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Genes within 1Mb (chr1:63074034:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -519377 sc-eQTL 1.20e-01 0.136 0.0871 0.669 B L1
ENSG00000088035 ALG6 -293541 sc-eQTL 3.52e-01 -0.0844 0.0906 0.669 B L1
ENSG00000116641 DOCK7 385648 sc-eQTL 7.37e-01 0.0305 0.0908 0.669 B L1
ENSG00000125703 ATG4C 289902 sc-eQTL 8.07e-02 0.11 0.0627 0.669 B L1
ENSG00000142856 ITGB3BP -519687 sc-eQTL 9.09e-01 0.0115 0.1 0.669 B L1
ENSG00000162607 USP1 637737 sc-eQTL 6.44e-01 0.0403 0.0871 0.669 B L1
ENSG00000203965 EFCAB7 -449338 sc-eQTL 6.18e-01 0.0513 0.103 0.669 B L1
ENSG00000079739 PGM1 -519377 sc-eQTL 2.00e-01 0.0978 0.0761 0.669 CD4T L1
ENSG00000088035 ALG6 -293541 sc-eQTL 3.55e-01 0.078 0.0842 0.669 CD4T L1
ENSG00000116641 DOCK7 385648 sc-eQTL 7.56e-01 0.0266 0.0854 0.669 CD4T L1
ENSG00000125703 ATG4C 289902 sc-eQTL 1.89e-01 0.0904 0.0687 0.669 CD4T L1
ENSG00000142856 ITGB3BP -519687 sc-eQTL 4.06e-01 0.0814 0.0977 0.669 CD4T L1
ENSG00000162607 USP1 637737 sc-eQTL 9.69e-01 -0.00259 0.0669 0.669 CD4T L1
ENSG00000203965 EFCAB7 -449338 sc-eQTL 3.43e-01 0.0833 0.0877 0.669 CD4T L1
ENSG00000079739 PGM1 -519377 sc-eQTL 4.97e-03 0.236 0.0833 0.669 CD8T L1
ENSG00000088035 ALG6 -293541 sc-eQTL 7.65e-01 -0.0279 0.0935 0.669 CD8T L1
ENSG00000116641 DOCK7 385648 sc-eQTL 2.50e-01 0.109 0.0944 0.669 CD8T L1
ENSG00000125703 ATG4C 289902 sc-eQTL 7.09e-01 -0.0336 0.09 0.669 CD8T L1
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.24e-01 0.0493 0.101 0.669 CD8T L1
ENSG00000162607 USP1 637737 sc-eQTL 1.36e-01 0.117 0.078 0.669 CD8T L1
ENSG00000203965 EFCAB7 -449338 sc-eQTL 7.95e-02 0.176 0.0996 0.669 CD8T L1
ENSG00000079739 PGM1 -519377 sc-eQTL 2.24e-01 0.115 0.0945 0.664 DC L1
ENSG00000088035 ALG6 -293541 sc-eQTL 1.98e-01 0.126 0.0975 0.664 DC L1
ENSG00000116641 DOCK7 385648 sc-eQTL 4.43e-01 -0.077 0.1 0.664 DC L1
ENSG00000125703 ATG4C 289902 sc-eQTL 8.27e-01 -0.0172 0.0785 0.664 DC L1
ENSG00000142856 ITGB3BP -519687 sc-eQTL 3.75e-01 0.0974 0.11 0.664 DC L1
ENSG00000162607 USP1 637737 sc-eQTL 5.78e-01 -0.0534 0.0958 0.664 DC L1
ENSG00000203965 EFCAB7 -449338 sc-eQTL 8.47e-01 -0.0184 0.0956 0.664 DC L1
ENSG00000079739 PGM1 -519377 sc-eQTL 1.44e-02 0.22 0.0893 0.669 Mono L1
ENSG00000088035 ALG6 -293541 sc-eQTL 8.04e-02 0.165 0.0939 0.669 Mono L1
ENSG00000116641 DOCK7 385648 sc-eQTL 7.27e-01 -0.032 0.0914 0.669 Mono L1
ENSG00000125703 ATG4C 289902 sc-eQTL 7.46e-01 0.02 0.0618 0.669 Mono L1
ENSG00000142856 ITGB3BP -519687 sc-eQTL 7.95e-01 -0.0254 0.0976 0.669 Mono L1
ENSG00000162607 USP1 637737 sc-eQTL 4.17e-01 -0.0651 0.0801 0.669 Mono L1
ENSG00000240563 L1TD1 879185 sc-eQTL 5.63e-01 -0.0434 0.0748 0.669 Mono L1
ENSG00000079739 PGM1 -519377 sc-eQTL 5.17e-01 0.0505 0.0779 0.67 NK L1
ENSG00000088035 ALG6 -293541 sc-eQTL 7.32e-01 0.0314 0.0914 0.67 NK L1
ENSG00000116641 DOCK7 385648 sc-eQTL 1.28e-01 0.115 0.0749 0.67 NK L1
ENSG00000125703 ATG4C 289902 sc-eQTL 5.73e-01 0.0457 0.0808 0.67 NK L1
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.42e-02 0.186 0.0997 0.67 NK L1
ENSG00000162607 USP1 637737 sc-eQTL 9.16e-01 -0.00948 0.0898 0.67 NK L1
ENSG00000203965 EFCAB7 -449338 sc-eQTL 2.50e-02 -0.243 0.108 0.67 NK L1
ENSG00000079739 PGM1 -519377 sc-eQTL 5.03e-01 0.0601 0.0894 0.669 Other_T L1
ENSG00000088035 ALG6 -293541 sc-eQTL 3.72e-01 0.0803 0.0898 0.669 Other_T L1
ENSG00000116641 DOCK7 385648 sc-eQTL 3.96e-01 0.0779 0.0917 0.669 Other_T L1
ENSG00000125703 ATG4C 289902 sc-eQTL 7.95e-01 -0.0207 0.0795 0.669 Other_T L1
ENSG00000142856 ITGB3BP -519687 sc-eQTL 4.04e-01 0.0589 0.0704 0.669 Other_T L1
ENSG00000162607 USP1 637737 sc-eQTL 6.90e-01 -0.0244 0.0611 0.669 Other_T L1
ENSG00000203965 EFCAB7 -449338 sc-eQTL 3.26e-01 -0.107 0.109 0.669 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -519377 sc-eQTL 2.00e-01 0.147 0.114 0.663 B_Activated L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.59e-01 0.124 0.11 0.663 B_Activated L2
ENSG00000116641 DOCK7 385648 sc-eQTL 3.95e-01 0.0872 0.102 0.663 B_Activated L2
ENSG00000125703 ATG4C 289902 sc-eQTL 4.93e-02 -0.211 0.107 0.663 B_Activated L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.21e-01 0.0239 0.105 0.663 B_Activated L2
ENSG00000162607 USP1 637737 sc-eQTL 4.95e-01 0.078 0.114 0.663 B_Activated L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 5.00e-01 -0.0673 0.0996 0.663 B_Activated L2
ENSG00000079739 PGM1 -519377 sc-eQTL 1.84e-01 0.139 0.104 0.67 B_Intermediate L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.48e-01 -0.123 0.106 0.67 B_Intermediate L2
ENSG00000116641 DOCK7 385648 sc-eQTL 5.07e-01 0.0677 0.102 0.67 B_Intermediate L2
ENSG00000125703 ATG4C 289902 sc-eQTL 1.88e-01 0.113 0.0858 0.67 B_Intermediate L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 3.39e-01 -0.0982 0.102 0.67 B_Intermediate L2
ENSG00000162607 USP1 637737 sc-eQTL 5.08e-01 -0.0679 0.102 0.67 B_Intermediate L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.38e-01 -0.151 0.101 0.67 B_Intermediate L2
ENSG00000079739 PGM1 -519377 sc-eQTL 7.73e-01 -0.0297 0.103 0.666 B_Memory L2
ENSG00000088035 ALG6 -293541 sc-eQTL 6.41e-01 -0.049 0.105 0.666 B_Memory L2
ENSG00000116641 DOCK7 385648 sc-eQTL 4.93e-01 -0.0675 0.0983 0.666 B_Memory L2
ENSG00000125703 ATG4C 289902 sc-eQTL 9.78e-01 0.00264 0.0936 0.666 B_Memory L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.24e-01 0.0239 0.107 0.666 B_Memory L2
ENSG00000162607 USP1 637737 sc-eQTL 6.67e-01 0.0465 0.108 0.666 B_Memory L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.71e-01 -0.145 0.106 0.666 B_Memory L2
ENSG00000079739 PGM1 -519377 sc-eQTL 2.53e-01 0.12 0.105 0.669 B_Naive1 L2
ENSG00000088035 ALG6 -293541 sc-eQTL 9.22e-01 -0.0103 0.105 0.669 B_Naive1 L2
ENSG00000116641 DOCK7 385648 sc-eQTL 4.08e-01 0.0835 0.101 0.669 B_Naive1 L2
ENSG00000125703 ATG4C 289902 sc-eQTL 5.37e-01 0.048 0.0777 0.669 B_Naive1 L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 2.64e-01 0.115 0.103 0.669 B_Naive1 L2
ENSG00000162607 USP1 637737 sc-eQTL 2.54e-01 0.103 0.0904 0.669 B_Naive1 L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 4.96e-01 0.0749 0.11 0.669 B_Naive1 L2
ENSG00000079739 PGM1 -519377 sc-eQTL 2.76e-01 0.113 0.103 0.667 B_Naive2 L2
ENSG00000088035 ALG6 -293541 sc-eQTL 9.65e-01 0.00468 0.108 0.667 B_Naive2 L2
ENSG00000116641 DOCK7 385648 sc-eQTL 3.62e-01 -0.0946 0.104 0.667 B_Naive2 L2
ENSG00000125703 ATG4C 289902 sc-eQTL 9.89e-01 -0.00144 0.1 0.667 B_Naive2 L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 2.56e-02 -0.241 0.107 0.667 B_Naive2 L2
ENSG00000162607 USP1 637737 sc-eQTL 8.69e-01 0.0171 0.103 0.667 B_Naive2 L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.55e-01 0.153 0.107 0.667 B_Naive2 L2
ENSG00000079739 PGM1 -519377 sc-eQTL 3.05e-01 -0.109 0.106 0.664 CD4_CTL L2
ENSG00000088035 ALG6 -293541 sc-eQTL 5.46e-01 0.0678 0.112 0.664 CD4_CTL L2
ENSG00000116641 DOCK7 385648 sc-eQTL 9.98e-01 0.000203 0.0981 0.664 CD4_CTL L2
ENSG00000125703 ATG4C 289902 sc-eQTL 1.65e-01 0.141 0.101 0.664 CD4_CTL L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 9.57e-01 -0.00585 0.109 0.664 CD4_CTL L2
ENSG00000162607 USP1 637737 sc-eQTL 9.88e-01 -0.00156 0.103 0.664 CD4_CTL L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 4.90e-01 -0.0713 0.103 0.664 CD4_CTL L2
ENSG00000079739 PGM1 -519377 sc-eQTL 9.43e-02 0.143 0.0851 0.669 CD4_Naive L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.90e-01 0.0984 0.0928 0.669 CD4_Naive L2
ENSG00000116641 DOCK7 385648 sc-eQTL 3.44e-01 0.0866 0.0913 0.669 CD4_Naive L2
ENSG00000125703 ATG4C 289902 sc-eQTL 4.97e-01 0.055 0.0808 0.669 CD4_Naive L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.78e-01 0.0152 0.0988 0.669 CD4_Naive L2
ENSG00000162607 USP1 637737 sc-eQTL 9.87e-01 -0.00125 0.0755 0.669 CD4_Naive L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 5.35e-01 0.0609 0.098 0.669 CD4_Naive L2
ENSG00000079739 PGM1 -519377 sc-eQTL 4.43e-01 0.0684 0.089 0.669 CD4_TCM L2
ENSG00000088035 ALG6 -293541 sc-eQTL 9.58e-01 -0.00543 0.103 0.669 CD4_TCM L2
ENSG00000116641 DOCK7 385648 sc-eQTL 1.85e-01 -0.121 0.0913 0.669 CD4_TCM L2
ENSG00000125703 ATG4C 289902 sc-eQTL 5.59e-01 0.0522 0.0892 0.669 CD4_TCM L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 2.63e-01 0.118 0.105 0.669 CD4_TCM L2
ENSG00000162607 USP1 637737 sc-eQTL 3.53e-01 -0.0801 0.0861 0.669 CD4_TCM L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 3.93e-02 0.209 0.101 0.669 CD4_TCM L2
ENSG00000079739 PGM1 -519377 sc-eQTL 3.37e-01 -0.101 0.105 0.669 CD4_TEM L2
ENSG00000088035 ALG6 -293541 sc-eQTL 9.79e-01 -0.00282 0.106 0.669 CD4_TEM L2
ENSG00000116641 DOCK7 385648 sc-eQTL 2.51e-01 0.119 0.103 0.669 CD4_TEM L2
ENSG00000125703 ATG4C 289902 sc-eQTL 1.98e-01 0.129 0.1 0.669 CD4_TEM L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.76e-02 0.189 0.103 0.669 CD4_TEM L2
ENSG00000162607 USP1 637737 sc-eQTL 2.96e-01 0.103 0.0979 0.669 CD4_TEM L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 5.43e-01 0.0653 0.107 0.669 CD4_TEM L2
ENSG00000079739 PGM1 -519377 sc-eQTL 3.14e-01 0.0969 0.0959 0.669 CD8_CTL L2
ENSG00000088035 ALG6 -293541 sc-eQTL 5.80e-01 -0.0566 0.102 0.669 CD8_CTL L2
ENSG00000116641 DOCK7 385648 sc-eQTL 6.19e-01 0.0482 0.097 0.669 CD8_CTL L2
ENSG00000125703 ATG4C 289902 sc-eQTL 5.49e-01 0.062 0.103 0.669 CD8_CTL L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 9.99e-01 0.0002 0.107 0.669 CD8_CTL L2
ENSG00000162607 USP1 637737 sc-eQTL 5.08e-02 0.187 0.0953 0.669 CD8_CTL L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 4.91e-01 0.0758 0.11 0.669 CD8_CTL L2
ENSG00000079739 PGM1 -519377 sc-eQTL 2.14e-02 0.219 0.0946 0.669 CD8_Naive L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.42e-01 0.116 0.0989 0.669 CD8_Naive L2
ENSG00000116641 DOCK7 385648 sc-eQTL 9.75e-03 0.263 0.101 0.669 CD8_Naive L2
ENSG00000125703 ATG4C 289902 sc-eQTL 1.27e-01 0.15 0.0979 0.669 CD8_Naive L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.89e-01 0.0399 0.0996 0.669 CD8_Naive L2
ENSG00000162607 USP1 637737 sc-eQTL 2.59e-01 0.0951 0.084 0.669 CD8_Naive L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 6.57e-02 0.172 0.0932 0.669 CD8_Naive L2
ENSG00000079739 PGM1 -519377 sc-eQTL 9.07e-01 0.0124 0.107 0.667 CD8_TCM L2
ENSG00000088035 ALG6 -293541 sc-eQTL 8.85e-01 -0.0156 0.108 0.667 CD8_TCM L2
ENSG00000116641 DOCK7 385648 sc-eQTL 5.95e-01 0.0561 0.105 0.667 CD8_TCM L2
ENSG00000125703 ATG4C 289902 sc-eQTL 4.30e-01 -0.0852 0.108 0.667 CD8_TCM L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 7.84e-01 0.0287 0.105 0.667 CD8_TCM L2
ENSG00000162607 USP1 637737 sc-eQTL 6.83e-01 0.0412 0.101 0.667 CD8_TCM L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 3.14e-01 0.108 0.106 0.667 CD8_TCM L2
ENSG00000079739 PGM1 -519377 sc-eQTL 6.57e-01 0.0477 0.107 0.664 CD8_TEM L2
ENSG00000088035 ALG6 -293541 sc-eQTL 1.80e-01 -0.144 0.107 0.664 CD8_TEM L2
ENSG00000116641 DOCK7 385648 sc-eQTL 3.26e-01 -0.103 0.104 0.664 CD8_TEM L2
ENSG00000125703 ATG4C 289902 sc-eQTL 1.01e-01 -0.165 0.0999 0.664 CD8_TEM L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.22e-01 0.0245 0.109 0.664 CD8_TEM L2
ENSG00000162607 USP1 637737 sc-eQTL 9.90e-01 0.00128 0.104 0.664 CD8_TEM L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.18e-01 0.165 0.105 0.664 CD8_TEM L2
ENSG00000079739 PGM1 -519377 sc-eQTL 9.41e-01 0.00744 0.101 0.665 MAIT L2
ENSG00000088035 ALG6 -293541 sc-eQTL 1.93e-02 0.233 0.0986 0.665 MAIT L2
ENSG00000116641 DOCK7 385648 sc-eQTL 1.05e-01 0.155 0.0952 0.665 MAIT L2
ENSG00000125703 ATG4C 289902 sc-eQTL 4.97e-02 0.198 0.1 0.665 MAIT L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.96e-01 -0.0396 0.101 0.665 MAIT L2
ENSG00000162607 USP1 637737 sc-eQTL 8.24e-01 0.0223 0.1 0.665 MAIT L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 5.43e-01 -0.0634 0.104 0.665 MAIT L2
ENSG00000079739 PGM1 -519377 sc-eQTL 1.52e-01 0.148 0.103 0.669 NK_CD56bright L2
ENSG00000088035 ALG6 -293541 sc-eQTL 6.03e-01 -0.0552 0.106 0.669 NK_CD56bright L2
ENSG00000116641 DOCK7 385648 sc-eQTL 8.00e-01 0.0233 0.092 0.669 NK_CD56bright L2
ENSG00000125703 ATG4C 289902 sc-eQTL 5.76e-01 0.0576 0.103 0.669 NK_CD56bright L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 9.16e-01 -0.0113 0.107 0.669 NK_CD56bright L2
ENSG00000162607 USP1 637737 sc-eQTL 5.27e-01 -0.0699 0.11 0.669 NK_CD56bright L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 3.31e-01 -0.103 0.105 0.669 NK_CD56bright L2
ENSG00000079739 PGM1 -519377 sc-eQTL 6.76e-01 0.0337 0.0807 0.668 NK_CD56dim L2
ENSG00000088035 ALG6 -293541 sc-eQTL 7.31e-01 -0.0352 0.102 0.668 NK_CD56dim L2
ENSG00000116641 DOCK7 385648 sc-eQTL 5.49e-01 0.0535 0.089 0.668 NK_CD56dim L2
ENSG00000125703 ATG4C 289902 sc-eQTL 3.30e-01 -0.0882 0.0903 0.668 NK_CD56dim L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.46e-02 0.177 0.102 0.668 NK_CD56dim L2
ENSG00000162607 USP1 637737 sc-eQTL 9.42e-01 0.00732 0.0999 0.668 NK_CD56dim L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.35e-01 -0.166 0.111 0.668 NK_CD56dim L2
ENSG00000079739 PGM1 -519377 sc-eQTL 1.96e-01 0.145 0.112 0.664 NK_HLA L2
ENSG00000088035 ALG6 -293541 sc-eQTL 1.50e-01 0.167 0.116 0.664 NK_HLA L2
ENSG00000116641 DOCK7 385648 sc-eQTL 1.18e-01 -0.139 0.0885 0.664 NK_HLA L2
ENSG00000125703 ATG4C 289902 sc-eQTL 5.31e-01 -0.0649 0.103 0.664 NK_HLA L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.22e-01 0.0536 0.109 0.664 NK_HLA L2
ENSG00000162607 USP1 637737 sc-eQTL 3.62e-01 -0.104 0.114 0.664 NK_HLA L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.42e-01 -0.152 0.103 0.664 NK_HLA L2
ENSG00000079739 PGM1 -519377 sc-eQTL 6.19e-01 -0.0443 0.0889 0.668 NK_cytokine L2
ENSG00000088035 ALG6 -293541 sc-eQTL 5.93e-01 0.0538 0.1 0.668 NK_cytokine L2
ENSG00000116641 DOCK7 385648 sc-eQTL 3.88e-02 0.192 0.0922 0.668 NK_cytokine L2
ENSG00000125703 ATG4C 289902 sc-eQTL 1.97e-01 0.123 0.0949 0.668 NK_cytokine L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 1.17e-01 0.155 0.0981 0.668 NK_cytokine L2
ENSG00000162607 USP1 637737 sc-eQTL 4.23e-01 0.0831 0.104 0.668 NK_cytokine L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.73e-01 -0.143 0.105 0.668 NK_cytokine L2
ENSG00000079739 PGM1 -519377 sc-eQTL 3.92e-01 0.105 0.123 0.667 PB L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.74e-01 -0.141 0.129 0.667 PB L2
ENSG00000116641 DOCK7 385648 sc-eQTL 8.00e-01 -0.035 0.138 0.667 PB L2
ENSG00000125703 ATG4C 289902 sc-eQTL 2.09e-01 0.151 0.12 0.667 PB L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 2.00e-01 -0.154 0.12 0.667 PB L2
ENSG00000162607 USP1 637737 sc-eQTL 7.82e-01 -0.0332 0.12 0.667 PB L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.66e-02 0.313 0.129 0.667 PB L2
ENSG00000079739 PGM1 -519377 sc-eQTL 6.07e-01 0.0493 0.0958 0.667 Pro_T L2
ENSG00000088035 ALG6 -293541 sc-eQTL 5.75e-01 -0.0547 0.0974 0.667 Pro_T L2
ENSG00000116641 DOCK7 385648 sc-eQTL 6.06e-03 -0.266 0.0961 0.667 Pro_T L2
ENSG00000125703 ATG4C 289902 sc-eQTL 2.27e-01 -0.103 0.0854 0.667 Pro_T L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.65e-02 0.157 0.0852 0.667 Pro_T L2
ENSG00000162607 USP1 637737 sc-eQTL 1.43e-01 0.0864 0.0588 0.667 Pro_T L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 4.42e-01 -0.0768 0.0997 0.667 Pro_T L2
ENSG00000079739 PGM1 -519377 sc-eQTL 1.42e-01 0.148 0.1 0.669 Treg L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.63e-01 0.12 0.107 0.669 Treg L2
ENSG00000116641 DOCK7 385648 sc-eQTL 6.29e-01 0.0478 0.0988 0.669 Treg L2
ENSG00000125703 ATG4C 289902 sc-eQTL 3.56e-01 0.0932 0.101 0.669 Treg L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.44e-01 -0.0208 0.106 0.669 Treg L2
ENSG00000162607 USP1 637737 sc-eQTL 2.38e-01 0.12 0.102 0.669 Treg L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 1.03e-02 -0.258 0.0995 0.669 Treg L2
ENSG00000079739 PGM1 -519377 sc-eQTL 1.10e-01 0.159 0.0991 0.663 cDC L2
ENSG00000088035 ALG6 -293541 sc-eQTL 9.14e-01 -0.0109 0.101 0.663 cDC L2
ENSG00000116641 DOCK7 385648 sc-eQTL 9.99e-01 0.00015 0.0993 0.663 cDC L2
ENSG00000125703 ATG4C 289902 sc-eQTL 7.46e-01 0.028 0.0862 0.663 cDC L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 4.04e-01 0.0912 0.109 0.663 cDC L2
ENSG00000162607 USP1 637737 sc-eQTL 3.51e-01 -0.0907 0.0971 0.663 cDC L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 4.56e-01 0.0655 0.0877 0.663 cDC L2
ENSG00000079739 PGM1 -519377 sc-eQTL 1.17e-02 0.239 0.094 0.669 cMono_IL1B L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.57e-01 0.108 0.0953 0.669 cMono_IL1B L2
ENSG00000116641 DOCK7 385648 sc-eQTL 7.70e-01 -0.0295 0.101 0.669 cMono_IL1B L2
ENSG00000125703 ATG4C 289902 sc-eQTL 4.46e-01 0.054 0.0708 0.669 cMono_IL1B L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.89e-01 -0.0141 0.1 0.669 cMono_IL1B L2
ENSG00000162607 USP1 637737 sc-eQTL 8.73e-01 0.0141 0.0885 0.669 cMono_IL1B L2
ENSG00000240563 L1TD1 879185 sc-eQTL 8.38e-02 -0.153 0.0883 0.669 cMono_IL1B L2
ENSG00000079739 PGM1 -519377 sc-eQTL 3.17e-01 0.105 0.104 0.669 cMono_S100A L2
ENSG00000088035 ALG6 -293541 sc-eQTL 1.00e-01 0.174 0.105 0.669 cMono_S100A L2
ENSG00000116641 DOCK7 385648 sc-eQTL 7.95e-01 0.0256 0.0982 0.669 cMono_S100A L2
ENSG00000125703 ATG4C 289902 sc-eQTL 4.17e-01 0.069 0.0849 0.669 cMono_S100A L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.48e-01 -0.0438 0.0959 0.669 cMono_S100A L2
ENSG00000162607 USP1 637737 sc-eQTL 9.83e-01 0.00212 0.0987 0.669 cMono_S100A L2
ENSG00000240563 L1TD1 879185 sc-eQTL 1.68e-01 -0.113 0.0818 0.669 cMono_S100A L2
ENSG00000079739 PGM1 -519377 sc-eQTL 4.89e-01 0.0838 0.121 0.661 gdT L2
ENSG00000088035 ALG6 -293541 sc-eQTL 8.72e-01 0.0209 0.129 0.661 gdT L2
ENSG00000116641 DOCK7 385648 sc-eQTL 7.75e-01 0.0362 0.126 0.661 gdT L2
ENSG00000125703 ATG4C 289902 sc-eQTL 7.88e-01 0.0325 0.121 0.661 gdT L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 3.56e-01 0.118 0.128 0.661 gdT L2
ENSG00000162607 USP1 637737 sc-eQTL 3.21e-01 0.12 0.121 0.661 gdT L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 3.51e-02 -0.264 0.124 0.661 gdT L2
ENSG00000079739 PGM1 -519377 sc-eQTL 5.20e-02 0.204 0.104 0.669 intMono L2
ENSG00000088035 ALG6 -293541 sc-eQTL 2.15e-01 -0.122 0.0977 0.669 intMono L2
ENSG00000116641 DOCK7 385648 sc-eQTL 7.45e-01 -0.0326 0.1 0.669 intMono L2
ENSG00000125703 ATG4C 289902 sc-eQTL 1.57e-02 -0.23 0.0943 0.669 intMono L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 2.86e-01 -0.112 0.105 0.669 intMono L2
ENSG00000162607 USP1 637737 sc-eQTL 7.64e-02 -0.189 0.106 0.669 intMono L2
ENSG00000240563 L1TD1 879185 sc-eQTL 6.54e-01 -0.0353 0.0788 0.669 intMono L2
ENSG00000079739 PGM1 -519377 sc-eQTL 6.81e-01 -0.0404 0.0984 0.67 ncMono L2
ENSG00000088035 ALG6 -293541 sc-eQTL 7.64e-01 0.0325 0.108 0.67 ncMono L2
ENSG00000116641 DOCK7 385648 sc-eQTL 7.21e-01 0.038 0.106 0.67 ncMono L2
ENSG00000125703 ATG4C 289902 sc-eQTL 3.70e-01 -0.0892 0.0992 0.67 ncMono L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 9.27e-01 0.00948 0.104 0.67 ncMono L2
ENSG00000162607 USP1 637737 sc-eQTL 2.73e-02 -0.233 0.105 0.67 ncMono L2
ENSG00000240563 L1TD1 879185 sc-eQTL 6.87e-01 0.0304 0.0753 0.67 ncMono L2
ENSG00000079739 PGM1 -519377 sc-eQTL 1.82e-01 0.146 0.109 0.638 pDC L2
ENSG00000088035 ALG6 -293541 sc-eQTL 1.64e-01 0.148 0.106 0.638 pDC L2
ENSG00000116641 DOCK7 385648 sc-eQTL 1.50e-02 -0.263 0.107 0.638 pDC L2
ENSG00000125703 ATG4C 289902 sc-eQTL 7.73e-01 0.0282 0.0978 0.638 pDC L2
ENSG00000142856 ITGB3BP -519687 sc-eQTL 9.84e-01 -0.00225 0.11 0.638 pDC L2
ENSG00000162607 USP1 637737 sc-eQTL 4.00e-01 0.0943 0.112 0.638 pDC L2
ENSG00000203965 EFCAB7 -449338 sc-eQTL 7.95e-01 0.0253 0.0972 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -519377 sc-eQTL 4.81e-01 0.0684 0.0969 0.669 B_Memory LOneK1K
ENSG00000088035 ALG6 -293541 sc-eQTL 3.04e-01 -0.11 0.107 0.669 B_Memory LOneK1K
ENSG00000116641 DOCK7 385648 sc-eQTL 6.42e-01 0.0433 0.093 0.669 B_Memory LOneK1K
ENSG00000125703 ATG4C 289902 sc-eQTL 6.57e-01 0.0335 0.0752 0.669 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -519687 sc-eQTL 4.96e-01 -0.0673 0.0988 0.669 B_Memory LOneK1K
ENSG00000162607 USP1 637737 sc-eQTL 8.21e-01 -0.0218 0.096 0.669 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -449338 sc-eQTL 8.94e-02 -0.175 0.102 0.669 B_Memory LOneK1K
ENSG00000079739 PGM1 -519377 sc-eQTL 1.43e-01 0.149 0.101 0.669 B_Naive LOneK1K
ENSG00000088035 ALG6 -293541 sc-eQTL 9.82e-01 -0.00239 0.105 0.669 B_Naive LOneK1K
ENSG00000116641 DOCK7 385648 sc-eQTL 4.58e-01 0.0727 0.0977 0.669 B_Naive LOneK1K
ENSG00000125703 ATG4C 289902 sc-eQTL 4.45e-01 0.057 0.0745 0.669 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.78e-01 0.0163 0.106 0.669 B_Naive LOneK1K
ENSG00000162607 USP1 637737 sc-eQTL 1.82e-01 0.121 0.0903 0.669 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -449338 sc-eQTL 2.15e-01 0.132 0.106 0.669 B_Naive LOneK1K
ENSG00000079739 PGM1 -519377 sc-eQTL 1.51e-02 0.235 0.0957 0.669 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -293541 sc-eQTL 1.44e-01 0.137 0.0935 0.669 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 385648 sc-eQTL 8.58e-01 0.0169 0.0946 0.669 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 289902 sc-eQTL 2.25e-01 0.0794 0.0652 0.669 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -519687 sc-eQTL 8.50e-01 -0.0183 0.0968 0.669 CD14_Mono LOneK1K
ENSG00000162607 USP1 637737 sc-eQTL 9.11e-01 -0.00922 0.0827 0.669 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 879185 sc-eQTL 1.75e-01 -0.121 0.0892 0.669 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -519377 sc-eQTL 7.27e-01 0.0325 0.0929 0.67 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -293541 sc-eQTL 7.98e-01 -0.027 0.105 0.67 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 385648 sc-eQTL 6.50e-01 -0.0474 0.104 0.67 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 289902 sc-eQTL 1.44e-01 -0.13 0.0885 0.67 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -519687 sc-eQTL 6.01e-01 -0.0541 0.103 0.67 CD16_Mono LOneK1K
ENSG00000162607 USP1 637737 sc-eQTL 4.84e-03 -0.271 0.0953 0.67 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 879185 sc-eQTL 7.30e-01 0.0228 0.0662 0.67 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -519377 sc-eQTL 8.20e-01 0.0181 0.0792 0.668 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -293541 sc-eQTL 5.97e-01 0.0504 0.0951 0.668 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 385648 sc-eQTL 2.26e-01 0.103 0.085 0.668 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 289902 sc-eQTL 8.09e-01 0.0206 0.0851 0.668 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -519687 sc-eQTL 7.28e-02 0.18 0.1 0.668 NK_CD56dim LOneK1K
ENSG00000162607 USP1 637737 sc-eQTL 8.35e-01 -0.0191 0.0915 0.668 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -449338 sc-eQTL 3.15e-02 -0.239 0.11 0.668 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000240563 L1TD1 879185 eQTL 0.039 0.0849 0.0411 0.0 0.0 0.316

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina