logo

Genes within 1Mb (chr1:63063402:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -530009 sc-eQTL 5.29e-01 0.0483 0.0767 0.498 B L1
ENSG00000088035 ALG6 -304173 sc-eQTL 3.55e-01 -0.0736 0.0794 0.498 B L1
ENSG00000116641 DOCK7 375016 sc-eQTL 9.10e-01 -0.00903 0.0795 0.498 B L1
ENSG00000125703 ATG4C 279270 sc-eQTL 3.48e-01 0.0519 0.0552 0.498 B L1
ENSG00000142856 ITGB3BP -530319 sc-eQTL 3.32e-01 0.0853 0.0878 0.498 B L1
ENSG00000162607 USP1 627105 sc-eQTL 8.55e-01 0.0139 0.0763 0.498 B L1
ENSG00000203965 EFCAB7 -459970 sc-eQTL 3.02e-02 0.194 0.0891 0.498 B L1
ENSG00000079739 PGM1 -530009 sc-eQTL 2.35e-01 -0.0775 0.0651 0.498 CD4T L1
ENSG00000088035 ALG6 -304173 sc-eQTL 3.06e-01 0.0737 0.0719 0.498 CD4T L1
ENSG00000116641 DOCK7 375016 sc-eQTL 9.34e-01 -0.00603 0.0729 0.498 CD4T L1
ENSG00000125703 ATG4C 279270 sc-eQTL 6.54e-01 0.0264 0.0589 0.498 CD4T L1
ENSG00000142856 ITGB3BP -530319 sc-eQTL 3.19e-02 0.179 0.0827 0.498 CD4T L1
ENSG00000162607 USP1 627105 sc-eQTL 4.04e-01 0.0477 0.057 0.498 CD4T L1
ENSG00000203965 EFCAB7 -459970 sc-eQTL 1.22e-01 0.116 0.0746 0.498 CD4T L1
ENSG00000079739 PGM1 -530009 sc-eQTL 4.95e-02 0.143 0.0725 0.498 CD8T L1
ENSG00000088035 ALG6 -304173 sc-eQTL 5.13e-01 -0.0528 0.0806 0.498 CD8T L1
ENSG00000116641 DOCK7 375016 sc-eQTL 9.29e-01 0.00732 0.0817 0.498 CD8T L1
ENSG00000125703 ATG4C 279270 sc-eQTL 4.49e-01 0.0588 0.0775 0.498 CD8T L1
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.11e-01 0.138 0.0863 0.498 CD8T L1
ENSG00000162607 USP1 627105 sc-eQTL 7.75e-01 -0.0193 0.0676 0.498 CD8T L1
ENSG00000203965 EFCAB7 -459970 sc-eQTL 1.98e-02 0.201 0.0854 0.498 CD8T L1
ENSG00000079739 PGM1 -530009 sc-eQTL 7.57e-01 -0.0257 0.083 0.502 DC L1
ENSG00000088035 ALG6 -304173 sc-eQTL 6.61e-01 0.0376 0.0856 0.502 DC L1
ENSG00000116641 DOCK7 375016 sc-eQTL 4.01e-01 -0.0737 0.0876 0.502 DC L1
ENSG00000125703 ATG4C 279270 sc-eQTL 1.43e-02 -0.167 0.0677 0.502 DC L1
ENSG00000142856 ITGB3BP -530319 sc-eQTL 2.11e-02 0.22 0.0948 0.502 DC L1
ENSG00000162607 USP1 627105 sc-eQTL 5.78e-01 -0.0467 0.0838 0.502 DC L1
ENSG00000203965 EFCAB7 -459970 sc-eQTL 3.60e-01 -0.0766 0.0834 0.502 DC L1
ENSG00000079739 PGM1 -530009 sc-eQTL 1.82e-01 0.105 0.0785 0.498 Mono L1
ENSG00000088035 ALG6 -304173 sc-eQTL 4.57e-01 0.0612 0.0821 0.498 Mono L1
ENSG00000116641 DOCK7 375016 sc-eQTL 1.63e-01 0.111 0.0792 0.498 Mono L1
ENSG00000125703 ATG4C 279270 sc-eQTL 9.03e-01 0.00654 0.0537 0.498 Mono L1
ENSG00000142856 ITGB3BP -530319 sc-eQTL 7.00e-01 0.0327 0.0849 0.498 Mono L1
ENSG00000162607 USP1 627105 sc-eQTL 5.74e-01 -0.0393 0.0697 0.498 Mono L1
ENSG00000240563 L1TD1 868553 sc-eQTL 5.93e-02 -0.122 0.0646 0.498 Mono L1
ENSG00000079739 PGM1 -530009 sc-eQTL 8.02e-01 -0.0171 0.0682 0.5 NK L1
ENSG00000088035 ALG6 -304173 sc-eQTL 4.18e-01 -0.0647 0.0798 0.5 NK L1
ENSG00000116641 DOCK7 375016 sc-eQTL 6.57e-01 0.0292 0.0658 0.5 NK L1
ENSG00000125703 ATG4C 279270 sc-eQTL 8.87e-01 0.01 0.0707 0.5 NK L1
ENSG00000142856 ITGB3BP -530319 sc-eQTL 5.45e-02 0.168 0.0871 0.5 NK L1
ENSG00000162607 USP1 627105 sc-eQTL 4.43e-01 -0.0603 0.0784 0.5 NK L1
ENSG00000203965 EFCAB7 -459970 sc-eQTL 2.40e-01 -0.112 0.0951 0.5 NK L1
ENSG00000079739 PGM1 -530009 sc-eQTL 3.28e-01 0.0749 0.0764 0.498 Other_T L1
ENSG00000088035 ALG6 -304173 sc-eQTL 6.71e-01 0.0327 0.0769 0.498 Other_T L1
ENSG00000116641 DOCK7 375016 sc-eQTL 9.93e-01 0.000661 0.0786 0.498 Other_T L1
ENSG00000125703 ATG4C 279270 sc-eQTL 9.26e-01 0.00635 0.068 0.498 Other_T L1
ENSG00000142856 ITGB3BP -530319 sc-eQTL 3.19e-01 0.0601 0.0602 0.498 Other_T L1
ENSG00000162607 USP1 627105 sc-eQTL 3.11e-01 -0.0529 0.0522 0.498 Other_T L1
ENSG00000203965 EFCAB7 -459970 sc-eQTL 4.56e-01 0.0694 0.093 0.498 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -530009 sc-eQTL 4.61e-01 0.0733 0.0992 0.49 B_Activated L2
ENSG00000088035 ALG6 -304173 sc-eQTL 8.39e-01 -0.0194 0.0952 0.49 B_Activated L2
ENSG00000116641 DOCK7 375016 sc-eQTL 9.14e-01 0.00963 0.0886 0.49 B_Activated L2
ENSG00000125703 ATG4C 279270 sc-eQTL 8.72e-01 -0.015 0.0932 0.49 B_Activated L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 8.54e-01 0.0168 0.0911 0.49 B_Activated L2
ENSG00000162607 USP1 627105 sc-eQTL 9.83e-01 0.00214 0.0987 0.49 B_Activated L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 4.47e-01 0.0657 0.0861 0.49 B_Activated L2
ENSG00000079739 PGM1 -530009 sc-eQTL 9.02e-01 -0.0113 0.092 0.496 B_Intermediate L2
ENSG00000088035 ALG6 -304173 sc-eQTL 2.49e-01 -0.108 0.0932 0.496 B_Intermediate L2
ENSG00000116641 DOCK7 375016 sc-eQTL 8.37e-01 0.0184 0.0893 0.496 B_Intermediate L2
ENSG00000125703 ATG4C 279270 sc-eQTL 3.62e-01 0.069 0.0755 0.496 B_Intermediate L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 8.45e-01 0.0176 0.0901 0.496 B_Intermediate L2
ENSG00000162607 USP1 627105 sc-eQTL 2.19e-01 -0.11 0.0896 0.496 B_Intermediate L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 9.91e-01 -0.00104 0.0892 0.496 B_Intermediate L2
ENSG00000079739 PGM1 -530009 sc-eQTL 3.90e-01 -0.0771 0.0895 0.498 B_Memory L2
ENSG00000088035 ALG6 -304173 sc-eQTL 4.09e-01 -0.0753 0.091 0.498 B_Memory L2
ENSG00000116641 DOCK7 375016 sc-eQTL 2.07e-01 -0.108 0.0852 0.498 B_Memory L2
ENSG00000125703 ATG4C 279270 sc-eQTL 5.78e-01 -0.0453 0.0812 0.498 B_Memory L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 6.30e-01 -0.0448 0.0929 0.498 B_Memory L2
ENSG00000162607 USP1 627105 sc-eQTL 1.18e-02 0.235 0.0924 0.498 B_Memory L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 1.49e-01 -0.133 0.0918 0.498 B_Memory L2
ENSG00000079739 PGM1 -530009 sc-eQTL 1.55e-01 0.13 0.0911 0.498 B_Naive1 L2
ENSG00000088035 ALG6 -304173 sc-eQTL 5.17e-01 0.0597 0.0918 0.498 B_Naive1 L2
ENSG00000116641 DOCK7 375016 sc-eQTL 9.43e-01 0.00632 0.0881 0.498 B_Naive1 L2
ENSG00000125703 ATG4C 279270 sc-eQTL 5.64e-01 0.0392 0.0678 0.498 B_Naive1 L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 8.06e-02 0.157 0.0894 0.498 B_Naive1 L2
ENSG00000162607 USP1 627105 sc-eQTL 6.62e-01 0.0346 0.0791 0.498 B_Naive1 L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 6.19e-02 0.179 0.0952 0.498 B_Naive1 L2
ENSG00000079739 PGM1 -530009 sc-eQTL 7.85e-01 -0.0248 0.0908 0.496 B_Naive2 L2
ENSG00000088035 ALG6 -304173 sc-eQTL 8.58e-01 0.017 0.0946 0.496 B_Naive2 L2
ENSG00000116641 DOCK7 375016 sc-eQTL 1.94e-01 -0.118 0.0907 0.496 B_Naive2 L2
ENSG00000125703 ATG4C 279270 sc-eQTL 7.51e-01 0.0278 0.0876 0.496 B_Naive2 L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 9.86e-01 0.00165 0.095 0.496 B_Naive2 L2
ENSG00000162607 USP1 627105 sc-eQTL 9.40e-01 0.00679 0.0904 0.496 B_Naive2 L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 1.07e-01 0.152 0.094 0.496 B_Naive2 L2
ENSG00000079739 PGM1 -530009 sc-eQTL 2.83e-01 -0.0982 0.0912 0.495 CD4_CTL L2
ENSG00000088035 ALG6 -304173 sc-eQTL 5.19e-02 0.187 0.0958 0.495 CD4_CTL L2
ENSG00000116641 DOCK7 375016 sc-eQTL 4.23e-01 0.0678 0.0844 0.495 CD4_CTL L2
ENSG00000125703 ATG4C 279270 sc-eQTL 5.15e-02 0.17 0.0866 0.495 CD4_CTL L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 7.17e-01 -0.0339 0.0935 0.495 CD4_CTL L2
ENSG00000162607 USP1 627105 sc-eQTL 9.30e-01 -0.00786 0.089 0.495 CD4_CTL L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 4.02e-01 -0.0745 0.0887 0.495 CD4_CTL L2
ENSG00000079739 PGM1 -530009 sc-eQTL 5.94e-01 -0.0394 0.0737 0.498 CD4_Naive L2
ENSG00000088035 ALG6 -304173 sc-eQTL 4.03e-01 0.0671 0.08 0.498 CD4_Naive L2
ENSG00000116641 DOCK7 375016 sc-eQTL 3.48e-01 0.0739 0.0786 0.498 CD4_Naive L2
ENSG00000125703 ATG4C 279270 sc-eQTL 9.77e-01 -0.00197 0.0696 0.498 CD4_Naive L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 4.12e-02 0.173 0.0843 0.498 CD4_Naive L2
ENSG00000162607 USP1 627105 sc-eQTL 7.41e-01 0.0215 0.065 0.498 CD4_Naive L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 6.89e-02 0.153 0.0838 0.498 CD4_Naive L2
ENSG00000079739 PGM1 -530009 sc-eQTL 5.34e-01 0.0476 0.0766 0.498 CD4_TCM L2
ENSG00000088035 ALG6 -304173 sc-eQTL 5.69e-01 -0.0508 0.0889 0.498 CD4_TCM L2
ENSG00000116641 DOCK7 375016 sc-eQTL 4.70e-01 -0.057 0.0788 0.498 CD4_TCM L2
ENSG00000125703 ATG4C 279270 sc-eQTL 1.16e-01 0.12 0.0763 0.498 CD4_TCM L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.47e-01 0.131 0.09 0.498 CD4_TCM L2
ENSG00000162607 USP1 627105 sc-eQTL 5.72e-01 -0.042 0.0741 0.498 CD4_TCM L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 4.01e-01 0.0736 0.0874 0.498 CD4_TCM L2
ENSG00000079739 PGM1 -530009 sc-eQTL 6.66e-03 -0.246 0.0899 0.498 CD4_TEM L2
ENSG00000088035 ALG6 -304173 sc-eQTL 5.49e-01 0.0552 0.0918 0.498 CD4_TEM L2
ENSG00000116641 DOCK7 375016 sc-eQTL 7.83e-01 -0.0247 0.0896 0.498 CD4_TEM L2
ENSG00000125703 ATG4C 279270 sc-eQTL 6.64e-01 -0.0379 0.087 0.498 CD4_TEM L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 6.42e-02 0.166 0.0891 0.498 CD4_TEM L2
ENSG00000162607 USP1 627105 sc-eQTL 1.69e-02 0.202 0.084 0.498 CD4_TEM L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 9.91e-01 0.00108 0.0931 0.498 CD4_TEM L2
ENSG00000079739 PGM1 -530009 sc-eQTL 3.10e-01 0.0852 0.0837 0.498 CD8_CTL L2
ENSG00000088035 ALG6 -304173 sc-eQTL 9.89e-01 0.00118 0.0892 0.498 CD8_CTL L2
ENSG00000116641 DOCK7 375016 sc-eQTL 8.74e-01 0.0135 0.0846 0.498 CD8_CTL L2
ENSG00000125703 ATG4C 279270 sc-eQTL 6.66e-02 0.165 0.0894 0.498 CD8_CTL L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.00e-01 0.154 0.0931 0.498 CD8_CTL L2
ENSG00000162607 USP1 627105 sc-eQTL 6.67e-01 0.0361 0.0839 0.498 CD8_CTL L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 8.45e-02 0.165 0.0953 0.498 CD8_CTL L2
ENSG00000079739 PGM1 -530009 sc-eQTL 2.51e-02 0.185 0.0821 0.498 CD8_Naive L2
ENSG00000088035 ALG6 -304173 sc-eQTL 7.97e-01 0.0221 0.086 0.498 CD8_Naive L2
ENSG00000116641 DOCK7 375016 sc-eQTL 2.13e-01 0.111 0.0885 0.498 CD8_Naive L2
ENSG00000125703 ATG4C 279270 sc-eQTL 1.11e-01 0.136 0.0848 0.498 CD8_Naive L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 2.70e-01 0.0953 0.0862 0.498 CD8_Naive L2
ENSG00000162607 USP1 627105 sc-eQTL 5.63e-01 0.0423 0.073 0.498 CD8_Naive L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 4.80e-01 0.0575 0.0814 0.498 CD8_Naive L2
ENSG00000079739 PGM1 -530009 sc-eQTL 9.65e-01 0.00401 0.092 0.495 CD8_TCM L2
ENSG00000088035 ALG6 -304173 sc-eQTL 3.89e-01 -0.0803 0.093 0.495 CD8_TCM L2
ENSG00000116641 DOCK7 375016 sc-eQTL 9.49e-01 0.00577 0.0909 0.495 CD8_TCM L2
ENSG00000125703 ATG4C 279270 sc-eQTL 8.04e-01 0.0232 0.093 0.495 CD8_TCM L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 9.49e-01 -0.00574 0.0904 0.495 CD8_TCM L2
ENSG00000162607 USP1 627105 sc-eQTL 6.07e-01 -0.0447 0.0869 0.495 CD8_TCM L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 1.01e-01 0.151 0.0915 0.495 CD8_TCM L2
ENSG00000079739 PGM1 -530009 sc-eQTL 3.67e-02 0.193 0.0915 0.493 CD8_TEM L2
ENSG00000088035 ALG6 -304173 sc-eQTL 5.18e-01 -0.0601 0.0928 0.493 CD8_TEM L2
ENSG00000116641 DOCK7 375016 sc-eQTL 9.28e-01 0.00816 0.09 0.493 CD8_TEM L2
ENSG00000125703 ATG4C 279270 sc-eQTL 4.01e-03 -0.247 0.0848 0.493 CD8_TEM L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 2.19e-01 0.115 0.0933 0.493 CD8_TEM L2
ENSG00000162607 USP1 627105 sc-eQTL 8.87e-01 0.0127 0.0894 0.493 CD8_TEM L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 3.29e-02 0.193 0.0898 0.493 CD8_TEM L2
ENSG00000079739 PGM1 -530009 sc-eQTL 9.21e-01 0.00892 0.0897 0.5 MAIT L2
ENSG00000088035 ALG6 -304173 sc-eQTL 2.27e-01 0.107 0.0885 0.5 MAIT L2
ENSG00000116641 DOCK7 375016 sc-eQTL 5.57e-02 0.162 0.0843 0.5 MAIT L2
ENSG00000125703 ATG4C 279270 sc-eQTL 1.98e-01 0.115 0.0894 0.5 MAIT L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 9.38e-01 0.00705 0.0899 0.5 MAIT L2
ENSG00000162607 USP1 627105 sc-eQTL 8.58e-01 -0.0159 0.0892 0.5 MAIT L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 6.22e-01 0.0457 0.0925 0.5 MAIT L2
ENSG00000079739 PGM1 -530009 sc-eQTL 8.80e-01 0.0135 0.089 0.502 NK_CD56bright L2
ENSG00000088035 ALG6 -304173 sc-eQTL 6.33e-01 -0.0436 0.0912 0.502 NK_CD56bright L2
ENSG00000116641 DOCK7 375016 sc-eQTL 3.06e-01 -0.0809 0.0788 0.502 NK_CD56bright L2
ENSG00000125703 ATG4C 279270 sc-eQTL 3.04e-01 -0.0908 0.0881 0.502 NK_CD56bright L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 2.63e-01 0.103 0.0916 0.502 NK_CD56bright L2
ENSG00000162607 USP1 627105 sc-eQTL 9.05e-02 -0.16 0.0941 0.502 NK_CD56bright L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 6.67e-01 -0.0391 0.0906 0.502 NK_CD56bright L2
ENSG00000079739 PGM1 -530009 sc-eQTL 5.59e-01 -0.0408 0.0698 0.498 NK_CD56dim L2
ENSG00000088035 ALG6 -304173 sc-eQTL 6.77e-01 0.037 0.0886 0.498 NK_CD56dim L2
ENSG00000116641 DOCK7 375016 sc-eQTL 8.37e-01 0.0158 0.0771 0.498 NK_CD56dim L2
ENSG00000125703 ATG4C 279270 sc-eQTL 6.84e-01 -0.0319 0.0783 0.498 NK_CD56dim L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.26e-01 0.136 0.0886 0.498 NK_CD56dim L2
ENSG00000162607 USP1 627105 sc-eQTL 1.88e-01 -0.114 0.0861 0.498 NK_CD56dim L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 3.30e-01 -0.0938 0.0961 0.498 NK_CD56dim L2
ENSG00000079739 PGM1 -530009 sc-eQTL 4.88e-01 0.0678 0.0975 0.498 NK_HLA L2
ENSG00000088035 ALG6 -304173 sc-eQTL 2.54e-01 -0.115 0.101 0.498 NK_HLA L2
ENSG00000116641 DOCK7 375016 sc-eQTL 3.88e-02 -0.159 0.0766 0.498 NK_HLA L2
ENSG00000125703 ATG4C 279270 sc-eQTL 8.39e-01 -0.0184 0.09 0.498 NK_HLA L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 7.66e-01 0.0282 0.0945 0.498 NK_HLA L2
ENSG00000162607 USP1 627105 sc-eQTL 3.38e-01 -0.0947 0.0987 0.498 NK_HLA L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 4.22e-02 -0.182 0.0891 0.498 NK_HLA L2
ENSG00000079739 PGM1 -530009 sc-eQTL 8.88e-01 -0.011 0.0781 0.498 NK_cytokine L2
ENSG00000088035 ALG6 -304173 sc-eQTL 6.20e-01 -0.0438 0.0883 0.498 NK_cytokine L2
ENSG00000116641 DOCK7 375016 sc-eQTL 3.13e-01 0.0826 0.0816 0.498 NK_cytokine L2
ENSG00000125703 ATG4C 279270 sc-eQTL 2.13e-01 0.104 0.0834 0.498 NK_cytokine L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 3.80e-01 0.0762 0.0865 0.498 NK_cytokine L2
ENSG00000162607 USP1 627105 sc-eQTL 7.03e-01 0.0348 0.0911 0.498 NK_cytokine L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 5.25e-01 0.0587 0.0923 0.498 NK_cytokine L2
ENSG00000079739 PGM1 -530009 sc-eQTL 8.86e-03 0.271 0.102 0.507 PB L2
ENSG00000088035 ALG6 -304173 sc-eQTL 2.39e-01 -0.13 0.11 0.507 PB L2
ENSG00000116641 DOCK7 375016 sc-eQTL 2.76e-01 0.129 0.117 0.507 PB L2
ENSG00000125703 ATG4C 279270 sc-eQTL 2.09e-01 -0.129 0.102 0.507 PB L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 8.15e-01 -0.0241 0.103 0.507 PB L2
ENSG00000162607 USP1 627105 sc-eQTL 4.65e-01 -0.0749 0.102 0.507 PB L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 7.91e-02 0.197 0.111 0.507 PB L2
ENSG00000079739 PGM1 -530009 sc-eQTL 3.74e-02 0.17 0.0814 0.493 Pro_T L2
ENSG00000088035 ALG6 -304173 sc-eQTL 8.13e-01 -0.0198 0.0836 0.493 Pro_T L2
ENSG00000116641 DOCK7 375016 sc-eQTL 5.87e-01 -0.0456 0.0839 0.493 Pro_T L2
ENSG00000125703 ATG4C 279270 sc-eQTL 3.85e-01 -0.0639 0.0733 0.493 Pro_T L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.57e-01 0.104 0.0733 0.493 Pro_T L2
ENSG00000162607 USP1 627105 sc-eQTL 5.16e-01 0.033 0.0506 0.493 Pro_T L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 8.49e-01 -0.0164 0.0856 0.493 Pro_T L2
ENSG00000079739 PGM1 -530009 sc-eQTL 7.37e-01 -0.0296 0.088 0.498 Treg L2
ENSG00000088035 ALG6 -304173 sc-eQTL 6.55e-01 0.0421 0.0941 0.498 Treg L2
ENSG00000116641 DOCK7 375016 sc-eQTL 3.51e-02 -0.181 0.0855 0.498 Treg L2
ENSG00000125703 ATG4C 279270 sc-eQTL 6.58e-01 -0.0391 0.0883 0.498 Treg L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 4.06e-01 -0.0768 0.0923 0.498 Treg L2
ENSG00000162607 USP1 627105 sc-eQTL 2.70e-01 0.0986 0.0891 0.498 Treg L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 2.63e-01 -0.099 0.0881 0.498 Treg L2
ENSG00000079739 PGM1 -530009 sc-eQTL 3.55e-01 0.0822 0.0888 0.505 cDC L2
ENSG00000088035 ALG6 -304173 sc-eQTL 1.80e-01 -0.121 0.0898 0.505 cDC L2
ENSG00000116641 DOCK7 375016 sc-eQTL 7.28e-01 -0.0308 0.0885 0.505 cDC L2
ENSG00000125703 ATG4C 279270 sc-eQTL 1.83e-01 -0.102 0.0765 0.505 cDC L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 2.56e-01 0.111 0.0971 0.505 cDC L2
ENSG00000162607 USP1 627105 sc-eQTL 5.56e-01 -0.0512 0.0867 0.505 cDC L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 8.46e-01 -0.0152 0.0783 0.505 cDC L2
ENSG00000079739 PGM1 -530009 sc-eQTL 2.17e-01 0.101 0.0816 0.498 cMono_IL1B L2
ENSG00000088035 ALG6 -304173 sc-eQTL 4.96e-01 0.0559 0.0819 0.498 cMono_IL1B L2
ENSG00000116641 DOCK7 375016 sc-eQTL 1.01e-01 0.142 0.0859 0.498 cMono_IL1B L2
ENSG00000125703 ATG4C 279270 sc-eQTL 7.97e-01 0.0157 0.0608 0.498 cMono_IL1B L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 5.08e-01 0.0571 0.086 0.498 cMono_IL1B L2
ENSG00000162607 USP1 627105 sc-eQTL 9.52e-02 0.126 0.0754 0.498 cMono_IL1B L2
ENSG00000240563 L1TD1 868553 sc-eQTL 1.16e-02 -0.191 0.0751 0.498 cMono_IL1B L2
ENSG00000079739 PGM1 -530009 sc-eQTL 2.10e-01 0.113 0.0898 0.498 cMono_S100A L2
ENSG00000088035 ALG6 -304173 sc-eQTL 3.21e-01 0.0907 0.0911 0.498 cMono_S100A L2
ENSG00000116641 DOCK7 375016 sc-eQTL 4.69e-01 0.0613 0.0845 0.498 cMono_S100A L2
ENSG00000125703 ATG4C 279270 sc-eQTL 7.77e-01 0.0208 0.0733 0.498 cMono_S100A L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 5.64e-01 -0.0477 0.0826 0.498 cMono_S100A L2
ENSG00000162607 USP1 627105 sc-eQTL 9.66e-01 0.00368 0.0851 0.498 cMono_S100A L2
ENSG00000240563 L1TD1 868553 sc-eQTL 3.87e-01 -0.0613 0.0707 0.498 cMono_S100A L2
ENSG00000079739 PGM1 -530009 sc-eQTL 1.12e-01 0.169 0.106 0.491 gdT L2
ENSG00000088035 ALG6 -304173 sc-eQTL 3.44e-01 -0.108 0.113 0.491 gdT L2
ENSG00000116641 DOCK7 375016 sc-eQTL 7.96e-01 -0.0289 0.112 0.491 gdT L2
ENSG00000125703 ATG4C 279270 sc-eQTL 6.30e-01 0.0514 0.107 0.491 gdT L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.23e-01 0.174 0.112 0.491 gdT L2
ENSG00000162607 USP1 627105 sc-eQTL 5.57e-01 -0.063 0.107 0.491 gdT L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 7.05e-01 -0.0422 0.111 0.491 gdT L2
ENSG00000079739 PGM1 -530009 sc-eQTL 4.44e-01 0.0704 0.0918 0.502 intMono L2
ENSG00000088035 ALG6 -304173 sc-eQTL 1.74e-01 -0.116 0.0852 0.502 intMono L2
ENSG00000116641 DOCK7 375016 sc-eQTL 6.18e-01 -0.0436 0.0874 0.502 intMono L2
ENSG00000125703 ATG4C 279270 sc-eQTL 9.35e-02 -0.14 0.0829 0.502 intMono L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 8.53e-01 -0.0171 0.0919 0.502 intMono L2
ENSG00000162607 USP1 627105 sc-eQTL 1.86e-01 -0.124 0.0931 0.502 intMono L2
ENSG00000240563 L1TD1 868553 sc-eQTL 7.04e-01 -0.0262 0.0687 0.502 intMono L2
ENSG00000079739 PGM1 -530009 sc-eQTL 7.12e-01 -0.0316 0.0856 0.502 ncMono L2
ENSG00000088035 ALG6 -304173 sc-eQTL 5.95e-01 0.05 0.094 0.502 ncMono L2
ENSG00000116641 DOCK7 375016 sc-eQTL 9.26e-01 -0.00859 0.0926 0.502 ncMono L2
ENSG00000125703 ATG4C 279270 sc-eQTL 4.41e-01 -0.0666 0.0864 0.502 ncMono L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 5.54e-02 0.173 0.0897 0.502 ncMono L2
ENSG00000162607 USP1 627105 sc-eQTL 2.02e-02 -0.214 0.0912 0.502 ncMono L2
ENSG00000240563 L1TD1 868553 sc-eQTL 5.80e-01 -0.0363 0.0655 0.502 ncMono L2
ENSG00000079739 PGM1 -530009 sc-eQTL 6.06e-01 -0.0516 0.0997 0.5 pDC L2
ENSG00000088035 ALG6 -304173 sc-eQTL 1.08e-01 0.156 0.0964 0.5 pDC L2
ENSG00000116641 DOCK7 375016 sc-eQTL 6.65e-01 -0.043 0.0992 0.5 pDC L2
ENSG00000125703 ATG4C 279270 sc-eQTL 3.50e-01 -0.0832 0.0888 0.5 pDC L2
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.31e-01 0.151 0.0992 0.5 pDC L2
ENSG00000162607 USP1 627105 sc-eQTL 4.31e-01 0.0803 0.102 0.5 pDC L2
ENSG00000203965 EFCAB7 -459970 sc-eQTL 8.87e-01 0.0126 0.0885 0.5 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -530009 sc-eQTL 9.99e-01 8.85e-05 0.0843 0.498 B_Memory LOneK1K
ENSG00000088035 ALG6 -304173 sc-eQTL 8.68e-02 -0.159 0.0926 0.498 B_Memory LOneK1K
ENSG00000116641 DOCK7 375016 sc-eQTL 6.27e-01 -0.0393 0.0809 0.498 B_Memory LOneK1K
ENSG00000125703 ATG4C 279270 sc-eQTL 6.94e-01 -0.0257 0.0654 0.498 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -530319 sc-eQTL 9.48e-01 0.00556 0.0859 0.498 B_Memory LOneK1K
ENSG00000162607 USP1 627105 sc-eQTL 1.48e-01 0.12 0.083 0.498 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -459970 sc-eQTL 7.48e-01 -0.0288 0.0895 0.498 B_Memory LOneK1K
ENSG00000079739 PGM1 -530009 sc-eQTL 3.96e-01 0.0764 0.0897 0.498 B_Naive LOneK1K
ENSG00000088035 ALG6 -304173 sc-eQTL 4.31e-01 0.0729 0.0924 0.498 B_Naive LOneK1K
ENSG00000116641 DOCK7 375016 sc-eQTL 6.96e-01 -0.0338 0.0864 0.498 B_Naive LOneK1K
ENSG00000125703 ATG4C 279270 sc-eQTL 4.24e-01 0.0527 0.0659 0.498 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -530319 sc-eQTL 7.82e-02 0.164 0.0926 0.498 B_Naive LOneK1K
ENSG00000162607 USP1 627105 sc-eQTL 9.90e-01 -0.00104 0.0801 0.498 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -459970 sc-eQTL 2.66e-02 0.207 0.0926 0.498 B_Naive LOneK1K
ENSG00000079739 PGM1 -530009 sc-eQTL 2.07e-01 0.106 0.0834 0.498 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -304173 sc-eQTL 2.81e-01 0.0873 0.0808 0.498 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 375016 sc-eQTL 3.63e-02 0.17 0.0808 0.498 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 279270 sc-eQTL 5.94e-01 0.0301 0.0564 0.498 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -530319 sc-eQTL 9.77e-01 0.00246 0.0835 0.498 CD14_Mono LOneK1K
ENSG00000162607 USP1 627105 sc-eQTL 2.96e-01 0.0745 0.0711 0.498 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 868553 sc-eQTL 2.10e-01 -0.0968 0.077 0.498 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -530009 sc-eQTL 5.99e-01 -0.0422 0.0802 0.5 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -304173 sc-eQTL 5.28e-01 -0.0576 0.091 0.5 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 375016 sc-eQTL 2.89e-01 -0.0955 0.0899 0.5 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 279270 sc-eQTL 3.94e-01 -0.0655 0.0767 0.5 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -530319 sc-eQTL 1.78e-01 0.12 0.0888 0.5 CD16_Mono LOneK1K
ENSG00000162607 USP1 627105 sc-eQTL 1.22e-03 -0.268 0.0818 0.5 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 868553 sc-eQTL 9.37e-01 -0.0045 0.0572 0.5 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -530009 sc-eQTL 4.74e-01 -0.0495 0.069 0.498 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -304173 sc-eQTL 7.04e-01 -0.0315 0.083 0.498 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 375016 sc-eQTL 4.62e-01 0.0547 0.0742 0.498 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 279270 sc-eQTL 7.12e-01 0.0274 0.0742 0.498 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -530319 sc-eQTL 9.26e-02 0.148 0.0873 0.498 NK_CD56dim LOneK1K
ENSG00000162607 USP1 627105 sc-eQTL 4.90e-01 -0.0552 0.0797 0.498 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -459970 sc-eQTL 1.18e-01 -0.152 0.0966 0.498 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000240563 L1TD1 868553 eQTL 0.0117 0.095 0.0376 0.0 0.0 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina