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Genes within 1Mb (chr1:63169537:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -423874 sc-eQTL 8.85e-01 0.0119 0.0823 0.705 B L1
ENSG00000088035 ALG6 -198038 sc-eQTL 9.95e-01 -0.000569 0.0853 0.705 B L1
ENSG00000116641 DOCK7 481151 sc-eQTL 4.46e-01 0.0651 0.0852 0.705 B L1
ENSG00000125703 ATG4C 385405 sc-eQTL 1.62e-01 0.0828 0.059 0.705 B L1
ENSG00000142856 ITGB3BP -424184 sc-eQTL 2.48e-01 -0.109 0.094 0.705 B L1
ENSG00000162607 USP1 733240 sc-eQTL 1.36e-01 -0.122 0.0815 0.705 B L1
ENSG00000203965 EFCAB7 -353835 sc-eQTL 1.38e-01 -0.143 0.0961 0.705 B L1
ENSG00000079739 PGM1 -423874 sc-eQTL 7.68e-01 0.0205 0.0694 0.705 CD4T L1
ENSG00000088035 ALG6 -198038 sc-eQTL 9.78e-01 -0.00207 0.0766 0.705 CD4T L1
ENSG00000116641 DOCK7 481151 sc-eQTL 7.66e-01 0.0231 0.0775 0.705 CD4T L1
ENSG00000125703 ATG4C 385405 sc-eQTL 3.36e-01 0.0603 0.0625 0.705 CD4T L1
ENSG00000142856 ITGB3BP -424184 sc-eQTL 3.91e-02 -0.183 0.088 0.705 CD4T L1
ENSG00000162607 USP1 733240 sc-eQTL 9.33e-01 0.00515 0.0608 0.705 CD4T L1
ENSG00000203965 EFCAB7 -353835 sc-eQTL 7.41e-01 0.0264 0.0798 0.705 CD4T L1
ENSG00000079739 PGM1 -423874 sc-eQTL 8.86e-01 0.0111 0.077 0.705 CD8T L1
ENSG00000088035 ALG6 -198038 sc-eQTL 7.03e-01 -0.0324 0.0849 0.705 CD8T L1
ENSG00000116641 DOCK7 481151 sc-eQTL 3.71e-01 0.0771 0.0859 0.705 CD8T L1
ENSG00000125703 ATG4C 385405 sc-eQTL 7.05e-02 0.147 0.0811 0.705 CD8T L1
ENSG00000142856 ITGB3BP -424184 sc-eQTL 6.90e-01 -0.0365 0.0914 0.705 CD8T L1
ENSG00000162607 USP1 733240 sc-eQTL 7.26e-02 -0.128 0.0707 0.705 CD8T L1
ENSG00000203965 EFCAB7 -353835 sc-eQTL 1.53e-01 -0.13 0.0907 0.705 CD8T L1
ENSG00000079739 PGM1 -423874 sc-eQTL 1.53e-01 0.123 0.0854 0.705 DC L1
ENSG00000088035 ALG6 -198038 sc-eQTL 2.30e-01 0.106 0.0882 0.705 DC L1
ENSG00000116641 DOCK7 481151 sc-eQTL 8.81e-01 -0.0136 0.0907 0.705 DC L1
ENSG00000125703 ATG4C 385405 sc-eQTL 9.43e-01 0.00504 0.071 0.705 DC L1
ENSG00000142856 ITGB3BP -424184 sc-eQTL 1.01e-01 -0.162 0.0986 0.705 DC L1
ENSG00000162607 USP1 733240 sc-eQTL 1.71e-02 -0.206 0.0854 0.705 DC L1
ENSG00000203965 EFCAB7 -353835 sc-eQTL 4.12e-01 0.0709 0.0863 0.705 DC L1
ENSG00000079739 PGM1 -423874 sc-eQTL 5.60e-01 -0.0486 0.0832 0.705 Mono L1
ENSG00000088035 ALG6 -198038 sc-eQTL 1.46e-01 0.126 0.0865 0.705 Mono L1
ENSG00000116641 DOCK7 481151 sc-eQTL 3.64e-01 -0.0764 0.0839 0.705 Mono L1
ENSG00000125703 ATG4C 385405 sc-eQTL 5.21e-01 -0.0365 0.0568 0.705 Mono L1
ENSG00000142856 ITGB3BP -424184 sc-eQTL 9.60e-01 0.00454 0.0898 0.705 Mono L1
ENSG00000162607 USP1 733240 sc-eQTL 7.50e-01 -0.0236 0.0737 0.705 Mono L1
ENSG00000240563 L1TD1 974688 sc-eQTL 4.33e-01 0.0539 0.0687 0.705 Mono L1
ENSG00000079739 PGM1 -423874 sc-eQTL 7.07e-01 0.0272 0.0723 0.706 NK L1
ENSG00000088035 ALG6 -198038 sc-eQTL 8.03e-01 0.0212 0.0847 0.706 NK L1
ENSG00000116641 DOCK7 481151 sc-eQTL 2.60e-01 -0.0786 0.0696 0.706 NK L1
ENSG00000125703 ATG4C 385405 sc-eQTL 5.27e-01 0.0475 0.0749 0.706 NK L1
ENSG00000142856 ITGB3BP -424184 sc-eQTL 3.46e-01 0.0877 0.093 0.706 NK L1
ENSG00000162607 USP1 733240 sc-eQTL 9.12e-01 -0.00925 0.0833 0.706 NK L1
ENSG00000203965 EFCAB7 -353835 sc-eQTL 5.30e-01 -0.0636 0.101 0.706 NK L1
ENSG00000079739 PGM1 -423874 sc-eQTL 9.27e-01 0.00745 0.0817 0.705 Other_T L1
ENSG00000088035 ALG6 -198038 sc-eQTL 5.89e-01 -0.0444 0.082 0.705 Other_T L1
ENSG00000116641 DOCK7 481151 sc-eQTL 4.93e-01 0.0574 0.0837 0.705 Other_T L1
ENSG00000125703 ATG4C 385405 sc-eQTL 8.37e-02 0.125 0.072 0.705 Other_T L1
ENSG00000142856 ITGB3BP -424184 sc-eQTL 2.32e-01 0.0768 0.0641 0.705 Other_T L1
ENSG00000162607 USP1 733240 sc-eQTL 2.93e-01 -0.0586 0.0556 0.705 Other_T L1
ENSG00000203965 EFCAB7 -353835 sc-eQTL 7.50e-02 -0.176 0.0985 0.705 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -423874 sc-eQTL 5.83e-01 0.0584 0.106 0.694 B_Activated L2
ENSG00000088035 ALG6 -198038 sc-eQTL 5.83e-01 -0.0559 0.102 0.694 B_Activated L2
ENSG00000116641 DOCK7 481151 sc-eQTL 4.52e-01 -0.0713 0.0946 0.694 B_Activated L2
ENSG00000125703 ATG4C 385405 sc-eQTL 5.43e-01 -0.0608 0.0996 0.694 B_Activated L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 3.48e-01 -0.0915 0.0972 0.694 B_Activated L2
ENSG00000162607 USP1 733240 sc-eQTL 4.81e-01 0.0745 0.105 0.694 B_Activated L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 2.18e-01 -0.114 0.0918 0.694 B_Activated L2
ENSG00000079739 PGM1 -423874 sc-eQTL 3.73e-01 -0.088 0.0985 0.706 B_Intermediate L2
ENSG00000088035 ALG6 -198038 sc-eQTL 1.41e-01 -0.148 0.0998 0.706 B_Intermediate L2
ENSG00000116641 DOCK7 481151 sc-eQTL 9.32e-01 0.0082 0.0958 0.706 B_Intermediate L2
ENSG00000125703 ATG4C 385405 sc-eQTL 9.93e-01 0.000683 0.0811 0.706 B_Intermediate L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 4.21e-01 -0.0778 0.0964 0.706 B_Intermediate L2
ENSG00000162607 USP1 733240 sc-eQTL 6.69e-01 -0.0412 0.0964 0.706 B_Intermediate L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 2.68e-01 -0.106 0.0954 0.706 B_Intermediate L2
ENSG00000079739 PGM1 -423874 sc-eQTL 8.06e-01 -0.0242 0.0982 0.711 B_Memory L2
ENSG00000088035 ALG6 -198038 sc-eQTL 6.15e-01 -0.0502 0.0998 0.711 B_Memory L2
ENSG00000116641 DOCK7 481151 sc-eQTL 2.49e-01 0.108 0.0934 0.711 B_Memory L2
ENSG00000125703 ATG4C 385405 sc-eQTL 5.99e-01 -0.0469 0.089 0.711 B_Memory L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 4.28e-01 -0.0808 0.102 0.711 B_Memory L2
ENSG00000162607 USP1 733240 sc-eQTL 1.49e-01 -0.148 0.102 0.711 B_Memory L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 3.06e-01 0.103 0.101 0.711 B_Memory L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.82e-01 0.13 0.0973 0.705 B_Naive1 L2
ENSG00000088035 ALG6 -198038 sc-eQTL 8.71e-01 0.016 0.0981 0.705 B_Naive1 L2
ENSG00000116641 DOCK7 481151 sc-eQTL 6.78e-01 0.0391 0.094 0.705 B_Naive1 L2
ENSG00000125703 ATG4C 385405 sc-eQTL 1.04e-02 0.184 0.0713 0.705 B_Naive1 L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 3.06e-01 -0.0984 0.0958 0.705 B_Naive1 L2
ENSG00000162607 USP1 733240 sc-eQTL 9.35e-01 0.00686 0.0845 0.705 B_Naive1 L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 1.72e-02 -0.243 0.101 0.705 B_Naive1 L2
ENSG00000079739 PGM1 -423874 sc-eQTL 4.32e-01 0.0757 0.0962 0.708 B_Naive2 L2
ENSG00000088035 ALG6 -198038 sc-eQTL 3.14e-01 0.101 0.1 0.708 B_Naive2 L2
ENSG00000116641 DOCK7 481151 sc-eQTL 9.52e-01 -0.00587 0.0966 0.708 B_Naive2 L2
ENSG00000125703 ATG4C 385405 sc-eQTL 5.43e-01 0.0566 0.0929 0.708 B_Naive2 L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 4.20e-01 -0.0813 0.101 0.708 B_Naive2 L2
ENSG00000162607 USP1 733240 sc-eQTL 3.27e-02 -0.204 0.095 0.708 B_Naive2 L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 9.68e-01 0.004 0.1 0.708 B_Naive2 L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.02e-01 0.159 0.0969 0.707 CD4_CTL L2
ENSG00000088035 ALG6 -198038 sc-eQTL 3.08e-01 -0.105 0.103 0.707 CD4_CTL L2
ENSG00000116641 DOCK7 481151 sc-eQTL 6.99e-01 -0.0349 0.0902 0.707 CD4_CTL L2
ENSG00000125703 ATG4C 385405 sc-eQTL 1.65e-01 -0.129 0.0929 0.707 CD4_CTL L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 3.23e-02 -0.213 0.0986 0.707 CD4_CTL L2
ENSG00000162607 USP1 733240 sc-eQTL 5.99e-01 0.05 0.0949 0.707 CD4_CTL L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 3.81e-01 0.083 0.0946 0.707 CD4_CTL L2
ENSG00000079739 PGM1 -423874 sc-eQTL 3.69e-01 0.0701 0.0778 0.705 CD4_Naive L2
ENSG00000088035 ALG6 -198038 sc-eQTL 4.69e-01 0.0613 0.0846 0.705 CD4_Naive L2
ENSG00000116641 DOCK7 481151 sc-eQTL 1.60e-01 0.117 0.0828 0.705 CD4_Naive L2
ENSG00000125703 ATG4C 385405 sc-eQTL 5.15e-01 0.0479 0.0735 0.705 CD4_Naive L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 1.50e-01 -0.129 0.0894 0.705 CD4_Naive L2
ENSG00000162607 USP1 733240 sc-eQTL 5.88e-01 0.0372 0.0686 0.705 CD4_Naive L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 6.31e-01 0.0429 0.0892 0.705 CD4_Naive L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.28e-01 -0.123 0.0805 0.705 CD4_TCM L2
ENSG00000088035 ALG6 -198038 sc-eQTL 7.53e-01 -0.0296 0.0939 0.705 CD4_TCM L2
ENSG00000116641 DOCK7 481151 sc-eQTL 1.26e-01 -0.127 0.0828 0.705 CD4_TCM L2
ENSG00000125703 ATG4C 385405 sc-eQTL 3.57e-02 0.17 0.0802 0.705 CD4_TCM L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 1.12e-01 -0.152 0.095 0.705 CD4_TCM L2
ENSG00000162607 USP1 733240 sc-eQTL 1.91e-01 -0.102 0.078 0.705 CD4_TCM L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 8.07e-01 -0.0226 0.0925 0.705 CD4_TCM L2
ENSG00000079739 PGM1 -423874 sc-eQTL 5.03e-01 0.0641 0.0955 0.705 CD4_TEM L2
ENSG00000088035 ALG6 -198038 sc-eQTL 6.36e-01 0.0455 0.096 0.705 CD4_TEM L2
ENSG00000116641 DOCK7 481151 sc-eQTL 9.12e-01 -0.0104 0.0936 0.705 CD4_TEM L2
ENSG00000125703 ATG4C 385405 sc-eQTL 2.66e-01 0.101 0.0907 0.705 CD4_TEM L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 2.67e-02 -0.207 0.0928 0.705 CD4_TEM L2
ENSG00000162607 USP1 733240 sc-eQTL 6.07e-01 -0.0458 0.0889 0.705 CD4_TEM L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 3.15e-01 0.0978 0.097 0.705 CD4_TEM L2
ENSG00000079739 PGM1 -423874 sc-eQTL 5.83e-01 0.049 0.0891 0.705 CD8_CTL L2
ENSG00000088035 ALG6 -198038 sc-eQTL 3.54e-01 -0.088 0.0946 0.705 CD8_CTL L2
ENSG00000116641 DOCK7 481151 sc-eQTL 5.84e-01 0.0493 0.0899 0.705 CD8_CTL L2
ENSG00000125703 ATG4C 385405 sc-eQTL 8.41e-01 -0.0192 0.0957 0.705 CD8_CTL L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 8.06e-01 -0.0245 0.0995 0.705 CD8_CTL L2
ENSG00000162607 USP1 733240 sc-eQTL 3.46e-01 -0.0841 0.089 0.705 CD8_CTL L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 6.35e-01 -0.0484 0.102 0.705 CD8_CTL L2
ENSG00000079739 PGM1 -423874 sc-eQTL 6.78e-01 -0.0371 0.089 0.705 CD8_Naive L2
ENSG00000088035 ALG6 -198038 sc-eQTL 4.73e-02 0.182 0.0913 0.705 CD8_Naive L2
ENSG00000116641 DOCK7 481151 sc-eQTL 4.47e-01 0.0726 0.0952 0.705 CD8_Naive L2
ENSG00000125703 ATG4C 385405 sc-eQTL 3.71e-01 0.0819 0.0913 0.705 CD8_Naive L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 1.30e-01 -0.14 0.0922 0.705 CD8_Naive L2
ENSG00000162607 USP1 733240 sc-eQTL 2.16e-01 -0.0969 0.0781 0.705 CD8_Naive L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 5.81e-01 -0.0483 0.0873 0.705 CD8_Naive L2
ENSG00000079739 PGM1 -423874 sc-eQTL 6.86e-01 0.0393 0.0969 0.701 CD8_TCM L2
ENSG00000088035 ALG6 -198038 sc-eQTL 3.66e-01 0.0887 0.0979 0.701 CD8_TCM L2
ENSG00000116641 DOCK7 481151 sc-eQTL 8.62e-02 0.164 0.095 0.701 CD8_TCM L2
ENSG00000125703 ATG4C 385405 sc-eQTL 4.63e-01 0.0719 0.0978 0.701 CD8_TCM L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 8.35e-01 -0.0199 0.0951 0.701 CD8_TCM L2
ENSG00000162607 USP1 733240 sc-eQTL 3.25e-01 -0.0902 0.0913 0.701 CD8_TCM L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 3.41e-01 -0.0924 0.0968 0.701 CD8_TCM L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.69e-01 -0.138 0.1 0.705 CD8_TEM L2
ENSG00000088035 ALG6 -198038 sc-eQTL 8.23e-01 -0.0227 0.101 0.705 CD8_TEM L2
ENSG00000116641 DOCK7 481151 sc-eQTL 9.11e-01 0.011 0.098 0.705 CD8_TEM L2
ENSG00000125703 ATG4C 385405 sc-eQTL 6.85e-01 0.0383 0.0942 0.705 CD8_TEM L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 8.64e-01 -0.0175 0.102 0.705 CD8_TEM L2
ENSG00000162607 USP1 733240 sc-eQTL 3.83e-01 -0.0849 0.0971 0.705 CD8_TEM L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 9.25e-02 -0.166 0.0982 0.705 CD8_TEM L2
ENSG00000079739 PGM1 -423874 sc-eQTL 8.31e-01 -0.0202 0.0944 0.706 MAIT L2
ENSG00000088035 ALG6 -198038 sc-eQTL 7.55e-01 -0.0292 0.0935 0.706 MAIT L2
ENSG00000116641 DOCK7 481151 sc-eQTL 2.23e-01 0.109 0.0893 0.706 MAIT L2
ENSG00000125703 ATG4C 385405 sc-eQTL 2.94e-02 0.205 0.0934 0.706 MAIT L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 4.91e-01 -0.0653 0.0945 0.706 MAIT L2
ENSG00000162607 USP1 733240 sc-eQTL 1.35e-01 -0.14 0.0934 0.706 MAIT L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 9.65e-01 -0.0043 0.0974 0.706 MAIT L2
ENSG00000079739 PGM1 -423874 sc-eQTL 4.45e-01 0.0723 0.0946 0.711 NK_CD56bright L2
ENSG00000088035 ALG6 -198038 sc-eQTL 3.36e-01 -0.0934 0.0969 0.711 NK_CD56bright L2
ENSG00000116641 DOCK7 481151 sc-eQTL 6.98e-01 -0.0326 0.0841 0.711 NK_CD56bright L2
ENSG00000125703 ATG4C 385405 sc-eQTL 4.06e-01 0.0781 0.0938 0.711 NK_CD56bright L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 9.06e-01 0.0116 0.0978 0.711 NK_CD56bright L2
ENSG00000162607 USP1 733240 sc-eQTL 2.12e-01 0.126 0.101 0.711 NK_CD56bright L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 9.73e-01 -0.00323 0.0965 0.711 NK_CD56bright L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.68e-01 0.104 0.0753 0.709 NK_CD56dim L2
ENSG00000088035 ALG6 -198038 sc-eQTL 4.66e-01 -0.07 0.0958 0.709 NK_CD56dim L2
ENSG00000116641 DOCK7 481151 sc-eQTL 3.05e-01 -0.0856 0.0832 0.709 NK_CD56dim L2
ENSG00000125703 ATG4C 385405 sc-eQTL 2.86e-01 0.0904 0.0845 0.709 NK_CD56dim L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 5.35e-01 0.0598 0.0964 0.709 NK_CD56dim L2
ENSG00000162607 USP1 733240 sc-eQTL 9.58e-01 0.00494 0.0936 0.709 NK_CD56dim L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 9.26e-01 -0.00975 0.104 0.709 NK_CD56dim L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.06e-01 -0.168 0.103 0.712 NK_HLA L2
ENSG00000088035 ALG6 -198038 sc-eQTL 2.90e-01 0.114 0.107 0.712 NK_HLA L2
ENSG00000116641 DOCK7 481151 sc-eQTL 8.91e-01 -0.0113 0.0823 0.712 NK_HLA L2
ENSG00000125703 ATG4C 385405 sc-eQTL 5.49e-01 0.0574 0.0956 0.712 NK_HLA L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 8.60e-01 -0.0177 0.1 0.712 NK_HLA L2
ENSG00000162607 USP1 733240 sc-eQTL 1.65e-01 0.146 0.105 0.712 NK_HLA L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 9.37e-01 -0.00763 0.0957 0.712 NK_HLA L2
ENSG00000079739 PGM1 -423874 sc-eQTL 6.98e-01 0.0319 0.082 0.709 NK_cytokine L2
ENSG00000088035 ALG6 -198038 sc-eQTL 7.10e-01 0.0345 0.0927 0.709 NK_cytokine L2
ENSG00000116641 DOCK7 481151 sc-eQTL 6.59e-01 0.0379 0.0858 0.709 NK_cytokine L2
ENSG00000125703 ATG4C 385405 sc-eQTL 1.75e-01 0.119 0.0875 0.709 NK_cytokine L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 8.00e-01 -0.0231 0.091 0.709 NK_cytokine L2
ENSG00000162607 USP1 733240 sc-eQTL 6.26e-01 -0.0466 0.0956 0.709 NK_cytokine L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 5.35e-01 -0.0602 0.0969 0.709 NK_cytokine L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.10e-01 -0.18 0.112 0.685 PB L2
ENSG00000088035 ALG6 -198038 sc-eQTL 6.98e-01 0.0462 0.119 0.685 PB L2
ENSG00000116641 DOCK7 481151 sc-eQTL 3.45e-01 -0.12 0.126 0.685 PB L2
ENSG00000125703 ATG4C 385405 sc-eQTL 2.87e-02 0.24 0.108 0.685 PB L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 1.92e-01 0.144 0.11 0.685 PB L2
ENSG00000162607 USP1 733240 sc-eQTL 5.05e-01 0.0733 0.11 0.685 PB L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 6.97e-01 -0.0473 0.121 0.685 PB L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.68e-01 -0.121 0.0872 0.702 Pro_T L2
ENSG00000088035 ALG6 -198038 sc-eQTL 3.33e-01 -0.0863 0.0889 0.702 Pro_T L2
ENSG00000116641 DOCK7 481151 sc-eQTL 2.32e-01 -0.107 0.0891 0.702 Pro_T L2
ENSG00000125703 ATG4C 385405 sc-eQTL 7.58e-01 0.0242 0.0783 0.702 Pro_T L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 2.18e-01 0.0967 0.0782 0.702 Pro_T L2
ENSG00000162607 USP1 733240 sc-eQTL 6.48e-01 0.0247 0.054 0.702 Pro_T L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 7.59e-01 -0.0281 0.0912 0.702 Pro_T L2
ENSG00000079739 PGM1 -423874 sc-eQTL 3.03e-01 -0.0957 0.0926 0.705 Treg L2
ENSG00000088035 ALG6 -198038 sc-eQTL 4.32e-01 -0.078 0.0991 0.705 Treg L2
ENSG00000116641 DOCK7 481151 sc-eQTL 2.22e-01 -0.111 0.0908 0.705 Treg L2
ENSG00000125703 ATG4C 385405 sc-eQTL 5.54e-01 -0.0552 0.0931 0.705 Treg L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 4.37e-01 -0.0757 0.0973 0.705 Treg L2
ENSG00000162607 USP1 733240 sc-eQTL 3.81e-01 -0.0827 0.0941 0.705 Treg L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 2.82e-01 -0.1 0.093 0.705 Treg L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.86e-01 0.124 0.0934 0.712 cDC L2
ENSG00000088035 ALG6 -198038 sc-eQTL 4.03e-01 0.0797 0.095 0.712 cDC L2
ENSG00000116641 DOCK7 481151 sc-eQTL 5.18e-01 -0.0605 0.0933 0.712 cDC L2
ENSG00000125703 ATG4C 385405 sc-eQTL 7.12e-01 -0.03 0.0811 0.712 cDC L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 9.19e-01 -0.0104 0.103 0.712 cDC L2
ENSG00000162607 USP1 733240 sc-eQTL 4.01e-01 -0.0768 0.0914 0.712 cDC L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 8.94e-01 -0.011 0.0826 0.712 cDC L2
ENSG00000079739 PGM1 -423874 sc-eQTL 3.48e-01 -0.0817 0.0868 0.705 cMono_IL1B L2
ENSG00000088035 ALG6 -198038 sc-eQTL 7.48e-01 -0.028 0.0871 0.705 cMono_IL1B L2
ENSG00000116641 DOCK7 481151 sc-eQTL 7.80e-01 0.0257 0.0918 0.705 cMono_IL1B L2
ENSG00000125703 ATG4C 385405 sc-eQTL 6.64e-01 0.0281 0.0646 0.705 cMono_IL1B L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 5.85e-01 0.05 0.0914 0.705 cMono_IL1B L2
ENSG00000162607 USP1 733240 sc-eQTL 8.94e-02 -0.137 0.0801 0.705 cMono_IL1B L2
ENSG00000240563 L1TD1 974688 sc-eQTL 4.83e-01 0.0569 0.081 0.705 cMono_IL1B L2
ENSG00000079739 PGM1 -423874 sc-eQTL 9.28e-01 0.0087 0.0961 0.705 cMono_S100A L2
ENSG00000088035 ALG6 -198038 sc-eQTL 4.07e-02 0.199 0.0965 0.705 cMono_S100A L2
ENSG00000116641 DOCK7 481151 sc-eQTL 4.44e-01 -0.0692 0.0902 0.705 cMono_S100A L2
ENSG00000125703 ATG4C 385405 sc-eQTL 4.05e-01 -0.0652 0.0781 0.705 cMono_S100A L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 6.50e-01 -0.04 0.0882 0.705 cMono_S100A L2
ENSG00000162607 USP1 733240 sc-eQTL 9.11e-01 0.0102 0.0908 0.705 cMono_S100A L2
ENSG00000240563 L1TD1 974688 sc-eQTL 3.68e-01 0.068 0.0754 0.705 cMono_S100A L2
ENSG00000079739 PGM1 -423874 sc-eQTL 4.60e-01 -0.0816 0.11 0.727 gdT L2
ENSG00000088035 ALG6 -198038 sc-eQTL 6.13e-02 0.219 0.116 0.727 gdT L2
ENSG00000116641 DOCK7 481151 sc-eQTL 2.44e-01 0.134 0.115 0.727 gdT L2
ENSG00000125703 ATG4C 385405 sc-eQTL 6.56e-01 -0.0491 0.11 0.727 gdT L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 8.17e-01 0.0271 0.117 0.727 gdT L2
ENSG00000162607 USP1 733240 sc-eQTL 1.18e-01 -0.173 0.11 0.727 gdT L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 1.57e-03 -0.358 0.111 0.727 gdT L2
ENSG00000079739 PGM1 -423874 sc-eQTL 1.08e-01 -0.158 0.0979 0.711 intMono L2
ENSG00000088035 ALG6 -198038 sc-eQTL 6.22e-01 -0.0453 0.0917 0.711 intMono L2
ENSG00000116641 DOCK7 481151 sc-eQTL 5.06e-01 0.0623 0.0936 0.711 intMono L2
ENSG00000125703 ATG4C 385405 sc-eQTL 3.91e-01 -0.0767 0.0893 0.711 intMono L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 7.13e-01 -0.0363 0.0985 0.711 intMono L2
ENSG00000162607 USP1 733240 sc-eQTL 8.15e-02 -0.174 0.0995 0.711 intMono L2
ENSG00000240563 L1TD1 974688 sc-eQTL 7.25e-01 -0.0259 0.0737 0.711 intMono L2
ENSG00000079739 PGM1 -423874 sc-eQTL 4.86e-01 0.061 0.0873 0.701 ncMono L2
ENSG00000088035 ALG6 -198038 sc-eQTL 8.90e-01 -0.0132 0.096 0.701 ncMono L2
ENSG00000116641 DOCK7 481151 sc-eQTL 5.95e-01 -0.0503 0.0944 0.701 ncMono L2
ENSG00000125703 ATG4C 385405 sc-eQTL 3.84e-01 -0.0769 0.0881 0.701 ncMono L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 8.13e-01 -0.0219 0.0923 0.701 ncMono L2
ENSG00000162607 USP1 733240 sc-eQTL 5.52e-01 0.0561 0.0943 0.701 ncMono L2
ENSG00000240563 L1TD1 974688 sc-eQTL 5.87e-01 -0.0364 0.0669 0.701 ncMono L2
ENSG00000079739 PGM1 -423874 sc-eQTL 5.90e-01 0.0592 0.11 0.701 pDC L2
ENSG00000088035 ALG6 -198038 sc-eQTL 7.97e-01 0.0275 0.107 0.701 pDC L2
ENSG00000116641 DOCK7 481151 sc-eQTL 3.38e-01 0.105 0.109 0.701 pDC L2
ENSG00000125703 ATG4C 385405 sc-eQTL 2.69e-01 0.108 0.0975 0.701 pDC L2
ENSG00000142856 ITGB3BP -424184 sc-eQTL 5.15e-01 -0.0715 0.11 0.701 pDC L2
ENSG00000162607 USP1 733240 sc-eQTL 9.19e-02 -0.188 0.111 0.701 pDC L2
ENSG00000203965 EFCAB7 -353835 sc-eQTL 4.98e-01 0.0659 0.0971 0.701 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -423874 sc-eQTL 3.57e-01 -0.0845 0.0916 0.705 B_Memory LOneK1K
ENSG00000088035 ALG6 -198038 sc-eQTL 2.01e-01 -0.13 0.101 0.705 B_Memory LOneK1K
ENSG00000116641 DOCK7 481151 sc-eQTL 7.02e-01 -0.0338 0.088 0.705 B_Memory LOneK1K
ENSG00000125703 ATG4C 385405 sc-eQTL 1.97e-01 -0.0917 0.0709 0.705 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -424184 sc-eQTL 2.32e-01 -0.112 0.0932 0.705 B_Memory LOneK1K
ENSG00000162607 USP1 733240 sc-eQTL 6.04e-01 -0.0471 0.0907 0.705 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -353835 sc-eQTL 6.92e-01 -0.0386 0.0974 0.705 B_Memory LOneK1K
ENSG00000079739 PGM1 -423874 sc-eQTL 3.18e-01 0.0954 0.0953 0.705 B_Naive LOneK1K
ENSG00000088035 ALG6 -198038 sc-eQTL 5.10e-01 0.0649 0.0983 0.705 B_Naive LOneK1K
ENSG00000116641 DOCK7 481151 sc-eQTL 5.18e-01 0.0594 0.0918 0.705 B_Naive LOneK1K
ENSG00000125703 ATG4C 385405 sc-eQTL 4.46e-02 0.14 0.0694 0.705 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -424184 sc-eQTL 2.86e-01 -0.106 0.0988 0.705 B_Naive LOneK1K
ENSG00000162607 USP1 733240 sc-eQTL 3.16e-01 -0.0854 0.0849 0.705 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -353835 sc-eQTL 1.09e-01 -0.159 0.099 0.705 B_Naive LOneK1K
ENSG00000079739 PGM1 -423874 sc-eQTL 7.68e-01 -0.0263 0.089 0.705 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -198038 sc-eQTL 3.37e-01 0.0828 0.086 0.705 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 481151 sc-eQTL 9.40e-01 -0.0065 0.0868 0.705 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 385405 sc-eQTL 8.27e-01 -0.0131 0.06 0.705 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -424184 sc-eQTL 7.77e-01 0.0251 0.0888 0.705 CD14_Mono LOneK1K
ENSG00000162607 USP1 733240 sc-eQTL 3.21e-01 -0.0753 0.0757 0.705 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 974688 sc-eQTL 3.38e-01 0.0788 0.0821 0.705 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -423874 sc-eQTL 1.76e-01 -0.114 0.0841 0.705 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -198038 sc-eQTL 9.70e-01 -0.00355 0.0959 0.705 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 481151 sc-eQTL 8.47e-01 -0.0183 0.0948 0.705 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 385405 sc-eQTL 3.99e-01 -0.0683 0.0807 0.705 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -424184 sc-eQTL 9.73e-01 0.00317 0.0939 0.705 CD16_Mono LOneK1K
ENSG00000162607 USP1 733240 sc-eQTL 7.86e-01 -0.0239 0.0882 0.705 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 974688 sc-eQTL 9.29e-01 0.00535 0.0602 0.705 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -423874 sc-eQTL 7.42e-01 0.0243 0.0737 0.709 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -198038 sc-eQTL 7.68e-01 0.0261 0.0885 0.709 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 481151 sc-eQTL 5.50e-01 -0.0474 0.0792 0.709 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 385405 sc-eQTL 3.89e-01 0.0681 0.079 0.709 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -424184 sc-eQTL 6.99e-01 0.0363 0.0937 0.709 NK_CD56dim LOneK1K
ENSG00000162607 USP1 733240 sc-eQTL 6.24e-01 -0.0418 0.0851 0.709 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -353835 sc-eQTL 6.05e-01 -0.0537 0.103 0.709 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -423874 eQTL 0.11 0.0316 0.0198 0.00119 0.0 0.268
ENSG00000116652 DLEU2L -377545 eQTL 0.0196 0.067 0.0287 0.00175 0.0 0.268

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116652 DLEU2L -377545 8.43e-07 5.67e-07 6.72e-08 2.36e-07 9.8e-08 1.25e-07 1.16e-06 5.4e-08 2.66e-07 6.75e-08 2.98e-07 8.55e-08 1.1e-06 1.1e-07 1.5e-07 1.76e-07 1.17e-07 3.44e-07 7.29e-08 4.45e-08 1.39e-07 2.3e-07 4.74e-07 2.83e-08 6.39e-07 2e-07 1.25e-07 1.06e-07 5.42e-07 3.3e-07 2.55e-07 3.7e-08 3.35e-08 9.76e-08 5.16e-08 3.94e-08 4.75e-08 9.35e-08 6.63e-08 6.55e-08 4.18e-08 7.54e-07 5.21e-08 1.82e-08 6.92e-08 8.59e-09 1.26e-07 4.26e-09 5.04e-08
ENSG00000230798 \N -154904 4.41e-06 5.24e-06 5.84e-07 2.46e-06 8.92e-07 8.28e-07 1.01e-05 4.97e-07 3.4e-06 1.03e-06 4.17e-06 1.29e-06 9.25e-06 2.04e-06 9.52e-07 2.21e-06 1.92e-06 2.75e-06 1.42e-06 1.37e-06 1.87e-06 3.5e-06 6.75e-06 1.66e-06 5.59e-06 1.62e-06 1.42e-06 1.72e-06 7.59e-06 3.61e-06 1.95e-06 4.56e-07 3.72e-07 1.24e-06 1.82e-06 7.36e-07 7.05e-07 3.18e-07 1.33e-06 3.64e-07 2.71e-07 5.74e-06 3.77e-07 1.75e-07 2.81e-07 5.87e-07 3.8e-07 2.26e-07 2.14e-07