logo

Genes within 1Mb (chr1:63021021:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -572390 sc-eQTL 9.00e-01 0.0104 0.0826 0.318 B L1
ENSG00000088035 ALG6 -346554 sc-eQTL 6.80e-01 0.0353 0.0855 0.318 B L1
ENSG00000116641 DOCK7 332635 sc-eQTL 6.93e-02 -0.155 0.0849 0.318 B L1
ENSG00000125703 ATG4C 236889 sc-eQTL 5.88e-01 -0.0323 0.0594 0.318 B L1
ENSG00000142856 ITGB3BP -572700 sc-eQTL 8.85e-01 -0.0137 0.0947 0.318 B L1
ENSG00000162607 USP1 584724 sc-eQTL 2.75e-01 -0.0896 0.0819 0.318 B L1
ENSG00000203965 EFCAB7 -502351 sc-eQTL 4.31e-01 -0.0764 0.0968 0.318 B L1
ENSG00000079739 PGM1 -572390 sc-eQTL 5.75e-01 -0.0401 0.0713 0.318 CD4T L1
ENSG00000088035 ALG6 -346554 sc-eQTL 9.31e-01 -0.00686 0.0787 0.318 CD4T L1
ENSG00000116641 DOCK7 332635 sc-eQTL 9.56e-01 0.00438 0.0797 0.318 CD4T L1
ENSG00000125703 ATG4C 236889 sc-eQTL 4.53e-01 -0.0483 0.0643 0.318 CD4T L1
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.84e-01 -0.00179 0.0914 0.318 CD4T L1
ENSG00000162607 USP1 584724 sc-eQTL 3.99e-01 -0.0526 0.0623 0.318 CD4T L1
ENSG00000203965 EFCAB7 -502351 sc-eQTL 4.43e-01 -0.063 0.0819 0.318 CD4T L1
ENSG00000079739 PGM1 -572390 sc-eQTL 4.36e-01 -0.0608 0.0779 0.318 CD8T L1
ENSG00000088035 ALG6 -346554 sc-eQTL 3.07e-01 0.0878 0.0857 0.318 CD8T L1
ENSG00000116641 DOCK7 332635 sc-eQTL 2.96e-01 -0.091 0.0868 0.318 CD8T L1
ENSG00000125703 ATG4C 236889 sc-eQTL 7.24e-01 -0.0292 0.0827 0.318 CD8T L1
ENSG00000142856 ITGB3BP -572700 sc-eQTL 8.92e-01 -0.0126 0.0925 0.318 CD8T L1
ENSG00000162607 USP1 584724 sc-eQTL 9.47e-01 0.00478 0.0721 0.318 CD8T L1
ENSG00000203965 EFCAB7 -502351 sc-eQTL 9.48e-01 -0.00601 0.0922 0.318 CD8T L1
ENSG00000079739 PGM1 -572390 sc-eQTL 3.02e-01 0.0904 0.0873 0.322 DC L1
ENSG00000088035 ALG6 -346554 sc-eQTL 8.22e-01 -0.0203 0.0904 0.322 DC L1
ENSG00000116641 DOCK7 332635 sc-eQTL 2.75e-01 0.101 0.0924 0.322 DC L1
ENSG00000125703 ATG4C 236889 sc-eQTL 5.00e-01 0.0489 0.0724 0.322 DC L1
ENSG00000142856 ITGB3BP -572700 sc-eQTL 5.57e-01 -0.0595 0.101 0.322 DC L1
ENSG00000162607 USP1 584724 sc-eQTL 6.46e-01 -0.0407 0.0884 0.322 DC L1
ENSG00000203965 EFCAB7 -502351 sc-eQTL 3.90e-01 0.0759 0.088 0.322 DC L1
ENSG00000079739 PGM1 -572390 sc-eQTL 8.87e-01 -0.0123 0.0861 0.318 Mono L1
ENSG00000088035 ALG6 -346554 sc-eQTL 8.50e-01 -0.017 0.0899 0.318 Mono L1
ENSG00000116641 DOCK7 332635 sc-eQTL 3.30e-01 0.0848 0.0867 0.318 Mono L1
ENSG00000125703 ATG4C 236889 sc-eQTL 7.00e-01 0.0226 0.0587 0.318 Mono L1
ENSG00000142856 ITGB3BP -572700 sc-eQTL 3.94e-01 0.0791 0.0927 0.318 Mono L1
ENSG00000162607 USP1 584724 sc-eQTL 6.83e-01 -0.0312 0.0762 0.318 Mono L1
ENSG00000240563 L1TD1 826172 sc-eQTL 6.29e-01 0.0345 0.0711 0.318 Mono L1
ENSG00000079739 PGM1 -572390 sc-eQTL 9.72e-01 -0.00255 0.0731 0.318 NK L1
ENSG00000088035 ALG6 -346554 sc-eQTL 2.19e-01 0.105 0.0854 0.318 NK L1
ENSG00000116641 DOCK7 332635 sc-eQTL 3.19e-01 -0.0704 0.0704 0.318 NK L1
ENSG00000125703 ATG4C 236889 sc-eQTL 3.53e-02 -0.159 0.075 0.318 NK L1
ENSG00000142856 ITGB3BP -572700 sc-eQTL 6.94e-01 -0.0371 0.0942 0.318 NK L1
ENSG00000162607 USP1 584724 sc-eQTL 9.21e-01 0.00836 0.0842 0.318 NK L1
ENSG00000203965 EFCAB7 -502351 sc-eQTL 2.49e-01 0.118 0.102 0.318 NK L1
ENSG00000079739 PGM1 -572390 sc-eQTL 2.53e-01 0.0947 0.0826 0.318 Other_T L1
ENSG00000088035 ALG6 -346554 sc-eQTL 3.35e-01 -0.0802 0.0831 0.318 Other_T L1
ENSG00000116641 DOCK7 332635 sc-eQTL 9.18e-01 -0.00875 0.085 0.318 Other_T L1
ENSG00000125703 ATG4C 236889 sc-eQTL 2.14e-01 -0.0914 0.0733 0.318 Other_T L1
ENSG00000142856 ITGB3BP -572700 sc-eQTL 6.29e-01 -0.0316 0.0652 0.318 Other_T L1
ENSG00000162607 USP1 584724 sc-eQTL 5.69e-01 0.0322 0.0565 0.318 Other_T L1
ENSG00000203965 EFCAB7 -502351 sc-eQTL 5.34e-01 0.0627 0.101 0.318 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -572390 sc-eQTL 4.46e-01 -0.0841 0.11 0.324 B_Activated L2
ENSG00000088035 ALG6 -346554 sc-eQTL 7.02e-02 0.191 0.105 0.324 B_Activated L2
ENSG00000116641 DOCK7 332635 sc-eQTL 9.48e-01 0.00643 0.0985 0.324 B_Activated L2
ENSG00000125703 ATG4C 236889 sc-eQTL 2.69e-03 0.307 0.101 0.324 B_Activated L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 7.72e-01 -0.0294 0.101 0.324 B_Activated L2
ENSG00000162607 USP1 584724 sc-eQTL 9.44e-01 0.0077 0.11 0.324 B_Activated L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 6.13e-01 -0.0486 0.0958 0.324 B_Activated L2
ENSG00000079739 PGM1 -572390 sc-eQTL 8.52e-01 -0.0185 0.0987 0.318 B_Intermediate L2
ENSG00000088035 ALG6 -346554 sc-eQTL 5.04e-01 0.067 0.1 0.318 B_Intermediate L2
ENSG00000116641 DOCK7 332635 sc-eQTL 5.65e-02 -0.182 0.095 0.318 B_Intermediate L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.28e-02 -0.201 0.0799 0.318 B_Intermediate L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.09e-01 0.0111 0.0966 0.318 B_Intermediate L2
ENSG00000162607 USP1 584724 sc-eQTL 1.01e-01 0.158 0.0958 0.318 B_Intermediate L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 8.42e-01 0.0191 0.0957 0.318 B_Intermediate L2
ENSG00000079739 PGM1 -572390 sc-eQTL 8.41e-01 -0.0193 0.0964 0.321 B_Memory L2
ENSG00000088035 ALG6 -346554 sc-eQTL 7.25e-01 0.0345 0.098 0.321 B_Memory L2
ENSG00000116641 DOCK7 332635 sc-eQTL 9.75e-01 0.00284 0.092 0.321 B_Memory L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.40e-01 0.129 0.087 0.321 B_Memory L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.90e-01 0.00123 0.1 0.321 B_Memory L2
ENSG00000162607 USP1 584724 sc-eQTL 8.63e-01 -0.0174 0.101 0.321 B_Memory L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 1.19e-01 0.154 0.0987 0.321 B_Memory L2
ENSG00000079739 PGM1 -572390 sc-eQTL 8.55e-01 0.0178 0.0972 0.318 B_Naive1 L2
ENSG00000088035 ALG6 -346554 sc-eQTL 7.60e-01 -0.0298 0.0976 0.318 B_Naive1 L2
ENSG00000116641 DOCK7 332635 sc-eQTL 3.65e-01 -0.0847 0.0933 0.318 B_Naive1 L2
ENSG00000125703 ATG4C 236889 sc-eQTL 6.15e-01 0.0362 0.072 0.318 B_Naive1 L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 2.55e-01 -0.109 0.0953 0.318 B_Naive1 L2
ENSG00000162607 USP1 584724 sc-eQTL 3.76e-02 -0.174 0.0832 0.318 B_Naive1 L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 5.64e-02 -0.194 0.101 0.318 B_Naive1 L2
ENSG00000079739 PGM1 -572390 sc-eQTL 8.08e-01 0.0237 0.0971 0.32 B_Naive2 L2
ENSG00000088035 ALG6 -346554 sc-eQTL 8.24e-01 -0.0225 0.101 0.32 B_Naive2 L2
ENSG00000116641 DOCK7 332635 sc-eQTL 8.14e-01 -0.0229 0.0974 0.32 B_Naive2 L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.66e-01 -0.13 0.0933 0.32 B_Naive2 L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 2.30e-01 0.122 0.101 0.32 B_Naive2 L2
ENSG00000162607 USP1 584724 sc-eQTL 5.89e-01 0.0523 0.0967 0.32 B_Naive2 L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 9.46e-01 0.00688 0.101 0.32 B_Naive2 L2
ENSG00000079739 PGM1 -572390 sc-eQTL 9.69e-02 0.161 0.0964 0.32 CD4_CTL L2
ENSG00000088035 ALG6 -346554 sc-eQTL 3.67e-01 -0.0926 0.102 0.32 CD4_CTL L2
ENSG00000116641 DOCK7 332635 sc-eQTL 5.26e-01 -0.0569 0.0896 0.32 CD4_CTL L2
ENSG00000125703 ATG4C 236889 sc-eQTL 3.26e-01 -0.0911 0.0926 0.32 CD4_CTL L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 5.89e-01 0.0537 0.0992 0.32 CD4_CTL L2
ENSG00000162607 USP1 584724 sc-eQTL 5.17e-01 0.0613 0.0944 0.32 CD4_CTL L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 1.31e-01 0.142 0.0938 0.32 CD4_CTL L2
ENSG00000079739 PGM1 -572390 sc-eQTL 4.13e-01 -0.0653 0.0796 0.318 CD4_Naive L2
ENSG00000088035 ALG6 -346554 sc-eQTL 8.42e-01 0.0172 0.0865 0.318 CD4_Naive L2
ENSG00000116641 DOCK7 332635 sc-eQTL 8.88e-01 -0.0119 0.0851 0.318 CD4_Naive L2
ENSG00000125703 ATG4C 236889 sc-eQTL 7.37e-01 0.0253 0.0752 0.318 CD4_Naive L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.45e-01 0.00631 0.0919 0.318 CD4_Naive L2
ENSG00000162607 USP1 584724 sc-eQTL 2.27e-01 -0.0848 0.07 0.318 CD4_Naive L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 4.15e-01 -0.0744 0.0911 0.318 CD4_Naive L2
ENSG00000079739 PGM1 -572390 sc-eQTL 7.42e-01 -0.0273 0.0828 0.318 CD4_TCM L2
ENSG00000088035 ALG6 -346554 sc-eQTL 7.36e-01 -0.0324 0.0962 0.318 CD4_TCM L2
ENSG00000116641 DOCK7 332635 sc-eQTL 1.67e-01 0.118 0.0848 0.318 CD4_TCM L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.02e-01 -0.135 0.0825 0.318 CD4_TCM L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 8.89e-01 0.0137 0.0978 0.318 CD4_TCM L2
ENSG00000162607 USP1 584724 sc-eQTL 9.69e-01 -0.00312 0.0802 0.318 CD4_TCM L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 5.85e-01 0.0518 0.0946 0.318 CD4_TCM L2
ENSG00000079739 PGM1 -572390 sc-eQTL 5.40e-01 0.0593 0.0965 0.318 CD4_TEM L2
ENSG00000088035 ALG6 -346554 sc-eQTL 9.18e-01 -0.01 0.0971 0.318 CD4_TEM L2
ENSG00000116641 DOCK7 332635 sc-eQTL 2.17e-01 -0.117 0.0943 0.318 CD4_TEM L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.42e-01 -0.135 0.0915 0.318 CD4_TEM L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 7.35e-01 -0.0322 0.0949 0.318 CD4_TEM L2
ENSG00000162607 USP1 584724 sc-eQTL 1.85e-01 -0.119 0.0895 0.318 CD4_TEM L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 2.94e-01 -0.103 0.0981 0.318 CD4_TEM L2
ENSG00000079739 PGM1 -572390 sc-eQTL 5.37e-01 0.0553 0.0895 0.318 CD8_CTL L2
ENSG00000088035 ALG6 -346554 sc-eQTL 8.18e-01 0.0219 0.0952 0.318 CD8_CTL L2
ENSG00000116641 DOCK7 332635 sc-eQTL 9.56e-01 -0.00504 0.0904 0.318 CD8_CTL L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.86e-01 -0.127 0.0958 0.318 CD8_CTL L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.71e-01 -0.00368 0.1 0.318 CD8_CTL L2
ENSG00000162607 USP1 584724 sc-eQTL 9.09e-01 0.0103 0.0896 0.318 CD8_CTL L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 6.66e-01 -0.0443 0.102 0.318 CD8_CTL L2
ENSG00000079739 PGM1 -572390 sc-eQTL 9.68e-02 -0.149 0.0894 0.318 CD8_Naive L2
ENSG00000088035 ALG6 -346554 sc-eQTL 5.56e-01 0.0548 0.0931 0.318 CD8_Naive L2
ENSG00000116641 DOCK7 332635 sc-eQTL 6.09e-03 -0.262 0.0946 0.318 CD8_Naive L2
ENSG00000125703 ATG4C 236889 sc-eQTL 7.02e-02 -0.167 0.0917 0.318 CD8_Naive L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 4.40e-01 -0.0723 0.0935 0.318 CD8_Naive L2
ENSG00000162607 USP1 584724 sc-eQTL 9.55e-01 0.00444 0.0791 0.318 CD8_Naive L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 9.70e-01 0.00327 0.0882 0.318 CD8_Naive L2
ENSG00000079739 PGM1 -572390 sc-eQTL 7.50e-01 0.0322 0.101 0.31 CD8_TCM L2
ENSG00000088035 ALG6 -346554 sc-eQTL 3.13e-01 0.103 0.102 0.31 CD8_TCM L2
ENSG00000116641 DOCK7 332635 sc-eQTL 6.18e-01 -0.0498 0.0995 0.31 CD8_TCM L2
ENSG00000125703 ATG4C 236889 sc-eQTL 9.62e-01 -0.00483 0.102 0.31 CD8_TCM L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 5.75e-01 -0.0555 0.0989 0.31 CD8_TCM L2
ENSG00000162607 USP1 584724 sc-eQTL 8.82e-01 0.0142 0.0953 0.31 CD8_TCM L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 2.51e-01 -0.116 0.101 0.31 CD8_TCM L2
ENSG00000079739 PGM1 -572390 sc-eQTL 2.50e-01 0.116 0.1 0.313 CD8_TEM L2
ENSG00000088035 ALG6 -346554 sc-eQTL 7.71e-01 0.0295 0.101 0.313 CD8_TEM L2
ENSG00000116641 DOCK7 332635 sc-eQTL 2.20e-01 -0.12 0.0977 0.313 CD8_TEM L2
ENSG00000125703 ATG4C 236889 sc-eQTL 2.30e-01 0.113 0.094 0.313 CD8_TEM L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 7.58e-01 -0.0316 0.102 0.313 CD8_TEM L2
ENSG00000162607 USP1 584724 sc-eQTL 7.53e-01 0.0307 0.0974 0.313 CD8_TEM L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 3.62e-01 -0.0903 0.0988 0.313 CD8_TEM L2
ENSG00000079739 PGM1 -572390 sc-eQTL 7.98e-01 0.0245 0.0956 0.32 MAIT L2
ENSG00000088035 ALG6 -346554 sc-eQTL 2.01e-02 -0.219 0.0934 0.32 MAIT L2
ENSG00000116641 DOCK7 332635 sc-eQTL 6.12e-01 -0.046 0.0907 0.32 MAIT L2
ENSG00000125703 ATG4C 236889 sc-eQTL 5.14e-02 -0.186 0.0948 0.32 MAIT L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 4.71e-01 -0.069 0.0957 0.32 MAIT L2
ENSG00000162607 USP1 584724 sc-eQTL 5.92e-01 0.051 0.095 0.32 MAIT L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 6.33e-01 0.0472 0.0986 0.32 MAIT L2
ENSG00000079739 PGM1 -572390 sc-eQTL 2.97e-01 -0.102 0.0973 0.313 NK_CD56bright L2
ENSG00000088035 ALG6 -346554 sc-eQTL 9.48e-01 0.00657 0.1 0.313 NK_CD56bright L2
ENSG00000116641 DOCK7 332635 sc-eQTL 6.44e-01 0.0401 0.0866 0.313 NK_CD56bright L2
ENSG00000125703 ATG4C 236889 sc-eQTL 4.46e-01 -0.0738 0.0967 0.313 NK_CD56bright L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 7.20e-01 -0.0362 0.101 0.313 NK_CD56bright L2
ENSG00000162607 USP1 584724 sc-eQTL 6.03e-01 -0.0541 0.104 0.313 NK_CD56bright L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 2.45e-01 0.116 0.0991 0.313 NK_CD56bright L2
ENSG00000079739 PGM1 -572390 sc-eQTL 9.85e-01 -0.00148 0.0759 0.317 NK_CD56dim L2
ENSG00000088035 ALG6 -346554 sc-eQTL 8.94e-01 -0.0128 0.0963 0.317 NK_CD56dim L2
ENSG00000116641 DOCK7 332635 sc-eQTL 2.42e-02 -0.188 0.0828 0.317 NK_CD56dim L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.33e-01 -0.128 0.0847 0.317 NK_CD56dim L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 6.40e-01 -0.0454 0.0968 0.317 NK_CD56dim L2
ENSG00000162607 USP1 584724 sc-eQTL 4.67e-01 0.0684 0.0939 0.317 NK_CD56dim L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 8.39e-01 0.0213 0.105 0.317 NK_CD56dim L2
ENSG00000079739 PGM1 -572390 sc-eQTL 9.27e-01 -0.00954 0.104 0.317 NK_HLA L2
ENSG00000088035 ALG6 -346554 sc-eQTL 1.99e-01 0.138 0.107 0.317 NK_HLA L2
ENSG00000116641 DOCK7 332635 sc-eQTL 3.13e-01 0.0832 0.0823 0.317 NK_HLA L2
ENSG00000125703 ATG4C 236889 sc-eQTL 3.42e-01 -0.0912 0.0957 0.317 NK_HLA L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 4.67e-01 0.0734 0.101 0.317 NK_HLA L2
ENSG00000162607 USP1 584724 sc-eQTL 9.37e-01 -0.00833 0.105 0.317 NK_HLA L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 5.52e-01 0.0571 0.0958 0.317 NK_HLA L2
ENSG00000079739 PGM1 -572390 sc-eQTL 6.64e-01 0.0362 0.0831 0.317 NK_cytokine L2
ENSG00000088035 ALG6 -346554 sc-eQTL 4.34e-02 0.189 0.0931 0.317 NK_cytokine L2
ENSG00000116641 DOCK7 332635 sc-eQTL 2.03e-01 -0.111 0.0867 0.317 NK_cytokine L2
ENSG00000125703 ATG4C 236889 sc-eQTL 1.21e-01 -0.138 0.0885 0.317 NK_cytokine L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 2.40e-01 -0.108 0.0919 0.317 NK_cytokine L2
ENSG00000162607 USP1 584724 sc-eQTL 8.10e-01 -0.0234 0.097 0.317 NK_cytokine L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 5.85e-01 0.0537 0.0982 0.317 NK_cytokine L2
ENSG00000079739 PGM1 -572390 sc-eQTL 9.71e-01 0.0045 0.122 0.311 PB L2
ENSG00000088035 ALG6 -346554 sc-eQTL 5.72e-01 0.0723 0.128 0.311 PB L2
ENSG00000116641 DOCK7 332635 sc-eQTL 7.14e-01 -0.0502 0.137 0.311 PB L2
ENSG00000125703 ATG4C 236889 sc-eQTL 3.72e-01 0.106 0.119 0.311 PB L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 8.38e-01 0.0244 0.119 0.311 PB L2
ENSG00000162607 USP1 584724 sc-eQTL 5.15e-01 0.0772 0.118 0.311 PB L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 8.19e-01 0.03 0.131 0.311 PB L2
ENSG00000079739 PGM1 -572390 sc-eQTL 4.28e-01 0.0719 0.0905 0.317 Pro_T L2
ENSG00000088035 ALG6 -346554 sc-eQTL 8.74e-01 0.0146 0.0922 0.317 Pro_T L2
ENSG00000116641 DOCK7 332635 sc-eQTL 3.46e-01 -0.0873 0.0924 0.317 Pro_T L2
ENSG00000125703 ATG4C 236889 sc-eQTL 5.76e-01 0.0453 0.081 0.317 Pro_T L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.61e-01 -0.00399 0.0813 0.317 Pro_T L2
ENSG00000162607 USP1 584724 sc-eQTL 9.42e-01 0.00407 0.0559 0.317 Pro_T L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 5.96e-01 -0.0501 0.0944 0.317 Pro_T L2
ENSG00000079739 PGM1 -572390 sc-eQTL 5.74e-01 -0.0537 0.0953 0.318 Treg L2
ENSG00000088035 ALG6 -346554 sc-eQTL 4.62e-01 -0.075 0.102 0.318 Treg L2
ENSG00000116641 DOCK7 332635 sc-eQTL 4.78e-01 -0.0664 0.0935 0.318 Treg L2
ENSG00000125703 ATG4C 236889 sc-eQTL 4.13e-01 -0.0783 0.0955 0.318 Treg L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 8.00e-01 -0.0253 0.1 0.318 Treg L2
ENSG00000162607 USP1 584724 sc-eQTL 6.55e-01 0.0433 0.0968 0.318 Treg L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 1.65e-01 0.133 0.0954 0.318 Treg L2
ENSG00000079739 PGM1 -572390 sc-eQTL 2.48e-01 0.11 0.0951 0.327 cDC L2
ENSG00000088035 ALG6 -346554 sc-eQTL 5.76e-01 0.0541 0.0967 0.327 cDC L2
ENSG00000116641 DOCK7 332635 sc-eQTL 9.73e-01 0.00317 0.095 0.327 cDC L2
ENSG00000125703 ATG4C 236889 sc-eQTL 7.24e-01 -0.0291 0.0825 0.327 cDC L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 2.89e-01 -0.111 0.104 0.327 cDC L2
ENSG00000162607 USP1 584724 sc-eQTL 3.16e-01 -0.0934 0.0928 0.327 cDC L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 8.26e-01 -0.0185 0.084 0.327 cDC L2
ENSG00000079739 PGM1 -572390 sc-eQTL 9.11e-01 0.0101 0.0899 0.318 cMono_IL1B L2
ENSG00000088035 ALG6 -346554 sc-eQTL 9.97e-01 0.000332 0.09 0.318 cMono_IL1B L2
ENSG00000116641 DOCK7 332635 sc-eQTL 1.67e-01 0.131 0.0945 0.318 cMono_IL1B L2
ENSG00000125703 ATG4C 236889 sc-eQTL 2.86e-01 -0.0712 0.0666 0.318 cMono_IL1B L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.75e-01 -0.00293 0.0945 0.318 cMono_IL1B L2
ENSG00000162607 USP1 584724 sc-eQTL 2.49e-01 -0.0961 0.0831 0.318 cMono_IL1B L2
ENSG00000240563 L1TD1 826172 sc-eQTL 8.21e-01 0.0189 0.0838 0.318 cMono_IL1B L2
ENSG00000079739 PGM1 -572390 sc-eQTL 6.84e-01 0.0409 0.1 0.318 cMono_S100A L2
ENSG00000088035 ALG6 -346554 sc-eQTL 1.08e-01 -0.164 0.101 0.318 cMono_S100A L2
ENSG00000116641 DOCK7 332635 sc-eQTL 4.18e-01 -0.0765 0.0943 0.318 cMono_S100A L2
ENSG00000125703 ATG4C 236889 sc-eQTL 2.12e-01 0.102 0.0814 0.318 cMono_S100A L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 1.20e-01 0.143 0.0917 0.318 cMono_S100A L2
ENSG00000162607 USP1 584724 sc-eQTL 8.23e-01 0.0213 0.0949 0.318 cMono_S100A L2
ENSG00000240563 L1TD1 826172 sc-eQTL 8.38e-01 -0.0162 0.079 0.318 cMono_S100A L2
ENSG00000079739 PGM1 -572390 sc-eQTL 5.18e-01 -0.0726 0.112 0.324 gdT L2
ENSG00000088035 ALG6 -346554 sc-eQTL 6.87e-01 -0.0483 0.12 0.324 gdT L2
ENSG00000116641 DOCK7 332635 sc-eQTL 8.33e-01 -0.0248 0.117 0.324 gdT L2
ENSG00000125703 ATG4C 236889 sc-eQTL 4.78e-01 -0.0797 0.112 0.324 gdT L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 7.50e-01 -0.038 0.119 0.324 gdT L2
ENSG00000162607 USP1 584724 sc-eQTL 7.07e-01 -0.0424 0.113 0.324 gdT L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 4.45e-01 0.0897 0.117 0.324 gdT L2
ENSG00000079739 PGM1 -572390 sc-eQTL 8.97e-01 0.0131 0.101 0.318 intMono L2
ENSG00000088035 ALG6 -346554 sc-eQTL 7.19e-02 0.169 0.0934 0.318 intMono L2
ENSG00000116641 DOCK7 332635 sc-eQTL 2.04e-01 0.122 0.0958 0.318 intMono L2
ENSG00000125703 ATG4C 236889 sc-eQTL 6.43e-01 0.0427 0.0918 0.318 intMono L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 9.07e-01 0.0119 0.101 0.318 intMono L2
ENSG00000162607 USP1 584724 sc-eQTL 7.06e-01 0.0389 0.103 0.318 intMono L2
ENSG00000240563 L1TD1 826172 sc-eQTL 2.13e-01 0.0942 0.0754 0.318 intMono L2
ENSG00000079739 PGM1 -572390 sc-eQTL 9.74e-01 0.00309 0.0937 0.312 ncMono L2
ENSG00000088035 ALG6 -346554 sc-eQTL 2.50e-01 0.118 0.103 0.312 ncMono L2
ENSG00000116641 DOCK7 332635 sc-eQTL 7.66e-01 -0.0301 0.101 0.312 ncMono L2
ENSG00000125703 ATG4C 236889 sc-eQTL 6.91e-01 0.0377 0.0946 0.312 ncMono L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 1.71e-01 0.136 0.0986 0.312 ncMono L2
ENSG00000162607 USP1 584724 sc-eQTL 9.86e-01 -0.00179 0.101 0.312 ncMono L2
ENSG00000240563 L1TD1 826172 sc-eQTL 6.15e-01 0.0362 0.0717 0.312 ncMono L2
ENSG00000079739 PGM1 -572390 sc-eQTL 2.22e-01 0.131 0.107 0.331 pDC L2
ENSG00000088035 ALG6 -346554 sc-eQTL 4.89e-01 -0.0725 0.105 0.331 pDC L2
ENSG00000116641 DOCK7 332635 sc-eQTL 9.69e-02 0.177 0.106 0.331 pDC L2
ENSG00000125703 ATG4C 236889 sc-eQTL 5.78e-01 0.0534 0.0958 0.331 pDC L2
ENSG00000142856 ITGB3BP -572700 sc-eQTL 4.26e-01 -0.0857 0.107 0.331 pDC L2
ENSG00000162607 USP1 584724 sc-eQTL 9.25e-01 -0.0104 0.11 0.331 pDC L2
ENSG00000203965 EFCAB7 -502351 sc-eQTL 2.28e-01 0.115 0.0949 0.331 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -572390 sc-eQTL 8.13e-01 0.0216 0.0915 0.318 B_Memory LOneK1K
ENSG00000088035 ALG6 -346554 sc-eQTL 1.49e-01 0.146 0.101 0.318 B_Memory LOneK1K
ENSG00000116641 DOCK7 332635 sc-eQTL 4.80e-02 -0.173 0.087 0.318 B_Memory LOneK1K
ENSG00000125703 ATG4C 236889 sc-eQTL 4.60e-01 -0.0525 0.0709 0.318 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -572700 sc-eQTL 8.63e-01 -0.0161 0.0932 0.318 B_Memory LOneK1K
ENSG00000162607 USP1 584724 sc-eQTL 1.81e-01 0.121 0.0901 0.318 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -502351 sc-eQTL 8.88e-01 0.0137 0.0972 0.318 B_Memory LOneK1K
ENSG00000079739 PGM1 -572390 sc-eQTL 7.01e-01 0.0366 0.0951 0.318 B_Naive LOneK1K
ENSG00000088035 ALG6 -346554 sc-eQTL 6.23e-01 -0.0482 0.0979 0.318 B_Naive LOneK1K
ENSG00000116641 DOCK7 332635 sc-eQTL 2.83e-01 -0.0982 0.0912 0.318 B_Naive LOneK1K
ENSG00000125703 ATG4C 236889 sc-eQTL 5.15e-01 -0.0454 0.0697 0.318 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -572700 sc-eQTL 8.12e-01 -0.0235 0.0986 0.318 B_Naive LOneK1K
ENSG00000162607 USP1 584724 sc-eQTL 1.12e-01 -0.135 0.0842 0.318 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -502351 sc-eQTL 1.70e-01 -0.136 0.0987 0.318 B_Naive LOneK1K
ENSG00000079739 PGM1 -572390 sc-eQTL 9.71e-01 0.0034 0.0926 0.318 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -346554 sc-eQTL 5.26e-01 -0.0569 0.0896 0.318 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 332635 sc-eQTL 4.51e-01 0.0681 0.0901 0.318 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 236889 sc-eQTL 8.69e-01 -0.0103 0.0624 0.318 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -572700 sc-eQTL 4.65e-01 0.0675 0.0922 0.318 CD14_Mono LOneK1K
ENSG00000162607 USP1 584724 sc-eQTL 9.05e-01 -0.00943 0.0789 0.318 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 826172 sc-eQTL 9.13e-01 -0.00931 0.0855 0.318 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -572390 sc-eQTL 7.23e-01 0.0313 0.088 0.319 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -346554 sc-eQTL 2.01e-01 0.128 0.0996 0.319 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 332635 sc-eQTL 1.04e-01 0.16 0.0983 0.319 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 236889 sc-eQTL 4.37e-01 0.0656 0.0842 0.319 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -572700 sc-eQTL 5.45e-01 0.0594 0.0978 0.319 CD16_Mono LOneK1K
ENSG00000162607 USP1 584724 sc-eQTL 3.27e-01 0.0901 0.0918 0.319 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 826172 sc-eQTL 2.58e-01 0.071 0.0626 0.319 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -572390 sc-eQTL 7.00e-01 0.0285 0.0739 0.317 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -346554 sc-eQTL 2.74e-01 0.0972 0.0886 0.317 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 332635 sc-eQTL 5.72e-02 -0.151 0.0789 0.317 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 236889 sc-eQTL 3.79e-02 -0.164 0.0786 0.317 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -572700 sc-eQTL 6.41e-01 -0.044 0.0941 0.317 NK_CD56dim LOneK1K
ENSG00000162607 USP1 584724 sc-eQTL 5.90e-01 0.046 0.0854 0.317 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -502351 sc-eQTL 3.83e-01 0.0907 0.104 0.317 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 \N -346554 1.26e-06 9.44e-07 3.25e-07 3.5e-07 2.58e-07 4.35e-07 9.74e-07 3.25e-07 1.13e-06 3.76e-07 1.25e-06 6.19e-07 1.54e-06 2.54e-07 4.36e-07 6.94e-07 7.7e-07 5.71e-07 4.95e-07 6.07e-07 3.8e-07 9.92e-07 7.08e-07 5.76e-07 1.69e-06 2.89e-07 6.16e-07 5.44e-07 8.97e-07 1.04e-06 4.65e-07 1.18e-07 2.17e-07 4.57e-07 4.15e-07 3.94e-07 3.79e-07 1.24e-07 1.73e-07 7.62e-08 2.75e-07 1.15e-06 5.53e-08 1.26e-08 1.87e-07 7.7e-08 2.33e-07 8.73e-08 9.51e-08