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Genes within 1Mb (chr1:63036458:A:AT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -556953 sc-eQTL 5.97e-01 -0.0812 0.153 0.923 B L1
ENSG00000088035 ALG6 -331117 sc-eQTL 9.64e-01 -0.00713 0.159 0.923 B L1
ENSG00000116641 DOCK7 348072 sc-eQTL 3.49e-02 -0.334 0.157 0.923 B L1
ENSG00000125703 ATG4C 252326 sc-eQTL 3.94e-01 -0.0941 0.11 0.923 B L1
ENSG00000142856 ITGB3BP -557263 sc-eQTL 6.71e-01 -0.0748 0.176 0.923 B L1
ENSG00000162607 USP1 600161 sc-eQTL 6.96e-02 -0.276 0.151 0.923 B L1
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.94e-02 -0.305 0.179 0.923 B L1
ENSG00000079739 PGM1 -556953 sc-eQTL 8.01e-02 0.226 0.129 0.923 CD4T L1
ENSG00000088035 ALG6 -331117 sc-eQTL 8.41e-01 0.0287 0.143 0.923 CD4T L1
ENSG00000116641 DOCK7 348072 sc-eQTL 7.87e-01 0.0391 0.145 0.923 CD4T L1
ENSG00000125703 ATG4C 252326 sc-eQTL 5.45e-01 0.0707 0.117 0.923 CD4T L1
ENSG00000142856 ITGB3BP -557263 sc-eQTL 4.57e-01 -0.123 0.166 0.923 CD4T L1
ENSG00000162607 USP1 600161 sc-eQTL 9.74e-01 0.00365 0.113 0.923 CD4T L1
ENSG00000203965 EFCAB7 -486914 sc-eQTL 3.05e-01 -0.153 0.148 0.923 CD4T L1
ENSG00000079739 PGM1 -556953 sc-eQTL 8.23e-01 0.0317 0.141 0.923 CD8T L1
ENSG00000088035 ALG6 -331117 sc-eQTL 8.22e-03 0.408 0.153 0.923 CD8T L1
ENSG00000116641 DOCK7 348072 sc-eQTL 6.16e-01 0.079 0.157 0.923 CD8T L1
ENSG00000125703 ATG4C 252326 sc-eQTL 1.99e-01 0.192 0.149 0.923 CD8T L1
ENSG00000142856 ITGB3BP -557263 sc-eQTL 5.28e-01 -0.106 0.167 0.923 CD8T L1
ENSG00000162607 USP1 600161 sc-eQTL 5.03e-01 -0.0874 0.13 0.923 CD8T L1
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.06e-01 0.041 0.167 0.923 CD8T L1
ENSG00000079739 PGM1 -556953 sc-eQTL 8.70e-01 0.0265 0.162 0.923 DC L1
ENSG00000088035 ALG6 -331117 sc-eQTL 3.13e-01 0.169 0.167 0.923 DC L1
ENSG00000116641 DOCK7 348072 sc-eQTL 9.17e-01 -0.0179 0.171 0.923 DC L1
ENSG00000125703 ATG4C 252326 sc-eQTL 1.79e-01 0.18 0.134 0.923 DC L1
ENSG00000142856 ITGB3BP -557263 sc-eQTL 5.68e-01 -0.107 0.187 0.923 DC L1
ENSG00000162607 USP1 600161 sc-eQTL 5.19e-01 0.106 0.164 0.923 DC L1
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.28e-01 0.0354 0.163 0.923 DC L1
ENSG00000079739 PGM1 -556953 sc-eQTL 2.10e-01 0.193 0.153 0.923 Mono L1
ENSG00000088035 ALG6 -331117 sc-eQTL 7.89e-01 -0.043 0.16 0.923 Mono L1
ENSG00000116641 DOCK7 348072 sc-eQTL 7.43e-01 0.0509 0.155 0.923 Mono L1
ENSG00000125703 ATG4C 252326 sc-eQTL 6.11e-01 0.0534 0.105 0.923 Mono L1
ENSG00000142856 ITGB3BP -557263 sc-eQTL 3.97e-01 -0.14 0.165 0.923 Mono L1
ENSG00000162607 USP1 600161 sc-eQTL 5.51e-01 -0.0811 0.136 0.923 Mono L1
ENSG00000240563 L1TD1 841609 sc-eQTL 9.70e-02 0.21 0.126 0.923 Mono L1
ENSG00000079739 PGM1 -556953 sc-eQTL 6.73e-01 0.0558 0.132 0.923 NK L1
ENSG00000088035 ALG6 -331117 sc-eQTL 9.75e-01 0.00477 0.155 0.923 NK L1
ENSG00000116641 DOCK7 348072 sc-eQTL 4.73e-01 0.0917 0.127 0.923 NK L1
ENSG00000125703 ATG4C 252326 sc-eQTL 6.04e-01 -0.0712 0.137 0.923 NK L1
ENSG00000142856 ITGB3BP -557263 sc-eQTL 1.81e-01 -0.228 0.17 0.923 NK L1
ENSG00000162607 USP1 600161 sc-eQTL 2.54e-02 0.339 0.15 0.923 NK L1
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.81e-01 0.0278 0.185 0.923 NK L1
ENSG00000079739 PGM1 -556953 sc-eQTL 2.31e-01 -0.18 0.15 0.923 Other_T L1
ENSG00000088035 ALG6 -331117 sc-eQTL 6.77e-01 0.063 0.151 0.923 Other_T L1
ENSG00000116641 DOCK7 348072 sc-eQTL 2.10e-01 -0.193 0.153 0.923 Other_T L1
ENSG00000125703 ATG4C 252326 sc-eQTL 2.52e-01 0.153 0.133 0.923 Other_T L1
ENSG00000142856 ITGB3BP -557263 sc-eQTL 2.76e-01 -0.129 0.118 0.923 Other_T L1
ENSG00000162607 USP1 600161 sc-eQTL 7.07e-01 0.0385 0.102 0.923 Other_T L1
ENSG00000203965 EFCAB7 -486914 sc-eQTL 5.86e-01 -0.0993 0.182 0.923 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -556953 sc-eQTL 6.65e-01 -0.0911 0.21 0.931 B_Activated L2
ENSG00000088035 ALG6 -331117 sc-eQTL 5.06e-01 -0.134 0.201 0.931 B_Activated L2
ENSG00000116641 DOCK7 348072 sc-eQTL 5.39e-02 0.36 0.185 0.931 B_Activated L2
ENSG00000125703 ATG4C 252326 sc-eQTL 2.43e-01 -0.23 0.196 0.931 B_Activated L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 9.72e-01 -0.00687 0.193 0.931 B_Activated L2
ENSG00000162607 USP1 600161 sc-eQTL 3.41e-01 -0.199 0.208 0.931 B_Activated L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.91e-01 -0.0251 0.182 0.931 B_Activated L2
ENSG00000079739 PGM1 -556953 sc-eQTL 1.20e-01 -0.284 0.182 0.925 B_Intermediate L2
ENSG00000088035 ALG6 -331117 sc-eQTL 1.68e-01 0.256 0.185 0.925 B_Intermediate L2
ENSG00000116641 DOCK7 348072 sc-eQTL 1.06e-01 -0.286 0.176 0.925 B_Intermediate L2
ENSG00000125703 ATG4C 252326 sc-eQTL 1.64e-01 0.209 0.149 0.925 B_Intermediate L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 4.67e-01 0.13 0.179 0.925 B_Intermediate L2
ENSG00000162607 USP1 600161 sc-eQTL 4.70e-01 0.129 0.178 0.925 B_Intermediate L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 2.01e-01 -0.226 0.177 0.925 B_Intermediate L2
ENSG00000079739 PGM1 -556953 sc-eQTL 3.55e-01 0.162 0.175 0.922 B_Memory L2
ENSG00000088035 ALG6 -331117 sc-eQTL 8.65e-01 -0.0304 0.179 0.922 B_Memory L2
ENSG00000116641 DOCK7 348072 sc-eQTL 6.45e-01 0.0773 0.167 0.922 B_Memory L2
ENSG00000125703 ATG4C 252326 sc-eQTL 7.57e-01 0.0492 0.159 0.922 B_Memory L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 5.60e-02 0.347 0.181 0.922 B_Memory L2
ENSG00000162607 USP1 600161 sc-eQTL 7.84e-02 -0.322 0.182 0.922 B_Memory L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 6.67e-01 -0.0778 0.181 0.922 B_Memory L2
ENSG00000079739 PGM1 -556953 sc-eQTL 9.28e-01 0.0162 0.18 0.923 B_Naive1 L2
ENSG00000088035 ALG6 -331117 sc-eQTL 3.44e-01 -0.171 0.18 0.923 B_Naive1 L2
ENSG00000116641 DOCK7 348072 sc-eQTL 3.43e-02 -0.364 0.171 0.923 B_Naive1 L2
ENSG00000125703 ATG4C 252326 sc-eQTL 2.68e-01 -0.147 0.133 0.923 B_Naive1 L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 6.93e-01 -0.0699 0.177 0.923 B_Naive1 L2
ENSG00000162607 USP1 600161 sc-eQTL 6.11e-01 -0.0791 0.155 0.923 B_Naive1 L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 1.30e-01 -0.285 0.188 0.923 B_Naive1 L2
ENSG00000079739 PGM1 -556953 sc-eQTL 1.44e-01 -0.256 0.175 0.923 B_Naive2 L2
ENSG00000088035 ALG6 -331117 sc-eQTL 7.80e-02 0.322 0.182 0.923 B_Naive2 L2
ENSG00000116641 DOCK7 348072 sc-eQTL 9.96e-01 -0.000877 0.176 0.923 B_Naive2 L2
ENSG00000125703 ATG4C 252326 sc-eQTL 2.39e-01 -0.199 0.169 0.923 B_Naive2 L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 7.38e-02 -0.327 0.182 0.923 B_Naive2 L2
ENSG00000162607 USP1 600161 sc-eQTL 8.93e-01 0.0235 0.175 0.923 B_Naive2 L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 9.24e-01 0.0174 0.183 0.923 B_Naive2 L2
ENSG00000079739 PGM1 -556953 sc-eQTL 3.46e-01 0.17 0.18 0.925 CD4_CTL L2
ENSG00000088035 ALG6 -331117 sc-eQTL 5.87e-01 0.104 0.19 0.925 CD4_CTL L2
ENSG00000116641 DOCK7 348072 sc-eQTL 5.52e-02 0.318 0.165 0.925 CD4_CTL L2
ENSG00000125703 ATG4C 252326 sc-eQTL 8.48e-01 0.0331 0.172 0.925 CD4_CTL L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 6.50e-01 -0.0836 0.184 0.925 CD4_CTL L2
ENSG00000162607 USP1 600161 sc-eQTL 8.31e-01 -0.0374 0.175 0.925 CD4_CTL L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 7.01e-01 0.0674 0.175 0.925 CD4_CTL L2
ENSG00000079739 PGM1 -556953 sc-eQTL 1.51e-01 0.208 0.144 0.923 CD4_Naive L2
ENSG00000088035 ALG6 -331117 sc-eQTL 8.91e-01 -0.0217 0.157 0.923 CD4_Naive L2
ENSG00000116641 DOCK7 348072 sc-eQTL 8.41e-01 0.0311 0.155 0.923 CD4_Naive L2
ENSG00000125703 ATG4C 252326 sc-eQTL 5.70e-01 0.0776 0.137 0.923 CD4_Naive L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 5.68e-01 -0.0955 0.167 0.923 CD4_Naive L2
ENSG00000162607 USP1 600161 sc-eQTL 7.56e-01 0.0396 0.128 0.923 CD4_Naive L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 3.10e-01 -0.168 0.165 0.923 CD4_Naive L2
ENSG00000079739 PGM1 -556953 sc-eQTL 7.44e-01 -0.049 0.15 0.923 CD4_TCM L2
ENSG00000088035 ALG6 -331117 sc-eQTL 4.57e-01 0.129 0.174 0.923 CD4_TCM L2
ENSG00000116641 DOCK7 348072 sc-eQTL 4.08e-01 0.128 0.154 0.923 CD4_TCM L2
ENSG00000125703 ATG4C 252326 sc-eQTL 8.12e-01 0.0358 0.15 0.923 CD4_TCM L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 3.40e-01 -0.169 0.177 0.923 CD4_TCM L2
ENSG00000162607 USP1 600161 sc-eQTL 9.39e-01 -0.0111 0.145 0.923 CD4_TCM L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 2.76e-01 -0.187 0.171 0.923 CD4_TCM L2
ENSG00000079739 PGM1 -556953 sc-eQTL 5.44e-02 0.343 0.177 0.923 CD4_TEM L2
ENSG00000088035 ALG6 -331117 sc-eQTL 3.34e-01 -0.174 0.18 0.923 CD4_TEM L2
ENSG00000116641 DOCK7 348072 sc-eQTL 4.96e-01 -0.119 0.175 0.923 CD4_TEM L2
ENSG00000125703 ATG4C 252326 sc-eQTL 8.22e-01 -0.0384 0.17 0.923 CD4_TEM L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 2.82e-01 -0.189 0.175 0.923 CD4_TEM L2
ENSG00000162607 USP1 600161 sc-eQTL 1.78e-01 -0.224 0.166 0.923 CD4_TEM L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 6.76e-01 0.0763 0.182 0.923 CD4_TEM L2
ENSG00000079739 PGM1 -556953 sc-eQTL 5.93e-01 -0.0871 0.162 0.923 CD8_CTL L2
ENSG00000088035 ALG6 -331117 sc-eQTL 5.49e-01 0.104 0.173 0.923 CD8_CTL L2
ENSG00000116641 DOCK7 348072 sc-eQTL 4.55e-01 -0.123 0.164 0.923 CD8_CTL L2
ENSG00000125703 ATG4C 252326 sc-eQTL 3.52e-01 -0.162 0.174 0.923 CD8_CTL L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 7.68e-01 0.0536 0.181 0.923 CD8_CTL L2
ENSG00000162607 USP1 600161 sc-eQTL 1.05e-01 -0.263 0.162 0.923 CD8_CTL L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.11e-01 0.0445 0.186 0.923 CD8_CTL L2
ENSG00000079739 PGM1 -556953 sc-eQTL 4.59e-01 0.121 0.163 0.923 CD8_Naive L2
ENSG00000088035 ALG6 -331117 sc-eQTL 1.64e-02 0.402 0.166 0.923 CD8_Naive L2
ENSG00000116641 DOCK7 348072 sc-eQTL 9.78e-01 -0.00491 0.174 0.923 CD8_Naive L2
ENSG00000125703 ATG4C 252326 sc-eQTL 1.55e-01 0.237 0.167 0.923 CD8_Naive L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 8.96e-01 -0.0223 0.169 0.923 CD8_Naive L2
ENSG00000162607 USP1 600161 sc-eQTL 5.46e-01 -0.0866 0.143 0.923 CD8_Naive L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 4.36e-01 -0.124 0.16 0.923 CD8_Naive L2
ENSG00000079739 PGM1 -556953 sc-eQTL 3.19e-01 -0.176 0.176 0.921 CD8_TCM L2
ENSG00000088035 ALG6 -331117 sc-eQTL 2.19e-02 0.408 0.176 0.921 CD8_TCM L2
ENSG00000116641 DOCK7 348072 sc-eQTL 2.25e-01 -0.212 0.174 0.921 CD8_TCM L2
ENSG00000125703 ATG4C 252326 sc-eQTL 2.38e-01 0.211 0.178 0.921 CD8_TCM L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 8.20e-01 -0.0395 0.173 0.921 CD8_TCM L2
ENSG00000162607 USP1 600161 sc-eQTL 6.20e-01 0.0829 0.167 0.921 CD8_TCM L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.65e-01 -0.0301 0.177 0.921 CD8_TCM L2
ENSG00000079739 PGM1 -556953 sc-eQTL 6.84e-02 -0.33 0.18 0.927 CD8_TEM L2
ENSG00000088035 ALG6 -331117 sc-eQTL 9.84e-01 0.00369 0.182 0.927 CD8_TEM L2
ENSG00000116641 DOCK7 348072 sc-eQTL 2.62e-01 0.198 0.176 0.927 CD8_TEM L2
ENSG00000125703 ATG4C 252326 sc-eQTL 2.64e-01 0.19 0.17 0.927 CD8_TEM L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 8.58e-02 -0.315 0.183 0.927 CD8_TEM L2
ENSG00000162607 USP1 600161 sc-eQTL 3.72e-01 -0.157 0.175 0.927 CD8_TEM L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 2.61e-01 -0.201 0.178 0.927 CD8_TEM L2
ENSG00000079739 PGM1 -556953 sc-eQTL 8.35e-02 -0.301 0.173 0.924 MAIT L2
ENSG00000088035 ALG6 -331117 sc-eQTL 7.82e-01 0.0478 0.172 0.924 MAIT L2
ENSG00000116641 DOCK7 348072 sc-eQTL 1.95e-01 -0.214 0.164 0.924 MAIT L2
ENSG00000125703 ATG4C 252326 sc-eQTL 6.38e-01 0.082 0.174 0.924 MAIT L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 8.70e-01 0.0286 0.174 0.924 MAIT L2
ENSG00000162607 USP1 600161 sc-eQTL 6.47e-01 -0.0792 0.173 0.924 MAIT L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 7.95e-01 -0.0468 0.18 0.924 MAIT L2
ENSG00000079739 PGM1 -556953 sc-eQTL 6.12e-01 0.0884 0.174 0.924 NK_CD56bright L2
ENSG00000088035 ALG6 -331117 sc-eQTL 3.41e-01 0.17 0.178 0.924 NK_CD56bright L2
ENSG00000116641 DOCK7 348072 sc-eQTL 3.35e-01 -0.149 0.154 0.924 NK_CD56bright L2
ENSG00000125703 ATG4C 252326 sc-eQTL 8.18e-01 -0.0398 0.173 0.924 NK_CD56bright L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 1.99e-01 -0.231 0.179 0.924 NK_CD56bright L2
ENSG00000162607 USP1 600161 sc-eQTL 3.19e-01 0.185 0.185 0.924 NK_CD56bright L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 8.77e-01 -0.0274 0.178 0.924 NK_CD56bright L2
ENSG00000079739 PGM1 -556953 sc-eQTL 1.23e-01 0.211 0.136 0.925 NK_CD56dim L2
ENSG00000088035 ALG6 -331117 sc-eQTL 6.75e-01 -0.073 0.174 0.925 NK_CD56dim L2
ENSG00000116641 DOCK7 348072 sc-eQTL 6.07e-01 -0.0779 0.151 0.925 NK_CD56dim L2
ENSG00000125703 ATG4C 252326 sc-eQTL 7.39e-01 0.0514 0.154 0.925 NK_CD56dim L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 9.76e-01 -0.00533 0.175 0.925 NK_CD56dim L2
ENSG00000162607 USP1 600161 sc-eQTL 4.68e-02 0.336 0.168 0.925 NK_CD56dim L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 9.71e-01 0.00683 0.189 0.925 NK_CD56dim L2
ENSG00000079739 PGM1 -556953 sc-eQTL 6.08e-01 -0.0961 0.187 0.925 NK_HLA L2
ENSG00000088035 ALG6 -331117 sc-eQTL 9.96e-01 -0.00108 0.194 0.925 NK_HLA L2
ENSG00000116641 DOCK7 348072 sc-eQTL 6.64e-02 0.271 0.147 0.925 NK_HLA L2
ENSG00000125703 ATG4C 252326 sc-eQTL 3.71e-01 -0.154 0.172 0.925 NK_HLA L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 3.68e-01 -0.163 0.181 0.925 NK_HLA L2
ENSG00000162607 USP1 600161 sc-eQTL 7.77e-02 -0.333 0.188 0.925 NK_HLA L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 2.87e-01 -0.184 0.172 0.925 NK_HLA L2
ENSG00000079739 PGM1 -556953 sc-eQTL 6.94e-01 -0.0597 0.151 0.925 NK_cytokine L2
ENSG00000088035 ALG6 -331117 sc-eQTL 3.88e-01 -0.148 0.171 0.925 NK_cytokine L2
ENSG00000116641 DOCK7 348072 sc-eQTL 4.35e-01 0.124 0.158 0.925 NK_cytokine L2
ENSG00000125703 ATG4C 252326 sc-eQTL 8.01e-01 0.0408 0.162 0.925 NK_cytokine L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 7.01e-01 -0.0646 0.168 0.925 NK_cytokine L2
ENSG00000162607 USP1 600161 sc-eQTL 1.25e-01 0.271 0.176 0.925 NK_cytokine L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 9.02e-01 0.022 0.179 0.925 NK_cytokine L2
ENSG00000079739 PGM1 -556953 sc-eQTL 6.02e-01 0.103 0.197 0.911 PB L2
ENSG00000088035 ALG6 -331117 sc-eQTL 3.33e-01 0.201 0.206 0.911 PB L2
ENSG00000116641 DOCK7 348072 sc-eQTL 4.88e-01 -0.154 0.221 0.911 PB L2
ENSG00000125703 ATG4C 252326 sc-eQTL 4.15e-01 0.157 0.192 0.911 PB L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 2.62e-01 -0.216 0.192 0.911 PB L2
ENSG00000162607 USP1 600161 sc-eQTL 8.20e-01 -0.0437 0.192 0.911 PB L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 5.77e-01 -0.118 0.211 0.911 PB L2
ENSG00000079739 PGM1 -556953 sc-eQTL 2.31e-01 -0.194 0.162 0.922 Pro_T L2
ENSG00000088035 ALG6 -331117 sc-eQTL 7.82e-01 -0.0457 0.165 0.922 Pro_T L2
ENSG00000116641 DOCK7 348072 sc-eQTL 1.79e-01 -0.223 0.165 0.922 Pro_T L2
ENSG00000125703 ATG4C 252326 sc-eQTL 5.35e-01 0.0899 0.145 0.922 Pro_T L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 2.46e-01 -0.169 0.145 0.922 Pro_T L2
ENSG00000162607 USP1 600161 sc-eQTL 3.05e-01 0.102 0.0997 0.922 Pro_T L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 7.08e-01 -0.0633 0.169 0.922 Pro_T L2
ENSG00000079739 PGM1 -556953 sc-eQTL 4.54e-01 0.129 0.172 0.923 Treg L2
ENSG00000088035 ALG6 -331117 sc-eQTL 6.60e-01 0.0811 0.184 0.923 Treg L2
ENSG00000116641 DOCK7 348072 sc-eQTL 7.91e-01 -0.0448 0.169 0.923 Treg L2
ENSG00000125703 ATG4C 252326 sc-eQTL 5.73e-01 -0.0973 0.173 0.923 Treg L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 8.03e-02 0.315 0.179 0.923 Treg L2
ENSG00000162607 USP1 600161 sc-eQTL 3.25e-01 -0.172 0.174 0.923 Treg L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 7.92e-01 0.0456 0.173 0.923 Treg L2
ENSG00000079739 PGM1 -556953 sc-eQTL 8.86e-01 -0.0251 0.174 0.929 cDC L2
ENSG00000088035 ALG6 -331117 sc-eQTL 7.00e-01 0.068 0.176 0.929 cDC L2
ENSG00000116641 DOCK7 348072 sc-eQTL 7.96e-01 -0.0447 0.173 0.929 cDC L2
ENSG00000125703 ATG4C 252326 sc-eQTL 1.11e-01 0.239 0.149 0.929 cDC L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 3.71e-01 -0.17 0.19 0.929 cDC L2
ENSG00000162607 USP1 600161 sc-eQTL 8.00e-01 -0.0429 0.169 0.929 cDC L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 9.99e-01 0.000239 0.153 0.929 cDC L2
ENSG00000079739 PGM1 -556953 sc-eQTL 5.26e-02 0.308 0.158 0.923 cMono_IL1B L2
ENSG00000088035 ALG6 -331117 sc-eQTL 1.87e-01 -0.21 0.159 0.923 cMono_IL1B L2
ENSG00000116641 DOCK7 348072 sc-eQTL 7.19e-01 -0.0605 0.168 0.923 cMono_IL1B L2
ENSG00000125703 ATG4C 252326 sc-eQTL 6.55e-01 0.0528 0.118 0.923 cMono_IL1B L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 6.57e-01 -0.0745 0.167 0.923 cMono_IL1B L2
ENSG00000162607 USP1 600161 sc-eQTL 1.78e-01 -0.199 0.147 0.923 cMono_IL1B L2
ENSG00000240563 L1TD1 841609 sc-eQTL 9.42e-02 0.248 0.147 0.923 cMono_IL1B L2
ENSG00000079739 PGM1 -556953 sc-eQTL 9.40e-01 0.0133 0.177 0.923 cMono_S100A L2
ENSG00000088035 ALG6 -331117 sc-eQTL 1.73e-01 0.245 0.179 0.923 cMono_S100A L2
ENSG00000116641 DOCK7 348072 sc-eQTL 8.12e-01 -0.0397 0.167 0.923 cMono_S100A L2
ENSG00000125703 ATG4C 252326 sc-eQTL 8.07e-01 -0.0354 0.144 0.923 cMono_S100A L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 3.75e-02 -0.337 0.161 0.923 cMono_S100A L2
ENSG00000162607 USP1 600161 sc-eQTL 7.69e-01 0.0494 0.168 0.923 cMono_S100A L2
ENSG00000240563 L1TD1 841609 sc-eQTL 2.94e-01 0.146 0.139 0.923 cMono_S100A L2
ENSG00000079739 PGM1 -556953 sc-eQTL 4.19e-01 0.162 0.199 0.93 gdT L2
ENSG00000088035 ALG6 -331117 sc-eQTL 1.56e-01 0.302 0.212 0.93 gdT L2
ENSG00000116641 DOCK7 348072 sc-eQTL 3.53e-01 -0.194 0.208 0.93 gdT L2
ENSG00000125703 ATG4C 252326 sc-eQTL 9.42e-03 0.513 0.195 0.93 gdT L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 6.31e-02 0.393 0.21 0.93 gdT L2
ENSG00000162607 USP1 600161 sc-eQTL 7.22e-01 -0.0715 0.201 0.93 gdT L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 1.67e-01 0.288 0.207 0.93 gdT L2
ENSG00000079739 PGM1 -556953 sc-eQTL 4.57e-01 0.134 0.18 0.92 intMono L2
ENSG00000088035 ALG6 -331117 sc-eQTL 4.73e-01 0.121 0.168 0.92 intMono L2
ENSG00000116641 DOCK7 348072 sc-eQTL 2.50e-01 0.198 0.171 0.92 intMono L2
ENSG00000125703 ATG4C 252326 sc-eQTL 4.12e-02 0.333 0.162 0.92 intMono L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 8.82e-01 -0.0268 0.181 0.92 intMono L2
ENSG00000162607 USP1 600161 sc-eQTL 6.83e-01 0.075 0.184 0.92 intMono L2
ENSG00000240563 L1TD1 841609 sc-eQTL 1.84e-01 -0.179 0.134 0.92 intMono L2
ENSG00000079739 PGM1 -556953 sc-eQTL 5.40e-01 0.0999 0.163 0.923 ncMono L2
ENSG00000088035 ALG6 -331117 sc-eQTL 5.03e-01 -0.12 0.179 0.923 ncMono L2
ENSG00000116641 DOCK7 348072 sc-eQTL 2.42e-01 0.206 0.176 0.923 ncMono L2
ENSG00000125703 ATG4C 252326 sc-eQTL 4.26e-01 0.131 0.164 0.923 ncMono L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 9.62e-01 0.00812 0.172 0.923 ncMono L2
ENSG00000162607 USP1 600161 sc-eQTL 7.20e-01 0.0631 0.176 0.923 ncMono L2
ENSG00000240563 L1TD1 841609 sc-eQTL 5.47e-01 0.0753 0.125 0.923 ncMono L2
ENSG00000079739 PGM1 -556953 sc-eQTL 7.85e-01 -0.0534 0.195 0.927 pDC L2
ENSG00000088035 ALG6 -331117 sc-eQTL 4.62e-01 0.14 0.19 0.927 pDC L2
ENSG00000116641 DOCK7 348072 sc-eQTL 7.71e-01 -0.0567 0.194 0.927 pDC L2
ENSG00000125703 ATG4C 252326 sc-eQTL 2.89e-01 0.185 0.174 0.927 pDC L2
ENSG00000142856 ITGB3BP -557263 sc-eQTL 9.57e-01 -0.0107 0.196 0.927 pDC L2
ENSG00000162607 USP1 600161 sc-eQTL 9.89e-01 0.00275 0.199 0.927 pDC L2
ENSG00000203965 EFCAB7 -486914 sc-eQTL 4.49e-01 0.131 0.173 0.927 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -556953 sc-eQTL 6.05e-01 -0.0896 0.173 0.923 B_Memory LOneK1K
ENSG00000088035 ALG6 -331117 sc-eQTL 5.27e-01 0.121 0.191 0.923 B_Memory LOneK1K
ENSG00000116641 DOCK7 348072 sc-eQTL 6.50e-01 -0.0755 0.166 0.923 B_Memory LOneK1K
ENSG00000125703 ATG4C 252326 sc-eQTL 3.15e-01 0.135 0.134 0.923 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -557263 sc-eQTL 6.17e-02 0.329 0.175 0.923 B_Memory LOneK1K
ENSG00000162607 USP1 600161 sc-eQTL 4.01e-01 -0.144 0.171 0.923 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -486914 sc-eQTL 3.20e-01 -0.183 0.184 0.923 B_Memory LOneK1K
ENSG00000079739 PGM1 -556953 sc-eQTL 3.29e-01 -0.172 0.176 0.923 B_Naive LOneK1K
ENSG00000088035 ALG6 -331117 sc-eQTL 8.54e-01 -0.0335 0.181 0.923 B_Naive LOneK1K
ENSG00000116641 DOCK7 348072 sc-eQTL 8.18e-02 -0.294 0.168 0.923 B_Naive LOneK1K
ENSG00000125703 ATG4C 252326 sc-eQTL 1.97e-01 -0.166 0.129 0.923 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -557263 sc-eQTL 2.31e-01 -0.218 0.182 0.923 B_Naive LOneK1K
ENSG00000162607 USP1 600161 sc-eQTL 6.14e-01 -0.0792 0.157 0.923 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -486914 sc-eQTL 1.45e-01 -0.267 0.183 0.923 B_Naive LOneK1K
ENSG00000079739 PGM1 -556953 sc-eQTL 1.57e-01 0.231 0.162 0.923 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -331117 sc-eQTL 8.29e-01 -0.0343 0.158 0.923 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 348072 sc-eQTL 6.58e-01 -0.0704 0.159 0.923 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 252326 sc-eQTL 9.49e-01 -0.007 0.11 0.923 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -557263 sc-eQTL 1.24e-01 -0.25 0.162 0.923 CD14_Mono LOneK1K
ENSG00000162607 USP1 600161 sc-eQTL 3.90e-01 -0.12 0.139 0.923 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 841609 sc-eQTL 1.46e-01 0.219 0.15 0.923 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -556953 sc-eQTL 3.90e-01 0.135 0.157 0.922 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -331117 sc-eQTL 7.80e-01 0.0498 0.178 0.922 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 348072 sc-eQTL 4.20e-02 0.357 0.175 0.922 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 252326 sc-eQTL 4.61e-01 0.111 0.15 0.922 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -557263 sc-eQTL 8.10e-01 -0.042 0.175 0.922 CD16_Mono LOneK1K
ENSG00000162607 USP1 600161 sc-eQTL 3.86e-01 0.142 0.164 0.922 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 841609 sc-eQTL 9.16e-01 -0.0118 0.112 0.922 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -556953 sc-eQTL 6.26e-01 0.0657 0.134 0.925 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -331117 sc-eQTL 6.65e-01 -0.0701 0.162 0.925 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 348072 sc-eQTL 4.34e-01 0.113 0.145 0.925 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 252326 sc-eQTL 6.49e-01 -0.0659 0.144 0.925 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -557263 sc-eQTL 3.41e-01 -0.163 0.171 0.925 NK_CD56dim LOneK1K
ENSG00000162607 USP1 600161 sc-eQTL 1.94e-02 0.362 0.153 0.925 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -486914 sc-eQTL 7.42e-01 0.0622 0.189 0.925 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 -331117 eQTL 0.00191 0.0693 0.0223 0.00658 0.00261 0.0996
ENSG00000116641 DOCK7 348090 eQTL 0.0184 -0.0879 0.0372 0.0 0.0 0.0996
ENSG00000142856 ITGB3BP -557263 eQTL 0.00125 0.159 0.0492 0.0 0.0 0.0996

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina