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Genes within 1Mb (chr1:63060301:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -533110 sc-eQTL 5.29e-01 -0.0483 0.0767 0.502 B L1
ENSG00000088035 ALG6 -307274 sc-eQTL 3.55e-01 0.0736 0.0794 0.502 B L1
ENSG00000116641 DOCK7 371915 sc-eQTL 9.10e-01 0.00903 0.0795 0.502 B L1
ENSG00000125703 ATG4C 276169 sc-eQTL 3.48e-01 -0.0519 0.0552 0.502 B L1
ENSG00000142856 ITGB3BP -533420 sc-eQTL 3.32e-01 -0.0853 0.0878 0.502 B L1
ENSG00000162607 USP1 624004 sc-eQTL 8.55e-01 -0.0139 0.0763 0.502 B L1
ENSG00000203965 EFCAB7 -463071 sc-eQTL 3.02e-02 -0.194 0.0891 0.502 B L1
ENSG00000079739 PGM1 -533110 sc-eQTL 2.35e-01 0.0775 0.0651 0.502 CD4T L1
ENSG00000088035 ALG6 -307274 sc-eQTL 3.06e-01 -0.0737 0.0719 0.502 CD4T L1
ENSG00000116641 DOCK7 371915 sc-eQTL 9.34e-01 0.00603 0.0729 0.502 CD4T L1
ENSG00000125703 ATG4C 276169 sc-eQTL 6.54e-01 -0.0264 0.0589 0.502 CD4T L1
ENSG00000142856 ITGB3BP -533420 sc-eQTL 3.19e-02 -0.179 0.0827 0.502 CD4T L1
ENSG00000162607 USP1 624004 sc-eQTL 4.04e-01 -0.0477 0.057 0.502 CD4T L1
ENSG00000203965 EFCAB7 -463071 sc-eQTL 1.22e-01 -0.116 0.0746 0.502 CD4T L1
ENSG00000079739 PGM1 -533110 sc-eQTL 4.95e-02 -0.143 0.0725 0.502 CD8T L1
ENSG00000088035 ALG6 -307274 sc-eQTL 5.13e-01 0.0528 0.0806 0.502 CD8T L1
ENSG00000116641 DOCK7 371915 sc-eQTL 9.29e-01 -0.00732 0.0817 0.502 CD8T L1
ENSG00000125703 ATG4C 276169 sc-eQTL 4.49e-01 -0.0588 0.0775 0.502 CD8T L1
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.11e-01 -0.138 0.0863 0.502 CD8T L1
ENSG00000162607 USP1 624004 sc-eQTL 7.75e-01 0.0193 0.0676 0.502 CD8T L1
ENSG00000203965 EFCAB7 -463071 sc-eQTL 1.98e-02 -0.201 0.0854 0.502 CD8T L1
ENSG00000079739 PGM1 -533110 sc-eQTL 7.57e-01 0.0257 0.083 0.498 DC L1
ENSG00000088035 ALG6 -307274 sc-eQTL 6.61e-01 -0.0376 0.0856 0.498 DC L1
ENSG00000116641 DOCK7 371915 sc-eQTL 4.01e-01 0.0737 0.0876 0.498 DC L1
ENSG00000125703 ATG4C 276169 sc-eQTL 1.43e-02 0.167 0.0677 0.498 DC L1
ENSG00000142856 ITGB3BP -533420 sc-eQTL 2.11e-02 -0.22 0.0948 0.498 DC L1
ENSG00000162607 USP1 624004 sc-eQTL 5.78e-01 0.0467 0.0838 0.498 DC L1
ENSG00000203965 EFCAB7 -463071 sc-eQTL 3.60e-01 0.0766 0.0834 0.498 DC L1
ENSG00000079739 PGM1 -533110 sc-eQTL 1.82e-01 -0.105 0.0785 0.502 Mono L1
ENSG00000088035 ALG6 -307274 sc-eQTL 4.57e-01 -0.0612 0.0821 0.502 Mono L1
ENSG00000116641 DOCK7 371915 sc-eQTL 1.63e-01 -0.111 0.0792 0.502 Mono L1
ENSG00000125703 ATG4C 276169 sc-eQTL 9.03e-01 -0.00654 0.0537 0.502 Mono L1
ENSG00000142856 ITGB3BP -533420 sc-eQTL 7.00e-01 -0.0327 0.0849 0.502 Mono L1
ENSG00000162607 USP1 624004 sc-eQTL 5.74e-01 0.0393 0.0697 0.502 Mono L1
ENSG00000240563 L1TD1 865452 sc-eQTL 5.93e-02 0.122 0.0646 0.502 Mono L1
ENSG00000079739 PGM1 -533110 sc-eQTL 8.02e-01 0.0171 0.0682 0.5 NK L1
ENSG00000088035 ALG6 -307274 sc-eQTL 4.18e-01 0.0647 0.0798 0.5 NK L1
ENSG00000116641 DOCK7 371915 sc-eQTL 6.57e-01 -0.0292 0.0658 0.5 NK L1
ENSG00000125703 ATG4C 276169 sc-eQTL 8.87e-01 -0.01 0.0707 0.5 NK L1
ENSG00000142856 ITGB3BP -533420 sc-eQTL 5.45e-02 -0.168 0.0871 0.5 NK L1
ENSG00000162607 USP1 624004 sc-eQTL 4.43e-01 0.0603 0.0784 0.5 NK L1
ENSG00000203965 EFCAB7 -463071 sc-eQTL 2.40e-01 0.112 0.0951 0.5 NK L1
ENSG00000079739 PGM1 -533110 sc-eQTL 3.28e-01 -0.0749 0.0764 0.502 Other_T L1
ENSG00000088035 ALG6 -307274 sc-eQTL 6.71e-01 -0.0327 0.0769 0.502 Other_T L1
ENSG00000116641 DOCK7 371915 sc-eQTL 9.93e-01 -0.000661 0.0786 0.502 Other_T L1
ENSG00000125703 ATG4C 276169 sc-eQTL 9.26e-01 -0.00635 0.068 0.502 Other_T L1
ENSG00000142856 ITGB3BP -533420 sc-eQTL 3.19e-01 -0.0601 0.0602 0.502 Other_T L1
ENSG00000162607 USP1 624004 sc-eQTL 3.11e-01 0.0529 0.0522 0.502 Other_T L1
ENSG00000203965 EFCAB7 -463071 sc-eQTL 4.56e-01 -0.0694 0.093 0.502 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -533110 sc-eQTL 4.61e-01 -0.0733 0.0992 0.51 B_Activated L2
ENSG00000088035 ALG6 -307274 sc-eQTL 8.39e-01 0.0194 0.0952 0.51 B_Activated L2
ENSG00000116641 DOCK7 371915 sc-eQTL 9.14e-01 -0.00963 0.0886 0.51 B_Activated L2
ENSG00000125703 ATG4C 276169 sc-eQTL 8.72e-01 0.015 0.0932 0.51 B_Activated L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 8.54e-01 -0.0168 0.0911 0.51 B_Activated L2
ENSG00000162607 USP1 624004 sc-eQTL 9.83e-01 -0.00214 0.0987 0.51 B_Activated L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 4.47e-01 -0.0657 0.0861 0.51 B_Activated L2
ENSG00000079739 PGM1 -533110 sc-eQTL 9.02e-01 0.0113 0.092 0.504 B_Intermediate L2
ENSG00000088035 ALG6 -307274 sc-eQTL 2.49e-01 0.108 0.0932 0.504 B_Intermediate L2
ENSG00000116641 DOCK7 371915 sc-eQTL 8.37e-01 -0.0184 0.0893 0.504 B_Intermediate L2
ENSG00000125703 ATG4C 276169 sc-eQTL 3.62e-01 -0.069 0.0755 0.504 B_Intermediate L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 8.45e-01 -0.0176 0.0901 0.504 B_Intermediate L2
ENSG00000162607 USP1 624004 sc-eQTL 2.19e-01 0.11 0.0896 0.504 B_Intermediate L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 9.91e-01 0.00104 0.0892 0.504 B_Intermediate L2
ENSG00000079739 PGM1 -533110 sc-eQTL 3.90e-01 0.0771 0.0895 0.502 B_Memory L2
ENSG00000088035 ALG6 -307274 sc-eQTL 4.09e-01 0.0753 0.091 0.502 B_Memory L2
ENSG00000116641 DOCK7 371915 sc-eQTL 2.07e-01 0.108 0.0852 0.502 B_Memory L2
ENSG00000125703 ATG4C 276169 sc-eQTL 5.78e-01 0.0453 0.0812 0.502 B_Memory L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 6.30e-01 0.0448 0.0929 0.502 B_Memory L2
ENSG00000162607 USP1 624004 sc-eQTL 1.18e-02 -0.235 0.0924 0.502 B_Memory L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 1.49e-01 0.133 0.0918 0.502 B_Memory L2
ENSG00000079739 PGM1 -533110 sc-eQTL 1.55e-01 -0.13 0.0911 0.502 B_Naive1 L2
ENSG00000088035 ALG6 -307274 sc-eQTL 5.17e-01 -0.0597 0.0918 0.502 B_Naive1 L2
ENSG00000116641 DOCK7 371915 sc-eQTL 9.43e-01 -0.00632 0.0881 0.502 B_Naive1 L2
ENSG00000125703 ATG4C 276169 sc-eQTL 5.64e-01 -0.0392 0.0678 0.502 B_Naive1 L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 8.06e-02 -0.157 0.0894 0.502 B_Naive1 L2
ENSG00000162607 USP1 624004 sc-eQTL 6.62e-01 -0.0346 0.0791 0.502 B_Naive1 L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 6.19e-02 -0.179 0.0952 0.502 B_Naive1 L2
ENSG00000079739 PGM1 -533110 sc-eQTL 7.85e-01 0.0248 0.0908 0.504 B_Naive2 L2
ENSG00000088035 ALG6 -307274 sc-eQTL 8.58e-01 -0.017 0.0946 0.504 B_Naive2 L2
ENSG00000116641 DOCK7 371915 sc-eQTL 1.94e-01 0.118 0.0907 0.504 B_Naive2 L2
ENSG00000125703 ATG4C 276169 sc-eQTL 7.51e-01 -0.0278 0.0876 0.504 B_Naive2 L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 9.86e-01 -0.00165 0.095 0.504 B_Naive2 L2
ENSG00000162607 USP1 624004 sc-eQTL 9.40e-01 -0.00679 0.0904 0.504 B_Naive2 L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 1.07e-01 -0.152 0.094 0.504 B_Naive2 L2
ENSG00000079739 PGM1 -533110 sc-eQTL 2.83e-01 0.0982 0.0912 0.505 CD4_CTL L2
ENSG00000088035 ALG6 -307274 sc-eQTL 5.19e-02 -0.187 0.0958 0.505 CD4_CTL L2
ENSG00000116641 DOCK7 371915 sc-eQTL 4.23e-01 -0.0678 0.0844 0.505 CD4_CTL L2
ENSG00000125703 ATG4C 276169 sc-eQTL 5.15e-02 -0.17 0.0866 0.505 CD4_CTL L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 7.17e-01 0.0339 0.0935 0.505 CD4_CTL L2
ENSG00000162607 USP1 624004 sc-eQTL 9.30e-01 0.00786 0.089 0.505 CD4_CTL L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 4.02e-01 0.0745 0.0887 0.505 CD4_CTL L2
ENSG00000079739 PGM1 -533110 sc-eQTL 5.94e-01 0.0394 0.0737 0.502 CD4_Naive L2
ENSG00000088035 ALG6 -307274 sc-eQTL 4.03e-01 -0.0671 0.08 0.502 CD4_Naive L2
ENSG00000116641 DOCK7 371915 sc-eQTL 3.48e-01 -0.0739 0.0786 0.502 CD4_Naive L2
ENSG00000125703 ATG4C 276169 sc-eQTL 9.77e-01 0.00197 0.0696 0.502 CD4_Naive L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 4.12e-02 -0.173 0.0843 0.502 CD4_Naive L2
ENSG00000162607 USP1 624004 sc-eQTL 7.41e-01 -0.0215 0.065 0.502 CD4_Naive L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 6.89e-02 -0.153 0.0838 0.502 CD4_Naive L2
ENSG00000079739 PGM1 -533110 sc-eQTL 5.34e-01 -0.0476 0.0766 0.502 CD4_TCM L2
ENSG00000088035 ALG6 -307274 sc-eQTL 5.69e-01 0.0508 0.0889 0.502 CD4_TCM L2
ENSG00000116641 DOCK7 371915 sc-eQTL 4.70e-01 0.057 0.0788 0.502 CD4_TCM L2
ENSG00000125703 ATG4C 276169 sc-eQTL 1.16e-01 -0.12 0.0763 0.502 CD4_TCM L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.47e-01 -0.131 0.09 0.502 CD4_TCM L2
ENSG00000162607 USP1 624004 sc-eQTL 5.72e-01 0.042 0.0741 0.502 CD4_TCM L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 4.01e-01 -0.0736 0.0874 0.502 CD4_TCM L2
ENSG00000079739 PGM1 -533110 sc-eQTL 6.66e-03 0.246 0.0899 0.502 CD4_TEM L2
ENSG00000088035 ALG6 -307274 sc-eQTL 5.49e-01 -0.0552 0.0918 0.502 CD4_TEM L2
ENSG00000116641 DOCK7 371915 sc-eQTL 7.83e-01 0.0247 0.0896 0.502 CD4_TEM L2
ENSG00000125703 ATG4C 276169 sc-eQTL 6.64e-01 0.0379 0.087 0.502 CD4_TEM L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 6.42e-02 -0.166 0.0891 0.502 CD4_TEM L2
ENSG00000162607 USP1 624004 sc-eQTL 1.69e-02 -0.202 0.084 0.502 CD4_TEM L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 9.91e-01 -0.00108 0.0931 0.502 CD4_TEM L2
ENSG00000079739 PGM1 -533110 sc-eQTL 3.10e-01 -0.0852 0.0837 0.502 CD8_CTL L2
ENSG00000088035 ALG6 -307274 sc-eQTL 9.89e-01 -0.00118 0.0892 0.502 CD8_CTL L2
ENSG00000116641 DOCK7 371915 sc-eQTL 8.74e-01 -0.0135 0.0846 0.502 CD8_CTL L2
ENSG00000125703 ATG4C 276169 sc-eQTL 6.66e-02 -0.165 0.0894 0.502 CD8_CTL L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.00e-01 -0.154 0.0931 0.502 CD8_CTL L2
ENSG00000162607 USP1 624004 sc-eQTL 6.67e-01 -0.0361 0.0839 0.502 CD8_CTL L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 8.45e-02 -0.165 0.0953 0.502 CD8_CTL L2
ENSG00000079739 PGM1 -533110 sc-eQTL 2.51e-02 -0.185 0.0821 0.502 CD8_Naive L2
ENSG00000088035 ALG6 -307274 sc-eQTL 7.97e-01 -0.0221 0.086 0.502 CD8_Naive L2
ENSG00000116641 DOCK7 371915 sc-eQTL 2.13e-01 -0.111 0.0885 0.502 CD8_Naive L2
ENSG00000125703 ATG4C 276169 sc-eQTL 1.11e-01 -0.136 0.0848 0.502 CD8_Naive L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 2.70e-01 -0.0953 0.0862 0.502 CD8_Naive L2
ENSG00000162607 USP1 624004 sc-eQTL 5.63e-01 -0.0423 0.073 0.502 CD8_Naive L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 4.80e-01 -0.0575 0.0814 0.502 CD8_Naive L2
ENSG00000079739 PGM1 -533110 sc-eQTL 9.65e-01 -0.00401 0.092 0.505 CD8_TCM L2
ENSG00000088035 ALG6 -307274 sc-eQTL 3.89e-01 0.0803 0.093 0.505 CD8_TCM L2
ENSG00000116641 DOCK7 371915 sc-eQTL 9.49e-01 -0.00577 0.0909 0.505 CD8_TCM L2
ENSG00000125703 ATG4C 276169 sc-eQTL 8.04e-01 -0.0232 0.093 0.505 CD8_TCM L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 9.49e-01 0.00574 0.0904 0.505 CD8_TCM L2
ENSG00000162607 USP1 624004 sc-eQTL 6.07e-01 0.0447 0.0869 0.505 CD8_TCM L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 1.01e-01 -0.151 0.0915 0.505 CD8_TCM L2
ENSG00000079739 PGM1 -533110 sc-eQTL 3.67e-02 -0.193 0.0915 0.507 CD8_TEM L2
ENSG00000088035 ALG6 -307274 sc-eQTL 5.18e-01 0.0601 0.0928 0.507 CD8_TEM L2
ENSG00000116641 DOCK7 371915 sc-eQTL 9.28e-01 -0.00816 0.09 0.507 CD8_TEM L2
ENSG00000125703 ATG4C 276169 sc-eQTL 4.01e-03 0.247 0.0848 0.507 CD8_TEM L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 2.19e-01 -0.115 0.0933 0.507 CD8_TEM L2
ENSG00000162607 USP1 624004 sc-eQTL 8.87e-01 -0.0127 0.0894 0.507 CD8_TEM L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 3.29e-02 -0.193 0.0898 0.507 CD8_TEM L2
ENSG00000079739 PGM1 -533110 sc-eQTL 9.21e-01 -0.00892 0.0897 0.5 MAIT L2
ENSG00000088035 ALG6 -307274 sc-eQTL 2.27e-01 -0.107 0.0885 0.5 MAIT L2
ENSG00000116641 DOCK7 371915 sc-eQTL 5.57e-02 -0.162 0.0843 0.5 MAIT L2
ENSG00000125703 ATG4C 276169 sc-eQTL 1.98e-01 -0.115 0.0894 0.5 MAIT L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 9.38e-01 -0.00705 0.0899 0.5 MAIT L2
ENSG00000162607 USP1 624004 sc-eQTL 8.58e-01 0.0159 0.0892 0.5 MAIT L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 6.22e-01 -0.0457 0.0925 0.5 MAIT L2
ENSG00000079739 PGM1 -533110 sc-eQTL 8.80e-01 -0.0135 0.089 0.498 NK_CD56bright L2
ENSG00000088035 ALG6 -307274 sc-eQTL 6.33e-01 0.0436 0.0912 0.498 NK_CD56bright L2
ENSG00000116641 DOCK7 371915 sc-eQTL 3.06e-01 0.0809 0.0788 0.498 NK_CD56bright L2
ENSG00000125703 ATG4C 276169 sc-eQTL 3.04e-01 0.0908 0.0881 0.498 NK_CD56bright L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 2.63e-01 -0.103 0.0916 0.498 NK_CD56bright L2
ENSG00000162607 USP1 624004 sc-eQTL 9.05e-02 0.16 0.0941 0.498 NK_CD56bright L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 6.67e-01 0.0391 0.0906 0.498 NK_CD56bright L2
ENSG00000079739 PGM1 -533110 sc-eQTL 5.59e-01 0.0408 0.0698 0.502 NK_CD56dim L2
ENSG00000088035 ALG6 -307274 sc-eQTL 6.77e-01 -0.037 0.0886 0.502 NK_CD56dim L2
ENSG00000116641 DOCK7 371915 sc-eQTL 8.37e-01 -0.0158 0.0771 0.502 NK_CD56dim L2
ENSG00000125703 ATG4C 276169 sc-eQTL 6.84e-01 0.0319 0.0783 0.502 NK_CD56dim L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.26e-01 -0.136 0.0886 0.502 NK_CD56dim L2
ENSG00000162607 USP1 624004 sc-eQTL 1.88e-01 0.114 0.0861 0.502 NK_CD56dim L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 3.30e-01 0.0938 0.0961 0.502 NK_CD56dim L2
ENSG00000079739 PGM1 -533110 sc-eQTL 4.88e-01 -0.0678 0.0975 0.502 NK_HLA L2
ENSG00000088035 ALG6 -307274 sc-eQTL 2.54e-01 0.115 0.101 0.502 NK_HLA L2
ENSG00000116641 DOCK7 371915 sc-eQTL 3.88e-02 0.159 0.0766 0.502 NK_HLA L2
ENSG00000125703 ATG4C 276169 sc-eQTL 8.39e-01 0.0184 0.09 0.502 NK_HLA L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 7.66e-01 -0.0282 0.0945 0.502 NK_HLA L2
ENSG00000162607 USP1 624004 sc-eQTL 3.38e-01 0.0947 0.0987 0.502 NK_HLA L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 4.22e-02 0.182 0.0891 0.502 NK_HLA L2
ENSG00000079739 PGM1 -533110 sc-eQTL 8.88e-01 0.011 0.0781 0.502 NK_cytokine L2
ENSG00000088035 ALG6 -307274 sc-eQTL 6.20e-01 0.0438 0.0883 0.502 NK_cytokine L2
ENSG00000116641 DOCK7 371915 sc-eQTL 3.13e-01 -0.0826 0.0816 0.502 NK_cytokine L2
ENSG00000125703 ATG4C 276169 sc-eQTL 2.13e-01 -0.104 0.0834 0.502 NK_cytokine L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 3.80e-01 -0.0762 0.0865 0.502 NK_cytokine L2
ENSG00000162607 USP1 624004 sc-eQTL 7.03e-01 -0.0348 0.0911 0.502 NK_cytokine L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 5.25e-01 -0.0587 0.0923 0.502 NK_cytokine L2
ENSG00000079739 PGM1 -533110 sc-eQTL 8.86e-03 -0.271 0.102 0.493 PB L2
ENSG00000088035 ALG6 -307274 sc-eQTL 2.39e-01 0.13 0.11 0.493 PB L2
ENSG00000116641 DOCK7 371915 sc-eQTL 2.76e-01 -0.129 0.117 0.493 PB L2
ENSG00000125703 ATG4C 276169 sc-eQTL 2.09e-01 0.129 0.102 0.493 PB L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 8.15e-01 0.0241 0.103 0.493 PB L2
ENSG00000162607 USP1 624004 sc-eQTL 4.65e-01 0.0749 0.102 0.493 PB L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 7.91e-02 -0.197 0.111 0.493 PB L2
ENSG00000079739 PGM1 -533110 sc-eQTL 3.74e-02 -0.17 0.0814 0.507 Pro_T L2
ENSG00000088035 ALG6 -307274 sc-eQTL 8.13e-01 0.0198 0.0836 0.507 Pro_T L2
ENSG00000116641 DOCK7 371915 sc-eQTL 5.87e-01 0.0456 0.0839 0.507 Pro_T L2
ENSG00000125703 ATG4C 276169 sc-eQTL 3.85e-01 0.0639 0.0733 0.507 Pro_T L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.57e-01 -0.104 0.0733 0.507 Pro_T L2
ENSG00000162607 USP1 624004 sc-eQTL 5.16e-01 -0.033 0.0506 0.507 Pro_T L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 8.49e-01 0.0164 0.0856 0.507 Pro_T L2
ENSG00000079739 PGM1 -533110 sc-eQTL 7.37e-01 0.0296 0.088 0.502 Treg L2
ENSG00000088035 ALG6 -307274 sc-eQTL 6.55e-01 -0.0421 0.0941 0.502 Treg L2
ENSG00000116641 DOCK7 371915 sc-eQTL 3.51e-02 0.181 0.0855 0.502 Treg L2
ENSG00000125703 ATG4C 276169 sc-eQTL 6.58e-01 0.0391 0.0883 0.502 Treg L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 4.06e-01 0.0768 0.0923 0.502 Treg L2
ENSG00000162607 USP1 624004 sc-eQTL 2.70e-01 -0.0986 0.0891 0.502 Treg L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 2.63e-01 0.099 0.0881 0.502 Treg L2
ENSG00000079739 PGM1 -533110 sc-eQTL 3.55e-01 -0.0822 0.0888 0.495 cDC L2
ENSG00000088035 ALG6 -307274 sc-eQTL 1.80e-01 0.121 0.0898 0.495 cDC L2
ENSG00000116641 DOCK7 371915 sc-eQTL 7.28e-01 0.0308 0.0885 0.495 cDC L2
ENSG00000125703 ATG4C 276169 sc-eQTL 1.83e-01 0.102 0.0765 0.495 cDC L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 2.56e-01 -0.111 0.0971 0.495 cDC L2
ENSG00000162607 USP1 624004 sc-eQTL 5.56e-01 0.0512 0.0867 0.495 cDC L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 8.46e-01 0.0152 0.0783 0.495 cDC L2
ENSG00000079739 PGM1 -533110 sc-eQTL 2.17e-01 -0.101 0.0816 0.502 cMono_IL1B L2
ENSG00000088035 ALG6 -307274 sc-eQTL 4.96e-01 -0.0559 0.0819 0.502 cMono_IL1B L2
ENSG00000116641 DOCK7 371915 sc-eQTL 1.01e-01 -0.142 0.0859 0.502 cMono_IL1B L2
ENSG00000125703 ATG4C 276169 sc-eQTL 7.97e-01 -0.0157 0.0608 0.502 cMono_IL1B L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 5.08e-01 -0.0571 0.086 0.502 cMono_IL1B L2
ENSG00000162607 USP1 624004 sc-eQTL 9.52e-02 -0.126 0.0754 0.502 cMono_IL1B L2
ENSG00000240563 L1TD1 865452 sc-eQTL 1.16e-02 0.191 0.0751 0.502 cMono_IL1B L2
ENSG00000079739 PGM1 -533110 sc-eQTL 2.10e-01 -0.113 0.0898 0.502 cMono_S100A L2
ENSG00000088035 ALG6 -307274 sc-eQTL 3.21e-01 -0.0907 0.0911 0.502 cMono_S100A L2
ENSG00000116641 DOCK7 371915 sc-eQTL 4.69e-01 -0.0613 0.0845 0.502 cMono_S100A L2
ENSG00000125703 ATG4C 276169 sc-eQTL 7.77e-01 -0.0208 0.0733 0.502 cMono_S100A L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 5.64e-01 0.0477 0.0826 0.502 cMono_S100A L2
ENSG00000162607 USP1 624004 sc-eQTL 9.66e-01 -0.00368 0.0851 0.502 cMono_S100A L2
ENSG00000240563 L1TD1 865452 sc-eQTL 3.87e-01 0.0613 0.0707 0.502 cMono_S100A L2
ENSG00000079739 PGM1 -533110 sc-eQTL 1.12e-01 -0.169 0.106 0.509 gdT L2
ENSG00000088035 ALG6 -307274 sc-eQTL 3.44e-01 0.108 0.113 0.509 gdT L2
ENSG00000116641 DOCK7 371915 sc-eQTL 7.96e-01 0.0289 0.112 0.509 gdT L2
ENSG00000125703 ATG4C 276169 sc-eQTL 6.30e-01 -0.0514 0.107 0.509 gdT L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.23e-01 -0.174 0.112 0.509 gdT L2
ENSG00000162607 USP1 624004 sc-eQTL 5.57e-01 0.063 0.107 0.509 gdT L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 7.05e-01 0.0422 0.111 0.509 gdT L2
ENSG00000079739 PGM1 -533110 sc-eQTL 4.44e-01 -0.0704 0.0918 0.498 intMono L2
ENSG00000088035 ALG6 -307274 sc-eQTL 1.74e-01 0.116 0.0852 0.498 intMono L2
ENSG00000116641 DOCK7 371915 sc-eQTL 6.18e-01 0.0436 0.0874 0.498 intMono L2
ENSG00000125703 ATG4C 276169 sc-eQTL 9.35e-02 0.14 0.0829 0.498 intMono L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 8.53e-01 0.0171 0.0919 0.498 intMono L2
ENSG00000162607 USP1 624004 sc-eQTL 1.86e-01 0.124 0.0931 0.498 intMono L2
ENSG00000240563 L1TD1 865452 sc-eQTL 7.04e-01 0.0262 0.0687 0.498 intMono L2
ENSG00000079739 PGM1 -533110 sc-eQTL 7.12e-01 0.0316 0.0856 0.498 ncMono L2
ENSG00000088035 ALG6 -307274 sc-eQTL 5.95e-01 -0.05 0.094 0.498 ncMono L2
ENSG00000116641 DOCK7 371915 sc-eQTL 9.26e-01 0.00859 0.0926 0.498 ncMono L2
ENSG00000125703 ATG4C 276169 sc-eQTL 4.41e-01 0.0666 0.0864 0.498 ncMono L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 5.54e-02 -0.173 0.0897 0.498 ncMono L2
ENSG00000162607 USP1 624004 sc-eQTL 2.02e-02 0.214 0.0912 0.498 ncMono L2
ENSG00000240563 L1TD1 865452 sc-eQTL 5.80e-01 0.0363 0.0655 0.498 ncMono L2
ENSG00000079739 PGM1 -533110 sc-eQTL 6.06e-01 0.0516 0.0997 0.5 pDC L2
ENSG00000088035 ALG6 -307274 sc-eQTL 1.08e-01 -0.156 0.0964 0.5 pDC L2
ENSG00000116641 DOCK7 371915 sc-eQTL 6.65e-01 0.043 0.0992 0.5 pDC L2
ENSG00000125703 ATG4C 276169 sc-eQTL 3.50e-01 0.0832 0.0888 0.5 pDC L2
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.31e-01 -0.151 0.0992 0.5 pDC L2
ENSG00000162607 USP1 624004 sc-eQTL 4.31e-01 -0.0803 0.102 0.5 pDC L2
ENSG00000203965 EFCAB7 -463071 sc-eQTL 8.87e-01 -0.0126 0.0885 0.5 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -533110 sc-eQTL 9.99e-01 -8.85e-05 0.0843 0.502 B_Memory LOneK1K
ENSG00000088035 ALG6 -307274 sc-eQTL 8.68e-02 0.159 0.0926 0.502 B_Memory LOneK1K
ENSG00000116641 DOCK7 371915 sc-eQTL 6.27e-01 0.0393 0.0809 0.502 B_Memory LOneK1K
ENSG00000125703 ATG4C 276169 sc-eQTL 6.94e-01 0.0257 0.0654 0.502 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -533420 sc-eQTL 9.48e-01 -0.00556 0.0859 0.502 B_Memory LOneK1K
ENSG00000162607 USP1 624004 sc-eQTL 1.48e-01 -0.12 0.083 0.502 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -463071 sc-eQTL 7.48e-01 0.0288 0.0895 0.502 B_Memory LOneK1K
ENSG00000079739 PGM1 -533110 sc-eQTL 3.96e-01 -0.0764 0.0897 0.502 B_Naive LOneK1K
ENSG00000088035 ALG6 -307274 sc-eQTL 4.31e-01 -0.0729 0.0924 0.502 B_Naive LOneK1K
ENSG00000116641 DOCK7 371915 sc-eQTL 6.96e-01 0.0338 0.0864 0.502 B_Naive LOneK1K
ENSG00000125703 ATG4C 276169 sc-eQTL 4.24e-01 -0.0527 0.0659 0.502 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -533420 sc-eQTL 7.82e-02 -0.164 0.0926 0.502 B_Naive LOneK1K
ENSG00000162607 USP1 624004 sc-eQTL 9.90e-01 0.00104 0.0801 0.502 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -463071 sc-eQTL 2.66e-02 -0.207 0.0926 0.502 B_Naive LOneK1K
ENSG00000079739 PGM1 -533110 sc-eQTL 2.07e-01 -0.106 0.0834 0.502 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -307274 sc-eQTL 2.81e-01 -0.0873 0.0808 0.502 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 371915 sc-eQTL 3.63e-02 -0.17 0.0808 0.502 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 276169 sc-eQTL 5.94e-01 -0.0301 0.0564 0.502 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -533420 sc-eQTL 9.77e-01 -0.00246 0.0835 0.502 CD14_Mono LOneK1K
ENSG00000162607 USP1 624004 sc-eQTL 2.96e-01 -0.0745 0.0711 0.502 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 865452 sc-eQTL 2.10e-01 0.0968 0.077 0.502 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -533110 sc-eQTL 5.99e-01 0.0422 0.0802 0.5 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -307274 sc-eQTL 5.28e-01 0.0576 0.091 0.5 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 371915 sc-eQTL 2.89e-01 0.0955 0.0899 0.5 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 276169 sc-eQTL 3.94e-01 0.0655 0.0767 0.5 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -533420 sc-eQTL 1.78e-01 -0.12 0.0888 0.5 CD16_Mono LOneK1K
ENSG00000162607 USP1 624004 sc-eQTL 1.22e-03 0.268 0.0818 0.5 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 865452 sc-eQTL 9.37e-01 0.0045 0.0572 0.5 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -533110 sc-eQTL 4.74e-01 0.0495 0.069 0.502 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -307274 sc-eQTL 7.04e-01 0.0315 0.083 0.502 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 371915 sc-eQTL 4.62e-01 -0.0547 0.0742 0.502 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 276169 sc-eQTL 7.12e-01 -0.0274 0.0742 0.502 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -533420 sc-eQTL 9.26e-02 -0.148 0.0873 0.502 NK_CD56dim LOneK1K
ENSG00000162607 USP1 624004 sc-eQTL 4.90e-01 0.0552 0.0797 0.502 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -463071 sc-eQTL 1.18e-01 0.152 0.0966 0.502 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000240563 L1TD1 865452 eQTL 0.0211 -0.0867 0.0375 0.0 0.0 0.459

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina