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Genes within 1Mb (chr1:63172485:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -420926 sc-eQTL 8.24e-01 0.0184 0.0824 0.694 B L1
ENSG00000088035 ALG6 -195090 sc-eQTL 9.27e-01 0.0078 0.0854 0.694 B L1
ENSG00000116641 DOCK7 484099 sc-eQTL 5.27e-01 0.054 0.0853 0.694 B L1
ENSG00000125703 ATG4C 388353 sc-eQTL 2.30e-01 0.0713 0.0592 0.694 B L1
ENSG00000142856 ITGB3BP -421236 sc-eQTL 2.29e-01 -0.114 0.0942 0.694 B L1
ENSG00000162607 USP1 736188 sc-eQTL 1.99e-01 -0.105 0.0817 0.694 B L1
ENSG00000203965 EFCAB7 -350887 sc-eQTL 1.35e-01 -0.145 0.0963 0.694 B L1
ENSG00000079739 PGM1 -420926 sc-eQTL 5.24e-01 0.0442 0.0692 0.694 CD4T L1
ENSG00000088035 ALG6 -195090 sc-eQTL 9.84e-01 0.00157 0.0765 0.694 CD4T L1
ENSG00000116641 DOCK7 484099 sc-eQTL 5.69e-01 0.0441 0.0773 0.694 CD4T L1
ENSG00000125703 ATG4C 388353 sc-eQTL 2.48e-01 0.0722 0.0623 0.694 CD4T L1
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.89e-02 -0.174 0.0879 0.694 CD4T L1
ENSG00000162607 USP1 736188 sc-eQTL 9.19e-01 -0.00617 0.0606 0.694 CD4T L1
ENSG00000203965 EFCAB7 -350887 sc-eQTL 4.28e-01 0.0632 0.0795 0.694 CD4T L1
ENSG00000079739 PGM1 -420926 sc-eQTL 8.69e-01 -0.0127 0.0768 0.694 CD8T L1
ENSG00000088035 ALG6 -195090 sc-eQTL 7.86e-01 -0.023 0.0846 0.694 CD8T L1
ENSG00000116641 DOCK7 484099 sc-eQTL 5.53e-01 0.051 0.0857 0.694 CD8T L1
ENSG00000125703 ATG4C 388353 sc-eQTL 7.21e-02 0.146 0.0808 0.694 CD8T L1
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.75e-01 -0.0651 0.091 0.694 CD8T L1
ENSG00000162607 USP1 736188 sc-eQTL 1.29e-01 -0.108 0.0706 0.694 CD8T L1
ENSG00000203965 EFCAB7 -350887 sc-eQTL 1.90e-01 -0.119 0.0904 0.694 CD8T L1
ENSG00000079739 PGM1 -420926 sc-eQTL 1.39e-01 0.126 0.085 0.696 DC L1
ENSG00000088035 ALG6 -195090 sc-eQTL 1.63e-01 0.123 0.0878 0.696 DC L1
ENSG00000116641 DOCK7 484099 sc-eQTL 8.90e-01 -0.0125 0.0904 0.696 DC L1
ENSG00000125703 ATG4C 388353 sc-eQTL 9.09e-01 -0.0081 0.0708 0.696 DC L1
ENSG00000142856 ITGB3BP -421236 sc-eQTL 5.44e-02 -0.19 0.098 0.696 DC L1
ENSG00000162607 USP1 736188 sc-eQTL 1.06e-02 -0.219 0.085 0.696 DC L1
ENSG00000203965 EFCAB7 -350887 sc-eQTL 4.35e-01 0.0673 0.086 0.696 DC L1
ENSG00000079739 PGM1 -420926 sc-eQTL 5.76e-01 -0.0466 0.0832 0.694 Mono L1
ENSG00000088035 ALG6 -195090 sc-eQTL 2.11e-01 0.109 0.0865 0.694 Mono L1
ENSG00000116641 DOCK7 484099 sc-eQTL 3.70e-01 -0.0753 0.0838 0.694 Mono L1
ENSG00000125703 ATG4C 388353 sc-eQTL 4.74e-01 -0.0407 0.0567 0.694 Mono L1
ENSG00000142856 ITGB3BP -421236 sc-eQTL 8.07e-01 -0.0219 0.0897 0.694 Mono L1
ENSG00000162607 USP1 736188 sc-eQTL 4.60e-01 -0.0545 0.0736 0.694 Mono L1
ENSG00000240563 L1TD1 977636 sc-eQTL 4.39e-01 0.0532 0.0687 0.694 Mono L1
ENSG00000079739 PGM1 -420926 sc-eQTL 7.48e-01 0.0233 0.0724 0.695 NK L1
ENSG00000088035 ALG6 -195090 sc-eQTL 9.64e-01 0.00385 0.0849 0.695 NK L1
ENSG00000116641 DOCK7 484099 sc-eQTL 3.62e-01 -0.0637 0.0698 0.695 NK L1
ENSG00000125703 ATG4C 388353 sc-eQTL 5.16e-01 0.0487 0.075 0.695 NK L1
ENSG00000142856 ITGB3BP -421236 sc-eQTL 3.89e-01 0.0805 0.0932 0.695 NK L1
ENSG00000162607 USP1 736188 sc-eQTL 9.70e-01 -0.00311 0.0834 0.695 NK L1
ENSG00000203965 EFCAB7 -350887 sc-eQTL 9.09e-01 -0.0115 0.101 0.695 NK L1
ENSG00000079739 PGM1 -420926 sc-eQTL 7.34e-01 0.0277 0.0815 0.694 Other_T L1
ENSG00000088035 ALG6 -195090 sc-eQTL 7.61e-01 -0.0249 0.0818 0.694 Other_T L1
ENSG00000116641 DOCK7 484099 sc-eQTL 7.81e-01 0.0233 0.0836 0.694 Other_T L1
ENSG00000125703 ATG4C 388353 sc-eQTL 2.82e-02 0.158 0.0715 0.694 Other_T L1
ENSG00000142856 ITGB3BP -421236 sc-eQTL 3.96e-01 0.0545 0.0641 0.694 Other_T L1
ENSG00000162607 USP1 736188 sc-eQTL 4.91e-01 -0.0383 0.0556 0.694 Other_T L1
ENSG00000203965 EFCAB7 -350887 sc-eQTL 1.42e-01 -0.145 0.0985 0.694 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -420926 sc-eQTL 6.31e-01 0.051 0.106 0.684 B_Activated L2
ENSG00000088035 ALG6 -195090 sc-eQTL 7.51e-01 -0.0323 0.102 0.684 B_Activated L2
ENSG00000116641 DOCK7 484099 sc-eQTL 3.88e-01 -0.0818 0.0945 0.684 B_Activated L2
ENSG00000125703 ATG4C 388353 sc-eQTL 6.80e-01 -0.0411 0.0995 0.684 B_Activated L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 3.54e-01 -0.0901 0.0971 0.684 B_Activated L2
ENSG00000162607 USP1 736188 sc-eQTL 2.91e-01 0.111 0.105 0.684 B_Activated L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 2.79e-01 -0.0997 0.0918 0.684 B_Activated L2
ENSG00000079739 PGM1 -420926 sc-eQTL 3.36e-01 -0.0949 0.0984 0.695 B_Intermediate L2
ENSG00000088035 ALG6 -195090 sc-eQTL 1.27e-01 -0.153 0.0996 0.695 B_Intermediate L2
ENSG00000116641 DOCK7 484099 sc-eQTL 9.29e-01 0.00857 0.0957 0.695 B_Intermediate L2
ENSG00000125703 ATG4C 388353 sc-eQTL 9.29e-01 -0.00718 0.081 0.695 B_Intermediate L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.23e-01 -0.0773 0.0964 0.695 B_Intermediate L2
ENSG00000162607 USP1 736188 sc-eQTL 6.16e-01 -0.0484 0.0963 0.695 B_Intermediate L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 2.92e-01 -0.101 0.0953 0.695 B_Intermediate L2
ENSG00000079739 PGM1 -420926 sc-eQTL 8.77e-01 -0.0152 0.0982 0.7 B_Memory L2
ENSG00000088035 ALG6 -195090 sc-eQTL 7.37e-01 -0.0335 0.0998 0.7 B_Memory L2
ENSG00000116641 DOCK7 484099 sc-eQTL 2.43e-01 0.109 0.0934 0.7 B_Memory L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.54e-01 -0.0667 0.0889 0.7 B_Memory L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 2.68e-01 -0.113 0.102 0.7 B_Memory L2
ENSG00000162607 USP1 736188 sc-eQTL 2.34e-01 -0.122 0.102 0.7 B_Memory L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 4.58e-01 0.075 0.101 0.7 B_Memory L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.85e-01 0.129 0.0973 0.694 B_Naive1 L2
ENSG00000088035 ALG6 -195090 sc-eQTL 8.63e-01 0.017 0.0981 0.694 B_Naive1 L2
ENSG00000116641 DOCK7 484099 sc-eQTL 9.06e-01 0.0111 0.094 0.694 B_Naive1 L2
ENSG00000125703 ATG4C 388353 sc-eQTL 1.29e-02 0.179 0.0714 0.694 B_Naive1 L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 3.40e-01 -0.0917 0.0959 0.694 B_Naive1 L2
ENSG00000162607 USP1 736188 sc-eQTL 8.36e-01 0.0175 0.0845 0.694 B_Naive1 L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 3.57e-02 -0.214 0.101 0.694 B_Naive1 L2
ENSG00000079739 PGM1 -420926 sc-eQTL 4.14e-01 0.0789 0.0963 0.697 B_Naive2 L2
ENSG00000088035 ALG6 -195090 sc-eQTL 3.11e-01 0.102 0.1 0.697 B_Naive2 L2
ENSG00000116641 DOCK7 484099 sc-eQTL 9.00e-01 -0.0122 0.0967 0.697 B_Naive2 L2
ENSG00000125703 ATG4C 388353 sc-eQTL 7.81e-01 0.026 0.093 0.697 B_Naive2 L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.22e-01 -0.0811 0.101 0.697 B_Naive2 L2
ENSG00000162607 USP1 736188 sc-eQTL 4.26e-02 -0.194 0.0951 0.697 B_Naive2 L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 7.41e-01 -0.0332 0.1 0.697 B_Naive2 L2
ENSG00000079739 PGM1 -420926 sc-eQTL 7.89e-02 0.17 0.0964 0.695 CD4_CTL L2
ENSG00000088035 ALG6 -195090 sc-eQTL 3.09e-01 -0.105 0.102 0.695 CD4_CTL L2
ENSG00000116641 DOCK7 484099 sc-eQTL 5.81e-01 -0.0496 0.0897 0.695 CD4_CTL L2
ENSG00000125703 ATG4C 388353 sc-eQTL 3.52e-01 -0.0866 0.0927 0.695 CD4_CTL L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 2.48e-02 -0.222 0.0981 0.695 CD4_CTL L2
ENSG00000162607 USP1 736188 sc-eQTL 4.94e-01 0.0648 0.0945 0.695 CD4_CTL L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 4.47e-01 0.0719 0.0943 0.695 CD4_CTL L2
ENSG00000079739 PGM1 -420926 sc-eQTL 2.51e-01 0.0893 0.0777 0.694 CD4_Naive L2
ENSG00000088035 ALG6 -195090 sc-eQTL 4.68e-01 0.0614 0.0845 0.694 CD4_Naive L2
ENSG00000116641 DOCK7 484099 sc-eQTL 1.44e-01 0.121 0.0827 0.694 CD4_Naive L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.51e-01 0.0555 0.0734 0.694 CD4_Naive L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 1.86e-01 -0.119 0.0895 0.694 CD4_Naive L2
ENSG00000162607 USP1 736188 sc-eQTL 8.19e-01 0.0158 0.0686 0.694 CD4_Naive L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 3.70e-01 0.0799 0.089 0.694 CD4_Naive L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.82e-01 -0.108 0.0805 0.694 CD4_TCM L2
ENSG00000088035 ALG6 -195090 sc-eQTL 5.96e-01 -0.0498 0.0938 0.694 CD4_TCM L2
ENSG00000116641 DOCK7 484099 sc-eQTL 1.98e-01 -0.107 0.0829 0.694 CD4_TCM L2
ENSG00000125703 ATG4C 388353 sc-eQTL 8.31e-02 0.14 0.0804 0.694 CD4_TCM L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 1.39e-01 -0.141 0.095 0.694 CD4_TCM L2
ENSG00000162607 USP1 736188 sc-eQTL 1.78e-01 -0.105 0.078 0.694 CD4_TCM L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 9.58e-01 -0.00483 0.0924 0.694 CD4_TCM L2
ENSG00000079739 PGM1 -420926 sc-eQTL 3.29e-01 0.0935 0.0955 0.694 CD4_TEM L2
ENSG00000088035 ALG6 -195090 sc-eQTL 5.31e-01 0.0603 0.0961 0.694 CD4_TEM L2
ENSG00000116641 DOCK7 484099 sc-eQTL 9.13e-01 -0.0102 0.0938 0.694 CD4_TEM L2
ENSG00000125703 ATG4C 388353 sc-eQTL 2.29e-01 0.109 0.0908 0.694 CD4_TEM L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 2.22e-02 -0.214 0.0928 0.694 CD4_TEM L2
ENSG00000162607 USP1 736188 sc-eQTL 6.54e-01 -0.0399 0.089 0.694 CD4_TEM L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 4.81e-01 0.0686 0.0973 0.694 CD4_TEM L2
ENSG00000079739 PGM1 -420926 sc-eQTL 7.20e-01 0.0318 0.0886 0.694 CD8_CTL L2
ENSG00000088035 ALG6 -195090 sc-eQTL 4.64e-01 -0.0691 0.0941 0.694 CD8_CTL L2
ENSG00000116641 DOCK7 484099 sc-eQTL 7.64e-01 0.0268 0.0894 0.694 CD8_CTL L2
ENSG00000125703 ATG4C 388353 sc-eQTL 9.68e-01 -0.00377 0.0952 0.694 CD8_CTL L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 7.45e-01 -0.0323 0.0989 0.694 CD8_CTL L2
ENSG00000162607 USP1 736188 sc-eQTL 4.17e-01 -0.0719 0.0885 0.694 CD8_CTL L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 8.45e-01 -0.0198 0.101 0.694 CD8_CTL L2
ENSG00000079739 PGM1 -420926 sc-eQTL 4.71e-01 -0.0639 0.0885 0.694 CD8_Naive L2
ENSG00000088035 ALG6 -195090 sc-eQTL 3.18e-02 0.196 0.0907 0.694 CD8_Naive L2
ENSG00000116641 DOCK7 484099 sc-eQTL 5.30e-01 0.0596 0.0947 0.694 CD8_Naive L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.86e-01 0.0635 0.0909 0.694 CD8_Naive L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 8.58e-02 -0.158 0.0915 0.694 CD8_Naive L2
ENSG00000162607 USP1 736188 sc-eQTL 2.99e-01 -0.0809 0.0777 0.694 CD8_Naive L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 4.72e-01 -0.0625 0.0868 0.694 CD8_Naive L2
ENSG00000079739 PGM1 -420926 sc-eQTL 7.21e-01 0.0344 0.0963 0.69 CD8_TCM L2
ENSG00000088035 ALG6 -195090 sc-eQTL 3.46e-01 0.092 0.0973 0.69 CD8_TCM L2
ENSG00000116641 DOCK7 484099 sc-eQTL 1.65e-01 0.132 0.0947 0.69 CD8_TCM L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.05e-01 0.0811 0.0972 0.69 CD8_TCM L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 6.22e-01 -0.0467 0.0945 0.69 CD8_TCM L2
ENSG00000162607 USP1 736188 sc-eQTL 2.49e-01 -0.105 0.0907 0.69 CD8_TCM L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 5.68e-01 -0.0552 0.0963 0.69 CD8_TCM L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.81e-01 -0.133 0.0992 0.696 CD8_TEM L2
ENSG00000088035 ALG6 -195090 sc-eQTL 6.32e-01 -0.048 0.1 0.696 CD8_TEM L2
ENSG00000116641 DOCK7 484099 sc-eQTL 9.08e-01 0.0113 0.097 0.696 CD8_TEM L2
ENSG00000125703 ATG4C 388353 sc-eQTL 6.88e-01 0.0375 0.0932 0.696 CD8_TEM L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 8.53e-01 -0.0188 0.101 0.696 CD8_TEM L2
ENSG00000162607 USP1 736188 sc-eQTL 4.68e-01 -0.0699 0.0962 0.696 CD8_TEM L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 8.13e-02 -0.17 0.0971 0.696 CD8_TEM L2
ENSG00000079739 PGM1 -420926 sc-eQTL 9.14e-01 -0.0101 0.094 0.695 MAIT L2
ENSG00000088035 ALG6 -195090 sc-eQTL 6.26e-01 -0.0454 0.093 0.695 MAIT L2
ENSG00000116641 DOCK7 484099 sc-eQTL 2.95e-01 0.0933 0.0889 0.695 MAIT L2
ENSG00000125703 ATG4C 388353 sc-eQTL 1.75e-02 0.222 0.0928 0.695 MAIT L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.79e-01 -0.0667 0.0941 0.695 MAIT L2
ENSG00000162607 USP1 736188 sc-eQTL 3.08e-01 -0.0953 0.0932 0.695 MAIT L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 8.17e-01 0.0224 0.097 0.695 MAIT L2
ENSG00000079739 PGM1 -420926 sc-eQTL 6.96e-01 0.0368 0.094 0.7 NK_CD56bright L2
ENSG00000088035 ALG6 -195090 sc-eQTL 5.35e-01 -0.0598 0.0963 0.7 NK_CD56bright L2
ENSG00000116641 DOCK7 484099 sc-eQTL 6.92e-01 -0.0332 0.0835 0.7 NK_CD56bright L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.57e-01 0.0695 0.0932 0.7 NK_CD56bright L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 7.68e-01 0.0287 0.0972 0.7 NK_CD56bright L2
ENSG00000162607 USP1 736188 sc-eQTL 2.57e-01 0.114 0.0999 0.7 NK_CD56bright L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 9.71e-01 -0.00353 0.0959 0.7 NK_CD56bright L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.88e-01 0.0994 0.0753 0.698 NK_CD56dim L2
ENSG00000088035 ALG6 -195090 sc-eQTL 3.24e-01 -0.0946 0.0957 0.698 NK_CD56dim L2
ENSG00000116641 DOCK7 484099 sc-eQTL 2.61e-01 -0.0938 0.0832 0.698 NK_CD56dim L2
ENSG00000125703 ATG4C 388353 sc-eQTL 3.02e-01 0.0876 0.0846 0.698 NK_CD56dim L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.87e-01 0.0671 0.0963 0.698 NK_CD56dim L2
ENSG00000162607 USP1 736188 sc-eQTL 9.64e-01 -0.00424 0.0936 0.698 NK_CD56dim L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 7.44e-01 0.034 0.104 0.698 NK_CD56dim L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.44e-01 -0.15 0.102 0.703 NK_HLA L2
ENSG00000088035 ALG6 -195090 sc-eQTL 1.99e-01 0.137 0.106 0.703 NK_HLA L2
ENSG00000116641 DOCK7 484099 sc-eQTL 9.44e-01 0.00572 0.0814 0.703 NK_HLA L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.81e-01 0.0668 0.0945 0.703 NK_HLA L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 9.27e-01 -0.00907 0.0994 0.703 NK_HLA L2
ENSG00000162607 USP1 736188 sc-eQTL 8.83e-02 0.177 0.103 0.703 NK_HLA L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 8.90e-01 0.0131 0.0946 0.703 NK_HLA L2
ENSG00000079739 PGM1 -420926 sc-eQTL 5.47e-01 0.0494 0.0819 0.698 NK_cytokine L2
ENSG00000088035 ALG6 -195090 sc-eQTL 9.46e-01 0.00624 0.0926 0.698 NK_cytokine L2
ENSG00000116641 DOCK7 484099 sc-eQTL 5.23e-01 0.0549 0.0857 0.698 NK_cytokine L2
ENSG00000125703 ATG4C 388353 sc-eQTL 1.47e-01 0.127 0.0873 0.698 NK_cytokine L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.88e-01 -0.063 0.0908 0.698 NK_cytokine L2
ENSG00000162607 USP1 736188 sc-eQTL 8.92e-01 -0.0129 0.0955 0.698 NK_cytokine L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 8.67e-01 -0.0162 0.0968 0.698 NK_cytokine L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.54e-01 -0.162 0.113 0.674 PB L2
ENSG00000088035 ALG6 -195090 sc-eQTL 6.82e-01 0.0491 0.12 0.674 PB L2
ENSG00000116641 DOCK7 484099 sc-eQTL 5.08e-01 -0.0848 0.128 0.674 PB L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.35e-02 0.224 0.11 0.674 PB L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 3.72e-01 0.0995 0.111 0.674 PB L2
ENSG00000162607 USP1 736188 sc-eQTL 4.73e-01 0.0798 0.111 0.674 PB L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 6.24e-01 -0.0602 0.122 0.674 PB L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.45e-01 -0.128 0.0872 0.691 Pro_T L2
ENSG00000088035 ALG6 -195090 sc-eQTL 4.46e-01 -0.0679 0.089 0.691 Pro_T L2
ENSG00000116641 DOCK7 484099 sc-eQTL 2.76e-01 -0.0974 0.0892 0.691 Pro_T L2
ENSG00000125703 ATG4C 388353 sc-eQTL 7.29e-01 0.0272 0.0783 0.691 Pro_T L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 2.53e-01 0.0897 0.0783 0.691 Pro_T L2
ENSG00000162607 USP1 736188 sc-eQTL 5.18e-01 0.035 0.054 0.691 Pro_T L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 8.89e-01 -0.0128 0.0913 0.691 Pro_T L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.96e-01 -0.12 0.0922 0.694 Treg L2
ENSG00000088035 ALG6 -195090 sc-eQTL 6.88e-01 -0.0398 0.0989 0.694 Treg L2
ENSG00000116641 DOCK7 484099 sc-eQTL 4.40e-01 -0.0702 0.0907 0.694 Treg L2
ENSG00000125703 ATG4C 388353 sc-eQTL 7.47e-01 -0.03 0.0928 0.694 Treg L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 3.39e-01 -0.0928 0.0969 0.694 Treg L2
ENSG00000162607 USP1 736188 sc-eQTL 2.87e-01 -0.1 0.0937 0.694 Treg L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 3.34e-01 -0.0898 0.0927 0.694 Treg L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.57e-01 0.133 0.0932 0.702 cDC L2
ENSG00000088035 ALG6 -195090 sc-eQTL 2.73e-01 0.104 0.0947 0.702 cDC L2
ENSG00000116641 DOCK7 484099 sc-eQTL 6.35e-01 -0.0443 0.0932 0.702 cDC L2
ENSG00000125703 ATG4C 388353 sc-eQTL 8.13e-01 -0.0192 0.081 0.702 cDC L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 8.24e-01 -0.0229 0.103 0.702 cDC L2
ENSG00000162607 USP1 736188 sc-eQTL 1.92e-01 -0.119 0.091 0.702 cDC L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 9.06e-01 -0.00977 0.0825 0.702 cDC L2
ENSG00000079739 PGM1 -420926 sc-eQTL 3.55e-01 -0.0801 0.0865 0.694 cMono_IL1B L2
ENSG00000088035 ALG6 -195090 sc-eQTL 6.99e-01 -0.0336 0.0867 0.694 cMono_IL1B L2
ENSG00000116641 DOCK7 484099 sc-eQTL 5.96e-01 0.0486 0.0914 0.694 cMono_IL1B L2
ENSG00000125703 ATG4C 388353 sc-eQTL 6.94e-01 0.0253 0.0643 0.694 cMono_IL1B L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 6.82e-01 0.0373 0.091 0.694 cMono_IL1B L2
ENSG00000162607 USP1 736188 sc-eQTL 7.86e-02 -0.141 0.0798 0.694 cMono_IL1B L2
ENSG00000240563 L1TD1 977636 sc-eQTL 5.24e-01 0.0514 0.0806 0.694 cMono_IL1B L2
ENSG00000079739 PGM1 -420926 sc-eQTL 9.87e-01 -0.00154 0.0961 0.694 cMono_S100A L2
ENSG00000088035 ALG6 -195090 sc-eQTL 8.13e-02 0.169 0.0967 0.694 cMono_S100A L2
ENSG00000116641 DOCK7 484099 sc-eQTL 3.25e-01 -0.0888 0.0901 0.694 cMono_S100A L2
ENSG00000125703 ATG4C 388353 sc-eQTL 3.76e-01 -0.0693 0.078 0.694 cMono_S100A L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 3.38e-01 -0.0845 0.088 0.694 cMono_S100A L2
ENSG00000162607 USP1 736188 sc-eQTL 7.72e-01 -0.0263 0.0908 0.694 cMono_S100A L2
ENSG00000240563 L1TD1 977636 sc-eQTL 2.90e-01 0.0799 0.0753 0.694 cMono_S100A L2
ENSG00000079739 PGM1 -420926 sc-eQTL 5.31e-01 -0.0687 0.109 0.718 gdT L2
ENSG00000088035 ALG6 -195090 sc-eQTL 3.22e-02 0.249 0.115 0.718 gdT L2
ENSG00000116641 DOCK7 484099 sc-eQTL 5.49e-01 0.0688 0.114 0.718 gdT L2
ENSG00000125703 ATG4C 388353 sc-eQTL 8.44e-01 -0.0215 0.109 0.718 gdT L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 9.88e-01 0.0018 0.116 0.718 gdT L2
ENSG00000162607 USP1 736188 sc-eQTL 1.44e-01 -0.16 0.109 0.718 gdT L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 1.09e-03 -0.367 0.11 0.718 gdT L2
ENSG00000079739 PGM1 -420926 sc-eQTL 1.83e-01 -0.131 0.098 0.7 intMono L2
ENSG00000088035 ALG6 -195090 sc-eQTL 7.26e-01 -0.0321 0.0916 0.7 intMono L2
ENSG00000116641 DOCK7 484099 sc-eQTL 6.68e-01 0.0402 0.0936 0.7 intMono L2
ENSG00000125703 ATG4C 388353 sc-eQTL 2.86e-01 -0.0954 0.0891 0.7 intMono L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 4.83e-01 -0.0692 0.0983 0.7 intMono L2
ENSG00000162607 USP1 736188 sc-eQTL 4.20e-02 -0.203 0.0991 0.7 intMono L2
ENSG00000240563 L1TD1 977636 sc-eQTL 9.08e-01 -0.00853 0.0736 0.7 intMono L2
ENSG00000079739 PGM1 -420926 sc-eQTL 3.41e-01 0.0831 0.087 0.692 ncMono L2
ENSG00000088035 ALG6 -195090 sc-eQTL 6.87e-01 -0.0386 0.0957 0.692 ncMono L2
ENSG00000116641 DOCK7 484099 sc-eQTL 5.08e-01 -0.0624 0.0942 0.692 ncMono L2
ENSG00000125703 ATG4C 388353 sc-eQTL 3.22e-01 -0.0872 0.0878 0.692 ncMono L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 9.63e-01 -0.00424 0.0921 0.692 ncMono L2
ENSG00000162607 USP1 736188 sc-eQTL 5.39e-01 0.0578 0.094 0.692 ncMono L2
ENSG00000240563 L1TD1 977636 sc-eQTL 6.02e-01 -0.0349 0.0667 0.692 ncMono L2
ENSG00000079739 PGM1 -420926 sc-eQTL 6.26e-01 0.0534 0.109 0.692 pDC L2
ENSG00000088035 ALG6 -195090 sc-eQTL 8.56e-01 0.0193 0.107 0.692 pDC L2
ENSG00000116641 DOCK7 484099 sc-eQTL 4.87e-01 0.0757 0.109 0.692 pDC L2
ENSG00000125703 ATG4C 388353 sc-eQTL 4.01e-01 0.0822 0.0975 0.692 pDC L2
ENSG00000142856 ITGB3BP -421236 sc-eQTL 5.10e-01 -0.0723 0.11 0.692 pDC L2
ENSG00000162607 USP1 736188 sc-eQTL 1.58e-01 -0.158 0.111 0.692 pDC L2
ENSG00000203965 EFCAB7 -350887 sc-eQTL 6.04e-01 0.0504 0.097 0.692 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -420926 sc-eQTL 3.35e-01 -0.0884 0.0915 0.694 B_Memory LOneK1K
ENSG00000088035 ALG6 -195090 sc-eQTL 2.30e-01 -0.122 0.101 0.694 B_Memory LOneK1K
ENSG00000116641 DOCK7 484099 sc-eQTL 7.66e-01 -0.0263 0.088 0.694 B_Memory LOneK1K
ENSG00000125703 ATG4C 388353 sc-eQTL 1.82e-01 -0.0949 0.0709 0.694 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -421236 sc-eQTL 1.41e-01 -0.137 0.093 0.694 B_Memory LOneK1K
ENSG00000162607 USP1 736188 sc-eQTL 7.25e-01 -0.032 0.0908 0.694 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -350887 sc-eQTL 5.35e-01 -0.0604 0.0973 0.694 B_Memory LOneK1K
ENSG00000079739 PGM1 -420926 sc-eQTL 3.01e-01 0.0989 0.0954 0.694 B_Naive LOneK1K
ENSG00000088035 ALG6 -195090 sc-eQTL 4.44e-01 0.0755 0.0984 0.694 B_Naive LOneK1K
ENSG00000116641 DOCK7 484099 sc-eQTL 7.34e-01 0.0313 0.0919 0.694 B_Naive LOneK1K
ENSG00000125703 ATG4C 388353 sc-eQTL 7.50e-02 0.125 0.0697 0.694 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -421236 sc-eQTL 2.95e-01 -0.104 0.099 0.694 B_Naive LOneK1K
ENSG00000162607 USP1 736188 sc-eQTL 3.79e-01 -0.075 0.0851 0.694 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -350887 sc-eQTL 1.23e-01 -0.153 0.0992 0.694 B_Naive LOneK1K
ENSG00000079739 PGM1 -420926 sc-eQTL 7.41e-01 -0.0294 0.0887 0.694 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -195090 sc-eQTL 4.53e-01 0.0645 0.0858 0.694 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 484099 sc-eQTL 9.90e-01 0.00104 0.0865 0.694 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 388353 sc-eQTL 8.34e-01 -0.0125 0.0598 0.694 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -421236 sc-eQTL 9.36e-01 -0.00707 0.0885 0.694 CD14_Mono LOneK1K
ENSG00000162607 USP1 736188 sc-eQTL 1.92e-01 -0.0985 0.0753 0.694 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 977636 sc-eQTL 3.50e-01 0.0766 0.0818 0.694 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -420926 sc-eQTL 3.24e-01 -0.0834 0.0843 0.694 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -195090 sc-eQTL 9.52e-01 -0.00578 0.0959 0.694 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 484099 sc-eQTL 6.42e-01 -0.0442 0.0948 0.694 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 388353 sc-eQTL 2.46e-01 -0.0938 0.0806 0.694 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -421236 sc-eQTL 9.50e-01 -0.00588 0.0939 0.694 CD16_Mono LOneK1K
ENSG00000162607 USP1 736188 sc-eQTL 6.29e-01 -0.0427 0.0882 0.694 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 977636 sc-eQTL 9.57e-01 0.00327 0.0602 0.694 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -420926 sc-eQTL 7.18e-01 0.0267 0.0738 0.698 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -195090 sc-eQTL 9.76e-01 -0.00265 0.0886 0.698 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 484099 sc-eQTL 6.12e-01 -0.0403 0.0794 0.698 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 388353 sc-eQTL 3.51e-01 0.0739 0.0791 0.698 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -421236 sc-eQTL 7.98e-01 0.024 0.0939 0.698 NK_CD56dim LOneK1K
ENSG00000162607 USP1 736188 sc-eQTL 7.28e-01 -0.0297 0.0853 0.698 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -350887 sc-eQTL 9.87e-01 0.00163 0.104 0.698 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -420926 eQTL 0.0563 0.0374 0.0196 0.00461 0.0 0.278
ENSG00000116652 DLEU2L -374597 eQTL 0.0264 0.0631 0.0284 0.00151 0.0 0.278

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116652 DLEU2L -374597 1.26e-06 8.9e-07 3.08e-07 3.16e-07 2.19e-07 3.69e-07 8.36e-07 3.28e-07 1.12e-06 3.85e-07 1.15e-06 5.6e-07 1.43e-06 2.29e-07 4.49e-07 6.35e-07 7.7e-07 5.67e-07 4.54e-07 4.68e-07 3.5e-07 9.64e-07 6.33e-07 5.01e-07 1.57e-06 3.28e-07 6.37e-07 4.92e-07 8.4e-07 9.21e-07 4.55e-07 7.32e-08 1.49e-07 4.51e-07 3.42e-07 3.94e-07 3.62e-07 1.45e-07 1.46e-07 3.03e-08 2.19e-07 9.58e-07 7.6e-08 5.89e-09 1.69e-07 7.09e-08 2.09e-07 8.37e-08 9.5e-08
ENSG00000230798 \N -151956 4.19e-06 3.77e-06 9.15e-07 2.02e-06 1.33e-06 1.03e-06 2.52e-06 9.97e-07 3.73e-06 2.02e-06 3.95e-06 3.04e-06 6.2e-06 1.35e-06 1.4e-06 2.68e-06 1.99e-06 2.78e-06 1.35e-06 1e-06 2.62e-06 4.13e-06 3.51e-06 1.38e-06 4.66e-06 1.65e-06 2.41e-06 1.44e-06 4.15e-06 3.3e-06 2.03e-06 5.06e-07 7.32e-07 1.52e-06 1.96e-06 9.03e-07 9.28e-07 5.11e-07 1.06e-06 3.57e-07 6.35e-07 4.17e-06 3.96e-07 1.85e-07 5.95e-07 3.93e-07 1.03e-06 5.06e-07 4.07e-07