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Genes within 1Mb (chr1:63075447:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -517964 sc-eQTL 9.09e-01 0.0131 0.115 0.848 B L1
ENSG00000088035 ALG6 -292128 sc-eQTL 8.72e-01 -0.0192 0.119 0.848 B L1
ENSG00000116641 DOCK7 387061 sc-eQTL 7.83e-01 -0.0328 0.119 0.848 B L1
ENSG00000125703 ATG4C 291315 sc-eQTL 4.09e-01 0.0684 0.0827 0.848 B L1
ENSG00000142856 ITGB3BP -518274 sc-eQTL 5.14e-02 -0.256 0.131 0.848 B L1
ENSG00000162607 USP1 639150 sc-eQTL 8.95e-01 -0.0151 0.114 0.848 B L1
ENSG00000203965 EFCAB7 -447925 sc-eQTL 1.11e-01 -0.215 0.134 0.848 B L1
ENSG00000079739 PGM1 -517964 sc-eQTL 7.10e-01 0.0371 0.0997 0.848 CD4T L1
ENSG00000088035 ALG6 -292128 sc-eQTL 7.12e-01 0.0407 0.11 0.848 CD4T L1
ENSG00000116641 DOCK7 387061 sc-eQTL 6.20e-01 0.0553 0.111 0.848 CD4T L1
ENSG00000125703 ATG4C 291315 sc-eQTL 7.04e-01 0.0342 0.09 0.848 CD4T L1
ENSG00000142856 ITGB3BP -518274 sc-eQTL 3.76e-03 -0.367 0.125 0.848 CD4T L1
ENSG00000162607 USP1 639150 sc-eQTL 9.39e-01 -0.00675 0.0873 0.848 CD4T L1
ENSG00000203965 EFCAB7 -447925 sc-eQTL 2.05e-02 -0.264 0.113 0.848 CD4T L1
ENSG00000079739 PGM1 -517964 sc-eQTL 1.05e-01 0.173 0.106 0.848 CD8T L1
ENSG00000088035 ALG6 -292128 sc-eQTL 3.35e-02 0.249 0.116 0.848 CD8T L1
ENSG00000116641 DOCK7 387061 sc-eQTL 8.04e-01 0.0296 0.119 0.848 CD8T L1
ENSG00000125703 ATG4C 291315 sc-eQTL 5.58e-02 0.216 0.112 0.848 CD8T L1
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.87e-01 -0.167 0.126 0.848 CD8T L1
ENSG00000162607 USP1 639150 sc-eQTL 1.09e-01 -0.158 0.0981 0.848 CD8T L1
ENSG00000203965 EFCAB7 -447925 sc-eQTL 5.02e-01 -0.0848 0.126 0.848 CD8T L1
ENSG00000079739 PGM1 -517964 sc-eQTL 8.16e-01 -0.028 0.12 0.847 DC L1
ENSG00000088035 ALG6 -292128 sc-eQTL 6.32e-01 0.0593 0.124 0.847 DC L1
ENSG00000116641 DOCK7 387061 sc-eQTL 7.23e-02 -0.227 0.126 0.847 DC L1
ENSG00000125703 ATG4C 291315 sc-eQTL 5.45e-01 0.0601 0.0991 0.847 DC L1
ENSG00000142856 ITGB3BP -518274 sc-eQTL 2.27e-01 0.167 0.138 0.847 DC L1
ENSG00000162607 USP1 639150 sc-eQTL 6.84e-01 0.0493 0.121 0.847 DC L1
ENSG00000203965 EFCAB7 -447925 sc-eQTL 2.95e-01 -0.127 0.12 0.847 DC L1
ENSG00000079739 PGM1 -517964 sc-eQTL 8.79e-01 0.018 0.118 0.848 Mono L1
ENSG00000088035 ALG6 -292128 sc-eQTL 4.69e-01 0.0891 0.123 0.848 Mono L1
ENSG00000116641 DOCK7 387061 sc-eQTL 7.65e-01 0.0357 0.119 0.848 Mono L1
ENSG00000125703 ATG4C 291315 sc-eQTL 8.46e-01 -0.0156 0.0805 0.848 Mono L1
ENSG00000142856 ITGB3BP -518274 sc-eQTL 3.31e-01 -0.124 0.127 0.848 Mono L1
ENSG00000162607 USP1 639150 sc-eQTL 9.43e-01 -0.00753 0.104 0.848 Mono L1
ENSG00000240563 L1TD1 880598 sc-eQTL 4.45e-02 0.195 0.0965 0.848 Mono L1
ENSG00000079739 PGM1 -517964 sc-eQTL 4.48e-02 0.201 0.0996 0.85 NK L1
ENSG00000088035 ALG6 -292128 sc-eQTL 3.05e-01 0.121 0.118 0.85 NK L1
ENSG00000116641 DOCK7 387061 sc-eQTL 1.28e-02 -0.24 0.0957 0.85 NK L1
ENSG00000125703 ATG4C 291315 sc-eQTL 5.98e-01 -0.0551 0.104 0.85 NK L1
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.51e-03 -0.407 0.127 0.85 NK L1
ENSG00000162607 USP1 639150 sc-eQTL 1.35e-01 0.173 0.115 0.85 NK L1
ENSG00000203965 EFCAB7 -447925 sc-eQTL 5.62e-01 0.0817 0.141 0.85 NK L1
ENSG00000079739 PGM1 -517964 sc-eQTL 9.87e-01 -0.00189 0.113 0.848 Other_T L1
ENSG00000088035 ALG6 -292128 sc-eQTL 8.83e-01 0.0168 0.114 0.848 Other_T L1
ENSG00000116641 DOCK7 387061 sc-eQTL 3.54e-01 0.108 0.116 0.848 Other_T L1
ENSG00000125703 ATG4C 291315 sc-eQTL 2.11e-01 0.126 0.1 0.848 Other_T L1
ENSG00000142856 ITGB3BP -518274 sc-eQTL 6.19e-01 -0.0445 0.0892 0.848 Other_T L1
ENSG00000162607 USP1 639150 sc-eQTL 5.64e-01 0.0447 0.0773 0.848 Other_T L1
ENSG00000203965 EFCAB7 -447925 sc-eQTL 2.85e-02 -0.3 0.136 0.848 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -517964 sc-eQTL 4.57e-01 0.117 0.157 0.86 B_Activated L2
ENSG00000088035 ALG6 -292128 sc-eQTL 2.70e-01 -0.166 0.15 0.86 B_Activated L2
ENSG00000116641 DOCK7 387061 sc-eQTL 2.00e-01 -0.18 0.14 0.86 B_Activated L2
ENSG00000125703 ATG4C 291315 sc-eQTL 4.41e-01 -0.114 0.147 0.86 B_Activated L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 3.11e-01 -0.146 0.144 0.86 B_Activated L2
ENSG00000162607 USP1 639150 sc-eQTL 3.19e-01 -0.156 0.156 0.86 B_Activated L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 6.60e-01 -0.0603 0.137 0.86 B_Activated L2
ENSG00000079739 PGM1 -517964 sc-eQTL 7.97e-01 -0.0347 0.135 0.85 B_Intermediate L2
ENSG00000088035 ALG6 -292128 sc-eQTL 5.87e-01 0.0744 0.137 0.85 B_Intermediate L2
ENSG00000116641 DOCK7 387061 sc-eQTL 1.33e-01 0.196 0.13 0.85 B_Intermediate L2
ENSG00000125703 ATG4C 291315 sc-eQTL 3.10e-01 0.112 0.11 0.85 B_Intermediate L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 5.19e-01 -0.085 0.132 0.85 B_Intermediate L2
ENSG00000162607 USP1 639150 sc-eQTL 6.56e-01 0.0587 0.132 0.85 B_Intermediate L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 9.69e-01 0.00509 0.131 0.85 B_Intermediate L2
ENSG00000079739 PGM1 -517964 sc-eQTL 7.60e-01 0.0403 0.132 0.847 B_Memory L2
ENSG00000088035 ALG6 -292128 sc-eQTL 5.44e-01 0.0816 0.134 0.847 B_Memory L2
ENSG00000116641 DOCK7 387061 sc-eQTL 6.21e-01 -0.0624 0.126 0.847 B_Memory L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.12e-01 0.0442 0.12 0.847 B_Memory L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 5.11e-01 -0.0901 0.137 0.847 B_Memory L2
ENSG00000162607 USP1 639150 sc-eQTL 5.49e-01 -0.0829 0.138 0.847 B_Memory L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 9.31e-02 -0.228 0.135 0.847 B_Memory L2
ENSG00000079739 PGM1 -517964 sc-eQTL 2.80e-01 0.145 0.134 0.848 B_Naive1 L2
ENSG00000088035 ALG6 -292128 sc-eQTL 9.23e-01 0.013 0.135 0.848 B_Naive1 L2
ENSG00000116641 DOCK7 387061 sc-eQTL 1.70e-01 -0.177 0.129 0.848 B_Naive1 L2
ENSG00000125703 ATG4C 291315 sc-eQTL 4.82e-01 0.07 0.0994 0.848 B_Naive1 L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.26e-01 -0.202 0.131 0.848 B_Naive1 L2
ENSG00000162607 USP1 639150 sc-eQTL 6.58e-01 0.0515 0.116 0.848 B_Naive1 L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 3.65e-01 -0.127 0.141 0.848 B_Naive1 L2
ENSG00000079739 PGM1 -517964 sc-eQTL 9.11e-02 -0.22 0.13 0.848 B_Naive2 L2
ENSG00000088035 ALG6 -292128 sc-eQTL 8.29e-01 -0.0293 0.136 0.848 B_Naive2 L2
ENSG00000116641 DOCK7 387061 sc-eQTL 7.11e-01 0.0484 0.131 0.848 B_Naive2 L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.94e-01 0.033 0.126 0.848 B_Naive2 L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 3.49e-02 -0.287 0.135 0.848 B_Naive2 L2
ENSG00000162607 USP1 639150 sc-eQTL 1.53e-01 -0.185 0.129 0.848 B_Naive2 L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 3.55e-01 -0.126 0.136 0.848 B_Naive2 L2
ENSG00000079739 PGM1 -517964 sc-eQTL 6.52e-01 -0.0614 0.136 0.85 CD4_CTL L2
ENSG00000088035 ALG6 -292128 sc-eQTL 3.94e-01 0.123 0.144 0.85 CD4_CTL L2
ENSG00000116641 DOCK7 387061 sc-eQTL 2.15e-01 0.156 0.125 0.85 CD4_CTL L2
ENSG00000125703 ATG4C 291315 sc-eQTL 9.88e-01 0.00194 0.13 0.85 CD4_CTL L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 2.03e-02 -0.322 0.137 0.85 CD4_CTL L2
ENSG00000162607 USP1 639150 sc-eQTL 8.35e-01 0.0276 0.133 0.85 CD4_CTL L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 7.02e-02 -0.239 0.131 0.85 CD4_CTL L2
ENSG00000079739 PGM1 -517964 sc-eQTL 7.99e-01 0.0287 0.112 0.848 CD4_Naive L2
ENSG00000088035 ALG6 -292128 sc-eQTL 7.04e-01 -0.0463 0.122 0.848 CD4_Naive L2
ENSG00000116641 DOCK7 387061 sc-eQTL 1.35e-01 0.179 0.119 0.848 CD4_Naive L2
ENSG00000125703 ATG4C 291315 sc-eQTL 8.05e-01 0.0262 0.106 0.848 CD4_Naive L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.23e-03 -0.414 0.126 0.848 CD4_Naive L2
ENSG00000162607 USP1 639150 sc-eQTL 7.62e-01 0.03 0.099 0.848 CD4_Naive L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 8.60e-02 -0.22 0.128 0.848 CD4_Naive L2
ENSG00000079739 PGM1 -517964 sc-eQTL 6.49e-01 -0.0526 0.116 0.848 CD4_TCM L2
ENSG00000088035 ALG6 -292128 sc-eQTL 1.99e-01 0.172 0.134 0.848 CD4_TCM L2
ENSG00000116641 DOCK7 387061 sc-eQTL 5.56e-01 0.0701 0.119 0.848 CD4_TCM L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.65e-01 -0.0347 0.116 0.848 CD4_TCM L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.77e-01 -0.184 0.136 0.848 CD4_TCM L2
ENSG00000162607 USP1 639150 sc-eQTL 1.73e-01 -0.152 0.111 0.848 CD4_TCM L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 1.94e-01 -0.171 0.132 0.848 CD4_TCM L2
ENSG00000079739 PGM1 -517964 sc-eQTL 3.14e-02 0.29 0.134 0.848 CD4_TEM L2
ENSG00000088035 ALG6 -292128 sc-eQTL 1.95e-01 0.176 0.136 0.848 CD4_TEM L2
ENSG00000116641 DOCK7 387061 sc-eQTL 6.79e-01 0.0551 0.133 0.848 CD4_TEM L2
ENSG00000125703 ATG4C 291315 sc-eQTL 2.81e-01 0.139 0.129 0.848 CD4_TEM L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.58e-01 -0.188 0.133 0.848 CD4_TEM L2
ENSG00000162607 USP1 639150 sc-eQTL 8.03e-02 -0.22 0.125 0.848 CD4_TEM L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 3.32e-01 -0.134 0.138 0.848 CD4_TEM L2
ENSG00000079739 PGM1 -517964 sc-eQTL 4.49e-01 0.0923 0.122 0.848 CD8_CTL L2
ENSG00000088035 ALG6 -292128 sc-eQTL 7.81e-01 -0.036 0.129 0.848 CD8_CTL L2
ENSG00000116641 DOCK7 387061 sc-eQTL 8.05e-01 0.0304 0.123 0.848 CD8_CTL L2
ENSG00000125703 ATG4C 291315 sc-eQTL 4.81e-01 -0.0922 0.131 0.848 CD8_CTL L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 3.77e-01 0.12 0.136 0.848 CD8_CTL L2
ENSG00000162607 USP1 639150 sc-eQTL 3.89e-01 -0.105 0.122 0.848 CD8_CTL L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 6.23e-01 -0.0685 0.139 0.848 CD8_CTL L2
ENSG00000079739 PGM1 -517964 sc-eQTL 2.83e-01 0.134 0.125 0.848 CD8_Naive L2
ENSG00000088035 ALG6 -292128 sc-eQTL 3.03e-03 0.38 0.127 0.848 CD8_Naive L2
ENSG00000116641 DOCK7 387061 sc-eQTL 7.09e-01 -0.05 0.134 0.848 CD8_Naive L2
ENSG00000125703 ATG4C 291315 sc-eQTL 9.96e-02 0.211 0.128 0.848 CD8_Naive L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 4.99e-01 -0.0881 0.13 0.848 CD8_Naive L2
ENSG00000162607 USP1 639150 sc-eQTL 8.62e-02 -0.188 0.109 0.848 CD8_Naive L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 4.43e-01 -0.0942 0.122 0.848 CD8_Naive L2
ENSG00000079739 PGM1 -517964 sc-eQTL 4.73e-01 -0.096 0.134 0.85 CD8_TCM L2
ENSG00000088035 ALG6 -292128 sc-eQTL 1.68e-01 0.186 0.135 0.85 CD8_TCM L2
ENSG00000116641 DOCK7 387061 sc-eQTL 8.22e-01 0.0298 0.132 0.85 CD8_TCM L2
ENSG00000125703 ATG4C 291315 sc-eQTL 2.02e-01 0.172 0.135 0.85 CD8_TCM L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.22e-01 -0.203 0.131 0.85 CD8_TCM L2
ENSG00000162607 USP1 639150 sc-eQTL 8.34e-01 0.0265 0.126 0.85 CD8_TCM L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 4.55e-01 0.1 0.134 0.85 CD8_TCM L2
ENSG00000079739 PGM1 -517964 sc-eQTL 3.73e-01 0.126 0.141 0.852 CD8_TEM L2
ENSG00000088035 ALG6 -292128 sc-eQTL 5.80e-01 0.0784 0.142 0.852 CD8_TEM L2
ENSG00000116641 DOCK7 387061 sc-eQTL 9.02e-02 0.232 0.136 0.852 CD8_TEM L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.74e-01 0.038 0.132 0.852 CD8_TEM L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 8.76e-01 -0.0224 0.143 0.852 CD8_TEM L2
ENSG00000162607 USP1 639150 sc-eQTL 2.36e-01 -0.162 0.136 0.852 CD8_TEM L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 5.80e-01 0.0768 0.138 0.852 CD8_TEM L2
ENSG00000079739 PGM1 -517964 sc-eQTL 1.75e-01 0.184 0.135 0.851 MAIT L2
ENSG00000088035 ALG6 -292128 sc-eQTL 9.77e-01 0.00387 0.134 0.851 MAIT L2
ENSG00000116641 DOCK7 387061 sc-eQTL 3.78e-01 0.113 0.128 0.851 MAIT L2
ENSG00000125703 ATG4C 291315 sc-eQTL 8.08e-01 -0.0329 0.135 0.851 MAIT L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 6.40e-02 -0.251 0.135 0.851 MAIT L2
ENSG00000162607 USP1 639150 sc-eQTL 3.70e-01 -0.121 0.134 0.851 MAIT L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 2.45e-01 -0.162 0.139 0.851 MAIT L2
ENSG00000079739 PGM1 -517964 sc-eQTL 5.57e-02 0.248 0.129 0.849 NK_CD56bright L2
ENSG00000088035 ALG6 -292128 sc-eQTL 5.48e-01 0.08 0.133 0.849 NK_CD56bright L2
ENSG00000116641 DOCK7 387061 sc-eQTL 6.68e-03 -0.31 0.113 0.849 NK_CD56bright L2
ENSG00000125703 ATG4C 291315 sc-eQTL 3.33e-01 -0.125 0.129 0.849 NK_CD56bright L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.49e-01 -0.193 0.133 0.849 NK_CD56bright L2
ENSG00000162607 USP1 639150 sc-eQTL 5.91e-01 0.0743 0.138 0.849 NK_CD56bright L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 8.67e-01 0.0222 0.132 0.849 NK_CD56bright L2
ENSG00000079739 PGM1 -517964 sc-eQTL 3.93e-03 0.298 0.102 0.851 NK_CD56dim L2
ENSG00000088035 ALG6 -292128 sc-eQTL 9.53e-01 0.00781 0.132 0.851 NK_CD56dim L2
ENSG00000116641 DOCK7 387061 sc-eQTL 2.43e-01 -0.134 0.115 0.851 NK_CD56dim L2
ENSG00000125703 ATG4C 291315 sc-eQTL 3.71e-01 -0.104 0.117 0.851 NK_CD56dim L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.20e-02 -0.332 0.131 0.851 NK_CD56dim L2
ENSG00000162607 USP1 639150 sc-eQTL 4.60e-01 0.0952 0.129 0.851 NK_CD56dim L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 9.41e-01 0.0107 0.144 0.851 NK_CD56dim L2
ENSG00000079739 PGM1 -517964 sc-eQTL 4.64e-01 0.104 0.141 0.852 NK_HLA L2
ENSG00000088035 ALG6 -292128 sc-eQTL 4.88e-01 -0.102 0.146 0.852 NK_HLA L2
ENSG00000116641 DOCK7 387061 sc-eQTL 3.21e-01 0.111 0.112 0.852 NK_HLA L2
ENSG00000125703 ATG4C 291315 sc-eQTL 6.33e-01 0.0624 0.13 0.852 NK_HLA L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 9.96e-02 -0.225 0.136 0.852 NK_HLA L2
ENSG00000162607 USP1 639150 sc-eQTL 6.83e-01 0.0586 0.143 0.852 NK_HLA L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 5.46e-02 -0.25 0.129 0.852 NK_HLA L2
ENSG00000079739 PGM1 -517964 sc-eQTL 6.40e-01 0.0536 0.114 0.851 NK_cytokine L2
ENSG00000088035 ALG6 -292128 sc-eQTL 3.87e-01 0.112 0.129 0.851 NK_cytokine L2
ENSG00000116641 DOCK7 387061 sc-eQTL 8.32e-01 -0.0255 0.12 0.851 NK_cytokine L2
ENSG00000125703 ATG4C 291315 sc-eQTL 1.48e-01 0.177 0.122 0.851 NK_cytokine L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 5.38e-01 -0.0783 0.127 0.851 NK_cytokine L2
ENSG00000162607 USP1 639150 sc-eQTL 5.35e-01 0.0828 0.133 0.851 NK_cytokine L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 2.64e-01 0.151 0.135 0.851 NK_cytokine L2
ENSG00000079739 PGM1 -517964 sc-eQTL 8.54e-01 0.0301 0.163 0.844 PB L2
ENSG00000088035 ALG6 -292128 sc-eQTL 4.17e-01 -0.139 0.171 0.844 PB L2
ENSG00000116641 DOCK7 387061 sc-eQTL 9.88e-01 -0.0028 0.183 0.844 PB L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.71e-01 0.0466 0.159 0.844 PB L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 2.96e-01 -0.166 0.158 0.844 PB L2
ENSG00000162607 USP1 639150 sc-eQTL 8.71e-01 0.0257 0.158 0.844 PB L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 2.89e-01 -0.185 0.174 0.844 PB L2
ENSG00000079739 PGM1 -517964 sc-eQTL 2.63e-02 -0.269 0.12 0.846 Pro_T L2
ENSG00000088035 ALG6 -292128 sc-eQTL 7.87e-01 -0.0335 0.124 0.846 Pro_T L2
ENSG00000116641 DOCK7 387061 sc-eQTL 5.20e-01 -0.08 0.124 0.846 Pro_T L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.54e-01 -0.0342 0.109 0.846 Pro_T L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.59e-01 0.154 0.109 0.846 Pro_T L2
ENSG00000162607 USP1 639150 sc-eQTL 1.29e-01 0.114 0.0747 0.846 Pro_T L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 3.14e-01 -0.128 0.127 0.846 Pro_T L2
ENSG00000079739 PGM1 -517964 sc-eQTL 9.52e-01 -0.00763 0.127 0.848 Treg L2
ENSG00000088035 ALG6 -292128 sc-eQTL 3.68e-01 -0.122 0.136 0.848 Treg L2
ENSG00000116641 DOCK7 387061 sc-eQTL 3.53e-01 -0.116 0.124 0.848 Treg L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.63e-02 0.225 0.127 0.848 Treg L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 2.25e-01 0.162 0.133 0.848 Treg L2
ENSG00000162607 USP1 639150 sc-eQTL 8.99e-01 0.0164 0.129 0.848 Treg L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 1.52e-01 0.183 0.127 0.848 Treg L2
ENSG00000079739 PGM1 -517964 sc-eQTL 1.91e-01 -0.17 0.129 0.851 cDC L2
ENSG00000088035 ALG6 -292128 sc-eQTL 4.74e-01 0.0946 0.132 0.851 cDC L2
ENSG00000116641 DOCK7 387061 sc-eQTL 3.67e-02 -0.269 0.128 0.851 cDC L2
ENSG00000125703 ATG4C 291315 sc-eQTL 8.56e-01 0.0205 0.112 0.851 cDC L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 7.28e-01 0.0495 0.142 0.851 cDC L2
ENSG00000162607 USP1 639150 sc-eQTL 9.18e-01 -0.013 0.127 0.851 cDC L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 4.45e-01 -0.0874 0.114 0.851 cDC L2
ENSG00000079739 PGM1 -517964 sc-eQTL 2.82e-01 0.132 0.122 0.848 cMono_IL1B L2
ENSG00000088035 ALG6 -292128 sc-eQTL 9.50e-01 0.00776 0.123 0.848 cMono_IL1B L2
ENSG00000116641 DOCK7 387061 sc-eQTL 7.09e-01 -0.0483 0.129 0.848 cMono_IL1B L2
ENSG00000125703 ATG4C 291315 sc-eQTL 8.65e-01 0.0154 0.0909 0.848 cMono_IL1B L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 3.11e-01 -0.131 0.128 0.848 cMono_IL1B L2
ENSG00000162607 USP1 639150 sc-eQTL 7.43e-01 -0.0373 0.114 0.848 cMono_IL1B L2
ENSG00000240563 L1TD1 880598 sc-eQTL 1.67e-01 0.157 0.114 0.848 cMono_IL1B L2
ENSG00000079739 PGM1 -517964 sc-eQTL 1.54e-01 -0.194 0.135 0.848 cMono_S100A L2
ENSG00000088035 ALG6 -292128 sc-eQTL 6.95e-01 0.054 0.138 0.848 cMono_S100A L2
ENSG00000116641 DOCK7 387061 sc-eQTL 5.87e-01 0.0694 0.128 0.848 cMono_S100A L2
ENSG00000125703 ATG4C 291315 sc-eQTL 6.70e-01 -0.0472 0.111 0.848 cMono_S100A L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 7.87e-01 -0.0337 0.125 0.848 cMono_S100A L2
ENSG00000162607 USP1 639150 sc-eQTL 4.84e-01 -0.0899 0.128 0.848 cMono_S100A L2
ENSG00000240563 L1TD1 880598 sc-eQTL 3.04e-01 0.11 0.107 0.848 cMono_S100A L2
ENSG00000079739 PGM1 -517964 sc-eQTL 8.93e-01 0.0204 0.152 0.861 gdT L2
ENSG00000088035 ALG6 -292128 sc-eQTL 7.00e-01 0.0625 0.162 0.861 gdT L2
ENSG00000116641 DOCK7 387061 sc-eQTL 9.42e-01 -0.0116 0.159 0.861 gdT L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.94e-03 0.399 0.148 0.861 gdT L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 5.27e-01 0.102 0.161 0.861 gdT L2
ENSG00000162607 USP1 639150 sc-eQTL 5.29e-01 0.0961 0.152 0.861 gdT L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 8.98e-01 -0.0203 0.159 0.861 gdT L2
ENSG00000079739 PGM1 -517964 sc-eQTL 4.70e-02 0.272 0.136 0.851 intMono L2
ENSG00000088035 ALG6 -292128 sc-eQTL 6.55e-01 0.0573 0.128 0.851 intMono L2
ENSG00000116641 DOCK7 387061 sc-eQTL 9.38e-01 0.0103 0.131 0.851 intMono L2
ENSG00000125703 ATG4C 291315 sc-eQTL 7.46e-01 0.0405 0.125 0.851 intMono L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 2.92e-01 -0.145 0.137 0.851 intMono L2
ENSG00000162607 USP1 639150 sc-eQTL 1.04e-01 -0.227 0.139 0.851 intMono L2
ENSG00000240563 L1TD1 880598 sc-eQTL 8.98e-01 -0.0132 0.103 0.851 intMono L2
ENSG00000079739 PGM1 -517964 sc-eQTL 2.83e-01 -0.132 0.122 0.848 ncMono L2
ENSG00000088035 ALG6 -292128 sc-eQTL 8.06e-01 0.0332 0.135 0.848 ncMono L2
ENSG00000116641 DOCK7 387061 sc-eQTL 1.21e-01 0.206 0.132 0.848 ncMono L2
ENSG00000125703 ATG4C 291315 sc-eQTL 6.43e-01 0.0576 0.124 0.848 ncMono L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 7.79e-01 0.0364 0.13 0.848 ncMono L2
ENSG00000162607 USP1 639150 sc-eQTL 9.06e-01 0.0156 0.133 0.848 ncMono L2
ENSG00000240563 L1TD1 880598 sc-eQTL 2.90e-01 0.0994 0.0937 0.848 ncMono L2
ENSG00000079739 PGM1 -517964 sc-eQTL 1.70e-01 0.193 0.14 0.839 pDC L2
ENSG00000088035 ALG6 -292128 sc-eQTL 9.34e-01 -0.0113 0.137 0.839 pDC L2
ENSG00000116641 DOCK7 387061 sc-eQTL 2.25e-01 -0.17 0.14 0.839 pDC L2
ENSG00000125703 ATG4C 291315 sc-eQTL 4.24e-01 0.101 0.126 0.839 pDC L2
ENSG00000142856 ITGB3BP -518274 sc-eQTL 1.68e-01 0.195 0.14 0.839 pDC L2
ENSG00000162607 USP1 639150 sc-eQTL 9.20e-01 0.0146 0.144 0.839 pDC L2
ENSG00000203965 EFCAB7 -447925 sc-eQTL 3.31e-01 -0.122 0.125 0.839 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -517964 sc-eQTL 8.28e-01 -0.028 0.128 0.848 B_Memory LOneK1K
ENSG00000088035 ALG6 -292128 sc-eQTL 4.00e-01 0.12 0.142 0.848 B_Memory LOneK1K
ENSG00000116641 DOCK7 387061 sc-eQTL 4.85e-01 0.0861 0.123 0.848 B_Memory LOneK1K
ENSG00000125703 ATG4C 291315 sc-eQTL 9.72e-01 -0.00351 0.0997 0.848 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -518274 sc-eQTL 3.79e-01 -0.115 0.131 0.848 B_Memory LOneK1K
ENSG00000162607 USP1 639150 sc-eQTL 8.71e-01 -0.0207 0.127 0.848 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -447925 sc-eQTL 5.98e-01 -0.072 0.136 0.848 B_Memory LOneK1K
ENSG00000079739 PGM1 -517964 sc-eQTL 7.82e-01 -0.0366 0.132 0.848 B_Naive LOneK1K
ENSG00000088035 ALG6 -292128 sc-eQTL 7.18e-01 -0.0492 0.136 0.848 B_Naive LOneK1K
ENSG00000116641 DOCK7 387061 sc-eQTL 3.40e-01 -0.121 0.127 0.848 B_Naive LOneK1K
ENSG00000125703 ATG4C 291315 sc-eQTL 4.83e-01 0.0679 0.0967 0.848 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -518274 sc-eQTL 7.71e-02 -0.241 0.136 0.848 B_Naive LOneK1K
ENSG00000162607 USP1 639150 sc-eQTL 8.87e-01 -0.0167 0.118 0.848 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -447925 sc-eQTL 3.58e-01 -0.126 0.137 0.848 B_Naive LOneK1K
ENSG00000079739 PGM1 -517964 sc-eQTL 9.29e-01 -0.0111 0.126 0.848 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -292128 sc-eQTL 8.01e-01 0.0307 0.122 0.848 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 387061 sc-eQTL 9.54e-01 -0.00714 0.123 0.848 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 291315 sc-eQTL 8.36e-01 -0.0175 0.0847 0.848 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -518274 sc-eQTL 2.92e-01 -0.132 0.125 0.848 CD14_Mono LOneK1K
ENSG00000162607 USP1 639150 sc-eQTL 3.22e-01 -0.106 0.107 0.848 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 880598 sc-eQTL 2.64e-01 0.13 0.116 0.848 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -517964 sc-eQTL 5.58e-01 0.0696 0.118 0.849 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -292128 sc-eQTL 4.57e-01 0.1 0.134 0.849 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 387061 sc-eQTL 9.78e-02 0.22 0.132 0.849 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 291315 sc-eQTL 8.24e-01 -0.0253 0.114 0.849 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -518274 sc-eQTL 5.35e-01 -0.0818 0.132 0.849 CD16_Mono LOneK1K
ENSG00000162607 USP1 639150 sc-eQTL 8.38e-01 0.0254 0.124 0.849 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 880598 sc-eQTL 2.63e-01 0.0945 0.0843 0.849 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -517964 sc-eQTL 1.55e-01 0.146 0.102 0.851 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -292128 sc-eQTL 3.69e-01 0.111 0.123 0.851 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 387061 sc-eQTL 4.31e-01 -0.0871 0.11 0.851 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 291315 sc-eQTL 9.85e-01 -0.00205 0.11 0.851 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -518274 sc-eQTL 4.57e-03 -0.368 0.128 0.851 NK_CD56dim LOneK1K
ENSG00000162607 USP1 639150 sc-eQTL 2.34e-01 0.141 0.118 0.851 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -447925 sc-eQTL 7.13e-01 0.0531 0.144 0.851 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -517964 eQTL 0.00152 0.0774 0.0243 0.00428 0.0 0.159
ENSG00000116641 DOCK7 387079 eQTL 0.0349 -0.0639 0.0302 0.0 0.0 0.159

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina