logo

Genes within 1Mb (chr1:63012229:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -581182 sc-eQTL 5.93e-01 -0.0748 0.14 0.921 B L1
ENSG00000088035 ALG6 -355346 sc-eQTL 7.01e-01 0.0556 0.145 0.921 B L1
ENSG00000116641 DOCK7 323843 sc-eQTL 9.45e-01 0.00999 0.145 0.921 B L1
ENSG00000125703 ATG4C 228097 sc-eQTL 5.82e-01 0.0555 0.101 0.921 B L1
ENSG00000142856 ITGB3BP -581492 sc-eQTL 9.27e-01 0.0147 0.16 0.921 B L1
ENSG00000162607 USP1 575932 sc-eQTL 1.69e-01 -0.191 0.138 0.921 B L1
ENSG00000203965 EFCAB7 -511143 sc-eQTL 9.88e-01 0.00249 0.164 0.921 B L1
ENSG00000079739 PGM1 -581182 sc-eQTL 2.16e-01 0.15 0.121 0.921 CD4T L1
ENSG00000088035 ALG6 -355346 sc-eQTL 3.20e-01 -0.133 0.133 0.921 CD4T L1
ENSG00000116641 DOCK7 323843 sc-eQTL 7.05e-01 0.0513 0.135 0.921 CD4T L1
ENSG00000125703 ATG4C 228097 sc-eQTL 9.47e-01 -0.00729 0.109 0.921 CD4T L1
ENSG00000142856 ITGB3BP -581492 sc-eQTL 5.37e-01 0.0959 0.155 0.921 CD4T L1
ENSG00000162607 USP1 575932 sc-eQTL 9.98e-01 -0.000222 0.106 0.921 CD4T L1
ENSG00000203965 EFCAB7 -511143 sc-eQTL 7.34e-01 0.0474 0.139 0.921 CD4T L1
ENSG00000079739 PGM1 -581182 sc-eQTL 2.40e-01 0.158 0.134 0.921 CD8T L1
ENSG00000088035 ALG6 -355346 sc-eQTL 3.23e-01 0.147 0.148 0.921 CD8T L1
ENSG00000116641 DOCK7 323843 sc-eQTL 8.36e-01 -0.0312 0.15 0.921 CD8T L1
ENSG00000125703 ATG4C 228097 sc-eQTL 4.82e-01 -0.101 0.143 0.921 CD8T L1
ENSG00000142856 ITGB3BP -581492 sc-eQTL 9.00e-01 0.0201 0.16 0.921 CD8T L1
ENSG00000162607 USP1 575932 sc-eQTL 9.97e-01 -0.000516 0.125 0.921 CD8T L1
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.79e-01 0.14 0.159 0.921 CD8T L1
ENSG00000079739 PGM1 -581182 sc-eQTL 9.12e-01 -0.0164 0.148 0.919 DC L1
ENSG00000088035 ALG6 -355346 sc-eQTL 8.19e-01 -0.0349 0.153 0.919 DC L1
ENSG00000116641 DOCK7 323843 sc-eQTL 7.79e-01 -0.0439 0.156 0.919 DC L1
ENSG00000125703 ATG4C 228097 sc-eQTL 8.22e-02 0.212 0.121 0.919 DC L1
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.49e-01 -0.078 0.171 0.919 DC L1
ENSG00000162607 USP1 575932 sc-eQTL 4.70e-01 0.108 0.149 0.919 DC L1
ENSG00000203965 EFCAB7 -511143 sc-eQTL 1.06e-01 0.24 0.148 0.919 DC L1
ENSG00000079739 PGM1 -581182 sc-eQTL 4.56e-01 0.107 0.143 0.921 Mono L1
ENSG00000088035 ALG6 -355346 sc-eQTL 5.25e-01 -0.0953 0.15 0.921 Mono L1
ENSG00000116641 DOCK7 323843 sc-eQTL 5.87e-01 0.0787 0.145 0.921 Mono L1
ENSG00000125703 ATG4C 228097 sc-eQTL 8.18e-01 -0.0226 0.0978 0.921 Mono L1
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.63e-01 0.0267 0.155 0.921 Mono L1
ENSG00000162607 USP1 575932 sc-eQTL 5.93e-01 -0.0679 0.127 0.921 Mono L1
ENSG00000240563 L1TD1 817380 sc-eQTL 8.56e-01 0.0216 0.118 0.921 Mono L1
ENSG00000079739 PGM1 -581182 sc-eQTL 3.13e-01 -0.125 0.123 0.921 NK L1
ENSG00000088035 ALG6 -355346 sc-eQTL 7.67e-01 -0.0431 0.145 0.921 NK L1
ENSG00000116641 DOCK7 323843 sc-eQTL 3.90e-01 0.103 0.119 0.921 NK L1
ENSG00000125703 ATG4C 228097 sc-eQTL 9.73e-01 0.0043 0.128 0.921 NK L1
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.18e-01 -0.0797 0.159 0.921 NK L1
ENSG00000162607 USP1 575932 sc-eQTL 1.78e-02 0.336 0.141 0.921 NK L1
ENSG00000203965 EFCAB7 -511143 sc-eQTL 4.21e-01 0.14 0.173 0.921 NK L1
ENSG00000079739 PGM1 -581182 sc-eQTL 6.81e-01 0.0583 0.142 0.921 Other_T L1
ENSG00000088035 ALG6 -355346 sc-eQTL 6.56e-01 0.0634 0.142 0.921 Other_T L1
ENSG00000116641 DOCK7 323843 sc-eQTL 5.86e-01 -0.0793 0.145 0.921 Other_T L1
ENSG00000125703 ATG4C 228097 sc-eQTL 4.22e-01 0.101 0.126 0.921 Other_T L1
ENSG00000142856 ITGB3BP -581492 sc-eQTL 5.11e-01 -0.0734 0.112 0.921 Other_T L1
ENSG00000162607 USP1 575932 sc-eQTL 9.56e-01 -0.00532 0.0968 0.921 Other_T L1
ENSG00000203965 EFCAB7 -511143 sc-eQTL 9.98e-01 -0.000449 0.172 0.921 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -581182 sc-eQTL 9.67e-01 -0.0083 0.201 0.926 B_Activated L2
ENSG00000088035 ALG6 -355346 sc-eQTL 7.96e-01 0.05 0.193 0.926 B_Activated L2
ENSG00000116641 DOCK7 323843 sc-eQTL 2.50e-01 0.206 0.179 0.926 B_Activated L2
ENSG00000125703 ATG4C 228097 sc-eQTL 5.22e-01 0.121 0.188 0.926 B_Activated L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 2.37e-01 0.218 0.183 0.926 B_Activated L2
ENSG00000162607 USP1 575932 sc-eQTL 6.75e-01 -0.0839 0.2 0.926 B_Activated L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 9.92e-01 -0.00179 0.174 0.926 B_Activated L2
ENSG00000079739 PGM1 -581182 sc-eQTL 1.07e-01 -0.275 0.17 0.921 B_Intermediate L2
ENSG00000088035 ALG6 -355346 sc-eQTL 6.41e-01 0.0811 0.173 0.921 B_Intermediate L2
ENSG00000116641 DOCK7 323843 sc-eQTL 4.42e-01 -0.127 0.165 0.921 B_Intermediate L2
ENSG00000125703 ATG4C 228097 sc-eQTL 8.06e-01 -0.0344 0.14 0.921 B_Intermediate L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.66e-01 0.0721 0.167 0.921 B_Intermediate L2
ENSG00000162607 USP1 575932 sc-eQTL 5.53e-01 0.0991 0.167 0.921 B_Intermediate L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 5.86e-01 -0.0902 0.165 0.921 B_Intermediate L2
ENSG00000079739 PGM1 -581182 sc-eQTL 6.48e-01 0.0766 0.168 0.92 B_Memory L2
ENSG00000088035 ALG6 -355346 sc-eQTL 1.97e-01 -0.22 0.17 0.92 B_Memory L2
ENSG00000116641 DOCK7 323843 sc-eQTL 6.53e-01 0.072 0.16 0.92 B_Memory L2
ENSG00000125703 ATG4C 228097 sc-eQTL 7.06e-01 0.0574 0.152 0.92 B_Memory L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 2.26e-01 0.211 0.173 0.92 B_Memory L2
ENSG00000162607 USP1 575932 sc-eQTL 5.03e-01 -0.118 0.175 0.92 B_Memory L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 6.07e-01 0.089 0.173 0.92 B_Memory L2
ENSG00000079739 PGM1 -581182 sc-eQTL 6.64e-01 -0.0726 0.167 0.921 B_Naive1 L2
ENSG00000088035 ALG6 -355346 sc-eQTL 6.96e-01 0.0655 0.167 0.921 B_Naive1 L2
ENSG00000116641 DOCK7 323843 sc-eQTL 2.89e-01 -0.17 0.16 0.921 B_Naive1 L2
ENSG00000125703 ATG4C 228097 sc-eQTL 3.59e-01 0.113 0.123 0.921 B_Naive1 L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.71e-01 0.0267 0.164 0.921 B_Naive1 L2
ENSG00000162607 USP1 575932 sc-eQTL 3.80e-01 -0.127 0.144 0.921 B_Naive1 L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 4.15e-01 0.143 0.175 0.921 B_Naive1 L2
ENSG00000079739 PGM1 -581182 sc-eQTL 9.08e-01 -0.0189 0.163 0.921 B_Naive2 L2
ENSG00000088035 ALG6 -355346 sc-eQTL 4.55e-01 0.127 0.17 0.921 B_Naive2 L2
ENSG00000116641 DOCK7 323843 sc-eQTL 1.12e-01 0.26 0.163 0.921 B_Naive2 L2
ENSG00000125703 ATG4C 228097 sc-eQTL 4.93e-01 0.108 0.157 0.921 B_Naive2 L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 9.95e-01 -0.00114 0.171 0.921 B_Naive2 L2
ENSG00000162607 USP1 575932 sc-eQTL 9.98e-01 0.000325 0.163 0.921 B_Naive2 L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 9.32e-01 0.0145 0.17 0.921 B_Naive2 L2
ENSG00000079739 PGM1 -581182 sc-eQTL 3.81e-01 0.15 0.171 0.923 CD4_CTL L2
ENSG00000088035 ALG6 -355346 sc-eQTL 4.61e-01 0.134 0.181 0.923 CD4_CTL L2
ENSG00000116641 DOCK7 323843 sc-eQTL 3.03e-01 0.163 0.158 0.923 CD4_CTL L2
ENSG00000125703 ATG4C 228097 sc-eQTL 5.13e-01 -0.107 0.164 0.923 CD4_CTL L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.29e-01 -0.0378 0.175 0.923 CD4_CTL L2
ENSG00000162607 USP1 575932 sc-eQTL 9.34e-01 0.0138 0.167 0.923 CD4_CTL L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 2.53e-01 -0.19 0.166 0.923 CD4_CTL L2
ENSG00000079739 PGM1 -581182 sc-eQTL 2.56e-01 0.154 0.136 0.921 CD4_Naive L2
ENSG00000088035 ALG6 -355346 sc-eQTL 8.10e-02 -0.257 0.147 0.921 CD4_Naive L2
ENSG00000116641 DOCK7 323843 sc-eQTL 8.45e-01 0.0285 0.145 0.921 CD4_Naive L2
ENSG00000125703 ATG4C 228097 sc-eQTL 4.94e-01 -0.0877 0.128 0.921 CD4_Naive L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 5.38e-01 0.0966 0.157 0.921 CD4_Naive L2
ENSG00000162607 USP1 575932 sc-eQTL 9.35e-01 -0.00974 0.12 0.921 CD4_Naive L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 7.17e-01 0.0565 0.156 0.921 CD4_Naive L2
ENSG00000079739 PGM1 -581182 sc-eQTL 4.91e-01 0.0961 0.139 0.921 CD4_TCM L2
ENSG00000088035 ALG6 -355346 sc-eQTL 8.99e-01 -0.0206 0.162 0.921 CD4_TCM L2
ENSG00000116641 DOCK7 323843 sc-eQTL 3.16e-01 0.144 0.143 0.921 CD4_TCM L2
ENSG00000125703 ATG4C 228097 sc-eQTL 9.20e-01 -0.014 0.14 0.921 CD4_TCM L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 4.45e-01 -0.126 0.164 0.921 CD4_TCM L2
ENSG00000162607 USP1 575932 sc-eQTL 5.48e-01 0.0812 0.135 0.921 CD4_TCM L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 6.29e-01 -0.0771 0.159 0.921 CD4_TCM L2
ENSG00000079739 PGM1 -581182 sc-eQTL 1.24e-01 0.254 0.165 0.921 CD4_TEM L2
ENSG00000088035 ALG6 -355346 sc-eQTL 2.51e-01 0.191 0.166 0.921 CD4_TEM L2
ENSG00000116641 DOCK7 323843 sc-eQTL 3.92e-01 -0.139 0.162 0.921 CD4_TEM L2
ENSG00000125703 ATG4C 228097 sc-eQTL 5.72e-01 0.0891 0.157 0.921 CD4_TEM L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 4.59e-01 -0.12 0.162 0.921 CD4_TEM L2
ENSG00000162607 USP1 575932 sc-eQTL 2.56e-01 -0.175 0.154 0.921 CD4_TEM L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 2.05e-01 0.213 0.168 0.921 CD4_TEM L2
ENSG00000079739 PGM1 -581182 sc-eQTL 1.17e-01 0.237 0.151 0.921 CD8_CTL L2
ENSG00000088035 ALG6 -355346 sc-eQTL 3.22e-01 0.159 0.161 0.921 CD8_CTL L2
ENSG00000116641 DOCK7 323843 sc-eQTL 6.93e-01 -0.0604 0.153 0.921 CD8_CTL L2
ENSG00000125703 ATG4C 228097 sc-eQTL 4.47e-01 -0.124 0.162 0.921 CD8_CTL L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.82e-01 0.0251 0.169 0.921 CD8_CTL L2
ENSG00000162607 USP1 575932 sc-eQTL 5.30e-01 -0.0953 0.151 0.921 CD8_CTL L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.06e-01 0.177 0.173 0.921 CD8_CTL L2
ENSG00000079739 PGM1 -581182 sc-eQTL 6.94e-01 0.061 0.155 0.921 CD8_Naive L2
ENSG00000088035 ALG6 -355346 sc-eQTL 6.75e-01 -0.0675 0.161 0.921 CD8_Naive L2
ENSG00000116641 DOCK7 323843 sc-eQTL 7.81e-01 -0.0462 0.166 0.921 CD8_Naive L2
ENSG00000125703 ATG4C 228097 sc-eQTL 2.93e-01 -0.168 0.159 0.921 CD8_Naive L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.67e-01 0.027 0.161 0.921 CD8_Naive L2
ENSG00000162607 USP1 575932 sc-eQTL 7.49e-01 -0.0437 0.136 0.921 CD8_Naive L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 5.03e-01 0.102 0.152 0.921 CD8_Naive L2
ENSG00000079739 PGM1 -581182 sc-eQTL 8.95e-01 0.0226 0.171 0.919 CD8_TCM L2
ENSG00000088035 ALG6 -355346 sc-eQTL 1.08e-01 0.278 0.172 0.919 CD8_TCM L2
ENSG00000116641 DOCK7 323843 sc-eQTL 6.31e-01 0.0814 0.169 0.919 CD8_TCM L2
ENSG00000125703 ATG4C 228097 sc-eQTL 1.34e-01 -0.259 0.172 0.919 CD8_TCM L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 9.80e-02 -0.278 0.167 0.919 CD8_TCM L2
ENSG00000162607 USP1 575932 sc-eQTL 1.04e-01 -0.263 0.161 0.919 CD8_TCM L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 5.17e-01 -0.111 0.171 0.919 CD8_TCM L2
ENSG00000079739 PGM1 -581182 sc-eQTL 4.08e-01 -0.142 0.171 0.918 CD8_TEM L2
ENSG00000088035 ALG6 -355346 sc-eQTL 5.53e-02 0.329 0.171 0.918 CD8_TEM L2
ENSG00000116641 DOCK7 323843 sc-eQTL 6.99e-01 -0.0645 0.167 0.918 CD8_TEM L2
ENSG00000125703 ATG4C 228097 sc-eQTL 1.04e-02 0.408 0.158 0.918 CD8_TEM L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 3.40e-01 0.166 0.173 0.918 CD8_TEM L2
ENSG00000162607 USP1 575932 sc-eQTL 5.36e-01 -0.103 0.166 0.918 CD8_TEM L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.25e-01 -0.166 0.168 0.918 CD8_TEM L2
ENSG00000079739 PGM1 -581182 sc-eQTL 6.54e-01 -0.0712 0.159 0.92 MAIT L2
ENSG00000088035 ALG6 -355346 sc-eQTL 7.16e-01 0.0573 0.157 0.92 MAIT L2
ENSG00000116641 DOCK7 323843 sc-eQTL 7.93e-01 0.0396 0.151 0.92 MAIT L2
ENSG00000125703 ATG4C 228097 sc-eQTL 3.84e-01 -0.138 0.159 0.92 MAIT L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 5.33e-01 0.0993 0.159 0.92 MAIT L2
ENSG00000162607 USP1 575932 sc-eQTL 1.44e-01 0.231 0.157 0.92 MAIT L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 7.93e-01 0.043 0.164 0.92 MAIT L2
ENSG00000079739 PGM1 -581182 sc-eQTL 4.44e-01 -0.122 0.16 0.92 NK_CD56bright L2
ENSG00000088035 ALG6 -355346 sc-eQTL 7.26e-01 0.0575 0.164 0.92 NK_CD56bright L2
ENSG00000116641 DOCK7 323843 sc-eQTL 7.25e-01 0.05 0.142 0.92 NK_CD56bright L2
ENSG00000125703 ATG4C 228097 sc-eQTL 5.91e-01 0.0853 0.158 0.92 NK_CD56bright L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.79e-01 -0.0683 0.165 0.92 NK_CD56bright L2
ENSG00000162607 USP1 575932 sc-eQTL 8.48e-01 -0.0327 0.17 0.92 NK_CD56bright L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.36e-01 -0.157 0.163 0.92 NK_CD56bright L2
ENSG00000079739 PGM1 -581182 sc-eQTL 4.92e-01 -0.0883 0.128 0.922 NK_CD56dim L2
ENSG00000088035 ALG6 -355346 sc-eQTL 3.09e-01 -0.166 0.162 0.922 NK_CD56dim L2
ENSG00000116641 DOCK7 323843 sc-eQTL 7.04e-01 0.0539 0.142 0.922 NK_CD56dim L2
ENSG00000125703 ATG4C 228097 sc-eQTL 6.09e-01 -0.0737 0.144 0.922 NK_CD56dim L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.76e-01 0.0257 0.164 0.922 NK_CD56dim L2
ENSG00000162607 USP1 575932 sc-eQTL 5.06e-03 0.441 0.156 0.922 NK_CD56dim L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 7.55e-01 0.0552 0.177 0.922 NK_CD56dim L2
ENSG00000079739 PGM1 -581182 sc-eQTL 3.90e-01 -0.151 0.176 0.925 NK_HLA L2
ENSG00000088035 ALG6 -355346 sc-eQTL 1.22e-02 0.454 0.18 0.925 NK_HLA L2
ENSG00000116641 DOCK7 323843 sc-eQTL 3.62e-01 0.127 0.139 0.925 NK_HLA L2
ENSG00000125703 ATG4C 228097 sc-eQTL 1.72e-01 -0.222 0.162 0.925 NK_HLA L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 3.25e-01 -0.168 0.17 0.925 NK_HLA L2
ENSG00000162607 USP1 575932 sc-eQTL 5.02e-01 -0.12 0.178 0.925 NK_HLA L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.65e-01 -0.147 0.162 0.925 NK_HLA L2
ENSG00000079739 PGM1 -581182 sc-eQTL 6.85e-01 -0.0576 0.142 0.922 NK_cytokine L2
ENSG00000088035 ALG6 -355346 sc-eQTL 3.78e-01 -0.141 0.16 0.922 NK_cytokine L2
ENSG00000116641 DOCK7 323843 sc-eQTL 4.91e-01 -0.102 0.148 0.922 NK_cytokine L2
ENSG00000125703 ATG4C 228097 sc-eQTL 6.47e-01 0.0695 0.152 0.922 NK_cytokine L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.81e-01 -0.0236 0.157 0.922 NK_cytokine L2
ENSG00000162607 USP1 575932 sc-eQTL 1.31e-01 0.249 0.164 0.922 NK_cytokine L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.25e-01 0.165 0.167 0.922 NK_cytokine L2
ENSG00000079739 PGM1 -581182 sc-eQTL 9.04e-01 0.0258 0.214 0.915 PB L2
ENSG00000088035 ALG6 -355346 sc-eQTL 9.38e-02 0.375 0.222 0.915 PB L2
ENSG00000116641 DOCK7 323843 sc-eQTL 3.06e-01 -0.246 0.239 0.915 PB L2
ENSG00000125703 ATG4C 228097 sc-eQTL 7.04e-01 0.0799 0.21 0.915 PB L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 7.43e-01 0.0687 0.209 0.915 PB L2
ENSG00000162607 USP1 575932 sc-eQTL 6.60e-01 0.092 0.208 0.915 PB L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 9.84e-01 0.00466 0.23 0.915 PB L2
ENSG00000079739 PGM1 -581182 sc-eQTL 3.96e-01 -0.128 0.15 0.92 Pro_T L2
ENSG00000088035 ALG6 -355346 sc-eQTL 5.39e-01 0.094 0.153 0.92 Pro_T L2
ENSG00000116641 DOCK7 323843 sc-eQTL 1.92e-01 -0.2 0.153 0.92 Pro_T L2
ENSG00000125703 ATG4C 228097 sc-eQTL 1.35e-01 0.201 0.134 0.92 Pro_T L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.01e-02 -0.252 0.134 0.92 Pro_T L2
ENSG00000162607 USP1 575932 sc-eQTL 3.29e-01 -0.0905 0.0924 0.92 Pro_T L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 5.95e-01 -0.0832 0.156 0.92 Pro_T L2
ENSG00000079739 PGM1 -581182 sc-eQTL 2.30e-01 0.192 0.159 0.921 Treg L2
ENSG00000088035 ALG6 -355346 sc-eQTL 9.09e-01 0.0195 0.171 0.921 Treg L2
ENSG00000116641 DOCK7 323843 sc-eQTL 5.49e-01 -0.0942 0.157 0.921 Treg L2
ENSG00000125703 ATG4C 228097 sc-eQTL 9.79e-01 -0.00429 0.16 0.921 Treg L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 3.59e-02 0.351 0.166 0.921 Treg L2
ENSG00000162607 USP1 575932 sc-eQTL 9.56e-01 -0.00891 0.162 0.921 Treg L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.93e-01 0.137 0.16 0.921 Treg L2
ENSG00000079739 PGM1 -581182 sc-eQTL 8.56e-01 -0.0291 0.16 0.917 cDC L2
ENSG00000088035 ALG6 -355346 sc-eQTL 6.89e-01 0.065 0.162 0.917 cDC L2
ENSG00000116641 DOCK7 323843 sc-eQTL 5.68e-01 -0.091 0.159 0.917 cDC L2
ENSG00000125703 ATG4C 228097 sc-eQTL 6.42e-02 0.255 0.137 0.917 cDC L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 5.94e-01 -0.0934 0.175 0.917 cDC L2
ENSG00000162607 USP1 575932 sc-eQTL 9.87e-01 0.00245 0.156 0.917 cDC L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 8.71e-02 0.24 0.14 0.917 cDC L2
ENSG00000079739 PGM1 -581182 sc-eQTL 8.75e-01 0.0235 0.149 0.921 cMono_IL1B L2
ENSG00000088035 ALG6 -355346 sc-eQTL 1.91e-01 -0.195 0.149 0.921 cMono_IL1B L2
ENSG00000116641 DOCK7 323843 sc-eQTL 7.77e-01 0.0447 0.157 0.921 cMono_IL1B L2
ENSG00000125703 ATG4C 228097 sc-eQTL 8.54e-01 0.0204 0.111 0.921 cMono_IL1B L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.86e-01 0.0635 0.157 0.921 cMono_IL1B L2
ENSG00000162607 USP1 575932 sc-eQTL 9.82e-02 -0.228 0.137 0.921 cMono_IL1B L2
ENSG00000240563 L1TD1 817380 sc-eQTL 6.80e-01 0.0574 0.139 0.921 cMono_IL1B L2
ENSG00000079739 PGM1 -581182 sc-eQTL 5.73e-01 0.0936 0.166 0.921 cMono_S100A L2
ENSG00000088035 ALG6 -355346 sc-eQTL 5.00e-01 0.114 0.168 0.921 cMono_S100A L2
ENSG00000116641 DOCK7 323843 sc-eQTL 7.29e-01 -0.054 0.156 0.921 cMono_S100A L2
ENSG00000125703 ATG4C 228097 sc-eQTL 4.90e-01 -0.0933 0.135 0.921 cMono_S100A L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.02e-01 -0.0383 0.152 0.921 cMono_S100A L2
ENSG00000162607 USP1 575932 sc-eQTL 5.95e-01 -0.0834 0.157 0.921 cMono_S100A L2
ENSG00000240563 L1TD1 817380 sc-eQTL 7.62e-01 0.0396 0.13 0.921 cMono_S100A L2
ENSG00000079739 PGM1 -581182 sc-eQTL 9.84e-01 -0.00355 0.175 0.915 gdT L2
ENSG00000088035 ALG6 -355346 sc-eQTL 2.19e-01 0.229 0.185 0.915 gdT L2
ENSG00000116641 DOCK7 323843 sc-eQTL 1.55e-01 -0.259 0.181 0.915 gdT L2
ENSG00000125703 ATG4C 228097 sc-eQTL 9.26e-01 0.0163 0.175 0.915 gdT L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 5.80e-01 -0.103 0.185 0.915 gdT L2
ENSG00000162607 USP1 575932 sc-eQTL 7.63e-02 -0.31 0.173 0.915 gdT L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 8.02e-01 -0.0458 0.182 0.915 gdT L2
ENSG00000079739 PGM1 -581182 sc-eQTL 8.26e-01 -0.0371 0.169 0.92 intMono L2
ENSG00000088035 ALG6 -355346 sc-eQTL 6.21e-01 -0.0777 0.157 0.92 intMono L2
ENSG00000116641 DOCK7 323843 sc-eQTL 6.71e-03 0.432 0.158 0.92 intMono L2
ENSG00000125703 ATG4C 228097 sc-eQTL 9.71e-01 0.0055 0.153 0.92 intMono L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.65e-01 -0.0732 0.169 0.92 intMono L2
ENSG00000162607 USP1 575932 sc-eQTL 1.34e-01 0.257 0.171 0.92 intMono L2
ENSG00000240563 L1TD1 817380 sc-eQTL 7.71e-01 0.0368 0.126 0.92 intMono L2
ENSG00000079739 PGM1 -581182 sc-eQTL 8.27e-01 0.0325 0.148 0.916 ncMono L2
ENSG00000088035 ALG6 -355346 sc-eQTL 3.94e-01 -0.139 0.162 0.916 ncMono L2
ENSG00000116641 DOCK7 323843 sc-eQTL 2.05e-01 0.203 0.159 0.916 ncMono L2
ENSG00000125703 ATG4C 228097 sc-eQTL 7.86e-01 -0.0407 0.149 0.916 ncMono L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 9.57e-01 0.00835 0.156 0.916 ncMono L2
ENSG00000162607 USP1 575932 sc-eQTL 9.78e-01 -0.00434 0.16 0.916 ncMono L2
ENSG00000240563 L1TD1 817380 sc-eQTL 5.33e-01 0.0708 0.113 0.916 ncMono L2
ENSG00000079739 PGM1 -581182 sc-eQTL 8.24e-01 0.0394 0.177 0.921 pDC L2
ENSG00000088035 ALG6 -355346 sc-eQTL 6.65e-01 -0.0749 0.172 0.921 pDC L2
ENSG00000116641 DOCK7 323843 sc-eQTL 8.94e-01 -0.0235 0.176 0.921 pDC L2
ENSG00000125703 ATG4C 228097 sc-eQTL 1.60e-01 0.222 0.157 0.921 pDC L2
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.09e-01 0.0909 0.177 0.921 pDC L2
ENSG00000162607 USP1 575932 sc-eQTL 1.71e-01 0.247 0.18 0.921 pDC L2
ENSG00000203965 EFCAB7 -511143 sc-eQTL 2.80e-01 0.169 0.156 0.921 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -581182 sc-eQTL 3.20e-01 -0.156 0.157 0.921 B_Memory LOneK1K
ENSG00000088035 ALG6 -355346 sc-eQTL 5.05e-01 -0.116 0.173 0.921 B_Memory LOneK1K
ENSG00000116641 DOCK7 323843 sc-eQTL 8.12e-01 0.0359 0.151 0.921 B_Memory LOneK1K
ENSG00000125703 ATG4C 228097 sc-eQTL 5.77e-01 0.0679 0.122 0.921 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -581492 sc-eQTL 9.42e-02 0.267 0.159 0.921 B_Memory LOneK1K
ENSG00000162607 USP1 575932 sc-eQTL 9.61e-01 0.00764 0.155 0.921 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -511143 sc-eQTL 6.58e-01 -0.0739 0.167 0.921 B_Memory LOneK1K
ENSG00000079739 PGM1 -581182 sc-eQTL 7.21e-01 -0.0582 0.162 0.921 B_Naive LOneK1K
ENSG00000088035 ALG6 -355346 sc-eQTL 4.31e-01 0.132 0.167 0.921 B_Naive LOneK1K
ENSG00000116641 DOCK7 323843 sc-eQTL 7.99e-01 -0.0398 0.156 0.921 B_Naive LOneK1K
ENSG00000125703 ATG4C 228097 sc-eQTL 7.07e-01 0.0449 0.119 0.921 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.61e-01 -0.0296 0.169 0.921 B_Naive LOneK1K
ENSG00000162607 USP1 575932 sc-eQTL 3.60e-01 -0.133 0.145 0.921 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -511143 sc-eQTL 4.20e-01 0.137 0.169 0.921 B_Naive LOneK1K
ENSG00000079739 PGM1 -581182 sc-eQTL 5.01e-01 0.103 0.153 0.921 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -355346 sc-eQTL 6.07e-01 -0.0762 0.148 0.921 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 323843 sc-eQTL 8.76e-01 0.0233 0.149 0.921 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 228097 sc-eQTL 7.32e-01 -0.0353 0.103 0.921 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -581492 sc-eQTL 8.80e-01 0.023 0.152 0.921 CD14_Mono LOneK1K
ENSG00000162607 USP1 575932 sc-eQTL 2.28e-01 -0.157 0.13 0.921 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 817380 sc-eQTL 7.93e-01 0.0371 0.141 0.921 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -581182 sc-eQTL 9.36e-01 -0.0117 0.146 0.92 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -355346 sc-eQTL 4.90e-01 -0.114 0.166 0.92 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 323843 sc-eQTL 1.05e-02 0.417 0.162 0.92 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 228097 sc-eQTL 7.98e-01 -0.0358 0.14 0.92 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.18e-01 -0.0812 0.162 0.92 CD16_Mono LOneK1K
ENSG00000162607 USP1 575932 sc-eQTL 4.40e-01 0.118 0.152 0.92 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 817380 sc-eQTL 5.72e-01 0.0589 0.104 0.92 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -581182 sc-eQTL 6.95e-01 -0.0493 0.125 0.922 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -355346 sc-eQTL 4.66e-01 -0.11 0.151 0.922 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 323843 sc-eQTL 8.44e-01 0.0267 0.135 0.922 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 228097 sc-eQTL 8.10e-01 -0.0325 0.135 0.922 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -581492 sc-eQTL 6.46e-01 -0.0735 0.16 0.922 NK_CD56dim LOneK1K
ENSG00000162607 USP1 575932 sc-eQTL 5.17e-03 0.402 0.142 0.922 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -511143 sc-eQTL 3.25e-01 0.174 0.176 0.922 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -581182 eQTL 0.0424 -0.0652 0.0321 0.0 0.0 0.0873

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000203965 \N -511143 7.57e-07 4.78e-07 1.05e-07 3.58e-07 1.07e-07 2.16e-07 5.2e-07 1.09e-07 3.51e-07 2.16e-07 4.74e-07 3.27e-07 6.27e-07 1.1e-07 1.45e-07 1.96e-07 2.34e-07 3.3e-07 1.62e-07 1.08e-07 1.89e-07 3.13e-07 3.04e-07 1.25e-07 6.87e-07 2.4e-07 2.24e-07 2.13e-07 3.27e-07 4.61e-07 2.55e-07 7.59e-08 5.68e-08 1.21e-07 3.03e-07 6.33e-08 1.06e-07 9.58e-08 4.11e-08 5.88e-08 4.45e-08 4.02e-07 2.88e-08 5.58e-09 9.15e-08 1.25e-08 1.04e-07 1.15e-08 5.61e-08