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Genes within 1Mb (chr1:63084829:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -508582 sc-eQTL 2.16e-01 0.0955 0.077 0.451 B L1
ENSG00000088035 ALG6 -282746 sc-eQTL 3.92e-01 0.0686 0.0799 0.451 B L1
ENSG00000116641 DOCK7 396443 sc-eQTL 1.63e-01 0.112 0.0797 0.451 B L1
ENSG00000125703 ATG4C 300697 sc-eQTL 3.62e-01 0.0508 0.0555 0.451 B L1
ENSG00000142856 ITGB3BP -508892 sc-eQTL 2.68e-01 0.0982 0.0883 0.451 B L1
ENSG00000162607 USP1 648532 sc-eQTL 4.30e-01 0.0607 0.0768 0.451 B L1
ENSG00000203965 EFCAB7 -438543 sc-eQTL 2.40e-01 0.106 0.0904 0.451 B L1
ENSG00000079739 PGM1 -508582 sc-eQTL 1.42e-01 0.0976 0.0662 0.451 CD4T L1
ENSG00000088035 ALG6 -282746 sc-eQTL 2.68e-01 0.0814 0.0732 0.451 CD4T L1
ENSG00000116641 DOCK7 396443 sc-eQTL 3.64e-01 -0.0674 0.0742 0.451 CD4T L1
ENSG00000125703 ATG4C 300697 sc-eQTL 3.25e-01 -0.0591 0.0599 0.451 CD4T L1
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.67e-01 0.118 0.0848 0.451 CD4T L1
ENSG00000162607 USP1 648532 sc-eQTL 4.45e-01 0.0445 0.0582 0.451 CD4T L1
ENSG00000203965 EFCAB7 -438543 sc-eQTL 4.61e-01 0.0564 0.0764 0.451 CD4T L1
ENSG00000079739 PGM1 -508582 sc-eQTL 9.43e-01 0.00525 0.0737 0.451 CD8T L1
ENSG00000088035 ALG6 -282746 sc-eQTL 7.63e-01 0.0246 0.0812 0.451 CD8T L1
ENSG00000116641 DOCK7 396443 sc-eQTL 5.88e-02 0.155 0.0816 0.451 CD8T L1
ENSG00000125703 ATG4C 300697 sc-eQTL 5.56e-02 -0.149 0.0775 0.451 CD8T L1
ENSG00000142856 ITGB3BP -508892 sc-eQTL 3.81e-01 0.0767 0.0873 0.451 CD8T L1
ENSG00000162607 USP1 648532 sc-eQTL 1.49e-01 0.0983 0.0678 0.451 CD8T L1
ENSG00000203965 EFCAB7 -438543 sc-eQTL 1.54e-01 0.124 0.0868 0.451 CD8T L1
ENSG00000079739 PGM1 -508582 sc-eQTL 8.93e-01 -0.0111 0.0823 0.441 DC L1
ENSG00000088035 ALG6 -282746 sc-eQTL 7.38e-01 0.0284 0.0849 0.441 DC L1
ENSG00000116641 DOCK7 396443 sc-eQTL 7.79e-01 0.0244 0.0871 0.441 DC L1
ENSG00000125703 ATG4C 300697 sc-eQTL 2.03e-01 -0.0867 0.0679 0.441 DC L1
ENSG00000142856 ITGB3BP -508892 sc-eQTL 4.29e-01 0.0754 0.0951 0.441 DC L1
ENSG00000162607 USP1 648532 sc-eQTL 3.65e-01 -0.0753 0.083 0.441 DC L1
ENSG00000203965 EFCAB7 -438543 sc-eQTL 6.99e-01 0.032 0.0829 0.441 DC L1
ENSG00000079739 PGM1 -508582 sc-eQTL 2.96e-01 -0.0836 0.0798 0.451 Mono L1
ENSG00000088035 ALG6 -282746 sc-eQTL 2.86e-01 -0.089 0.0833 0.451 Mono L1
ENSG00000116641 DOCK7 396443 sc-eQTL 4.19e-01 -0.0653 0.0806 0.451 Mono L1
ENSG00000125703 ATG4C 300697 sc-eQTL 8.94e-01 0.00725 0.0546 0.451 Mono L1
ENSG00000142856 ITGB3BP -508892 sc-eQTL 2.26e-02 0.196 0.0852 0.451 Mono L1
ENSG00000162607 USP1 648532 sc-eQTL 4.38e-01 -0.0549 0.0707 0.451 Mono L1
ENSG00000240563 L1TD1 889980 sc-eQTL 1.20e-01 -0.103 0.0657 0.451 Mono L1
ENSG00000079739 PGM1 -508582 sc-eQTL 4.76e-01 -0.0487 0.0681 0.453 NK L1
ENSG00000088035 ALG6 -282746 sc-eQTL 9.39e-01 0.00608 0.0799 0.453 NK L1
ENSG00000116641 DOCK7 396443 sc-eQTL 4.48e-01 0.05 0.0657 0.453 NK L1
ENSG00000125703 ATG4C 300697 sc-eQTL 2.33e-01 0.0844 0.0705 0.453 NK L1
ENSG00000142856 ITGB3BP -508892 sc-eQTL 4.72e-01 0.0633 0.0878 0.453 NK L1
ENSG00000162607 USP1 648532 sc-eQTL 9.93e-01 -0.000656 0.0785 0.453 NK L1
ENSG00000203965 EFCAB7 -438543 sc-eQTL 9.29e-01 0.00852 0.0954 0.453 NK L1
ENSG00000079739 PGM1 -508582 sc-eQTL 4.07e-01 -0.064 0.077 0.451 Other_T L1
ENSG00000088035 ALG6 -282746 sc-eQTL 3.29e-01 0.0756 0.0773 0.451 Other_T L1
ENSG00000116641 DOCK7 396443 sc-eQTL 8.95e-01 0.0105 0.0791 0.451 Other_T L1
ENSG00000125703 ATG4C 300697 sc-eQTL 9.57e-01 -0.00372 0.0685 0.451 Other_T L1
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.15e-02 0.152 0.0598 0.451 Other_T L1
ENSG00000162607 USP1 648532 sc-eQTL 4.72e-02 -0.104 0.0521 0.451 Other_T L1
ENSG00000203965 EFCAB7 -438543 sc-eQTL 4.33e-01 0.0735 0.0936 0.451 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -508582 sc-eQTL 9.99e-01 0.000158 0.106 0.434 B_Activated L2
ENSG00000088035 ALG6 -282746 sc-eQTL 3.30e-02 0.215 0.1 0.434 B_Activated L2
ENSG00000116641 DOCK7 396443 sc-eQTL 2.66e-01 0.105 0.0942 0.434 B_Activated L2
ENSG00000125703 ATG4C 300697 sc-eQTL 8.64e-02 -0.17 0.0986 0.434 B_Activated L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 7.03e-01 0.0372 0.0971 0.434 B_Activated L2
ENSG00000162607 USP1 648532 sc-eQTL 7.12e-01 0.039 0.105 0.434 B_Activated L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 7.22e-01 -0.0327 0.092 0.434 B_Activated L2
ENSG00000079739 PGM1 -508582 sc-eQTL 3.60e-01 0.0851 0.0928 0.451 B_Intermediate L2
ENSG00000088035 ALG6 -282746 sc-eQTL 3.26e-01 0.0927 0.0942 0.451 B_Intermediate L2
ENSG00000116641 DOCK7 396443 sc-eQTL 9.94e-01 -0.000733 0.0902 0.451 B_Intermediate L2
ENSG00000125703 ATG4C 300697 sc-eQTL 5.27e-01 0.0483 0.0763 0.451 B_Intermediate L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.28e-01 0.138 0.0904 0.451 B_Intermediate L2
ENSG00000162607 USP1 648532 sc-eQTL 6.93e-01 0.0358 0.0908 0.451 B_Intermediate L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 9.64e-01 -0.00409 0.0901 0.451 B_Intermediate L2
ENSG00000079739 PGM1 -508582 sc-eQTL 6.45e-01 0.0423 0.0917 0.448 B_Memory L2
ENSG00000088035 ALG6 -282746 sc-eQTL 9.84e-01 0.00193 0.0933 0.448 B_Memory L2
ENSG00000116641 DOCK7 396443 sc-eQTL 3.89e-01 -0.0754 0.0873 0.448 B_Memory L2
ENSG00000125703 ATG4C 300697 sc-eQTL 1.31e-01 -0.125 0.0827 0.448 B_Memory L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 6.23e-02 0.177 0.0944 0.448 B_Memory L2
ENSG00000162607 USP1 648532 sc-eQTL 9.39e-01 0.00731 0.096 0.448 B_Memory L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 7.77e-01 -0.0268 0.0944 0.448 B_Memory L2
ENSG00000079739 PGM1 -508582 sc-eQTL 5.01e-01 0.0614 0.0911 0.451 B_Naive1 L2
ENSG00000088035 ALG6 -282746 sc-eQTL 3.98e-01 0.0774 0.0914 0.451 B_Naive1 L2
ENSG00000116641 DOCK7 396443 sc-eQTL 1.09e-01 0.14 0.0871 0.451 B_Naive1 L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.86e-01 0.0471 0.0675 0.451 B_Naive1 L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 4.65e-01 0.0654 0.0895 0.451 B_Naive1 L2
ENSG00000162607 USP1 648532 sc-eQTL 1.93e-01 0.102 0.0785 0.451 B_Naive1 L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 1.20e-02 0.239 0.0942 0.451 B_Naive1 L2
ENSG00000079739 PGM1 -508582 sc-eQTL 2.93e-01 0.095 0.0901 0.451 B_Naive2 L2
ENSG00000088035 ALG6 -282746 sc-eQTL 3.04e-01 -0.0968 0.094 0.451 B_Naive2 L2
ENSG00000116641 DOCK7 396443 sc-eQTL 4.72e-01 0.0651 0.0905 0.451 B_Naive2 L2
ENSG00000125703 ATG4C 300697 sc-eQTL 7.08e-01 0.0327 0.0872 0.451 B_Naive2 L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 6.69e-01 -0.0405 0.0945 0.451 B_Naive2 L2
ENSG00000162607 USP1 648532 sc-eQTL 6.32e-01 0.0431 0.09 0.451 B_Naive2 L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 5.30e-01 -0.0591 0.094 0.451 B_Naive2 L2
ENSG00000079739 PGM1 -508582 sc-eQTL 4.61e-01 0.0685 0.0927 0.443 CD4_CTL L2
ENSG00000088035 ALG6 -282746 sc-eQTL 2.02e-01 0.125 0.0978 0.443 CD4_CTL L2
ENSG00000116641 DOCK7 396443 sc-eQTL 8.09e-01 0.0207 0.0858 0.443 CD4_CTL L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.23e-01 0.0711 0.0887 0.443 CD4_CTL L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 6.17e-01 -0.0476 0.0949 0.443 CD4_CTL L2
ENSG00000162607 USP1 648532 sc-eQTL 5.67e-02 0.172 0.0896 0.443 CD4_CTL L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 5.96e-01 -0.0479 0.0902 0.443 CD4_CTL L2
ENSG00000079739 PGM1 -508582 sc-eQTL 2.85e-01 0.0796 0.0742 0.451 CD4_Naive L2
ENSG00000088035 ALG6 -282746 sc-eQTL 4.80e-01 0.0572 0.0808 0.451 CD4_Naive L2
ENSG00000116641 DOCK7 396443 sc-eQTL 8.94e-01 -0.0106 0.0795 0.451 CD4_Naive L2
ENSG00000125703 ATG4C 300697 sc-eQTL 5.03e-02 -0.137 0.0696 0.451 CD4_Naive L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 3.84e-01 0.0748 0.0857 0.451 CD4_Naive L2
ENSG00000162607 USP1 648532 sc-eQTL 3.07e-01 0.067 0.0654 0.451 CD4_Naive L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 8.68e-01 0.0142 0.0852 0.451 CD4_Naive L2
ENSG00000079739 PGM1 -508582 sc-eQTL 6.45e-02 0.143 0.0769 0.451 CD4_TCM L2
ENSG00000088035 ALG6 -282746 sc-eQTL 3.92e-01 0.0771 0.0899 0.451 CD4_TCM L2
ENSG00000116641 DOCK7 396443 sc-eQTL 9.35e-03 -0.206 0.0785 0.451 CD4_TCM L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.50e-01 -0.0587 0.0776 0.451 CD4_TCM L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 5.77e-01 0.0511 0.0915 0.451 CD4_TCM L2
ENSG00000162607 USP1 648532 sc-eQTL 5.28e-01 0.0474 0.075 0.451 CD4_TCM L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 3.71e-01 0.0792 0.0884 0.451 CD4_TCM L2
ENSG00000079739 PGM1 -508582 sc-eQTL 8.05e-01 -0.0227 0.0915 0.451 CD4_TEM L2
ENSG00000088035 ALG6 -282746 sc-eQTL 5.40e-01 0.0564 0.0919 0.451 CD4_TEM L2
ENSG00000116641 DOCK7 396443 sc-eQTL 5.41e-01 0.0549 0.0896 0.451 CD4_TEM L2
ENSG00000125703 ATG4C 300697 sc-eQTL 9.26e-02 0.146 0.0865 0.451 CD4_TEM L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 5.00e-01 0.0607 0.0898 0.451 CD4_TEM L2
ENSG00000162607 USP1 648532 sc-eQTL 3.29e-01 -0.0832 0.085 0.451 CD4_TEM L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 1.06e-01 0.15 0.0926 0.451 CD4_TEM L2
ENSG00000079739 PGM1 -508582 sc-eQTL 7.80e-01 -0.0234 0.0836 0.451 CD8_CTL L2
ENSG00000088035 ALG6 -282746 sc-eQTL 4.44e-01 0.0681 0.0888 0.451 CD8_CTL L2
ENSG00000116641 DOCK7 396443 sc-eQTL 1.55e-01 0.12 0.084 0.451 CD8_CTL L2
ENSG00000125703 ATG4C 300697 sc-eQTL 6.22e-01 -0.0444 0.0898 0.451 CD8_CTL L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 7.74e-02 0.165 0.0927 0.451 CD8_CTL L2
ENSG00000162607 USP1 648532 sc-eQTL 1.94e-01 0.108 0.0833 0.451 CD8_CTL L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 3.58e-01 -0.088 0.0955 0.451 CD8_CTL L2
ENSG00000079739 PGM1 -508582 sc-eQTL 3.77e-01 0.0744 0.0841 0.451 CD8_Naive L2
ENSG00000088035 ALG6 -282746 sc-eQTL 9.13e-01 0.0095 0.0872 0.451 CD8_Naive L2
ENSG00000116641 DOCK7 396443 sc-eQTL 4.52e-02 0.18 0.0893 0.451 CD8_Naive L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.18e-01 -0.0701 0.0864 0.451 CD8_Naive L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 2.61e-01 0.0984 0.0874 0.451 CD8_Naive L2
ENSG00000162607 USP1 648532 sc-eQTL 5.21e-01 0.0475 0.074 0.451 CD8_Naive L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 3.37e-01 0.0793 0.0824 0.451 CD8_Naive L2
ENSG00000079739 PGM1 -508582 sc-eQTL 1.19e-01 -0.143 0.0914 0.454 CD8_TCM L2
ENSG00000088035 ALG6 -282746 sc-eQTL 9.07e-01 0.0108 0.0932 0.454 CD8_TCM L2
ENSG00000116641 DOCK7 396443 sc-eQTL 9.88e-01 0.00138 0.0909 0.454 CD8_TCM L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.28e-02 -0.188 0.092 0.454 CD8_TCM L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 2.89e-01 -0.0957 0.0901 0.454 CD8_TCM L2
ENSG00000162607 USP1 648532 sc-eQTL 8.20e-02 0.151 0.0863 0.454 CD8_TCM L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 2.42e-01 0.108 0.0918 0.454 CD8_TCM L2
ENSG00000079739 PGM1 -508582 sc-eQTL 3.37e-01 -0.0916 0.0952 0.443 CD8_TEM L2
ENSG00000088035 ALG6 -282746 sc-eQTL 8.95e-01 0.0126 0.0958 0.443 CD8_TEM L2
ENSG00000116641 DOCK7 396443 sc-eQTL 7.32e-01 0.0318 0.0928 0.443 CD8_TEM L2
ENSG00000125703 ATG4C 300697 sc-eQTL 5.03e-01 -0.0598 0.0891 0.443 CD8_TEM L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 7.66e-01 0.0288 0.0966 0.443 CD8_TEM L2
ENSG00000162607 USP1 648532 sc-eQTL 4.58e-01 0.0685 0.092 0.443 CD8_TEM L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 2.17e-02 0.214 0.0924 0.443 CD8_TEM L2
ENSG00000079739 PGM1 -508582 sc-eQTL 5.16e-01 -0.0583 0.0896 0.444 MAIT L2
ENSG00000088035 ALG6 -282746 sc-eQTL 1.90e-01 0.116 0.0884 0.444 MAIT L2
ENSG00000116641 DOCK7 396443 sc-eQTL 4.12e-01 0.0698 0.0849 0.444 MAIT L2
ENSG00000125703 ATG4C 300697 sc-eQTL 7.93e-01 0.0236 0.0897 0.444 MAIT L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 2.33e-01 0.107 0.0895 0.444 MAIT L2
ENSG00000162607 USP1 648532 sc-eQTL 9.76e-01 -0.00268 0.0891 0.444 MAIT L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 5.89e-01 0.05 0.0924 0.444 MAIT L2
ENSG00000079739 PGM1 -508582 sc-eQTL 4.63e-01 0.0658 0.0895 0.453 NK_CD56bright L2
ENSG00000088035 ALG6 -282746 sc-eQTL 9.01e-01 -0.0114 0.0918 0.453 NK_CD56bright L2
ENSG00000116641 DOCK7 396443 sc-eQTL 6.43e-01 0.037 0.0795 0.453 NK_CD56bright L2
ENSG00000125703 ATG4C 300697 sc-eQTL 1.64e-01 0.123 0.0885 0.453 NK_CD56bright L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.64e-01 -0.129 0.0921 0.453 NK_CD56bright L2
ENSG00000162607 USP1 648532 sc-eQTL 6.01e-01 0.05 0.0954 0.453 NK_CD56bright L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 7.64e-01 -0.0275 0.0913 0.453 NK_CD56bright L2
ENSG00000079739 PGM1 -508582 sc-eQTL 6.82e-01 -0.0291 0.0711 0.453 NK_CD56dim L2
ENSG00000088035 ALG6 -282746 sc-eQTL 1.91e-01 -0.118 0.0899 0.453 NK_CD56dim L2
ENSG00000116641 DOCK7 396443 sc-eQTL 2.53e-01 0.0897 0.0783 0.453 NK_CD56dim L2
ENSG00000125703 ATG4C 300697 sc-eQTL 5.90e-01 -0.043 0.0797 0.453 NK_CD56dim L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 9.78e-01 0.00247 0.0907 0.453 NK_CD56dim L2
ENSG00000162607 USP1 648532 sc-eQTL 5.78e-01 0.049 0.0879 0.453 NK_CD56dim L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 9.64e-01 0.00447 0.098 0.453 NK_CD56dim L2
ENSG00000079739 PGM1 -508582 sc-eQTL 8.41e-01 -0.0193 0.0961 0.445 NK_HLA L2
ENSG00000088035 ALG6 -282746 sc-eQTL 1.11e-03 0.321 0.097 0.445 NK_HLA L2
ENSG00000116641 DOCK7 396443 sc-eQTL 3.95e-01 0.0648 0.0761 0.445 NK_HLA L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.65e-01 0.0649 0.0885 0.445 NK_HLA L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 8.55e-01 0.017 0.0931 0.445 NK_HLA L2
ENSG00000162607 USP1 648532 sc-eQTL 1.76e-01 -0.132 0.0969 0.445 NK_HLA L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 4.58e-01 -0.0658 0.0885 0.445 NK_HLA L2
ENSG00000079739 PGM1 -508582 sc-eQTL 1.57e-01 -0.11 0.0772 0.453 NK_cytokine L2
ENSG00000088035 ALG6 -282746 sc-eQTL 5.33e-01 0.0547 0.0876 0.453 NK_cytokine L2
ENSG00000116641 DOCK7 396443 sc-eQTL 7.73e-01 -0.0235 0.0812 0.453 NK_cytokine L2
ENSG00000125703 ATG4C 300697 sc-eQTL 2.03e-01 0.106 0.0827 0.453 NK_cytokine L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.07e-01 0.138 0.0855 0.453 NK_cytokine L2
ENSG00000162607 USP1 648532 sc-eQTL 1.75e-01 -0.123 0.0901 0.453 NK_cytokine L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 8.05e-01 0.0227 0.0917 0.453 NK_cytokine L2
ENSG00000079739 PGM1 -508582 sc-eQTL 9.20e-01 0.0115 0.114 0.452 PB L2
ENSG00000088035 ALG6 -282746 sc-eQTL 5.46e-01 0.0724 0.12 0.452 PB L2
ENSG00000116641 DOCK7 396443 sc-eQTL 3.13e-01 0.129 0.128 0.452 PB L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.13e-01 0.0916 0.111 0.452 PB L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.58e-01 -0.157 0.111 0.452 PB L2
ENSG00000162607 USP1 648532 sc-eQTL 8.86e-01 0.016 0.111 0.452 PB L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 8.69e-01 0.0202 0.123 0.452 PB L2
ENSG00000079739 PGM1 -508582 sc-eQTL 3.47e-01 -0.0791 0.084 0.452 Pro_T L2
ENSG00000088035 ALG6 -282746 sc-eQTL 8.45e-01 0.0168 0.0857 0.452 Pro_T L2
ENSG00000116641 DOCK7 396443 sc-eQTL 9.38e-02 -0.144 0.0854 0.452 Pro_T L2
ENSG00000125703 ATG4C 300697 sc-eQTL 1.14e-02 -0.189 0.0741 0.452 Pro_T L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.99e-01 0.0969 0.0752 0.452 Pro_T L2
ENSG00000162607 USP1 648532 sc-eQTL 5.20e-01 -0.0334 0.0519 0.452 Pro_T L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 1.38e-01 0.13 0.0872 0.452 Pro_T L2
ENSG00000079739 PGM1 -508582 sc-eQTL 5.61e-02 0.168 0.0873 0.451 Treg L2
ENSG00000088035 ALG6 -282746 sc-eQTL 8.74e-01 -0.015 0.0941 0.451 Treg L2
ENSG00000116641 DOCK7 396443 sc-eQTL 1.05e-01 -0.14 0.0859 0.451 Treg L2
ENSG00000125703 ATG4C 300697 sc-eQTL 1.97e-01 0.114 0.0879 0.451 Treg L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.03e-01 0.15 0.0918 0.451 Treg L2
ENSG00000162607 USP1 648532 sc-eQTL 3.27e-01 0.0876 0.0892 0.451 Treg L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 2.22e-01 -0.108 0.0881 0.451 Treg L2
ENSG00000079739 PGM1 -508582 sc-eQTL 9.29e-01 0.00784 0.0873 0.439 cDC L2
ENSG00000088035 ALG6 -282746 sc-eQTL 6.89e-01 -0.0355 0.0885 0.439 cDC L2
ENSG00000116641 DOCK7 396443 sc-eQTL 6.46e-01 0.0399 0.0868 0.439 cDC L2
ENSG00000125703 ATG4C 300697 sc-eQTL 5.45e-01 -0.0457 0.0753 0.439 cDC L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 5.70e-01 0.0543 0.0955 0.439 cDC L2
ENSG00000162607 USP1 648532 sc-eQTL 5.95e-01 -0.0452 0.085 0.439 cDC L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 2.07e-01 0.0968 0.0765 0.439 cDC L2
ENSG00000079739 PGM1 -508582 sc-eQTL 2.31e-01 -0.1 0.0835 0.451 cMono_IL1B L2
ENSG00000088035 ALG6 -282746 sc-eQTL 6.09e-01 -0.043 0.0838 0.451 cMono_IL1B L2
ENSG00000116641 DOCK7 396443 sc-eQTL 4.64e-01 -0.0649 0.0883 0.451 cMono_IL1B L2
ENSG00000125703 ATG4C 300697 sc-eQTL 6.15e-01 0.0313 0.0621 0.451 cMono_IL1B L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 9.23e-02 0.148 0.0875 0.451 cMono_IL1B L2
ENSG00000162607 USP1 648532 sc-eQTL 1.39e-01 -0.115 0.0773 0.451 cMono_IL1B L2
ENSG00000240563 L1TD1 889980 sc-eQTL 2.06e-01 -0.0986 0.0778 0.451 cMono_IL1B L2
ENSG00000079739 PGM1 -508582 sc-eQTL 6.96e-01 -0.0361 0.0923 0.451 cMono_S100A L2
ENSG00000088035 ALG6 -282746 sc-eQTL 7.51e-01 -0.0298 0.0936 0.451 cMono_S100A L2
ENSG00000116641 DOCK7 396443 sc-eQTL 2.95e-01 -0.091 0.0866 0.451 cMono_S100A L2
ENSG00000125703 ATG4C 300697 sc-eQTL 9.48e-01 -0.00488 0.0751 0.451 cMono_S100A L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 1.04e-01 0.138 0.0842 0.451 cMono_S100A L2
ENSG00000162607 USP1 648532 sc-eQTL 8.56e-01 0.0159 0.0872 0.451 cMono_S100A L2
ENSG00000240563 L1TD1 889980 sc-eQTL 3.21e-01 -0.072 0.0724 0.451 cMono_S100A L2
ENSG00000079739 PGM1 -508582 sc-eQTL 9.66e-01 0.00455 0.107 0.433 gdT L2
ENSG00000088035 ALG6 -282746 sc-eQTL 6.32e-02 0.211 0.112 0.433 gdT L2
ENSG00000116641 DOCK7 396443 sc-eQTL 2.57e-01 -0.127 0.111 0.433 gdT L2
ENSG00000125703 ATG4C 300697 sc-eQTL 4.55e-01 0.0799 0.107 0.433 gdT L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 6.97e-02 0.205 0.112 0.433 gdT L2
ENSG00000162607 USP1 648532 sc-eQTL 3.55e-02 -0.224 0.106 0.433 gdT L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 1.12e-01 -0.177 0.111 0.433 gdT L2
ENSG00000079739 PGM1 -508582 sc-eQTL 4.65e-01 -0.0685 0.0935 0.451 intMono L2
ENSG00000088035 ALG6 -282746 sc-eQTL 1.63e-01 -0.121 0.0868 0.451 intMono L2
ENSG00000116641 DOCK7 396443 sc-eQTL 2.24e-02 0.202 0.0879 0.451 intMono L2
ENSG00000125703 ATG4C 300697 sc-eQTL 7.99e-01 -0.0216 0.085 0.451 intMono L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 2.10e-01 -0.117 0.0933 0.451 intMono L2
ENSG00000162607 USP1 648532 sc-eQTL 8.29e-01 -0.0206 0.0952 0.451 intMono L2
ENSG00000240563 L1TD1 889980 sc-eQTL 4.34e-02 -0.141 0.0693 0.451 intMono L2
ENSG00000079739 PGM1 -508582 sc-eQTL 4.68e-01 0.0618 0.0851 0.446 ncMono L2
ENSG00000088035 ALG6 -282746 sc-eQTL 7.49e-01 -0.0299 0.0936 0.446 ncMono L2
ENSG00000116641 DOCK7 396443 sc-eQTL 9.13e-01 -0.0101 0.0921 0.446 ncMono L2
ENSG00000125703 ATG4C 300697 sc-eQTL 7.14e-01 -0.0315 0.086 0.446 ncMono L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 5.82e-01 0.0496 0.0899 0.446 ncMono L2
ENSG00000162607 USP1 648532 sc-eQTL 3.04e-01 -0.0946 0.0917 0.446 ncMono L2
ENSG00000240563 L1TD1 889980 sc-eQTL 6.48e-01 -0.0298 0.0652 0.446 ncMono L2
ENSG00000079739 PGM1 -508582 sc-eQTL 4.43e-01 0.0766 0.0996 0.455 pDC L2
ENSG00000088035 ALG6 -282746 sc-eQTL 7.98e-01 -0.0249 0.0972 0.455 pDC L2
ENSG00000116641 DOCK7 396443 sc-eQTL 2.64e-01 -0.111 0.0989 0.455 pDC L2
ENSG00000125703 ATG4C 300697 sc-eQTL 8.96e-01 0.0116 0.089 0.455 pDC L2
ENSG00000142856 ITGB3BP -508892 sc-eQTL 3.27e-01 0.0979 0.0996 0.455 pDC L2
ENSG00000162607 USP1 648532 sc-eQTL 4.89e-01 -0.0705 0.102 0.455 pDC L2
ENSG00000203965 EFCAB7 -438543 sc-eQTL 8.31e-01 0.019 0.0885 0.455 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -508582 sc-eQTL 7.84e-01 0.0235 0.0858 0.451 B_Memory LOneK1K
ENSG00000088035 ALG6 -282746 sc-eQTL 2.40e-01 0.112 0.0946 0.451 B_Memory LOneK1K
ENSG00000116641 DOCK7 396443 sc-eQTL 8.89e-01 -0.0115 0.0823 0.451 B_Memory LOneK1K
ENSG00000125703 ATG4C 300697 sc-eQTL 9.33e-01 -0.00564 0.0666 0.451 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -508892 sc-eQTL 8.83e-02 0.149 0.0869 0.451 B_Memory LOneK1K
ENSG00000162607 USP1 648532 sc-eQTL 9.40e-01 0.00645 0.0849 0.451 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -438543 sc-eQTL 9.85e-01 -0.00176 0.0912 0.451 B_Memory LOneK1K
ENSG00000079739 PGM1 -508582 sc-eQTL 3.19e-01 0.0886 0.0887 0.451 B_Naive LOneK1K
ENSG00000088035 ALG6 -282746 sc-eQTL 9.36e-01 0.00739 0.0915 0.451 B_Naive LOneK1K
ENSG00000116641 DOCK7 396443 sc-eQTL 4.47e-02 0.171 0.0846 0.451 B_Naive LOneK1K
ENSG00000125703 ATG4C 300697 sc-eQTL 5.44e-01 0.0396 0.0651 0.451 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -508892 sc-eQTL 7.07e-01 0.0346 0.0922 0.451 B_Naive LOneK1K
ENSG00000162607 USP1 648532 sc-eQTL 1.48e-01 0.114 0.0788 0.451 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -438543 sc-eQTL 1.13e-01 0.146 0.0921 0.451 B_Naive LOneK1K
ENSG00000079739 PGM1 -508582 sc-eQTL 3.13e-01 -0.0864 0.0853 0.451 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -282746 sc-eQTL 3.08e-01 -0.0845 0.0826 0.451 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 396443 sc-eQTL 3.02e-01 -0.086 0.0832 0.451 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 300697 sc-eQTL 7.42e-01 0.019 0.0576 0.451 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -508892 sc-eQTL 5.53e-03 0.235 0.0838 0.451 CD14_Mono LOneK1K
ENSG00000162607 USP1 648532 sc-eQTL 3.26e-01 -0.0715 0.0727 0.451 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 889980 sc-eQTL 3.75e-01 -0.0701 0.0789 0.451 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -508582 sc-eQTL 6.02e-01 -0.0429 0.0822 0.453 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -282746 sc-eQTL 2.94e-01 -0.0981 0.0932 0.453 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 396443 sc-eQTL 2.98e-01 0.0963 0.0922 0.453 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 300697 sc-eQTL 5.17e-01 -0.0511 0.0787 0.453 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -508892 sc-eQTL 7.04e-01 -0.0347 0.0915 0.453 CD16_Mono LOneK1K
ENSG00000162607 USP1 648532 sc-eQTL 6.64e-01 -0.0373 0.0859 0.453 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 889980 sc-eQTL 1.89e-01 -0.077 0.0584 0.453 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -508582 sc-eQTL 2.49e-01 -0.0797 0.069 0.453 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -282746 sc-eQTL 9.64e-01 0.00378 0.0831 0.453 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 396443 sc-eQTL 5.26e-01 0.0473 0.0744 0.453 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 300697 sc-eQTL 3.52e-01 0.0691 0.0742 0.453 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -508892 sc-eQTL 3.67e-01 0.0795 0.0879 0.453 NK_CD56dim LOneK1K
ENSG00000162607 USP1 648532 sc-eQTL 4.85e-01 -0.0559 0.0798 0.453 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -438543 sc-eQTL 9.02e-01 -0.012 0.0973 0.453 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -508582 eQTL 0.0396 0.0378 0.0183 0.0 0.0 0.421

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000142856 \N -508892 7.3e-07 4e-07 1.12e-07 3.56e-07 9.45e-08 1.85e-07 4.53e-07 1.38e-07 3.62e-07 2.16e-07 4.74e-07 3.48e-07 6e-07 1.07e-07 1.71e-07 2.08e-07 2.53e-07 3.58e-07 1.77e-07 1.28e-07 1.92e-07 3.34e-07 3.07e-07 1.29e-07 5.75e-07 2.39e-07 2.52e-07 2.19e-07 2.84e-07 4.61e-07 2.19e-07 6.06e-08 4.74e-08 1.37e-07 3.04e-07 7.92e-08 1.03e-07 9.46e-08 4e-08 5.77e-08 4.82e-08 3.43e-07 3.55e-08 1.94e-08 1.19e-07 1.22e-08 1.24e-07 1.28e-08 6.03e-08