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Genes within 1Mb (chr1:63055899:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -537512 sc-eQTL 1.44e-01 -0.118 0.0807 0.571 B L1
ENSG00000088035 ALG6 -311676 sc-eQTL 2.62e-01 0.0943 0.0838 0.571 B L1
ENSG00000116641 DOCK7 367513 sc-eQTL 9.07e-01 0.00984 0.084 0.571 B L1
ENSG00000125703 ATG4C 271767 sc-eQTL 8.66e-01 0.00984 0.0584 0.571 B L1
ENSG00000142856 ITGB3BP -537822 sc-eQTL 4.34e-01 -0.0728 0.0928 0.571 B L1
ENSG00000162607 USP1 619602 sc-eQTL 3.10e-01 -0.082 0.0805 0.571 B L1
ENSG00000203965 EFCAB7 -467473 sc-eQTL 7.38e-02 -0.17 0.0945 0.571 B L1
ENSG00000079739 PGM1 -537512 sc-eQTL 9.01e-01 0.00855 0.0686 0.571 CD4T L1
ENSG00000088035 ALG6 -311676 sc-eQTL 3.56e-01 -0.0699 0.0756 0.571 CD4T L1
ENSG00000116641 DOCK7 367513 sc-eQTL 6.40e-01 0.0359 0.0766 0.571 CD4T L1
ENSG00000125703 ATG4C 271767 sc-eQTL 9.64e-01 0.00279 0.0619 0.571 CD4T L1
ENSG00000142856 ITGB3BP -537822 sc-eQTL 1.63e-02 -0.21 0.0866 0.571 CD4T L1
ENSG00000162607 USP1 619602 sc-eQTL 1.80e-01 -0.0804 0.0598 0.571 CD4T L1
ENSG00000203965 EFCAB7 -467473 sc-eQTL 9.16e-02 -0.133 0.0783 0.571 CD4T L1
ENSG00000079739 PGM1 -537512 sc-eQTL 1.07e-01 -0.124 0.0763 0.571 CD8T L1
ENSG00000088035 ALG6 -311676 sc-eQTL 3.58e-01 0.0777 0.0844 0.571 CD8T L1
ENSG00000116641 DOCK7 367513 sc-eQTL 7.55e-01 -0.0268 0.0857 0.571 CD8T L1
ENSG00000125703 ATG4C 271767 sc-eQTL 4.89e-01 -0.0564 0.0813 0.571 CD8T L1
ENSG00000142856 ITGB3BP -537822 sc-eQTL 1.14e-01 -0.144 0.0905 0.571 CD8T L1
ENSG00000162607 USP1 619602 sc-eQTL 9.24e-01 -0.00678 0.0709 0.571 CD8T L1
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.04e-02 -0.196 0.0898 0.571 CD8T L1
ENSG00000079739 PGM1 -537512 sc-eQTL 9.71e-01 0.00316 0.0871 0.57 DC L1
ENSG00000088035 ALG6 -311676 sc-eQTL 6.06e-01 -0.0464 0.0898 0.57 DC L1
ENSG00000116641 DOCK7 367513 sc-eQTL 8.62e-01 0.016 0.0921 0.57 DC L1
ENSG00000125703 ATG4C 271767 sc-eQTL 8.34e-03 0.189 0.0708 0.57 DC L1
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.38e-01 -0.119 0.1 0.57 DC L1
ENSG00000162607 USP1 619602 sc-eQTL 7.59e-01 -0.027 0.0879 0.57 DC L1
ENSG00000203965 EFCAB7 -467473 sc-eQTL 4.02e-01 0.0736 0.0875 0.57 DC L1
ENSG00000079739 PGM1 -537512 sc-eQTL 3.48e-01 -0.0787 0.0837 0.571 Mono L1
ENSG00000088035 ALG6 -311676 sc-eQTL 4.53e-01 -0.0658 0.0874 0.571 Mono L1
ENSG00000116641 DOCK7 367513 sc-eQTL 3.62e-01 -0.0771 0.0845 0.571 Mono L1
ENSG00000125703 ATG4C 271767 sc-eQTL 9.22e-01 -0.00558 0.0572 0.571 Mono L1
ENSG00000142856 ITGB3BP -537822 sc-eQTL 6.11e-01 -0.046 0.0903 0.571 Mono L1
ENSG00000162607 USP1 619602 sc-eQTL 5.00e-01 0.0501 0.0742 0.571 Mono L1
ENSG00000240563 L1TD1 861050 sc-eQTL 1.03e-02 0.177 0.0682 0.571 Mono L1
ENSG00000079739 PGM1 -537512 sc-eQTL 2.99e-01 0.0739 0.071 0.569 NK L1
ENSG00000088035 ALG6 -311676 sc-eQTL 2.61e-02 0.185 0.0825 0.569 NK L1
ENSG00000116641 DOCK7 367513 sc-eQTL 9.65e-01 -0.003 0.0688 0.569 NK L1
ENSG00000125703 ATG4C 271767 sc-eQTL 5.86e-01 -0.0402 0.0738 0.569 NK L1
ENSG00000142856 ITGB3BP -537822 sc-eQTL 3.27e-02 -0.195 0.0908 0.569 NK L1
ENSG00000162607 USP1 619602 sc-eQTL 8.81e-01 0.0123 0.082 0.569 NK L1
ENSG00000203965 EFCAB7 -467473 sc-eQTL 2.56e-01 0.113 0.0993 0.569 NK L1
ENSG00000079739 PGM1 -537512 sc-eQTL 6.85e-01 -0.0329 0.081 0.571 Other_T L1
ENSG00000088035 ALG6 -311676 sc-eQTL 2.01e-01 -0.104 0.0811 0.571 Other_T L1
ENSG00000116641 DOCK7 367513 sc-eQTL 9.89e-01 -0.00117 0.0831 0.571 Other_T L1
ENSG00000125703 ATG4C 271767 sc-eQTL 3.05e-01 -0.0738 0.0718 0.571 Other_T L1
ENSG00000142856 ITGB3BP -537822 sc-eQTL 3.18e-01 -0.0637 0.0637 0.571 Other_T L1
ENSG00000162607 USP1 619602 sc-eQTL 3.07e-01 0.0565 0.0552 0.571 Other_T L1
ENSG00000203965 EFCAB7 -467473 sc-eQTL 6.45e-01 -0.0454 0.0984 0.571 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -537512 sc-eQTL 4.91e-01 -0.0738 0.107 0.584 B_Activated L2
ENSG00000088035 ALG6 -311676 sc-eQTL 8.10e-01 -0.0247 0.103 0.584 B_Activated L2
ENSG00000116641 DOCK7 367513 sc-eQTL 8.77e-01 0.0147 0.0955 0.584 B_Activated L2
ENSG00000125703 ATG4C 271767 sc-eQTL 4.29e-01 0.0795 0.1 0.584 B_Activated L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 7.45e-01 0.0319 0.0981 0.584 B_Activated L2
ENSG00000162607 USP1 619602 sc-eQTL 6.22e-01 -0.0526 0.106 0.584 B_Activated L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.92e-01 -0.0795 0.0927 0.584 B_Activated L2
ENSG00000079739 PGM1 -537512 sc-eQTL 4.44e-01 -0.0747 0.0975 0.573 B_Intermediate L2
ENSG00000088035 ALG6 -311676 sc-eQTL 4.40e-01 0.0766 0.099 0.573 B_Intermediate L2
ENSG00000116641 DOCK7 367513 sc-eQTL 8.62e-01 0.0164 0.0947 0.573 B_Intermediate L2
ENSG00000125703 ATG4C 271767 sc-eQTL 5.63e-01 -0.0464 0.0801 0.573 B_Intermediate L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 7.06e-01 -0.036 0.0955 0.573 B_Intermediate L2
ENSG00000162607 USP1 619602 sc-eQTL 4.83e-01 0.0669 0.0952 0.573 B_Intermediate L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.89e-01 0.0815 0.0944 0.573 B_Intermediate L2
ENSG00000079739 PGM1 -537512 sc-eQTL 9.05e-01 0.0113 0.0945 0.571 B_Memory L2
ENSG00000088035 ALG6 -311676 sc-eQTL 2.10e-01 0.12 0.0957 0.571 B_Memory L2
ENSG00000116641 DOCK7 367513 sc-eQTL 1.06e-01 0.146 0.0896 0.571 B_Memory L2
ENSG00000125703 ATG4C 271767 sc-eQTL 3.33e-01 0.083 0.0855 0.571 B_Memory L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 6.17e-01 0.0491 0.098 0.571 B_Memory L2
ENSG00000162607 USP1 619602 sc-eQTL 6.29e-03 -0.268 0.0971 0.571 B_Memory L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 9.31e-02 0.163 0.0966 0.571 B_Memory L2
ENSG00000079739 PGM1 -537512 sc-eQTL 1.84e-01 -0.129 0.0968 0.571 B_Naive1 L2
ENSG00000088035 ALG6 -311676 sc-eQTL 6.11e-01 -0.0496 0.0975 0.571 B_Naive1 L2
ENSG00000116641 DOCK7 367513 sc-eQTL 8.17e-01 0.0217 0.0935 0.571 B_Naive1 L2
ENSG00000125703 ATG4C 271767 sc-eQTL 8.83e-01 -0.0106 0.072 0.571 B_Naive1 L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.45e-01 -0.111 0.0952 0.571 B_Naive1 L2
ENSG00000162607 USP1 619602 sc-eQTL 4.13e-01 -0.0688 0.0839 0.571 B_Naive1 L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.19e-02 -0.218 0.101 0.571 B_Naive1 L2
ENSG00000079739 PGM1 -537512 sc-eQTL 5.66e-01 -0.056 0.0975 0.573 B_Naive2 L2
ENSG00000088035 ALG6 -311676 sc-eQTL 7.82e-01 0.0282 0.102 0.573 B_Naive2 L2
ENSG00000116641 DOCK7 367513 sc-eQTL 4.18e-01 0.0793 0.0977 0.573 B_Naive2 L2
ENSG00000125703 ATG4C 271767 sc-eQTL 8.25e-01 0.0208 0.0942 0.573 B_Naive2 L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 9.99e-01 6.99e-05 0.102 0.573 B_Naive2 L2
ENSG00000162607 USP1 619602 sc-eQTL 8.62e-01 0.0169 0.0972 0.573 B_Naive2 L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.90e-01 -0.0874 0.101 0.573 B_Naive2 L2
ENSG00000079739 PGM1 -537512 sc-eQTL 2.45e-01 0.112 0.0964 0.573 CD4_CTL L2
ENSG00000088035 ALG6 -311676 sc-eQTL 1.17e-01 -0.16 0.102 0.573 CD4_CTL L2
ENSG00000116641 DOCK7 367513 sc-eQTL 6.84e-01 -0.0365 0.0894 0.573 CD4_CTL L2
ENSG00000125703 ATG4C 271767 sc-eQTL 9.85e-02 -0.152 0.0919 0.573 CD4_CTL L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 9.05e-01 0.0118 0.0989 0.573 CD4_CTL L2
ENSG00000162607 USP1 619602 sc-eQTL 6.24e-01 0.0462 0.0941 0.573 CD4_CTL L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 6.30e-01 0.0454 0.094 0.573 CD4_CTL L2
ENSG00000079739 PGM1 -537512 sc-eQTL 9.62e-01 -0.00367 0.0772 0.571 CD4_Naive L2
ENSG00000088035 ALG6 -311676 sc-eQTL 2.18e-01 -0.103 0.0835 0.571 CD4_Naive L2
ENSG00000116641 DOCK7 367513 sc-eQTL 8.93e-01 -0.0111 0.0824 0.571 CD4_Naive L2
ENSG00000125703 ATG4C 271767 sc-eQTL 4.25e-01 0.0581 0.0727 0.571 CD4_Naive L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.14e-02 -0.204 0.0879 0.571 CD4_Naive L2
ENSG00000162607 USP1 619602 sc-eQTL 2.59e-01 -0.0767 0.0678 0.571 CD4_Naive L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 6.85e-02 -0.161 0.0877 0.571 CD4_Naive L2
ENSG00000079739 PGM1 -537512 sc-eQTL 7.68e-02 -0.142 0.0796 0.571 CD4_TCM L2
ENSG00000088035 ALG6 -311676 sc-eQTL 5.91e-01 0.0501 0.093 0.571 CD4_TCM L2
ENSG00000116641 DOCK7 367513 sc-eQTL 1.15e-01 0.13 0.082 0.571 CD4_TCM L2
ENSG00000125703 ATG4C 271767 sc-eQTL 8.49e-02 -0.138 0.0798 0.571 CD4_TCM L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.00e-01 -0.121 0.0943 0.571 CD4_TCM L2
ENSG00000162607 USP1 619602 sc-eQTL 9.53e-01 -0.00463 0.0776 0.571 CD4_TCM L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 1.22e-01 -0.142 0.0911 0.571 CD4_TCM L2
ENSG00000079739 PGM1 -537512 sc-eQTL 4.79e-02 0.189 0.0951 0.571 CD4_TEM L2
ENSG00000088035 ALG6 -311676 sc-eQTL 4.13e-01 -0.079 0.0963 0.571 CD4_TEM L2
ENSG00000116641 DOCK7 367513 sc-eQTL 5.43e-01 -0.0572 0.0939 0.571 CD4_TEM L2
ENSG00000125703 ATG4C 271767 sc-eQTL 9.59e-01 0.00467 0.0913 0.571 CD4_TEM L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 4.18e-02 -0.191 0.0933 0.571 CD4_TEM L2
ENSG00000162607 USP1 619602 sc-eQTL 1.61e-02 -0.214 0.0881 0.571 CD4_TEM L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 5.10e-01 0.0644 0.0976 0.571 CD4_TEM L2
ENSG00000079739 PGM1 -537512 sc-eQTL 5.75e-01 -0.0494 0.0879 0.571 CD8_CTL L2
ENSG00000088035 ALG6 -311676 sc-eQTL 9.55e-01 -0.00523 0.0935 0.571 CD8_CTL L2
ENSG00000116641 DOCK7 367513 sc-eQTL 7.35e-01 -0.0301 0.0887 0.571 CD8_CTL L2
ENSG00000125703 ATG4C 271767 sc-eQTL 6.13e-02 -0.176 0.0937 0.571 CD8_CTL L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 7.59e-02 -0.174 0.0975 0.571 CD8_CTL L2
ENSG00000162607 USP1 619602 sc-eQTL 8.99e-01 -0.0111 0.088 0.571 CD8_CTL L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 1.21e-01 -0.156 0.1 0.571 CD8_CTL L2
ENSG00000079739 PGM1 -537512 sc-eQTL 8.54e-03 -0.231 0.0869 0.571 CD8_Naive L2
ENSG00000088035 ALG6 -311676 sc-eQTL 8.94e-01 -0.0122 0.0915 0.571 CD8_Naive L2
ENSG00000116641 DOCK7 367513 sc-eQTL 1.77e-01 -0.128 0.0942 0.571 CD8_Naive L2
ENSG00000125703 ATG4C 271767 sc-eQTL 1.56e-01 -0.128 0.0904 0.571 CD8_Naive L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 1.04e-01 -0.149 0.0914 0.571 CD8_Naive L2
ENSG00000162607 USP1 619602 sc-eQTL 4.55e-01 -0.0581 0.0776 0.571 CD8_Naive L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 4.44e-01 -0.0663 0.0866 0.571 CD8_Naive L2
ENSG00000079739 PGM1 -537512 sc-eQTL 4.12e-01 0.0809 0.0984 0.565 CD8_TCM L2
ENSG00000088035 ALG6 -311676 sc-eQTL 2.79e-01 0.108 0.0995 0.565 CD8_TCM L2
ENSG00000116641 DOCK7 367513 sc-eQTL 8.12e-01 -0.0232 0.0974 0.565 CD8_TCM L2
ENSG00000125703 ATG4C 271767 sc-eQTL 9.13e-01 0.0108 0.0996 0.565 CD8_TCM L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 4.23e-01 0.0775 0.0966 0.565 CD8_TCM L2
ENSG00000162607 USP1 619602 sc-eQTL 8.71e-01 -0.0152 0.0931 0.565 CD8_TCM L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 1.68e-01 -0.136 0.0981 0.565 CD8_TCM L2
ENSG00000079739 PGM1 -537512 sc-eQTL 6.81e-02 -0.181 0.0984 0.575 CD8_TEM L2
ENSG00000088035 ALG6 -311676 sc-eQTL 4.46e-01 0.0759 0.0994 0.575 CD8_TEM L2
ENSG00000116641 DOCK7 367513 sc-eQTL 5.20e-01 -0.0622 0.0964 0.575 CD8_TEM L2
ENSG00000125703 ATG4C 271767 sc-eQTL 9.82e-02 0.153 0.0922 0.575 CD8_TEM L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.73e-01 -0.11 0.1 0.575 CD8_TEM L2
ENSG00000162607 USP1 619602 sc-eQTL 9.63e-01 -0.00447 0.0959 0.575 CD8_TEM L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 1.62e-02 -0.233 0.096 0.575 CD8_TEM L2
ENSG00000079739 PGM1 -537512 sc-eQTL 3.07e-01 0.0972 0.0949 0.569 MAIT L2
ENSG00000088035 ALG6 -311676 sc-eQTL 6.78e-02 -0.172 0.0935 0.569 MAIT L2
ENSG00000116641 DOCK7 367513 sc-eQTL 2.63e-01 -0.101 0.09 0.569 MAIT L2
ENSG00000125703 ATG4C 271767 sc-eQTL 5.12e-02 -0.185 0.0943 0.569 MAIT L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 7.23e-01 -0.0338 0.0953 0.569 MAIT L2
ENSG00000162607 USP1 619602 sc-eQTL 7.41e-01 -0.0314 0.0946 0.569 MAIT L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 8.86e-01 0.0141 0.0982 0.569 MAIT L2
ENSG00000079739 PGM1 -537512 sc-eQTL 4.57e-01 -0.0709 0.095 0.567 NK_CD56bright L2
ENSG00000088035 ALG6 -311676 sc-eQTL 5.02e-01 0.0656 0.0974 0.567 NK_CD56bright L2
ENSG00000116641 DOCK7 367513 sc-eQTL 3.51e-01 0.0788 0.0843 0.567 NK_CD56bright L2
ENSG00000125703 ATG4C 271767 sc-eQTL 7.45e-01 0.0308 0.0944 0.567 NK_CD56bright L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.61e-01 -0.111 0.098 0.567 NK_CD56bright L2
ENSG00000162607 USP1 619602 sc-eQTL 8.78e-02 0.173 0.101 0.567 NK_CD56bright L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 7.45e-01 0.0316 0.097 0.567 NK_CD56bright L2
ENSG00000079739 PGM1 -537512 sc-eQTL 2.51e-01 0.0843 0.0733 0.571 NK_CD56dim L2
ENSG00000088035 ALG6 -311676 sc-eQTL 5.97e-01 0.0493 0.0932 0.571 NK_CD56dim L2
ENSG00000116641 DOCK7 367513 sc-eQTL 6.23e-01 0.0399 0.0811 0.571 NK_CD56dim L2
ENSG00000125703 ATG4C 271767 sc-eQTL 7.84e-01 0.0227 0.0824 0.571 NK_CD56dim L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.80e-01 -0.101 0.0935 0.571 NK_CD56dim L2
ENSG00000162607 USP1 619602 sc-eQTL 6.99e-01 0.0351 0.0909 0.571 NK_CD56dim L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 2.00e-01 0.13 0.101 0.571 NK_CD56dim L2
ENSG00000079739 PGM1 -537512 sc-eQTL 9.03e-01 0.0126 0.103 0.575 NK_HLA L2
ENSG00000088035 ALG6 -311676 sc-eQTL 2.95e-01 0.112 0.107 0.575 NK_HLA L2
ENSG00000116641 DOCK7 367513 sc-eQTL 1.17e-01 0.128 0.0812 0.575 NK_HLA L2
ENSG00000125703 ATG4C 271767 sc-eQTL 7.97e-01 -0.0245 0.0951 0.575 NK_HLA L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 3.33e-01 -0.0967 0.0996 0.575 NK_HLA L2
ENSG00000162607 USP1 619602 sc-eQTL 3.18e-01 0.104 0.104 0.575 NK_HLA L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 9.30e-02 0.159 0.0944 0.575 NK_HLA L2
ENSG00000079739 PGM1 -537512 sc-eQTL 6.94e-01 0.0323 0.082 0.571 NK_cytokine L2
ENSG00000088035 ALG6 -311676 sc-eQTL 1.73e-01 0.126 0.0923 0.571 NK_cytokine L2
ENSG00000116641 DOCK7 367513 sc-eQTL 4.60e-01 -0.0635 0.0858 0.571 NK_cytokine L2
ENSG00000125703 ATG4C 271767 sc-eQTL 2.11e-01 -0.11 0.0875 0.571 NK_cytokine L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 1.33e-01 -0.137 0.0905 0.571 NK_cytokine L2
ENSG00000162607 USP1 619602 sc-eQTL 7.73e-01 -0.0276 0.0957 0.571 NK_cytokine L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.96e-01 -0.0823 0.0968 0.571 NK_cytokine L2
ENSG00000079739 PGM1 -537512 sc-eQTL 4.51e-02 -0.217 0.107 0.563 PB L2
ENSG00000088035 ALG6 -311676 sc-eQTL 2.44e-01 0.134 0.114 0.563 PB L2
ENSG00000116641 DOCK7 367513 sc-eQTL 3.75e-01 -0.109 0.122 0.563 PB L2
ENSG00000125703 ATG4C 271767 sc-eQTL 1.36e-01 0.159 0.106 0.563 PB L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 8.41e-01 0.0215 0.107 0.563 PB L2
ENSG00000162607 USP1 619602 sc-eQTL 3.77e-01 0.094 0.106 0.563 PB L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 1.12e-01 -0.186 0.116 0.563 PB L2
ENSG00000079739 PGM1 -537512 sc-eQTL 4.55e-03 -0.246 0.0859 0.572 Pro_T L2
ENSG00000088035 ALG6 -311676 sc-eQTL 9.80e-01 -0.00228 0.0891 0.572 Pro_T L2
ENSG00000116641 DOCK7 367513 sc-eQTL 7.86e-01 -0.0242 0.0894 0.572 Pro_T L2
ENSG00000125703 ATG4C 271767 sc-eQTL 3.93e-01 0.0669 0.0781 0.572 Pro_T L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 4.71e-01 -0.0566 0.0784 0.572 Pro_T L2
ENSG00000162607 USP1 619602 sc-eQTL 6.99e-01 -0.0209 0.0539 0.572 Pro_T L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 5.38e-01 -0.0562 0.0911 0.572 Pro_T L2
ENSG00000079739 PGM1 -537512 sc-eQTL 8.09e-01 -0.0227 0.0936 0.571 Treg L2
ENSG00000088035 ALG6 -311676 sc-eQTL 9.66e-01 0.00432 0.1 0.571 Treg L2
ENSG00000116641 DOCK7 367513 sc-eQTL 3.65e-01 0.0833 0.0917 0.571 Treg L2
ENSG00000125703 ATG4C 271767 sc-eQTL 2.32e-01 0.112 0.0935 0.571 Treg L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 9.17e-01 -0.0102 0.0982 0.571 Treg L2
ENSG00000162607 USP1 619602 sc-eQTL 2.12e-01 -0.118 0.0947 0.571 Treg L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 4.03e-01 0.0786 0.0938 0.571 Treg L2
ENSG00000079739 PGM1 -537512 sc-eQTL 3.22e-01 -0.0939 0.0946 0.568 cDC L2
ENSG00000088035 ALG6 -311676 sc-eQTL 1.53e-01 0.137 0.0957 0.568 cDC L2
ENSG00000116641 DOCK7 367513 sc-eQTL 8.62e-01 -0.0164 0.0944 0.568 cDC L2
ENSG00000125703 ATG4C 271767 sc-eQTL 2.92e-01 0.0864 0.0817 0.568 cDC L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 6.03e-01 -0.0541 0.104 0.568 cDC L2
ENSG00000162607 USP1 619602 sc-eQTL 9.39e-01 0.00706 0.0925 0.568 cDC L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 5.78e-01 -0.0465 0.0834 0.568 cDC L2
ENSG00000079739 PGM1 -537512 sc-eQTL 3.97e-01 -0.0741 0.0873 0.571 cMono_IL1B L2
ENSG00000088035 ALG6 -311676 sc-eQTL 4.97e-01 -0.0594 0.0875 0.571 cMono_IL1B L2
ENSG00000116641 DOCK7 367513 sc-eQTL 3.66e-01 -0.0835 0.0921 0.571 cMono_IL1B L2
ENSG00000125703 ATG4C 271767 sc-eQTL 7.07e-01 -0.0244 0.0649 0.571 cMono_IL1B L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 4.12e-01 -0.0755 0.0918 0.571 cMono_IL1B L2
ENSG00000162607 USP1 619602 sc-eQTL 1.88e-01 -0.107 0.0808 0.571 cMono_IL1B L2
ENSG00000240563 L1TD1 861050 sc-eQTL 1.91e-03 0.25 0.0796 0.571 cMono_IL1B L2
ENSG00000079739 PGM1 -537512 sc-eQTL 3.56e-01 -0.0891 0.0963 0.571 cMono_S100A L2
ENSG00000088035 ALG6 -311676 sc-eQTL 2.82e-01 -0.105 0.0975 0.571 cMono_S100A L2
ENSG00000116641 DOCK7 367513 sc-eQTL 4.65e-01 -0.0663 0.0905 0.571 cMono_S100A L2
ENSG00000125703 ATG4C 271767 sc-eQTL 8.32e-01 0.0166 0.0785 0.571 cMono_S100A L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 5.48e-01 0.0532 0.0885 0.571 cMono_S100A L2
ENSG00000162607 USP1 619602 sc-eQTL 7.77e-01 0.0258 0.0911 0.571 cMono_S100A L2
ENSG00000240563 L1TD1 861050 sc-eQTL 5.93e-01 0.0406 0.0758 0.571 cMono_S100A L2
ENSG00000079739 PGM1 -537512 sc-eQTL 1.22e-01 -0.177 0.114 0.573 gdT L2
ENSG00000088035 ALG6 -311676 sc-eQTL 4.77e-01 0.0872 0.122 0.573 gdT L2
ENSG00000116641 DOCK7 367513 sc-eQTL 6.32e-01 0.0576 0.12 0.573 gdT L2
ENSG00000125703 ATG4C 271767 sc-eQTL 9.84e-01 -0.00229 0.115 0.573 gdT L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 4.58e-01 -0.0905 0.122 0.573 gdT L2
ENSG00000162607 USP1 619602 sc-eQTL 3.41e-01 0.11 0.115 0.573 gdT L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.57e-01 0.11 0.12 0.573 gdT L2
ENSG00000079739 PGM1 -537512 sc-eQTL 3.04e-01 -0.101 0.0982 0.564 intMono L2
ENSG00000088035 ALG6 -311676 sc-eQTL 5.51e-01 0.0547 0.0916 0.564 intMono L2
ENSG00000116641 DOCK7 367513 sc-eQTL 3.59e-01 0.0858 0.0934 0.564 intMono L2
ENSG00000125703 ATG4C 271767 sc-eQTL 7.10e-02 0.161 0.0887 0.564 intMono L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 8.40e-01 -0.0199 0.0984 0.564 intMono L2
ENSG00000162607 USP1 619602 sc-eQTL 7.69e-01 0.0295 0.1 0.564 intMono L2
ENSG00000240563 L1TD1 861050 sc-eQTL 3.39e-01 0.0705 0.0735 0.564 intMono L2
ENSG00000079739 PGM1 -537512 sc-eQTL 9.69e-01 -0.0035 0.0908 0.566 ncMono L2
ENSG00000088035 ALG6 -311676 sc-eQTL 1.00e+00 5.67e-05 0.0998 0.566 ncMono L2
ENSG00000116641 DOCK7 367513 sc-eQTL 7.14e-01 -0.036 0.0982 0.566 ncMono L2
ENSG00000125703 ATG4C 271767 sc-eQTL 7.21e-01 0.0328 0.0917 0.566 ncMono L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 1.52e-01 -0.137 0.0955 0.566 ncMono L2
ENSG00000162607 USP1 619602 sc-eQTL 1.73e-02 0.232 0.0966 0.566 ncMono L2
ENSG00000240563 L1TD1 861050 sc-eQTL 1.54e-01 0.0991 0.0692 0.566 ncMono L2
ENSG00000079739 PGM1 -537512 sc-eQTL 6.25e-01 0.0521 0.106 0.573 pDC L2
ENSG00000088035 ALG6 -311676 sc-eQTL 7.98e-02 -0.181 0.103 0.573 pDC L2
ENSG00000116641 DOCK7 367513 sc-eQTL 9.28e-01 -0.00958 0.106 0.573 pDC L2
ENSG00000125703 ATG4C 271767 sc-eQTL 1.15e-01 0.149 0.0942 0.573 pDC L2
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.35e-01 -0.127 0.106 0.573 pDC L2
ENSG00000162607 USP1 619602 sc-eQTL 2.79e-01 -0.117 0.108 0.573 pDC L2
ENSG00000203965 EFCAB7 -467473 sc-eQTL 6.97e-01 0.0368 0.0943 0.573 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -537512 sc-eQTL 2.87e-01 -0.0956 0.0896 0.571 B_Memory LOneK1K
ENSG00000088035 ALG6 -311676 sc-eQTL 5.64e-02 0.189 0.0985 0.571 B_Memory LOneK1K
ENSG00000116641 DOCK7 367513 sc-eQTL 3.24e-01 0.085 0.086 0.571 B_Memory LOneK1K
ENSG00000125703 ATG4C 271767 sc-eQTL 4.93e-01 0.0478 0.0696 0.571 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -537822 sc-eQTL 9.16e-01 0.00964 0.0916 0.571 B_Memory LOneK1K
ENSG00000162607 USP1 619602 sc-eQTL 5.51e-02 -0.17 0.0881 0.571 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.87e-01 0.0826 0.0953 0.571 B_Memory LOneK1K
ENSG00000079739 PGM1 -537512 sc-eQTL 2.63e-01 -0.107 0.0951 0.571 B_Naive LOneK1K
ENSG00000088035 ALG6 -311676 sc-eQTL 6.86e-01 -0.0398 0.0981 0.571 B_Naive LOneK1K
ENSG00000116641 DOCK7 367513 sc-eQTL 7.12e-01 0.0339 0.0916 0.571 B_Naive LOneK1K
ENSG00000125703 ATG4C 271767 sc-eQTL 8.92e-01 0.0095 0.0699 0.571 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.03e-01 -0.126 0.0985 0.571 B_Naive LOneK1K
ENSG00000162607 USP1 619602 sc-eQTL 7.27e-01 -0.0297 0.0849 0.571 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -467473 sc-eQTL 3.08e-02 -0.214 0.0983 0.571 B_Naive LOneK1K
ENSG00000079739 PGM1 -537512 sc-eQTL 4.58e-01 -0.0666 0.0896 0.571 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -311676 sc-eQTL 2.33e-01 -0.104 0.0866 0.571 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 367513 sc-eQTL 1.17e-01 -0.137 0.087 0.571 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 271767 sc-eQTL 6.36e-01 -0.0286 0.0604 0.571 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -537822 sc-eQTL 9.10e-01 -0.0101 0.0895 0.571 CD14_Mono LOneK1K
ENSG00000162607 USP1 619602 sc-eQTL 6.64e-01 -0.0333 0.0764 0.571 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 861050 sc-eQTL 1.37e-01 0.123 0.0824 0.571 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -537512 sc-eQTL 9.39e-01 -0.00659 0.0854 0.569 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -311676 sc-eQTL 4.76e-01 0.0692 0.0969 0.569 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 367513 sc-eQTL 2.20e-01 0.118 0.0956 0.569 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 271767 sc-eQTL 6.54e-01 0.0367 0.0818 0.569 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -537822 sc-eQTL 2.27e-01 -0.115 0.0947 0.569 CD16_Mono LOneK1K
ENSG00000162607 USP1 619602 sc-eQTL 2.87e-02 0.194 0.0882 0.569 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 861050 sc-eQTL 2.18e-01 0.075 0.0607 0.569 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -537512 sc-eQTL 1.12e-01 0.114 0.0715 0.571 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -311676 sc-eQTL 8.78e-02 0.147 0.0858 0.571 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 367513 sc-eQTL 8.55e-01 -0.0141 0.0774 0.571 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 271767 sc-eQTL 5.54e-01 -0.0457 0.0772 0.571 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -537822 sc-eQTL 6.12e-02 -0.171 0.0908 0.571 NK_CD56dim LOneK1K
ENSG00000162607 USP1 619602 sc-eQTL 9.96e-01 0.000426 0.0832 0.571 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -467473 sc-eQTL 1.16e-01 0.159 0.101 0.571 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000240563 L1TD1 861050 eQTL 0.00967 -0.0968 0.0373 0.0 0.0 0.49

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina