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Genes within 1Mb (chr1:63170735:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -422676 sc-eQTL 9.82e-01 0.00186 0.0815 0.703 B L1
ENSG00000088035 ALG6 -196840 sc-eQTL 9.69e-01 -0.00331 0.0845 0.703 B L1
ENSG00000116641 DOCK7 482349 sc-eQTL 3.81e-01 0.0741 0.0843 0.703 B L1
ENSG00000125703 ATG4C 386603 sc-eQTL 1.35e-01 0.0876 0.0584 0.703 B L1
ENSG00000142856 ITGB3BP -422986 sc-eQTL 2.86e-01 -0.0996 0.0932 0.703 B L1
ENSG00000162607 USP1 734438 sc-eQTL 1.34e-01 -0.121 0.0807 0.703 B L1
ENSG00000203965 EFCAB7 -352637 sc-eQTL 1.91e-01 -0.125 0.0953 0.703 B L1
ENSG00000079739 PGM1 -422676 sc-eQTL 8.50e-01 0.013 0.0687 0.703 CD4T L1
ENSG00000088035 ALG6 -196840 sc-eQTL 8.69e-01 -0.0125 0.0758 0.703 CD4T L1
ENSG00000116641 DOCK7 482349 sc-eQTL 7.01e-01 0.0295 0.0767 0.703 CD4T L1
ENSG00000125703 ATG4C 386603 sc-eQTL 3.09e-01 0.063 0.0618 0.703 CD4T L1
ENSG00000142856 ITGB3BP -422986 sc-eQTL 4.95e-02 -0.172 0.0871 0.703 CD4T L1
ENSG00000162607 USP1 734438 sc-eQTL 8.70e-01 0.00988 0.0601 0.703 CD4T L1
ENSG00000203965 EFCAB7 -352637 sc-eQTL 6.70e-01 0.0336 0.0789 0.703 CD4T L1
ENSG00000079739 PGM1 -422676 sc-eQTL 8.56e-01 0.0138 0.0762 0.703 CD8T L1
ENSG00000088035 ALG6 -196840 sc-eQTL 7.20e-01 -0.0301 0.084 0.703 CD8T L1
ENSG00000116641 DOCK7 482349 sc-eQTL 3.69e-01 0.0764 0.0849 0.703 CD8T L1
ENSG00000125703 ATG4C 386603 sc-eQTL 6.36e-02 0.15 0.0802 0.703 CD8T L1
ENSG00000142856 ITGB3BP -422986 sc-eQTL 7.50e-01 -0.0288 0.0904 0.703 CD8T L1
ENSG00000162607 USP1 734438 sc-eQTL 7.31e-02 -0.126 0.0699 0.703 CD8T L1
ENSG00000203965 EFCAB7 -352637 sc-eQTL 1.44e-01 -0.132 0.0897 0.703 CD8T L1
ENSG00000079739 PGM1 -422676 sc-eQTL 1.52e-01 0.121 0.0844 0.703 DC L1
ENSG00000088035 ALG6 -196840 sc-eQTL 2.06e-01 0.111 0.0872 0.703 DC L1
ENSG00000116641 DOCK7 482349 sc-eQTL 9.51e-01 -0.00547 0.0897 0.703 DC L1
ENSG00000125703 ATG4C 386603 sc-eQTL 9.47e-01 0.00469 0.0702 0.703 DC L1
ENSG00000142856 ITGB3BP -422986 sc-eQTL 1.06e-01 -0.158 0.0975 0.703 DC L1
ENSG00000162607 USP1 734438 sc-eQTL 1.47e-02 -0.208 0.0844 0.703 DC L1
ENSG00000203965 EFCAB7 -352637 sc-eQTL 4.26e-01 0.068 0.0853 0.703 DC L1
ENSG00000079739 PGM1 -422676 sc-eQTL 5.96e-01 -0.0437 0.0824 0.703 Mono L1
ENSG00000088035 ALG6 -196840 sc-eQTL 1.49e-01 0.124 0.0856 0.703 Mono L1
ENSG00000116641 DOCK7 482349 sc-eQTL 3.28e-01 -0.0814 0.0831 0.703 Mono L1
ENSG00000125703 ATG4C 386603 sc-eQTL 4.75e-01 -0.0402 0.0562 0.703 Mono L1
ENSG00000142856 ITGB3BP -422986 sc-eQTL 9.68e-01 0.00354 0.0889 0.703 Mono L1
ENSG00000162607 USP1 734438 sc-eQTL 8.05e-01 -0.0181 0.073 0.703 Mono L1
ENSG00000240563 L1TD1 975886 sc-eQTL 4.79e-01 0.0482 0.0681 0.703 Mono L1
ENSG00000079739 PGM1 -422676 sc-eQTL 7.46e-01 0.0232 0.0716 0.704 NK L1
ENSG00000088035 ALG6 -196840 sc-eQTL 8.65e-01 0.0143 0.084 0.704 NK L1
ENSG00000116641 DOCK7 482349 sc-eQTL 2.85e-01 -0.074 0.069 0.704 NK L1
ENSG00000125703 ATG4C 386603 sc-eQTL 5.45e-01 0.0449 0.0742 0.704 NK L1
ENSG00000142856 ITGB3BP -422986 sc-eQTL 3.74e-01 0.082 0.0921 0.704 NK L1
ENSG00000162607 USP1 734438 sc-eQTL 8.81e-01 -0.0124 0.0825 0.704 NK L1
ENSG00000203965 EFCAB7 -352637 sc-eQTL 5.23e-01 -0.0641 0.1 0.704 NK L1
ENSG00000079739 PGM1 -422676 sc-eQTL 9.59e-01 0.00415 0.0807 0.703 Other_T L1
ENSG00000088035 ALG6 -196840 sc-eQTL 7.30e-01 -0.028 0.081 0.703 Other_T L1
ENSG00000116641 DOCK7 482349 sc-eQTL 4.91e-01 0.057 0.0827 0.703 Other_T L1
ENSG00000125703 ATG4C 386603 sc-eQTL 6.64e-02 0.131 0.0711 0.703 Other_T L1
ENSG00000142856 ITGB3BP -422986 sc-eQTL 3.00e-01 0.0659 0.0634 0.703 Other_T L1
ENSG00000162607 USP1 734438 sc-eQTL 2.54e-01 -0.0628 0.0549 0.703 Other_T L1
ENSG00000203965 EFCAB7 -352637 sc-eQTL 5.18e-02 -0.19 0.0971 0.703 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -422676 sc-eQTL 6.89e-01 0.0422 0.105 0.691 B_Activated L2
ENSG00000088035 ALG6 -196840 sc-eQTL 4.63e-01 -0.0741 0.101 0.691 B_Activated L2
ENSG00000116641 DOCK7 482349 sc-eQTL 5.07e-01 -0.0623 0.0937 0.691 B_Activated L2
ENSG00000125703 ATG4C 386603 sc-eQTL 4.80e-01 -0.0697 0.0985 0.691 B_Activated L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 3.62e-01 -0.0879 0.0961 0.691 B_Activated L2
ENSG00000162607 USP1 734438 sc-eQTL 4.73e-01 0.075 0.104 0.691 B_Activated L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 2.49e-01 -0.105 0.0909 0.691 B_Activated L2
ENSG00000079739 PGM1 -422676 sc-eQTL 3.62e-01 -0.0889 0.0973 0.704 B_Intermediate L2
ENSG00000088035 ALG6 -196840 sc-eQTL 1.48e-01 -0.143 0.0986 0.704 B_Intermediate L2
ENSG00000116641 DOCK7 482349 sc-eQTL 9.37e-01 0.00753 0.0946 0.704 B_Intermediate L2
ENSG00000125703 ATG4C 386603 sc-eQTL 8.59e-01 0.0143 0.0801 0.704 B_Intermediate L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 5.26e-01 -0.0605 0.0953 0.704 B_Intermediate L2
ENSG00000162607 USP1 734438 sc-eQTL 5.89e-01 -0.0515 0.0952 0.704 B_Intermediate L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 3.28e-01 -0.0925 0.0943 0.704 B_Intermediate L2
ENSG00000079739 PGM1 -422676 sc-eQTL 7.57e-01 -0.03 0.097 0.709 B_Memory L2
ENSG00000088035 ALG6 -196840 sc-eQTL 5.65e-01 -0.0568 0.0985 0.709 B_Memory L2
ENSG00000116641 DOCK7 482349 sc-eQTL 1.90e-01 0.121 0.0921 0.709 B_Memory L2
ENSG00000125703 ATG4C 386603 sc-eQTL 6.45e-01 -0.0406 0.0879 0.709 B_Memory L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 4.08e-01 -0.0833 0.1 0.709 B_Memory L2
ENSG00000162607 USP1 734438 sc-eQTL 1.43e-01 -0.149 0.101 0.709 B_Memory L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 2.99e-01 0.104 0.0996 0.709 B_Memory L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.97e-01 0.125 0.0964 0.703 B_Naive1 L2
ENSG00000088035 ALG6 -196840 sc-eQTL 7.88e-01 0.0262 0.0971 0.703 B_Naive1 L2
ENSG00000116641 DOCK7 482349 sc-eQTL 6.59e-01 0.0411 0.093 0.703 B_Naive1 L2
ENSG00000125703 ATG4C 386603 sc-eQTL 1.12e-02 0.181 0.0706 0.703 B_Naive1 L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 3.04e-01 -0.0978 0.0949 0.703 B_Naive1 L2
ENSG00000162607 USP1 734438 sc-eQTL 9.08e-01 0.00971 0.0836 0.703 B_Naive1 L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 2.35e-02 -0.229 0.1 0.703 B_Naive1 L2
ENSG00000079739 PGM1 -422676 sc-eQTL 5.02e-01 0.064 0.0953 0.706 B_Naive2 L2
ENSG00000088035 ALG6 -196840 sc-eQTL 3.70e-01 0.0892 0.0993 0.706 B_Naive2 L2
ENSG00000116641 DOCK7 482349 sc-eQTL 9.77e-01 -0.00274 0.0956 0.706 B_Naive2 L2
ENSG00000125703 ATG4C 386603 sc-eQTL 4.64e-01 0.0674 0.0919 0.706 B_Naive2 L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 4.57e-01 -0.0743 0.0997 0.706 B_Naive2 L2
ENSG00000162607 USP1 734438 sc-eQTL 3.53e-02 -0.199 0.094 0.706 B_Naive2 L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 9.18e-01 0.0102 0.0993 0.706 B_Naive2 L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.20e-01 0.15 0.0958 0.705 CD4_CTL L2
ENSG00000088035 ALG6 -196840 sc-eQTL 2.86e-01 -0.109 0.102 0.705 CD4_CTL L2
ENSG00000116641 DOCK7 482349 sc-eQTL 7.69e-01 -0.0262 0.0891 0.705 CD4_CTL L2
ENSG00000125703 ATG4C 386603 sc-eQTL 1.54e-01 -0.131 0.0917 0.705 CD4_CTL L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 3.90e-02 -0.203 0.0975 0.705 CD4_CTL L2
ENSG00000162607 USP1 734438 sc-eQTL 5.39e-01 0.0577 0.0937 0.705 CD4_CTL L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 3.94e-01 0.0798 0.0935 0.705 CD4_CTL L2
ENSG00000079739 PGM1 -422676 sc-eQTL 4.53e-01 0.0579 0.0771 0.703 CD4_Naive L2
ENSG00000088035 ALG6 -196840 sc-eQTL 5.91e-01 0.0451 0.0838 0.703 CD4_Naive L2
ENSG00000116641 DOCK7 482349 sc-eQTL 1.75e-01 0.112 0.082 0.703 CD4_Naive L2
ENSG00000125703 ATG4C 386603 sc-eQTL 4.76e-01 0.0519 0.0727 0.703 CD4_Naive L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 1.37e-01 -0.132 0.0885 0.703 CD4_Naive L2
ENSG00000162607 USP1 734438 sc-eQTL 5.19e-01 0.0439 0.0679 0.703 CD4_Naive L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 6.15e-01 0.0445 0.0883 0.703 CD4_Naive L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.76e-01 -0.108 0.0797 0.703 CD4_TCM L2
ENSG00000088035 ALG6 -196840 sc-eQTL 7.40e-01 -0.0309 0.0929 0.703 CD4_TCM L2
ENSG00000116641 DOCK7 482349 sc-eQTL 1.46e-01 -0.12 0.0819 0.703 CD4_TCM L2
ENSG00000125703 ATG4C 386603 sc-eQTL 3.40e-02 0.169 0.0793 0.703 CD4_TCM L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 1.70e-01 -0.129 0.0941 0.703 CD4_TCM L2
ENSG00000162607 USP1 734438 sc-eQTL 1.89e-01 -0.102 0.0772 0.703 CD4_TCM L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 7.77e-01 -0.0259 0.0914 0.703 CD4_TCM L2
ENSG00000079739 PGM1 -422676 sc-eQTL 6.31e-01 0.0454 0.0946 0.703 CD4_TEM L2
ENSG00000088035 ALG6 -196840 sc-eQTL 6.34e-01 0.0453 0.0951 0.703 CD4_TEM L2
ENSG00000116641 DOCK7 482349 sc-eQTL 8.51e-01 -0.0174 0.0927 0.703 CD4_TEM L2
ENSG00000125703 ATG4C 386603 sc-eQTL 2.64e-01 0.101 0.0898 0.703 CD4_TEM L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 4.09e-02 -0.189 0.0921 0.703 CD4_TEM L2
ENSG00000162607 USP1 734438 sc-eQTL 6.02e-01 -0.046 0.088 0.703 CD4_TEM L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 3.30e-01 0.0939 0.0961 0.703 CD4_TEM L2
ENSG00000079739 PGM1 -422676 sc-eQTL 5.78e-01 0.0491 0.0881 0.703 CD8_CTL L2
ENSG00000088035 ALG6 -196840 sc-eQTL 3.98e-01 -0.0793 0.0936 0.703 CD8_CTL L2
ENSG00000116641 DOCK7 482349 sc-eQTL 6.17e-01 0.0445 0.0889 0.703 CD8_CTL L2
ENSG00000125703 ATG4C 386603 sc-eQTL 8.83e-01 -0.0139 0.0947 0.703 CD8_CTL L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 9.07e-01 -0.0115 0.0985 0.703 CD8_CTL L2
ENSG00000162607 USP1 734438 sc-eQTL 3.86e-01 -0.0765 0.088 0.703 CD8_CTL L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 5.76e-01 -0.0565 0.101 0.703 CD8_CTL L2
ENSG00000079739 PGM1 -422676 sc-eQTL 7.18e-01 -0.0318 0.088 0.703 CD8_Naive L2
ENSG00000088035 ALG6 -196840 sc-eQTL 5.78e-02 0.172 0.0904 0.703 CD8_Naive L2
ENSG00000116641 DOCK7 482349 sc-eQTL 4.66e-01 0.0688 0.0941 0.703 CD8_Naive L2
ENSG00000125703 ATG4C 386603 sc-eQTL 3.48e-01 0.0848 0.0903 0.703 CD8_Naive L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 1.36e-01 -0.136 0.0911 0.703 CD8_Naive L2
ENSG00000162607 USP1 734438 sc-eQTL 1.94e-01 -0.101 0.0771 0.703 CD8_Naive L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 6.18e-01 -0.0432 0.0863 0.703 CD8_Naive L2
ENSG00000079739 PGM1 -422676 sc-eQTL 6.55e-01 0.0428 0.0956 0.699 CD8_TCM L2
ENSG00000088035 ALG6 -196840 sc-eQTL 3.32e-01 0.0939 0.0966 0.699 CD8_TCM L2
ENSG00000116641 DOCK7 482349 sc-eQTL 1.04e-01 0.153 0.0939 0.699 CD8_TCM L2
ENSG00000125703 ATG4C 386603 sc-eQTL 4.36e-01 0.0753 0.0965 0.699 CD8_TCM L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 9.60e-01 -0.00474 0.0939 0.699 CD8_TCM L2
ENSG00000162607 USP1 734438 sc-eQTL 3.55e-01 -0.0837 0.0902 0.699 CD8_TCM L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 3.18e-01 -0.0956 0.0955 0.699 CD8_TCM L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.55e-01 -0.141 0.0991 0.703 CD8_TEM L2
ENSG00000088035 ALG6 -196840 sc-eQTL 7.84e-01 -0.0274 0.1 0.703 CD8_TEM L2
ENSG00000116641 DOCK7 482349 sc-eQTL 8.02e-01 0.0243 0.0969 0.703 CD8_TEM L2
ENSG00000125703 ATG4C 386603 sc-eQTL 6.38e-01 0.0439 0.0931 0.703 CD8_TEM L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 8.91e-01 -0.0139 0.101 0.703 CD8_TEM L2
ENSG00000162607 USP1 734438 sc-eQTL 3.43e-01 -0.0914 0.096 0.703 CD8_TEM L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 8.28e-02 -0.169 0.0971 0.703 CD8_TEM L2
ENSG00000079739 PGM1 -422676 sc-eQTL 7.74e-01 -0.0269 0.0934 0.703 MAIT L2
ENSG00000088035 ALG6 -196840 sc-eQTL 8.63e-01 -0.0159 0.0925 0.703 MAIT L2
ENSG00000116641 DOCK7 482349 sc-eQTL 2.59e-01 0.0999 0.0884 0.703 MAIT L2
ENSG00000125703 ATG4C 386603 sc-eQTL 2.36e-02 0.211 0.0923 0.703 MAIT L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 4.20e-01 -0.0755 0.0935 0.703 MAIT L2
ENSG00000162607 USP1 734438 sc-eQTL 1.08e-01 -0.149 0.0923 0.703 MAIT L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 9.63e-01 -0.00442 0.0964 0.703 MAIT L2
ENSG00000079739 PGM1 -422676 sc-eQTL 5.23e-01 0.0598 0.0935 0.709 NK_CD56bright L2
ENSG00000088035 ALG6 -196840 sc-eQTL 2.45e-01 -0.112 0.0957 0.709 NK_CD56bright L2
ENSG00000116641 DOCK7 482349 sc-eQTL 7.06e-01 -0.0314 0.0831 0.709 NK_CD56bright L2
ENSG00000125703 ATG4C 386603 sc-eQTL 5.42e-01 0.0566 0.0928 0.709 NK_CD56bright L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 9.01e-01 0.012 0.0967 0.709 NK_CD56bright L2
ENSG00000162607 USP1 734438 sc-eQTL 1.99e-01 0.128 0.0994 0.709 NK_CD56bright L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 9.37e-01 -0.00759 0.0954 0.709 NK_CD56bright L2
ENSG00000079739 PGM1 -422676 sc-eQTL 2.06e-01 0.0946 0.0746 0.707 NK_CD56dim L2
ENSG00000088035 ALG6 -196840 sc-eQTL 4.20e-01 -0.0766 0.0948 0.707 NK_CD56dim L2
ENSG00000116641 DOCK7 482349 sc-eQTL 3.35e-01 -0.0797 0.0825 0.707 NK_CD56dim L2
ENSG00000125703 ATG4C 386603 sc-eQTL 2.89e-01 0.0889 0.0837 0.707 NK_CD56dim L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 5.89e-01 0.0517 0.0955 0.707 NK_CD56dim L2
ENSG00000162607 USP1 734438 sc-eQTL 9.93e-01 0.00078 0.0927 0.707 NK_CD56dim L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 8.50e-01 -0.0195 0.103 0.707 NK_CD56dim L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.03e-01 -0.166 0.102 0.71 NK_HLA L2
ENSG00000088035 ALG6 -196840 sc-eQTL 2.91e-01 0.112 0.106 0.71 NK_HLA L2
ENSG00000116641 DOCK7 482349 sc-eQTL 8.96e-01 -0.0106 0.0812 0.71 NK_HLA L2
ENSG00000125703 ATG4C 386603 sc-eQTL 5.29e-01 0.0594 0.0943 0.71 NK_HLA L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 8.45e-01 -0.0193 0.0991 0.71 NK_HLA L2
ENSG00000162607 USP1 734438 sc-eQTL 1.69e-01 0.142 0.103 0.71 NK_HLA L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 8.59e-01 -0.0168 0.0944 0.71 NK_HLA L2
ENSG00000079739 PGM1 -422676 sc-eQTL 6.43e-01 0.0376 0.0811 0.707 NK_cytokine L2
ENSG00000088035 ALG6 -196840 sc-eQTL 7.09e-01 0.0342 0.0916 0.707 NK_cytokine L2
ENSG00000116641 DOCK7 482349 sc-eQTL 6.60e-01 0.0374 0.0849 0.707 NK_cytokine L2
ENSG00000125703 ATG4C 386603 sc-eQTL 1.94e-01 0.113 0.0865 0.707 NK_cytokine L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 8.16e-01 -0.0209 0.09 0.707 NK_cytokine L2
ENSG00000162607 USP1 734438 sc-eQTL 6.12e-01 -0.048 0.0945 0.707 NK_cytokine L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 6.68e-01 -0.0412 0.0958 0.707 NK_cytokine L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.10e-01 -0.18 0.112 0.685 PB L2
ENSG00000088035 ALG6 -196840 sc-eQTL 6.98e-01 0.0462 0.119 0.685 PB L2
ENSG00000116641 DOCK7 482349 sc-eQTL 3.45e-01 -0.12 0.126 0.685 PB L2
ENSG00000125703 ATG4C 386603 sc-eQTL 2.87e-02 0.24 0.108 0.685 PB L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 1.92e-01 0.144 0.11 0.685 PB L2
ENSG00000162607 USP1 734438 sc-eQTL 5.05e-01 0.0733 0.11 0.685 PB L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 6.97e-01 -0.0473 0.121 0.685 PB L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.18e-01 -0.135 0.0861 0.7 Pro_T L2
ENSG00000088035 ALG6 -196840 sc-eQTL 3.23e-01 -0.087 0.0879 0.7 Pro_T L2
ENSG00000116641 DOCK7 482349 sc-eQTL 2.55e-01 -0.101 0.0881 0.7 Pro_T L2
ENSG00000125703 ATG4C 386603 sc-eQTL 7.03e-01 0.0295 0.0774 0.7 Pro_T L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 2.29e-01 0.0934 0.0774 0.7 Pro_T L2
ENSG00000162607 USP1 734438 sc-eQTL 5.45e-01 0.0323 0.0533 0.7 Pro_T L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 7.97e-01 -0.0232 0.0902 0.7 Pro_T L2
ENSG00000079739 PGM1 -422676 sc-eQTL 3.39e-01 -0.0878 0.0916 0.703 Treg L2
ENSG00000088035 ALG6 -196840 sc-eQTL 4.33e-01 -0.0769 0.098 0.703 Treg L2
ENSG00000116641 DOCK7 482349 sc-eQTL 2.43e-01 -0.105 0.0898 0.703 Treg L2
ENSG00000125703 ATG4C 386603 sc-eQTL 4.83e-01 -0.0647 0.092 0.703 Treg L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 5.51e-01 -0.0575 0.0963 0.703 Treg L2
ENSG00000162607 USP1 734438 sc-eQTL 3.29e-01 -0.091 0.093 0.703 Treg L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 4.09e-01 -0.0761 0.092 0.703 Treg L2
ENSG00000079739 PGM1 -422676 sc-eQTL 2.08e-01 0.116 0.092 0.71 cDC L2
ENSG00000088035 ALG6 -196840 sc-eQTL 4.54e-01 0.0702 0.0936 0.71 cDC L2
ENSG00000116641 DOCK7 482349 sc-eQTL 6.29e-01 -0.0444 0.0919 0.71 cDC L2
ENSG00000125703 ATG4C 386603 sc-eQTL 7.75e-01 -0.0229 0.0799 0.71 cDC L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 9.53e-01 0.00593 0.101 0.71 cDC L2
ENSG00000162607 USP1 734438 sc-eQTL 5.15e-01 -0.0587 0.09 0.71 cDC L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 9.44e-01 -0.00571 0.0813 0.71 cDC L2
ENSG00000079739 PGM1 -422676 sc-eQTL 3.22e-01 -0.0851 0.0857 0.703 cMono_IL1B L2
ENSG00000088035 ALG6 -196840 sc-eQTL 7.18e-01 -0.0311 0.086 0.703 cMono_IL1B L2
ENSG00000116641 DOCK7 482349 sc-eQTL 8.22e-01 0.0205 0.0907 0.703 cMono_IL1B L2
ENSG00000125703 ATG4C 386603 sc-eQTL 7.20e-01 0.0229 0.0638 0.703 cMono_IL1B L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 5.09e-01 0.0597 0.0903 0.703 cMono_IL1B L2
ENSG00000162607 USP1 734438 sc-eQTL 1.10e-01 -0.127 0.0792 0.703 cMono_IL1B L2
ENSG00000240563 L1TD1 975886 sc-eQTL 4.40e-01 0.0618 0.0799 0.703 cMono_IL1B L2
ENSG00000079739 PGM1 -422676 sc-eQTL 8.20e-01 0.0217 0.095 0.703 cMono_S100A L2
ENSG00000088035 ALG6 -196840 sc-eQTL 4.75e-02 0.19 0.0954 0.703 cMono_S100A L2
ENSG00000116641 DOCK7 482349 sc-eQTL 3.93e-01 -0.0763 0.0891 0.703 cMono_S100A L2
ENSG00000125703 ATG4C 386603 sc-eQTL 4.94e-01 -0.0528 0.0772 0.703 cMono_S100A L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 6.93e-01 -0.0345 0.0871 0.703 cMono_S100A L2
ENSG00000162607 USP1 734438 sc-eQTL 9.53e-01 0.00524 0.0897 0.703 cMono_S100A L2
ENSG00000240563 L1TD1 975886 sc-eQTL 3.52e-01 0.0694 0.0745 0.703 cMono_S100A L2
ENSG00000079739 PGM1 -422676 sc-eQTL 5.23e-01 -0.0692 0.108 0.724 gdT L2
ENSG00000088035 ALG6 -196840 sc-eQTL 4.91e-02 0.226 0.114 0.724 gdT L2
ENSG00000116641 DOCK7 482349 sc-eQTL 2.24e-01 0.137 0.113 0.724 gdT L2
ENSG00000125703 ATG4C 386603 sc-eQTL 6.93e-01 -0.0428 0.108 0.724 gdT L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 8.02e-01 0.0289 0.115 0.724 gdT L2
ENSG00000162607 USP1 734438 sc-eQTL 1.10e-01 -0.173 0.108 0.724 gdT L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 6.26e-04 -0.379 0.108 0.724 gdT L2
ENSG00000079739 PGM1 -422676 sc-eQTL 1.44e-01 -0.142 0.0968 0.709 intMono L2
ENSG00000088035 ALG6 -196840 sc-eQTL 7.09e-01 -0.0339 0.0906 0.709 intMono L2
ENSG00000116641 DOCK7 482349 sc-eQTL 4.29e-01 0.0732 0.0924 0.709 intMono L2
ENSG00000125703 ATG4C 386603 sc-eQTL 2.97e-01 -0.0921 0.0881 0.709 intMono L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 5.06e-01 -0.0648 0.0972 0.709 intMono L2
ENSG00000162607 USP1 734438 sc-eQTL 8.19e-02 -0.172 0.0982 0.709 intMono L2
ENSG00000240563 L1TD1 975886 sc-eQTL 7.27e-01 -0.0254 0.0728 0.709 intMono L2
ENSG00000079739 PGM1 -422676 sc-eQTL 4.52e-01 0.065 0.0863 0.699 ncMono L2
ENSG00000088035 ALG6 -196840 sc-eQTL 9.36e-01 -0.00757 0.0949 0.699 ncMono L2
ENSG00000116641 DOCK7 482349 sc-eQTL 5.55e-01 -0.0552 0.0933 0.699 ncMono L2
ENSG00000125703 ATG4C 386603 sc-eQTL 3.30e-01 -0.0851 0.087 0.699 ncMono L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 6.76e-01 -0.0381 0.0912 0.699 ncMono L2
ENSG00000162607 USP1 734438 sc-eQTL 5.26e-01 0.0592 0.0932 0.699 ncMono L2
ENSG00000240563 L1TD1 975886 sc-eQTL 5.72e-01 -0.0374 0.0661 0.699 ncMono L2
ENSG00000079739 PGM1 -422676 sc-eQTL 5.62e-01 0.0625 0.108 0.698 pDC L2
ENSG00000088035 ALG6 -196840 sc-eQTL 6.81e-01 0.0432 0.105 0.698 pDC L2
ENSG00000116641 DOCK7 482349 sc-eQTL 3.36e-01 0.103 0.107 0.698 pDC L2
ENSG00000125703 ATG4C 386603 sc-eQTL 2.95e-01 0.101 0.0958 0.698 pDC L2
ENSG00000142856 ITGB3BP -422986 sc-eQTL 4.92e-01 -0.0742 0.108 0.698 pDC L2
ENSG00000162607 USP1 734438 sc-eQTL 6.49e-02 -0.202 0.109 0.698 pDC L2
ENSG00000203965 EFCAB7 -352637 sc-eQTL 5.26e-01 0.0606 0.0954 0.698 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -422676 sc-eQTL 3.13e-01 -0.0916 0.0905 0.703 B_Memory LOneK1K
ENSG00000088035 ALG6 -196840 sc-eQTL 1.84e-01 -0.133 0.0999 0.703 B_Memory LOneK1K
ENSG00000116641 DOCK7 482349 sc-eQTL 7.65e-01 -0.0261 0.087 0.703 B_Memory LOneK1K
ENSG00000125703 ATG4C 386603 sc-eQTL 2.54e-01 -0.0802 0.0702 0.703 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -422986 sc-eQTL 2.79e-01 -0.1 0.0922 0.703 B_Memory LOneK1K
ENSG00000162607 USP1 734438 sc-eQTL 5.53e-01 -0.0533 0.0897 0.703 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -352637 sc-eQTL 7.80e-01 -0.027 0.0964 0.703 B_Memory LOneK1K
ENSG00000079739 PGM1 -422676 sc-eQTL 3.74e-01 0.0842 0.0944 0.703 B_Naive LOneK1K
ENSG00000088035 ALG6 -196840 sc-eQTL 5.07e-01 0.0647 0.0973 0.703 B_Naive LOneK1K
ENSG00000116641 DOCK7 482349 sc-eQTL 4.91e-01 0.0627 0.0909 0.703 B_Naive LOneK1K
ENSG00000125703 ATG4C 386603 sc-eQTL 4.07e-02 0.142 0.0687 0.703 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -422986 sc-eQTL 2.99e-01 -0.102 0.0979 0.703 B_Naive LOneK1K
ENSG00000162607 USP1 734438 sc-eQTL 3.45e-01 -0.0797 0.0841 0.703 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -352637 sc-eQTL 1.38e-01 -0.146 0.0981 0.703 B_Naive LOneK1K
ENSG00000079739 PGM1 -422676 sc-eQTL 8.08e-01 -0.0214 0.088 0.703 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -196840 sc-eQTL 3.62e-01 0.0777 0.0851 0.703 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 482349 sc-eQTL 8.68e-01 -0.0143 0.0858 0.703 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 386603 sc-eQTL 8.21e-01 -0.0134 0.0593 0.703 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -422986 sc-eQTL 6.76e-01 0.0367 0.0878 0.703 CD14_Mono LOneK1K
ENSG00000162607 USP1 734438 sc-eQTL 3.46e-01 -0.0706 0.0748 0.703 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 975886 sc-eQTL 3.03e-01 0.0837 0.0811 0.703 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -422676 sc-eQTL 2.22e-01 -0.102 0.0833 0.703 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -196840 sc-eQTL 9.57e-01 0.00516 0.0949 0.703 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 482349 sc-eQTL 8.39e-01 -0.0191 0.0939 0.703 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 386603 sc-eQTL 3.10e-01 -0.0813 0.0799 0.703 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -422986 sc-eQTL 8.30e-01 -0.02 0.0929 0.703 CD16_Mono LOneK1K
ENSG00000162607 USP1 734438 sc-eQTL 8.46e-01 -0.0169 0.0873 0.703 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 975886 sc-eQTL 9.42e-01 0.00431 0.0596 0.703 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -422676 sc-eQTL 7.56e-01 0.0227 0.073 0.707 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -196840 sc-eQTL 8.06e-01 0.0216 0.0877 0.707 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 482349 sc-eQTL 5.80e-01 -0.0435 0.0785 0.707 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 386603 sc-eQTL 3.82e-01 0.0685 0.0783 0.707 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -422986 sc-eQTL 7.49e-01 0.0298 0.0929 0.707 NK_CD56dim LOneK1K
ENSG00000162607 USP1 734438 sc-eQTL 5.92e-01 -0.0452 0.0843 0.707 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -352637 sc-eQTL 6.03e-01 -0.0534 0.103 0.707 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116652 \N -376347 1.27e-06 9.09e-07 3.58e-07 5.24e-07 2.71e-07 4.46e-07 1.02e-06 3.26e-07 1.1e-06 3.78e-07 1.33e-06 6.02e-07 1.57e-06 2.72e-07 4.19e-07 6.57e-07 8.28e-07 5.54e-07 5.72e-07 6.97e-07 4.44e-07 1.04e-06 7.39e-07 5.6e-07 1.86e-06 2.89e-07 6.85e-07 6.23e-07 9.65e-07 1.08e-06 5.43e-07 1.92e-07 1.87e-07 5.24e-07 4.49e-07 4.41e-07 4.92e-07 2.29e-07 2.18e-07 1.16e-07 3.02e-07 1.22e-06 8.31e-08 6.51e-08 1.52e-07 1.11e-07 2.29e-07 4.79e-08 1.14e-07
ENSG00000230798 \N -153706 4.41e-06 4.79e-06 7.1e-07 2.73e-06 1.62e-06 1.59e-06 4.07e-06 1.04e-06 4.93e-06 2.39e-06 4.91e-06 3.43e-06 7.5e-06 2.32e-06 1.45e-06 3.36e-06 1.83e-06 3.26e-06 1.57e-06 1.2e-06 3.07e-06 4.79e-06 3.67e-06 1.34e-06 5.93e-06 1.72e-06 2.55e-06 1.85e-06 4.3e-06 4.23e-06 2.53e-06 4.18e-07 6.5e-07 1.44e-06 2.2e-06 1.06e-06 1.02e-06 4.36e-07 9.24e-07 5.21e-07 7.35e-07 5.27e-06 4.37e-07 1.6e-07 5.92e-07 9.82e-07 1.16e-06 6.86e-07 4.98e-07