM1 -420777 sc-eQTL 7.41e-01 -0.0294 0.0887 0.694 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -194941 sc-eQTL 4.53e-01 0.0645 0.0858 0.694 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 484248 sc-eQTL 9.90e-01 0.00104 0.0865 0.694 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 388502 sc-eQTL 8.34e-01 -0.0125 0.0598 0.694 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -421087 sc-eQTL 9.36e-01 -0.00707 0.0885 0.694 CD14_Mono LOneK1K
ENSG00000162607 USP1 736337 sc-eQTL 1.92e-01 -0.0985 0.0753 0.694 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 977785 sc-eQTL 3.50e-01 0.0766 0.0818 0.694 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -420777 sc-eQTL 3.24e-01 -0.0834 0.0843 0.694 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -194941 sc-eQTL 9.52e-01 -0.00578 0.0959 0.694 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 484248 sc-eQTL 6.42e-01 -0.0442 0.0948 0.694 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 388502 sc-eQTL 2.46e-01 -0.0938 0.0806 0.694 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -421087 sc-eQTL 9.50e-01 -0.00588 0.0939 0.694 CD16_Mono LOneK1K
ENSG00000162607 USP1 736337 sc-eQTL 6.29e-01 -0.0427 0.0882 0.694 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 977785 sc-eQTL 9.57e-01 0.00327 0.0602 0.694 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -420777 sc-eQTL 7.18e-01 0.0267 0.0738 0.698 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -194941 sc-eQTL 9.76e-01 -0.00265 0.0886 0.698 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 484248 sc-eQTL 6.12e-01 -0.0403 0.0794 0.698 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 388502 sc-eQTL 3.51e-01 0.0739 0.0791 0.698 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -421087 sc-eQTL 7.98e-01 0.024 0.0939 0.698 NK_CD56dim LOneK1K
ENSG00000162607 USP1 736337 sc-eQTL 7.28e-01 -0.0297 0.0853 0.698 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -350738 sc-eQTL 9.87e-01 0.00163 0.104 0.698 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -420777 eQTL 0.0569 0.0373 0.0196 0.00453 0.0 0.278
ENSG00000116652 DLEU2L -374448 eQTL 0.0264 0.0632 0.0284 0.00152 0.0 0.278

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116652 DLEU2L -374448 2.95e-07 1.67e-07 6.57e-08 3.48e-07 1.03e-07 1.54e-07 2.24e-07 5.37e-08 1.98e-07 9.35e-08 1.59e-07 1.52e-07 4.11e-07 8.66e-08 6.18e-08 7.74e-08 3.98e-08 1.44e-07 9.69e-08 5.35e-08 1.27e-07 2.3e-07 2.04e-07 2.91e-08 1.63e-07 1.65e-07 1.2e-07 1.17e-07 1.31e-07 1.17e-07 1.14e-07 3.1e-08 3.74e-08 1.02e-07 4.78e-08 3.22e-08 1.05e-07 6.2e-08 6.58e-08 2.28e-08 3.27e-08 1.59e-07 4.7e-08 7.37e-07 4.67e-08 1.91e-08 1.11e-07 1.88e-09 5.02e-08
ENSG00000230798 \N -151807 1.89e-06 2.12e-06 4.68e-07 1.96e-06 7.65e-07 8e-07 1.3e-06 3.49e-07 1.95e-06 8.28e-07 1.99e-06 1.49e-06 4.69e-06 1.16e-06 3.88e-07 1.01e-06 8.49e-07 1.1e-06 9.64e-07 1.4e-06 8.63e-07 3.15e-06 3.06e-06 6.35e-07 2.35e-06 1.37e-06 1.17e-06 1.74e-06 1.8e-06 1.56e-06 7.67e-07 2.52e-07 3.25e-07 1.12e-06 9.89e-07 6.22e-07 9.14e-07 4.37e-07 1.18e-06 3.63e-07 4.44e-07 2.75e-06 5.53e-08 6.9e-07 2.96e-07 3.22e-07 3.64e-07 1.39e-07 1.74e-07