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Genes within 1Mb (chr1:63160531:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -432880 sc-eQTL 4.33e-01 0.0612 0.0779 0.333 B L1
ENSG00000088035 ALG6 -207044 sc-eQTL 7.68e-01 -0.0239 0.0808 0.333 B L1
ENSG00000116641 DOCK7 472145 sc-eQTL 3.29e-01 -0.0789 0.0806 0.333 B L1
ENSG00000125703 ATG4C 376399 sc-eQTL 7.45e-02 0.0999 0.0558 0.333 B L1
ENSG00000142856 ITGB3BP -433190 sc-eQTL 8.46e-01 0.0174 0.0894 0.333 B L1
ENSG00000162607 USP1 724234 sc-eQTL 4.65e-01 0.0567 0.0775 0.333 B L1
ENSG00000203965 EFCAB7 -362841 sc-eQTL 4.69e-01 0.0663 0.0915 0.333 B L1
ENSG00000079739 PGM1 -432880 sc-eQTL 6.85e-02 0.122 0.0667 0.333 CD4T L1
ENSG00000088035 ALG6 -207044 sc-eQTL 8.33e-01 0.0157 0.0742 0.333 CD4T L1
ENSG00000116641 DOCK7 472145 sc-eQTL 1.24e-02 -0.187 0.074 0.333 CD4T L1
ENSG00000125703 ATG4C 376399 sc-eQTL 5.31e-01 0.038 0.0606 0.333 CD4T L1
ENSG00000142856 ITGB3BP -433190 sc-eQTL 9.45e-02 0.144 0.0855 0.333 CD4T L1
ENSG00000162607 USP1 724234 sc-eQTL 2.73e-01 -0.0644 0.0587 0.333 CD4T L1
ENSG00000203965 EFCAB7 -362841 sc-eQTL 2.28e-01 0.0931 0.077 0.333 CD4T L1
ENSG00000079739 PGM1 -432880 sc-eQTL 5.67e-01 -0.0426 0.0743 0.333 CD8T L1
ENSG00000088035 ALG6 -207044 sc-eQTL 6.12e-01 0.0416 0.0819 0.333 CD8T L1
ENSG00000116641 DOCK7 472145 sc-eQTL 3.95e-01 0.0707 0.0829 0.333 CD8T L1
ENSG00000125703 ATG4C 376399 sc-eQTL 6.45e-02 -0.145 0.0782 0.333 CD8T L1
ENSG00000142856 ITGB3BP -433190 sc-eQTL 4.60e-01 0.0652 0.0881 0.333 CD8T L1
ENSG00000162607 USP1 724234 sc-eQTL 9.81e-01 -0.00165 0.0687 0.333 CD8T L1
ENSG00000203965 EFCAB7 -362841 sc-eQTL 5.88e-01 -0.0477 0.0878 0.333 CD8T L1
ENSG00000079739 PGM1 -432880 sc-eQTL 5.93e-02 -0.156 0.0823 0.333 DC L1
ENSG00000088035 ALG6 -207044 sc-eQTL 4.07e-01 0.0712 0.0856 0.333 DC L1
ENSG00000116641 DOCK7 472145 sc-eQTL 3.41e-01 0.0838 0.0877 0.333 DC L1
ENSG00000125703 ATG4C 376399 sc-eQTL 1.32e-01 -0.103 0.0684 0.333 DC L1
ENSG00000142856 ITGB3BP -433190 sc-eQTL 8.44e-01 0.019 0.0961 0.333 DC L1
ENSG00000162607 USP1 724234 sc-eQTL 1.76e-01 -0.114 0.0835 0.333 DC L1
ENSG00000203965 EFCAB7 -362841 sc-eQTL 2.35e-01 -0.0993 0.0834 0.333 DC L1
ENSG00000079739 PGM1 -432880 sc-eQTL 3.25e-01 -0.0796 0.0807 0.333 Mono L1
ENSG00000088035 ALG6 -207044 sc-eQTL 5.02e-01 -0.0567 0.0843 0.333 Mono L1
ENSG00000116641 DOCK7 472145 sc-eQTL 1.16e-01 -0.128 0.0812 0.333 Mono L1
ENSG00000125703 ATG4C 376399 sc-eQTL 8.08e-01 -0.0134 0.0552 0.333 Mono L1
ENSG00000142856 ITGB3BP -433190 sc-eQTL 2.41e-01 0.102 0.0869 0.333 Mono L1
ENSG00000162607 USP1 724234 sc-eQTL 3.49e-01 0.0671 0.0715 0.333 Mono L1
ENSG00000240563 L1TD1 965682 sc-eQTL 3.64e-01 -0.0607 0.0667 0.333 Mono L1
ENSG00000079739 PGM1 -432880 sc-eQTL 6.99e-01 -0.0271 0.0698 0.33 NK L1
ENSG00000088035 ALG6 -207044 sc-eQTL 2.43e-01 -0.0956 0.0816 0.33 NK L1
ENSG00000116641 DOCK7 472145 sc-eQTL 6.50e-01 -0.0306 0.0674 0.33 NK L1
ENSG00000125703 ATG4C 376399 sc-eQTL 7.39e-01 0.0242 0.0724 0.33 NK L1
ENSG00000142856 ITGB3BP -433190 sc-eQTL 2.42e-01 0.105 0.0897 0.33 NK L1
ENSG00000162607 USP1 724234 sc-eQTL 6.38e-01 0.0379 0.0804 0.33 NK L1
ENSG00000203965 EFCAB7 -362841 sc-eQTL 6.31e-02 -0.181 0.097 0.33 NK L1
ENSG00000079739 PGM1 -432880 sc-eQTL 6.65e-01 0.0341 0.0787 0.333 Other_T L1
ENSG00000088035 ALG6 -207044 sc-eQTL 9.79e-01 -0.00212 0.0792 0.333 Other_T L1
ENSG00000116641 DOCK7 472145 sc-eQTL 5.84e-01 0.0443 0.0808 0.333 Other_T L1
ENSG00000125703 ATG4C 376399 sc-eQTL 1.47e-01 0.101 0.0696 0.333 Other_T L1
ENSG00000142856 ITGB3BP -433190 sc-eQTL 6.89e-01 -0.0249 0.062 0.333 Other_T L1
ENSG00000162607 USP1 724234 sc-eQTL 4.30e-01 -0.0425 0.0537 0.333 Other_T L1
ENSG00000203965 EFCAB7 -362841 sc-eQTL 6.87e-03 0.257 0.0941 0.333 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -432880 sc-eQTL 5.86e-01 -0.0583 0.107 0.327 B_Activated L2
ENSG00000088035 ALG6 -207044 sc-eQTL 5.01e-01 0.0691 0.102 0.327 B_Activated L2
ENSG00000116641 DOCK7 472145 sc-eQTL 1.05e-01 -0.155 0.0948 0.327 B_Activated L2
ENSG00000125703 ATG4C 376399 sc-eQTL 8.81e-01 0.015 0.1 0.327 B_Activated L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 1.48e-01 -0.142 0.0976 0.327 B_Activated L2
ENSG00000162607 USP1 724234 sc-eQTL 7.29e-01 0.0368 0.106 0.327 B_Activated L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 1.99e-01 -0.119 0.0925 0.327 B_Activated L2
ENSG00000079739 PGM1 -432880 sc-eQTL 4.21e-01 0.077 0.0955 0.33 B_Intermediate L2
ENSG00000088035 ALG6 -207044 sc-eQTL 5.52e-01 -0.0579 0.0971 0.33 B_Intermediate L2
ENSG00000116641 DOCK7 472145 sc-eQTL 5.94e-01 0.0495 0.0927 0.33 B_Intermediate L2
ENSG00000125703 ATG4C 376399 sc-eQTL 9.59e-01 0.00405 0.0785 0.33 B_Intermediate L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 4.19e-01 0.0756 0.0934 0.33 B_Intermediate L2
ENSG00000162607 USP1 724234 sc-eQTL 3.19e-01 -0.093 0.0932 0.33 B_Intermediate L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 3.65e-01 0.084 0.0925 0.33 B_Intermediate L2
ENSG00000079739 PGM1 -432880 sc-eQTL 6.34e-01 0.0451 0.0947 0.336 B_Memory L2
ENSG00000088035 ALG6 -207044 sc-eQTL 2.17e-01 0.119 0.096 0.336 B_Memory L2
ENSG00000116641 DOCK7 472145 sc-eQTL 7.78e-01 -0.0255 0.0903 0.336 B_Memory L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.06e-01 0.0572 0.0858 0.336 B_Memory L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 3.44e-01 -0.093 0.0981 0.336 B_Memory L2
ENSG00000162607 USP1 724234 sc-eQTL 5.29e-01 -0.0625 0.099 0.336 B_Memory L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 7.99e-01 0.0248 0.0975 0.336 B_Memory L2
ENSG00000079739 PGM1 -432880 sc-eQTL 8.03e-01 0.0234 0.0936 0.333 B_Naive1 L2
ENSG00000088035 ALG6 -207044 sc-eQTL 2.81e-01 -0.101 0.0938 0.333 B_Naive1 L2
ENSG00000116641 DOCK7 472145 sc-eQTL 1.46e-01 -0.131 0.0896 0.333 B_Naive1 L2
ENSG00000125703 ATG4C 376399 sc-eQTL 1.52e-01 0.0994 0.0691 0.333 B_Naive1 L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 9.87e-01 -0.00156 0.0921 0.333 B_Naive1 L2
ENSG00000162607 USP1 724234 sc-eQTL 8.44e-01 -0.0159 0.0809 0.333 B_Naive1 L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 1.17e-01 0.154 0.0976 0.333 B_Naive1 L2
ENSG00000079739 PGM1 -432880 sc-eQTL 2.83e-01 0.1 0.0935 0.335 B_Naive2 L2
ENSG00000088035 ALG6 -207044 sc-eQTL 8.96e-01 -0.0128 0.0977 0.335 B_Naive2 L2
ENSG00000116641 DOCK7 472145 sc-eQTL 1.30e-01 -0.142 0.0934 0.335 B_Naive2 L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.36e-01 0.056 0.0904 0.335 B_Naive2 L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 2.24e-01 0.119 0.0977 0.335 B_Naive2 L2
ENSG00000162607 USP1 724234 sc-eQTL 3.69e-02 0.194 0.0924 0.335 B_Naive2 L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 8.44e-01 -0.0193 0.0976 0.335 B_Naive2 L2
ENSG00000079739 PGM1 -432880 sc-eQTL 1.23e-01 0.147 0.0949 0.334 CD4_CTL L2
ENSG00000088035 ALG6 -207044 sc-eQTL 1.06e-01 0.163 0.1 0.334 CD4_CTL L2
ENSG00000116641 DOCK7 472145 sc-eQTL 1.66e-01 0.122 0.0878 0.334 CD4_CTL L2
ENSG00000125703 ATG4C 376399 sc-eQTL 7.75e-01 -0.0261 0.0913 0.334 CD4_CTL L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 1.82e-01 0.13 0.0972 0.334 CD4_CTL L2
ENSG00000162607 USP1 724234 sc-eQTL 6.79e-01 0.0385 0.0929 0.334 CD4_CTL L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 9.74e-01 -0.00302 0.0928 0.334 CD4_CTL L2
ENSG00000079739 PGM1 -432880 sc-eQTL 6.50e-01 0.0343 0.0757 0.333 CD4_Naive L2
ENSG00000088035 ALG6 -207044 sc-eQTL 4.65e-01 -0.0601 0.0821 0.333 CD4_Naive L2
ENSG00000116641 DOCK7 472145 sc-eQTL 4.14e-03 -0.23 0.0792 0.333 CD4_Naive L2
ENSG00000125703 ATG4C 376399 sc-eQTL 4.46e-01 0.0544 0.0713 0.333 CD4_Naive L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 1.68e-01 0.12 0.0869 0.333 CD4_Naive L2
ENSG00000162607 USP1 724234 sc-eQTL 9.11e-01 0.00743 0.0667 0.333 CD4_Naive L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 1.33e-01 0.13 0.0862 0.333 CD4_Naive L2
ENSG00000079739 PGM1 -432880 sc-eQTL 1.18e-02 0.195 0.0769 0.333 CD4_TCM L2
ENSG00000088035 ALG6 -207044 sc-eQTL 4.91e-01 0.0624 0.0905 0.333 CD4_TCM L2
ENSG00000116641 DOCK7 472145 sc-eQTL 3.57e-01 -0.074 0.0801 0.333 CD4_TCM L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.12e-01 -0.0513 0.0781 0.333 CD4_TCM L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 4.99e-02 0.18 0.0913 0.333 CD4_TCM L2
ENSG00000162607 USP1 724234 sc-eQTL 2.65e-01 -0.0842 0.0753 0.333 CD4_TCM L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 1.95e-01 -0.115 0.0888 0.333 CD4_TCM L2
ENSG00000079739 PGM1 -432880 sc-eQTL 5.58e-01 0.0545 0.0929 0.333 CD4_TEM L2
ENSG00000088035 ALG6 -207044 sc-eQTL 1.50e-01 0.134 0.093 0.333 CD4_TEM L2
ENSG00000116641 DOCK7 472145 sc-eQTL 8.58e-01 0.0164 0.0911 0.333 CD4_TEM L2
ENSG00000125703 ATG4C 376399 sc-eQTL 3.58e-01 0.0814 0.0883 0.333 CD4_TEM L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 2.87e-01 -0.0973 0.0911 0.333 CD4_TEM L2
ENSG00000162607 USP1 724234 sc-eQTL 9.12e-01 0.0096 0.0865 0.333 CD4_TEM L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 3.43e-01 0.0897 0.0945 0.333 CD4_TEM L2
ENSG00000079739 PGM1 -432880 sc-eQTL 7.35e-01 -0.0283 0.0835 0.333 CD8_CTL L2
ENSG00000088035 ALG6 -207044 sc-eQTL 6.62e-01 -0.0389 0.0888 0.333 CD8_CTL L2
ENSG00000116641 DOCK7 472145 sc-eQTL 4.82e-01 0.0594 0.0842 0.333 CD8_CTL L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.23e-02 -0.174 0.089 0.333 CD8_CTL L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 5.12e-01 0.0612 0.0932 0.333 CD8_CTL L2
ENSG00000162607 USP1 724234 sc-eQTL 6.21e-01 -0.0414 0.0835 0.333 CD8_CTL L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 3.27e-01 0.0937 0.0954 0.333 CD8_CTL L2
ENSG00000079739 PGM1 -432880 sc-eQTL 9.46e-01 0.00583 0.0863 0.333 CD8_Naive L2
ENSG00000088035 ALG6 -207044 sc-eQTL 7.60e-01 -0.0274 0.0893 0.333 CD8_Naive L2
ENSG00000116641 DOCK7 472145 sc-eQTL 9.71e-01 0.00341 0.0924 0.333 CD8_Naive L2
ENSG00000125703 ATG4C 376399 sc-eQTL 2.21e-01 -0.108 0.0884 0.333 CD8_Naive L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 2.78e-01 0.0973 0.0896 0.333 CD8_Naive L2
ENSG00000162607 USP1 724234 sc-eQTL 8.39e-01 0.0155 0.0759 0.333 CD8_Naive L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 3.30e-01 -0.0825 0.0845 0.333 CD8_Naive L2
ENSG00000079739 PGM1 -432880 sc-eQTL 7.66e-01 0.0294 0.0984 0.326 CD8_TCM L2
ENSG00000088035 ALG6 -207044 sc-eQTL 1.40e-01 0.147 0.0991 0.326 CD8_TCM L2
ENSG00000116641 DOCK7 472145 sc-eQTL 5.80e-01 0.0539 0.0972 0.326 CD8_TCM L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.28e-01 0.0628 0.0994 0.326 CD8_TCM L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 8.92e-01 -0.0131 0.0966 0.326 CD8_TCM L2
ENSG00000162607 USP1 724234 sc-eQTL 6.12e-01 0.0472 0.0929 0.326 CD8_TCM L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 2.40e-01 0.116 0.0981 0.326 CD8_TCM L2
ENSG00000079739 PGM1 -432880 sc-eQTL 5.97e-01 0.0504 0.0952 0.331 CD8_TEM L2
ENSG00000088035 ALG6 -207044 sc-eQTL 5.23e-01 0.0611 0.0955 0.331 CD8_TEM L2
ENSG00000116641 DOCK7 472145 sc-eQTL 9.31e-01 -0.00805 0.0927 0.331 CD8_TEM L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.16e-01 0.058 0.089 0.331 CD8_TEM L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 9.09e-01 0.0111 0.0964 0.331 CD8_TEM L2
ENSG00000162607 USP1 724234 sc-eQTL 5.71e-01 -0.0521 0.0919 0.331 CD8_TEM L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 9.38e-01 0.00732 0.0935 0.331 CD8_TEM L2
ENSG00000079739 PGM1 -432880 sc-eQTL 5.08e-01 -0.0604 0.091 0.329 MAIT L2
ENSG00000088035 ALG6 -207044 sc-eQTL 4.11e-01 0.0741 0.09 0.329 MAIT L2
ENSG00000116641 DOCK7 472145 sc-eQTL 9.61e-01 0.00421 0.0864 0.329 MAIT L2
ENSG00000125703 ATG4C 376399 sc-eQTL 2.99e-02 0.197 0.0901 0.329 MAIT L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 3.03e-01 -0.0941 0.091 0.329 MAIT L2
ENSG00000162607 USP1 724234 sc-eQTL 3.93e-01 0.0773 0.0904 0.329 MAIT L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 9.98e-02 0.154 0.0934 0.329 MAIT L2
ENSG00000079739 PGM1 -432880 sc-eQTL 5.43e-01 -0.0562 0.0924 0.333 NK_CD56bright L2
ENSG00000088035 ALG6 -207044 sc-eQTL 3.87e-01 -0.0821 0.0946 0.333 NK_CD56bright L2
ENSG00000116641 DOCK7 472145 sc-eQTL 7.37e-01 0.0276 0.0821 0.333 NK_CD56bright L2
ENSG00000125703 ATG4C 376399 sc-eQTL 4.90e-02 -0.18 0.0909 0.333 NK_CD56bright L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 7.78e-01 -0.027 0.0955 0.333 NK_CD56bright L2
ENSG00000162607 USP1 724234 sc-eQTL 6.58e-01 0.0437 0.0985 0.333 NK_CD56bright L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 3.22e-01 -0.0935 0.094 0.333 NK_CD56bright L2
ENSG00000079739 PGM1 -432880 sc-eQTL 1.00e+00 -2.58e-05 0.0726 0.332 NK_CD56dim L2
ENSG00000088035 ALG6 -207044 sc-eQTL 7.44e-02 -0.164 0.0914 0.332 NK_CD56dim L2
ENSG00000116641 DOCK7 472145 sc-eQTL 1.57e-01 -0.113 0.0798 0.332 NK_CD56dim L2
ENSG00000125703 ATG4C 376399 sc-eQTL 1.69e-01 0.112 0.0811 0.332 NK_CD56dim L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 8.31e-01 0.0198 0.0927 0.332 NK_CD56dim L2
ENSG00000162607 USP1 724234 sc-eQTL 7.51e-01 -0.0286 0.0898 0.332 NK_CD56dim L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 1.58e-02 -0.24 0.0987 0.332 NK_CD56dim L2
ENSG00000079739 PGM1 -432880 sc-eQTL 4.71e-01 -0.0707 0.098 0.34 NK_HLA L2
ENSG00000088035 ALG6 -207044 sc-eQTL 2.78e-01 0.11 0.101 0.34 NK_HLA L2
ENSG00000116641 DOCK7 472145 sc-eQTL 4.58e-01 0.0577 0.0777 0.34 NK_HLA L2
ENSG00000125703 ATG4C 376399 sc-eQTL 8.69e-01 -0.0149 0.0905 0.34 NK_HLA L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 3.07e-01 0.097 0.0948 0.34 NK_HLA L2
ENSG00000162607 USP1 724234 sc-eQTL 6.54e-01 0.0447 0.0994 0.34 NK_HLA L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 9.38e-01 -0.00703 0.0905 0.34 NK_HLA L2
ENSG00000079739 PGM1 -432880 sc-eQTL 1.38e-01 0.118 0.079 0.332 NK_cytokine L2
ENSG00000088035 ALG6 -207044 sc-eQTL 6.79e-01 -0.0372 0.0897 0.332 NK_cytokine L2
ENSG00000116641 DOCK7 472145 sc-eQTL 4.90e-01 -0.0574 0.0831 0.332 NK_cytokine L2
ENSG00000125703 ATG4C 376399 sc-eQTL 8.25e-01 0.0188 0.0851 0.332 NK_cytokine L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 6.21e-02 0.164 0.0874 0.332 NK_cytokine L2
ENSG00000162607 USP1 724234 sc-eQTL 3.26e-01 0.0911 0.0924 0.332 NK_cytokine L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 2.19e-01 -0.115 0.0935 0.332 NK_cytokine L2
ENSG00000079739 PGM1 -432880 sc-eQTL 5.44e-01 -0.0655 0.108 0.33 PB L2
ENSG00000088035 ALG6 -207044 sc-eQTL 8.15e-02 0.197 0.112 0.33 PB L2
ENSG00000116641 DOCK7 472145 sc-eQTL 5.50e-01 0.0726 0.121 0.33 PB L2
ENSG00000125703 ATG4C 376399 sc-eQTL 1.52e-01 0.151 0.105 0.33 PB L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 3.83e-01 0.092 0.105 0.33 PB L2
ENSG00000162607 USP1 724234 sc-eQTL 6.25e-01 -0.0514 0.105 0.33 PB L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 5.95e-01 0.0617 0.116 0.33 PB L2
ENSG00000079739 PGM1 -432880 sc-eQTL 6.42e-02 0.156 0.0841 0.33 Pro_T L2
ENSG00000088035 ALG6 -207044 sc-eQTL 1.25e-01 0.132 0.0857 0.33 Pro_T L2
ENSG00000116641 DOCK7 472145 sc-eQTL 3.52e-01 -0.0805 0.0864 0.33 Pro_T L2
ENSG00000125703 ATG4C 376399 sc-eQTL 1.62e-01 0.106 0.0754 0.33 Pro_T L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 6.86e-01 0.0307 0.076 0.33 Pro_T L2
ENSG00000162607 USP1 724234 sc-eQTL 2.53e-01 -0.0598 0.0521 0.33 Pro_T L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 1.68e-01 0.122 0.0879 0.33 Pro_T L2
ENSG00000079739 PGM1 -432880 sc-eQTL 4.89e-01 0.0626 0.0904 0.333 Treg L2
ENSG00000088035 ALG6 -207044 sc-eQTL 7.44e-01 -0.0317 0.0967 0.333 Treg L2
ENSG00000116641 DOCK7 472145 sc-eQTL 5.59e-01 -0.052 0.0887 0.333 Treg L2
ENSG00000125703 ATG4C 376399 sc-eQTL 2.04e-01 0.115 0.0904 0.333 Treg L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 8.59e-02 0.163 0.0943 0.333 Treg L2
ENSG00000162607 USP1 724234 sc-eQTL 1.86e-02 -0.215 0.0906 0.333 Treg L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 8.78e-01 0.014 0.0908 0.333 Treg L2
ENSG00000079739 PGM1 -432880 sc-eQTL 3.70e-01 -0.0849 0.0944 0.334 cDC L2
ENSG00000088035 ALG6 -207044 sc-eQTL 9.43e-01 -0.00689 0.0959 0.334 cDC L2
ENSG00000116641 DOCK7 472145 sc-eQTL 9.10e-01 -0.0106 0.0941 0.334 cDC L2
ENSG00000125703 ATG4C 376399 sc-eQTL 1.95e-01 -0.106 0.0814 0.334 cDC L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 1.09e-01 0.166 0.103 0.334 cDC L2
ENSG00000162607 USP1 724234 sc-eQTL 1.60e-01 -0.129 0.0917 0.334 cDC L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 9.03e-01 0.0102 0.0832 0.334 cDC L2
ENSG00000079739 PGM1 -432880 sc-eQTL 1.52e-01 -0.121 0.0843 0.333 cMono_IL1B L2
ENSG00000088035 ALG6 -207044 sc-eQTL 3.37e-01 -0.0813 0.0846 0.333 cMono_IL1B L2
ENSG00000116641 DOCK7 472145 sc-eQTL 4.46e-01 -0.0682 0.0892 0.333 cMono_IL1B L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.01e-01 -0.0423 0.0628 0.333 cMono_IL1B L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 1.32e-01 0.134 0.0885 0.333 cMono_IL1B L2
ENSG00000162607 USP1 724234 sc-eQTL 7.28e-01 0.0273 0.0785 0.333 cMono_IL1B L2
ENSG00000240563 L1TD1 965682 sc-eQTL 3.50e-01 -0.0737 0.0787 0.333 cMono_IL1B L2
ENSG00000079739 PGM1 -432880 sc-eQTL 6.86e-01 -0.0384 0.0947 0.333 cMono_S100A L2
ENSG00000088035 ALG6 -207044 sc-eQTL 9.34e-01 0.00799 0.0961 0.333 cMono_S100A L2
ENSG00000116641 DOCK7 472145 sc-eQTL 1.27e-01 -0.136 0.0886 0.333 cMono_S100A L2
ENSG00000125703 ATG4C 376399 sc-eQTL 3.46e-01 0.0727 0.0769 0.333 cMono_S100A L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 1.88e-01 0.114 0.0866 0.333 cMono_S100A L2
ENSG00000162607 USP1 724234 sc-eQTL 9.62e-01 0.00423 0.0895 0.333 cMono_S100A L2
ENSG00000240563 L1TD1 965682 sc-eQTL 3.15e-01 -0.0749 0.0743 0.333 cMono_S100A L2
ENSG00000079739 PGM1 -432880 sc-eQTL 8.66e-02 -0.184 0.107 0.333 gdT L2
ENSG00000088035 ALG6 -207044 sc-eQTL 3.86e-01 -0.0998 0.115 0.333 gdT L2
ENSG00000116641 DOCK7 472145 sc-eQTL 6.13e-01 0.0572 0.113 0.333 gdT L2
ENSG00000125703 ATG4C 376399 sc-eQTL 1.45e-01 0.157 0.107 0.333 gdT L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 3.87e-01 0.0991 0.114 0.333 gdT L2
ENSG00000162607 USP1 724234 sc-eQTL 2.85e-01 -0.116 0.108 0.333 gdT L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 1.53e-01 -0.161 0.112 0.333 gdT L2
ENSG00000079739 PGM1 -432880 sc-eQTL 3.26e-01 -0.0942 0.0957 0.324 intMono L2
ENSG00000088035 ALG6 -207044 sc-eQTL 4.11e-01 -0.0735 0.0892 0.324 intMono L2
ENSG00000116641 DOCK7 472145 sc-eQTL 7.38e-01 -0.0306 0.0912 0.324 intMono L2
ENSG00000125703 ATG4C 376399 sc-eQTL 5.42e-01 0.0532 0.087 0.324 intMono L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 2.95e-01 -0.1 0.0957 0.324 intMono L2
ENSG00000162607 USP1 724234 sc-eQTL 7.90e-01 -0.0261 0.0976 0.324 intMono L2
ENSG00000240563 L1TD1 965682 sc-eQTL 6.34e-01 0.0342 0.0717 0.324 intMono L2
ENSG00000079739 PGM1 -432880 sc-eQTL 1.87e-02 0.199 0.0839 0.333 ncMono L2
ENSG00000088035 ALG6 -207044 sc-eQTL 5.27e-01 0.0592 0.0934 0.333 ncMono L2
ENSG00000116641 DOCK7 472145 sc-eQTL 9.04e-01 0.0111 0.092 0.333 ncMono L2
ENSG00000125703 ATG4C 376399 sc-eQTL 4.41e-01 -0.0662 0.0858 0.333 ncMono L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 5.07e-01 -0.0598 0.0898 0.333 ncMono L2
ENSG00000162607 USP1 724234 sc-eQTL 5.88e-01 0.0498 0.0918 0.333 ncMono L2
ENSG00000240563 L1TD1 965682 sc-eQTL 4.29e-01 -0.0516 0.0651 0.333 ncMono L2
ENSG00000079739 PGM1 -432880 sc-eQTL 3.58e-01 -0.0938 0.102 0.333 pDC L2
ENSG00000088035 ALG6 -207044 sc-eQTL 9.91e-01 0.00117 0.0993 0.333 pDC L2
ENSG00000116641 DOCK7 472145 sc-eQTL 1.79e-01 0.136 0.101 0.333 pDC L2
ENSG00000125703 ATG4C 376399 sc-eQTL 7.12e-01 -0.0336 0.0909 0.333 pDC L2
ENSG00000142856 ITGB3BP -433190 sc-eQTL 8.67e-01 -0.0172 0.102 0.333 pDC L2
ENSG00000162607 USP1 724234 sc-eQTL 5.16e-01 0.0677 0.104 0.333 pDC L2
ENSG00000203965 EFCAB7 -362841 sc-eQTL 2.66e-01 -0.101 0.09 0.333 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -432880 sc-eQTL 8.21e-01 0.02 0.0884 0.333 B_Memory LOneK1K
ENSG00000088035 ALG6 -207044 sc-eQTL 9.13e-01 0.0107 0.0977 0.333 B_Memory LOneK1K
ENSG00000116641 DOCK7 472145 sc-eQTL 7.00e-01 -0.0327 0.0848 0.333 B_Memory LOneK1K
ENSG00000125703 ATG4C 376399 sc-eQTL 6.75e-01 0.0288 0.0685 0.333 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -433190 sc-eQTL 9.93e-01 0.00079 0.0901 0.333 B_Memory LOneK1K
ENSG00000162607 USP1 724234 sc-eQTL 5.79e-01 -0.0486 0.0874 0.333 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -362841 sc-eQTL 5.10e-01 0.062 0.0938 0.333 B_Memory LOneK1K
ENSG00000079739 PGM1 -432880 sc-eQTL 4.74e-01 0.0656 0.0915 0.333 B_Naive LOneK1K
ENSG00000088035 ALG6 -207044 sc-eQTL 4.19e-01 -0.0761 0.0941 0.333 B_Naive LOneK1K
ENSG00000116641 DOCK7 472145 sc-eQTL 7.67e-02 -0.155 0.0874 0.333 B_Naive LOneK1K
ENSG00000125703 ATG4C 376399 sc-eQTL 1.83e-01 0.0895 0.0669 0.333 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -433190 sc-eQTL 7.89e-01 0.0254 0.095 0.333 B_Naive LOneK1K
ENSG00000162607 USP1 724234 sc-eQTL 2.23e-01 0.0993 0.0813 0.333 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -362841 sc-eQTL 5.34e-01 0.0594 0.0954 0.333 B_Naive LOneK1K
ENSG00000079739 PGM1 -432880 sc-eQTL 3.77e-01 -0.0766 0.0865 0.333 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -207044 sc-eQTL 3.33e-01 -0.0812 0.0837 0.333 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 472145 sc-eQTL 1.86e-01 -0.112 0.0841 0.333 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 376399 sc-eQTL 8.60e-01 -0.0103 0.0584 0.333 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -433190 sc-eQTL 8.67e-02 0.148 0.0858 0.333 CD14_Mono LOneK1K
ENSG00000162607 USP1 724234 sc-eQTL 6.52e-01 0.0334 0.0737 0.333 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 965682 sc-eQTL 2.77e-01 -0.0869 0.0798 0.333 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -432880 sc-eQTL 5.21e-01 0.0528 0.0821 0.332 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -207044 sc-eQTL 7.65e-01 -0.0279 0.0933 0.332 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 472145 sc-eQTL 5.54e-01 -0.0547 0.0923 0.332 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 376399 sc-eQTL 8.08e-01 -0.0191 0.0787 0.332 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -433190 sc-eQTL 4.85e-01 -0.0639 0.0913 0.332 CD16_Mono LOneK1K
ENSG00000162607 USP1 724234 sc-eQTL 2.84e-01 0.0921 0.0857 0.332 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 965682 sc-eQTL 4.12e-01 -0.0481 0.0585 0.332 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -432880 sc-eQTL 7.82e-01 -0.0196 0.0709 0.332 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -207044 sc-eQTL 2.70e-01 -0.094 0.085 0.332 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 472145 sc-eQTL 1.89e-01 -0.1 0.076 0.332 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 376399 sc-eQTL 3.73e-01 0.0678 0.0761 0.332 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -433190 sc-eQTL 2.68e-01 0.1 0.09 0.332 NK_CD56dim LOneK1K
ENSG00000162607 USP1 724234 sc-eQTL 5.84e-01 0.0449 0.0819 0.332 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -362841 sc-eQTL 5.00e-02 -0.195 0.0988 0.332 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116652 DLEU2L -386551 eQTL 0.0141 0.0678 0.0276 0.00219 0.0 0.316
ENSG00000240563 L1TD1 965682 eQTL 0.0418 0.0836 0.041 0.0 0.0 0.316

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina