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Genes within 1Mb (chr1:63012043:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -581368 sc-eQTL 8.01e-01 -0.0355 0.141 0.923 B L1
ENSG00000088035 ALG6 -355532 sc-eQTL 6.15e-01 0.0734 0.146 0.923 B L1
ENSG00000116641 DOCK7 323657 sc-eQTL 8.51e-01 0.0275 0.146 0.923 B L1
ENSG00000125703 ATG4C 227911 sc-eQTL 5.09e-01 0.067 0.101 0.923 B L1
ENSG00000142856 ITGB3BP -581678 sc-eQTL 7.87e-01 -0.0436 0.161 0.923 B L1
ENSG00000162607 USP1 575746 sc-eQTL 1.75e-01 -0.19 0.139 0.923 B L1
ENSG00000203965 EFCAB7 -511329 sc-eQTL 9.37e-01 -0.0131 0.165 0.923 B L1
ENSG00000079739 PGM1 -581368 sc-eQTL 2.88e-01 0.13 0.122 0.923 CD4T L1
ENSG00000088035 ALG6 -355532 sc-eQTL 4.13e-01 -0.111 0.135 0.923 CD4T L1
ENSG00000116641 DOCK7 323657 sc-eQTL 7.10e-01 0.0509 0.137 0.923 CD4T L1
ENSG00000125703 ATG4C 227911 sc-eQTL 9.75e-01 0.00349 0.11 0.923 CD4T L1
ENSG00000142856 ITGB3BP -581678 sc-eQTL 6.65e-01 0.068 0.157 0.923 CD4T L1
ENSG00000162607 USP1 575746 sc-eQTL 8.46e-01 0.0209 0.107 0.923 CD4T L1
ENSG00000203965 EFCAB7 -511329 sc-eQTL 6.60e-01 0.0619 0.141 0.923 CD4T L1
ENSG00000079739 PGM1 -581368 sc-eQTL 4.06e-01 0.113 0.135 0.923 CD8T L1
ENSG00000088035 ALG6 -355532 sc-eQTL 2.11e-01 0.187 0.149 0.923 CD8T L1
ENSG00000116641 DOCK7 323657 sc-eQTL 7.88e-01 -0.0408 0.151 0.923 CD8T L1
ENSG00000125703 ATG4C 227911 sc-eQTL 7.46e-01 -0.0466 0.144 0.923 CD8T L1
ENSG00000142856 ITGB3BP -581678 sc-eQTL 9.25e-01 -0.0151 0.161 0.923 CD8T L1
ENSG00000162607 USP1 575746 sc-eQTL 9.65e-01 0.00556 0.125 0.923 CD8T L1
ENSG00000203965 EFCAB7 -511329 sc-eQTL 4.51e-01 0.121 0.16 0.923 CD8T L1
ENSG00000079739 PGM1 -581368 sc-eQTL 9.94e-01 0.00117 0.15 0.921 DC L1
ENSG00000088035 ALG6 -355532 sc-eQTL 8.86e-01 -0.0221 0.154 0.921 DC L1
ENSG00000116641 DOCK7 323657 sc-eQTL 6.97e-01 -0.0617 0.158 0.921 DC L1
ENSG00000125703 ATG4C 227911 sc-eQTL 1.35e-01 0.185 0.123 0.921 DC L1
ENSG00000142856 ITGB3BP -581678 sc-eQTL 7.06e-01 -0.0654 0.173 0.921 DC L1
ENSG00000162607 USP1 575746 sc-eQTL 5.63e-01 0.0876 0.151 0.921 DC L1
ENSG00000203965 EFCAB7 -511329 sc-eQTL 1.29e-01 0.229 0.15 0.921 DC L1
ENSG00000079739 PGM1 -581368 sc-eQTL 3.90e-01 0.124 0.144 0.923 Mono L1
ENSG00000088035 ALG6 -355532 sc-eQTL 5.96e-01 -0.0798 0.151 0.923 Mono L1
ENSG00000116641 DOCK7 323657 sc-eQTL 7.21e-01 0.052 0.146 0.923 Mono L1
ENSG00000125703 ATG4C 227911 sc-eQTL 7.04e-01 -0.0375 0.0984 0.923 Mono L1
ENSG00000142856 ITGB3BP -581678 sc-eQTL 9.84e-01 -0.00313 0.156 0.923 Mono L1
ENSG00000162607 USP1 575746 sc-eQTL 5.56e-01 -0.0752 0.128 0.923 Mono L1
ENSG00000240563 L1TD1 817194 sc-eQTL 9.98e-01 -0.000342 0.119 0.923 Mono L1
ENSG00000079739 PGM1 -581368 sc-eQTL 2.63e-01 -0.141 0.125 0.923 NK L1
ENSG00000088035 ALG6 -355532 sc-eQTL 8.27e-01 -0.0323 0.147 0.923 NK L1
ENSG00000116641 DOCK7 323657 sc-eQTL 5.99e-01 0.0637 0.121 0.923 NK L1
ENSG00000125703 ATG4C 227911 sc-eQTL 7.91e-01 0.0346 0.13 0.923 NK L1
ENSG00000142856 ITGB3BP -581678 sc-eQTL 5.19e-01 -0.104 0.162 0.923 NK L1
ENSG00000162607 USP1 575746 sc-eQTL 1.80e-02 0.34 0.143 0.923 NK L1
ENSG00000203965 EFCAB7 -511329 sc-eQTL 5.69e-01 0.1 0.176 0.923 NK L1
ENSG00000079739 PGM1 -581368 sc-eQTL 6.69e-01 0.0613 0.143 0.923 Other_T L1
ENSG00000088035 ALG6 -355532 sc-eQTL 9.88e-01 -0.00218 0.144 0.923 Other_T L1
ENSG00000116641 DOCK7 323657 sc-eQTL 7.04e-01 -0.0558 0.147 0.923 Other_T L1
ENSG00000125703 ATG4C 227911 sc-eQTL 3.60e-01 0.116 0.127 0.923 Other_T L1
ENSG00000142856 ITGB3BP -581678 sc-eQTL 8.15e-01 -0.0265 0.113 0.923 Other_T L1
ENSG00000162607 USP1 575746 sc-eQTL 9.92e-01 -0.00101 0.0977 0.923 Other_T L1
ENSG00000203965 EFCAB7 -511329 sc-eQTL 8.78e-01 -0.0266 0.174 0.923 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -581368 sc-eQTL 9.67e-01 -0.0083 0.201 0.926 B_Activated L2
ENSG00000088035 ALG6 -355532 sc-eQTL 7.96e-01 0.05 0.193 0.926 B_Activated L2
ENSG00000116641 DOCK7 323657 sc-eQTL 2.50e-01 0.206 0.179 0.926 B_Activated L2
ENSG00000125703 ATG4C 227911 sc-eQTL 5.22e-01 0.121 0.188 0.926 B_Activated L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 2.37e-01 0.218 0.183 0.926 B_Activated L2
ENSG00000162607 USP1 575746 sc-eQTL 6.75e-01 -0.0839 0.2 0.926 B_Activated L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 9.92e-01 -0.00179 0.174 0.926 B_Activated L2
ENSG00000079739 PGM1 -581368 sc-eQTL 2.19e-01 -0.213 0.172 0.923 B_Intermediate L2
ENSG00000088035 ALG6 -355532 sc-eQTL 5.05e-01 0.117 0.175 0.923 B_Intermediate L2
ENSG00000116641 DOCK7 323657 sc-eQTL 5.26e-01 -0.107 0.168 0.923 B_Intermediate L2
ENSG00000125703 ATG4C 227911 sc-eQTL 8.47e-01 -0.0275 0.142 0.923 B_Intermediate L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 8.00e-01 0.0429 0.169 0.923 B_Intermediate L2
ENSG00000162607 USP1 575746 sc-eQTL 5.37e-01 0.104 0.169 0.923 B_Intermediate L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 5.57e-01 -0.0986 0.167 0.923 B_Intermediate L2
ENSG00000079739 PGM1 -581368 sc-eQTL 7.10e-01 0.0627 0.169 0.922 B_Memory L2
ENSG00000088035 ALG6 -355532 sc-eQTL 2.17e-01 -0.212 0.171 0.922 B_Memory L2
ENSG00000116641 DOCK7 323657 sc-eQTL 5.71e-01 0.0913 0.161 0.922 B_Memory L2
ENSG00000125703 ATG4C 227911 sc-eQTL 7.56e-01 0.0476 0.153 0.922 B_Memory L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 2.69e-01 0.193 0.174 0.922 B_Memory L2
ENSG00000162607 USP1 575746 sc-eQTL 3.19e-01 -0.176 0.176 0.922 B_Memory L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 7.94e-01 0.0454 0.174 0.922 B_Memory L2
ENSG00000079739 PGM1 -581368 sc-eQTL 8.86e-01 -0.0242 0.169 0.923 B_Naive1 L2
ENSG00000088035 ALG6 -355532 sc-eQTL 6.20e-01 0.084 0.169 0.923 B_Naive1 L2
ENSG00000116641 DOCK7 323657 sc-eQTL 3.06e-01 -0.166 0.162 0.923 B_Naive1 L2
ENSG00000125703 ATG4C 227911 sc-eQTL 3.28e-01 0.122 0.125 0.923 B_Naive1 L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 8.37e-01 -0.0342 0.166 0.923 B_Naive1 L2
ENSG00000162607 USP1 575746 sc-eQTL 4.60e-01 -0.108 0.146 0.923 B_Naive1 L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 6.21e-01 0.0876 0.177 0.923 B_Naive1 L2
ENSG00000079739 PGM1 -581368 sc-eQTL 8.33e-01 0.0348 0.165 0.923 B_Naive2 L2
ENSG00000088035 ALG6 -355532 sc-eQTL 3.89e-01 0.148 0.172 0.923 B_Naive2 L2
ENSG00000116641 DOCK7 323657 sc-eQTL 1.29e-01 0.251 0.165 0.923 B_Naive2 L2
ENSG00000125703 ATG4C 227911 sc-eQTL 4.07e-01 0.132 0.159 0.923 B_Naive2 L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 9.07e-01 -0.0202 0.173 0.923 B_Naive2 L2
ENSG00000162607 USP1 575746 sc-eQTL 9.57e-01 0.00894 0.165 0.923 B_Naive2 L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 7.57e-01 0.0532 0.172 0.923 B_Naive2 L2
ENSG00000079739 PGM1 -581368 sc-eQTL 2.89e-01 0.185 0.174 0.925 CD4_CTL L2
ENSG00000088035 ALG6 -355532 sc-eQTL 5.10e-01 0.122 0.184 0.925 CD4_CTL L2
ENSG00000116641 DOCK7 323657 sc-eQTL 2.63e-01 0.181 0.161 0.925 CD4_CTL L2
ENSG00000125703 ATG4C 227911 sc-eQTL 4.32e-01 -0.131 0.167 0.925 CD4_CTL L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 8.46e-01 -0.0347 0.179 0.925 CD4_CTL L2
ENSG00000162607 USP1 575746 sc-eQTL 9.49e-01 0.011 0.17 0.925 CD4_CTL L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 1.95e-01 -0.22 0.169 0.925 CD4_CTL L2
ENSG00000079739 PGM1 -581368 sc-eQTL 3.94e-01 0.117 0.137 0.923 CD4_Naive L2
ENSG00000088035 ALG6 -355532 sc-eQTL 1.27e-01 -0.227 0.148 0.923 CD4_Naive L2
ENSG00000116641 DOCK7 323657 sc-eQTL 7.78e-01 0.0413 0.146 0.923 CD4_Naive L2
ENSG00000125703 ATG4C 227911 sc-eQTL 5.26e-01 -0.0822 0.129 0.923 CD4_Naive L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 6.88e-01 0.0635 0.158 0.923 CD4_Naive L2
ENSG00000162607 USP1 575746 sc-eQTL 9.73e-01 0.00405 0.121 0.923 CD4_Naive L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 6.31e-01 0.0755 0.157 0.923 CD4_Naive L2
ENSG00000079739 PGM1 -581368 sc-eQTL 4.56e-01 0.105 0.141 0.923 CD4_TCM L2
ENSG00000088035 ALG6 -355532 sc-eQTL 7.75e-01 -0.0467 0.163 0.923 CD4_TCM L2
ENSG00000116641 DOCK7 323657 sc-eQTL 3.49e-01 0.136 0.145 0.923 CD4_TCM L2
ENSG00000125703 ATG4C 227911 sc-eQTL 9.91e-01 0.00167 0.141 0.923 CD4_TCM L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 4.08e-01 -0.137 0.166 0.923 CD4_TCM L2
ENSG00000162607 USP1 575746 sc-eQTL 5.29e-01 0.086 0.136 0.923 CD4_TCM L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 6.96e-01 -0.063 0.161 0.923 CD4_TCM L2
ENSG00000079739 PGM1 -581368 sc-eQTL 7.86e-02 0.294 0.166 0.923 CD4_TEM L2
ENSG00000088035 ALG6 -355532 sc-eQTL 2.00e-01 0.216 0.168 0.923 CD4_TEM L2
ENSG00000116641 DOCK7 323657 sc-eQTL 3.01e-01 -0.17 0.164 0.923 CD4_TEM L2
ENSG00000125703 ATG4C 227911 sc-eQTL 4.27e-01 0.127 0.159 0.923 CD4_TEM L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 3.72e-01 -0.147 0.164 0.923 CD4_TEM L2
ENSG00000162607 USP1 575746 sc-eQTL 3.17e-01 -0.156 0.156 0.923 CD4_TEM L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 2.39e-01 0.201 0.17 0.923 CD4_TEM L2
ENSG00000079739 PGM1 -581368 sc-eQTL 1.63e-01 0.213 0.153 0.923 CD8_CTL L2
ENSG00000088035 ALG6 -355532 sc-eQTL 2.51e-01 0.187 0.162 0.923 CD8_CTL L2
ENSG00000116641 DOCK7 323657 sc-eQTL 5.61e-01 -0.0901 0.155 0.923 CD8_CTL L2
ENSG00000125703 ATG4C 227911 sc-eQTL 6.34e-01 -0.0785 0.164 0.923 CD8_CTL L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 9.65e-01 -0.00751 0.171 0.923 CD8_CTL L2
ENSG00000162607 USP1 575746 sc-eQTL 6.40e-01 -0.0717 0.153 0.923 CD8_CTL L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 3.42e-01 0.166 0.175 0.923 CD8_CTL L2
ENSG00000079739 PGM1 -581368 sc-eQTL 9.72e-01 0.00559 0.156 0.923 CD8_Naive L2
ENSG00000088035 ALG6 -355532 sc-eQTL 5.31e-01 -0.102 0.162 0.923 CD8_Naive L2
ENSG00000116641 DOCK7 323657 sc-eQTL 9.45e-01 -0.0116 0.167 0.923 CD8_Naive L2
ENSG00000125703 ATG4C 227911 sc-eQTL 2.54e-01 -0.183 0.16 0.923 CD8_Naive L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 9.17e-01 -0.0169 0.163 0.923 CD8_Naive L2
ENSG00000162607 USP1 575746 sc-eQTL 6.95e-01 -0.054 0.137 0.923 CD8_Naive L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 6.41e-01 0.0717 0.153 0.923 CD8_Naive L2
ENSG00000079739 PGM1 -581368 sc-eQTL 7.88e-01 0.0466 0.173 0.921 CD8_TCM L2
ENSG00000088035 ALG6 -355532 sc-eQTL 7.44e-02 0.311 0.173 0.921 CD8_TCM L2
ENSG00000116641 DOCK7 323657 sc-eQTL 6.00e-01 0.0896 0.17 0.921 CD8_TCM L2
ENSG00000125703 ATG4C 227911 sc-eQTL 2.84e-01 -0.187 0.174 0.921 CD8_TCM L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 8.56e-02 -0.291 0.168 0.921 CD8_TCM L2
ENSG00000162607 USP1 575746 sc-eQTL 1.13e-01 -0.258 0.162 0.921 CD8_TCM L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 4.62e-01 -0.127 0.172 0.921 CD8_TCM L2
ENSG00000079739 PGM1 -581368 sc-eQTL 3.56e-01 -0.161 0.174 0.92 CD8_TEM L2
ENSG00000088035 ALG6 -355532 sc-eQTL 2.84e-02 0.382 0.173 0.92 CD8_TEM L2
ENSG00000116641 DOCK7 323657 sc-eQTL 7.86e-01 -0.0462 0.17 0.92 CD8_TEM L2
ENSG00000125703 ATG4C 227911 sc-eQTL 3.80e-03 0.468 0.16 0.92 CD8_TEM L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 3.96e-01 0.15 0.176 0.92 CD8_TEM L2
ENSG00000162607 USP1 575746 sc-eQTL 5.59e-01 -0.0987 0.169 0.92 CD8_TEM L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 3.62e-01 -0.156 0.171 0.92 CD8_TEM L2
ENSG00000079739 PGM1 -581368 sc-eQTL 9.79e-01 -0.0043 0.161 0.922 MAIT L2
ENSG00000088035 ALG6 -355532 sc-eQTL 9.90e-01 -0.00192 0.159 0.922 MAIT L2
ENSG00000116641 DOCK7 323657 sc-eQTL 6.42e-01 0.071 0.152 0.922 MAIT L2
ENSG00000125703 ATG4C 227911 sc-eQTL 4.48e-01 -0.122 0.16 0.922 MAIT L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 4.29e-01 0.127 0.161 0.922 MAIT L2
ENSG00000162607 USP1 575746 sc-eQTL 1.05e-01 0.259 0.159 0.922 MAIT L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 9.02e-01 0.0203 0.166 0.922 MAIT L2
ENSG00000079739 PGM1 -581368 sc-eQTL 4.13e-01 -0.133 0.162 0.922 NK_CD56bright L2
ENSG00000088035 ALG6 -355532 sc-eQTL 6.49e-01 0.0757 0.166 0.922 NK_CD56bright L2
ENSG00000116641 DOCK7 323657 sc-eQTL 5.86e-01 0.0785 0.144 0.922 NK_CD56bright L2
ENSG00000125703 ATG4C 227911 sc-eQTL 4.33e-01 0.126 0.161 0.922 NK_CD56bright L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 8.54e-01 -0.0308 0.167 0.922 NK_CD56bright L2
ENSG00000162607 USP1 575746 sc-eQTL 6.81e-01 -0.0711 0.173 0.922 NK_CD56bright L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 2.48e-01 -0.191 0.165 0.922 NK_CD56bright L2
ENSG00000079739 PGM1 -581368 sc-eQTL 4.68e-01 -0.0947 0.13 0.925 NK_CD56dim L2
ENSG00000088035 ALG6 -355532 sc-eQTL 2.91e-01 -0.174 0.165 0.925 NK_CD56dim L2
ENSG00000116641 DOCK7 323657 sc-eQTL 9.32e-01 0.0123 0.144 0.925 NK_CD56dim L2
ENSG00000125703 ATG4C 227911 sc-eQTL 7.89e-01 -0.0391 0.146 0.925 NK_CD56dim L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 9.06e-01 0.0196 0.166 0.925 NK_CD56dim L2
ENSG00000162607 USP1 575746 sc-eQTL 4.07e-03 0.459 0.158 0.925 NK_CD56dim L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 8.43e-01 0.0356 0.18 0.925 NK_CD56dim L2
ENSG00000079739 PGM1 -581368 sc-eQTL 4.02e-01 -0.15 0.179 0.927 NK_HLA L2
ENSG00000088035 ALG6 -355532 sc-eQTL 9.71e-03 0.476 0.182 0.927 NK_HLA L2
ENSG00000116641 DOCK7 323657 sc-eQTL 4.60e-01 0.105 0.142 0.927 NK_HLA L2
ENSG00000125703 ATG4C 227911 sc-eQTL 2.16e-01 -0.204 0.164 0.927 NK_HLA L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 2.50e-01 -0.199 0.173 0.927 NK_HLA L2
ENSG00000162607 USP1 575746 sc-eQTL 5.22e-01 -0.116 0.181 0.927 NK_HLA L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 2.92e-01 -0.174 0.165 0.927 NK_HLA L2
ENSG00000079739 PGM1 -581368 sc-eQTL 5.74e-01 -0.0807 0.143 0.925 NK_cytokine L2
ENSG00000088035 ALG6 -355532 sc-eQTL 4.02e-01 -0.136 0.162 0.925 NK_cytokine L2
ENSG00000116641 DOCK7 323657 sc-eQTL 3.33e-01 -0.145 0.15 0.925 NK_cytokine L2
ENSG00000125703 ATG4C 227911 sc-eQTL 5.01e-01 0.104 0.154 0.925 NK_cytokine L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 6.71e-01 -0.0677 0.159 0.925 NK_cytokine L2
ENSG00000162607 USP1 575746 sc-eQTL 1.02e-01 0.273 0.166 0.925 NK_cytokine L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 4.04e-01 0.142 0.169 0.925 NK_cytokine L2
ENSG00000079739 PGM1 -581368 sc-eQTL 9.14e-01 -0.0237 0.219 0.919 PB L2
ENSG00000088035 ALG6 -355532 sc-eQTL 4.01e-02 0.468 0.225 0.919 PB L2
ENSG00000116641 DOCK7 323657 sc-eQTL 2.78e-01 -0.266 0.244 0.919 PB L2
ENSG00000125703 ATG4C 227911 sc-eQTL 7.53e-01 0.0674 0.214 0.919 PB L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 7.66e-01 0.0637 0.214 0.919 PB L2
ENSG00000162607 USP1 575746 sc-eQTL 8.47e-01 0.0412 0.213 0.919 PB L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 8.58e-01 -0.0421 0.235 0.919 PB L2
ENSG00000079739 PGM1 -581368 sc-eQTL 4.14e-01 -0.124 0.151 0.922 Pro_T L2
ENSG00000088035 ALG6 -355532 sc-eQTL 6.64e-01 0.0669 0.154 0.922 Pro_T L2
ENSG00000116641 DOCK7 323657 sc-eQTL 1.37e-01 -0.23 0.154 0.922 Pro_T L2
ENSG00000125703 ATG4C 227911 sc-eQTL 2.16e-01 0.167 0.135 0.922 Pro_T L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 1.85e-01 -0.18 0.135 0.922 Pro_T L2
ENSG00000162607 USP1 575746 sc-eQTL 3.47e-01 -0.0877 0.0931 0.922 Pro_T L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 6.27e-01 -0.0766 0.158 0.922 Pro_T L2
ENSG00000079739 PGM1 -581368 sc-eQTL 2.40e-01 0.19 0.161 0.923 Treg L2
ENSG00000088035 ALG6 -355532 sc-eQTL 6.91e-01 0.0688 0.173 0.923 Treg L2
ENSG00000116641 DOCK7 323657 sc-eQTL 5.13e-01 -0.104 0.159 0.923 Treg L2
ENSG00000125703 ATG4C 227911 sc-eQTL 9.73e-01 0.00558 0.162 0.923 Treg L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 3.91e-02 0.349 0.168 0.923 Treg L2
ENSG00000162607 USP1 575746 sc-eQTL 9.19e-01 0.0167 0.164 0.923 Treg L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 3.44e-01 0.154 0.162 0.923 Treg L2
ENSG00000079739 PGM1 -581368 sc-eQTL 8.51e-01 -0.0305 0.162 0.92 cDC L2
ENSG00000088035 ALG6 -355532 sc-eQTL 5.33e-01 0.103 0.165 0.92 cDC L2
ENSG00000116641 DOCK7 323657 sc-eQTL 4.61e-01 -0.119 0.161 0.92 cDC L2
ENSG00000125703 ATG4C 227911 sc-eQTL 1.03e-01 0.228 0.139 0.92 cDC L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 7.44e-01 -0.0581 0.178 0.92 cDC L2
ENSG00000162607 USP1 575746 sc-eQTL 9.85e-01 -0.00306 0.158 0.92 cDC L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 1.20e-01 0.222 0.142 0.92 cDC L2
ENSG00000079739 PGM1 -581368 sc-eQTL 7.27e-01 0.0524 0.15 0.923 cMono_IL1B L2
ENSG00000088035 ALG6 -355532 sc-eQTL 1.74e-01 -0.204 0.15 0.923 cMono_IL1B L2
ENSG00000116641 DOCK7 323657 sc-eQTL 8.25e-01 0.0351 0.159 0.923 cMono_IL1B L2
ENSG00000125703 ATG4C 227911 sc-eQTL 8.98e-01 0.0143 0.112 0.923 cMono_IL1B L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 7.90e-01 0.0421 0.158 0.923 cMono_IL1B L2
ENSG00000162607 USP1 575746 sc-eQTL 8.84e-02 -0.237 0.138 0.923 cMono_IL1B L2
ENSG00000240563 L1TD1 817194 sc-eQTL 9.26e-01 0.013 0.14 0.923 cMono_IL1B L2
ENSG00000079739 PGM1 -581368 sc-eQTL 5.01e-01 0.112 0.167 0.923 cMono_S100A L2
ENSG00000088035 ALG6 -355532 sc-eQTL 4.56e-01 0.126 0.169 0.923 cMono_S100A L2
ENSG00000116641 DOCK7 323657 sc-eQTL 5.60e-01 -0.0916 0.157 0.923 cMono_S100A L2
ENSG00000125703 ATG4C 227911 sc-eQTL 4.24e-01 -0.109 0.136 0.923 cMono_S100A L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 7.37e-01 -0.0515 0.153 0.923 cMono_S100A L2
ENSG00000162607 USP1 575746 sc-eQTL 6.01e-01 -0.0825 0.158 0.923 cMono_S100A L2
ENSG00000240563 L1TD1 817194 sc-eQTL 8.15e-01 0.0307 0.131 0.923 cMono_S100A L2
ENSG00000079739 PGM1 -581368 sc-eQTL 7.67e-01 -0.053 0.179 0.918 gdT L2
ENSG00000088035 ALG6 -355532 sc-eQTL 1.86e-01 0.252 0.189 0.918 gdT L2
ENSG00000116641 DOCK7 323657 sc-eQTL 2.52e-01 -0.214 0.186 0.918 gdT L2
ENSG00000125703 ATG4C 227911 sc-eQTL 6.85e-01 0.0725 0.179 0.918 gdT L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 6.03e-01 -0.0989 0.19 0.918 gdT L2
ENSG00000162607 USP1 575746 sc-eQTL 5.49e-02 -0.343 0.177 0.918 gdT L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 8.57e-01 -0.0337 0.187 0.918 gdT L2
ENSG00000079739 PGM1 -581368 sc-eQTL 8.72e-01 -0.0274 0.17 0.922 intMono L2
ENSG00000088035 ALG6 -355532 sc-eQTL 7.36e-01 -0.0533 0.158 0.922 intMono L2
ENSG00000116641 DOCK7 323657 sc-eQTL 1.01e-02 0.413 0.159 0.922 intMono L2
ENSG00000125703 ATG4C 227911 sc-eQTL 9.68e-01 0.00628 0.154 0.922 intMono L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 5.94e-01 -0.0905 0.17 0.922 intMono L2
ENSG00000162607 USP1 575746 sc-eQTL 1.10e-01 0.275 0.172 0.922 intMono L2
ENSG00000240563 L1TD1 817194 sc-eQTL 9.55e-01 0.00722 0.127 0.922 intMono L2
ENSG00000079739 PGM1 -581368 sc-eQTL 9.66e-01 0.00644 0.149 0.919 ncMono L2
ENSG00000088035 ALG6 -355532 sc-eQTL 3.74e-01 -0.146 0.164 0.919 ncMono L2
ENSG00000116641 DOCK7 323657 sc-eQTL 2.82e-01 0.174 0.161 0.919 ncMono L2
ENSG00000125703 ATG4C 227911 sc-eQTL 5.54e-01 -0.0895 0.151 0.919 ncMono L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 7.39e-01 -0.0527 0.158 0.919 ncMono L2
ENSG00000162607 USP1 575746 sc-eQTL 8.89e-01 -0.0225 0.161 0.919 ncMono L2
ENSG00000240563 L1TD1 817194 sc-eQTL 5.42e-01 0.0699 0.114 0.919 ncMono L2
ENSG00000079739 PGM1 -581368 sc-eQTL 5.14e-01 0.117 0.179 0.924 pDC L2
ENSG00000088035 ALG6 -355532 sc-eQTL 6.43e-01 -0.0812 0.175 0.924 pDC L2
ENSG00000116641 DOCK7 323657 sc-eQTL 7.83e-01 -0.0494 0.179 0.924 pDC L2
ENSG00000125703 ATG4C 227911 sc-eQTL 1.76e-01 0.217 0.159 0.924 pDC L2
ENSG00000142856 ITGB3BP -581678 sc-eQTL 5.88e-01 0.0976 0.18 0.924 pDC L2
ENSG00000162607 USP1 575746 sc-eQTL 2.34e-01 0.218 0.182 0.924 pDC L2
ENSG00000203965 EFCAB7 -511329 sc-eQTL 2.82e-01 0.171 0.159 0.924 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -581368 sc-eQTL 3.96e-01 -0.135 0.158 0.923 B_Memory LOneK1K
ENSG00000088035 ALG6 -355532 sc-eQTL 6.34e-01 -0.0835 0.175 0.923 B_Memory LOneK1K
ENSG00000116641 DOCK7 323657 sc-eQTL 7.50e-01 0.0485 0.152 0.923 B_Memory LOneK1K
ENSG00000125703 ATG4C 227911 sc-eQTL 5.83e-01 0.0674 0.123 0.923 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -581678 sc-eQTL 1.51e-01 0.231 0.161 0.923 B_Memory LOneK1K
ENSG00000162607 USP1 575746 sc-eQTL 7.08e-01 -0.0589 0.157 0.923 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -511329 sc-eQTL 5.04e-01 -0.113 0.168 0.923 B_Memory LOneK1K
ENSG00000079739 PGM1 -581368 sc-eQTL 9.74e-01 0.00531 0.164 0.923 B_Naive LOneK1K
ENSG00000088035 ALG6 -355532 sc-eQTL 3.73e-01 0.151 0.169 0.923 B_Naive LOneK1K
ENSG00000116641 DOCK7 323657 sc-eQTL 7.65e-01 -0.0473 0.158 0.923 B_Naive LOneK1K
ENSG00000125703 ATG4C 227911 sc-eQTL 5.99e-01 0.0635 0.12 0.923 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -581678 sc-eQTL 6.36e-01 -0.0808 0.17 0.923 B_Naive LOneK1K
ENSG00000162607 USP1 575746 sc-eQTL 4.45e-01 -0.112 0.146 0.923 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -511329 sc-eQTL 4.44e-01 0.131 0.171 0.923 B_Naive LOneK1K
ENSG00000079739 PGM1 -581368 sc-eQTL 3.87e-01 0.133 0.153 0.923 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -355532 sc-eQTL 6.21e-01 -0.0737 0.149 0.923 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 323657 sc-eQTL 9.93e-01 -0.00124 0.15 0.923 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 227911 sc-eQTL 6.77e-01 -0.0433 0.104 0.923 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -581678 sc-eQTL 9.54e-01 -0.00882 0.153 0.923 CD14_Mono LOneK1K
ENSG00000162607 USP1 575746 sc-eQTL 2.01e-01 -0.167 0.13 0.923 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 817194 sc-eQTL 9.89e-01 0.00196 0.142 0.923 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -581368 sc-eQTL 8.59e-01 -0.0262 0.147 0.922 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -355532 sc-eQTL 5.70e-01 -0.0949 0.167 0.922 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 323657 sc-eQTL 1.60e-02 0.396 0.163 0.922 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 227911 sc-eQTL 6.46e-01 -0.0648 0.141 0.922 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -581678 sc-eQTL 4.25e-01 -0.131 0.163 0.922 CD16_Mono LOneK1K
ENSG00000162607 USP1 575746 sc-eQTL 4.23e-01 0.123 0.154 0.922 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 817194 sc-eQTL 5.72e-01 0.0593 0.105 0.922 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -581368 sc-eQTL 6.08e-01 -0.0653 0.127 0.925 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -355532 sc-eQTL 5.08e-01 -0.101 0.153 0.925 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 323657 sc-eQTL 7.74e-01 -0.0394 0.137 0.925 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 227911 sc-eQTL 9.72e-01 -0.00479 0.137 0.925 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -581678 sc-eQTL 5.28e-01 -0.102 0.162 0.925 NK_CD56dim LOneK1K
ENSG00000162607 USP1 575746 sc-eQTL 5.01e-03 0.409 0.144 0.925 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -511329 sc-eQTL 4.26e-01 0.143 0.179 0.925 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -581368 eQTL 0.0274 -0.0713 0.0323 0.0 0.0 0.0854
ENSG00000116652 DLEU2L -535039 eQTL 0.0482 0.0928 0.0469 0.00109 0.0 0.0854

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000203965 \N -511329 5.74e-07 4e-07 1.07e-07 3.48e-07 9.26e-08 1.71e-07 4.53e-07 1.31e-07 3.51e-07 2.16e-07 4.39e-07 3.27e-07 5.81e-07 1.07e-07 1.68e-07 2.05e-07 2.34e-07 3.39e-07 1.89e-07 1.43e-07 2.05e-07 3.34e-07 3.04e-07 1.25e-07 5.53e-07 2.39e-07 2.52e-07 2.65e-07 3e-07 4.3e-07 2.11e-07 6.63e-08 4.55e-08 1.19e-07 2.7e-07 1.28e-07 1.08e-07 8.15e-08 5.67e-08 5.77e-08 9.77e-08 4.16e-07 2.8e-08 1.88e-08 1.23e-07 1.25e-08 1.01e-07 2.31e-08 5.96e-08