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Genes within 1Mb (chr1:62994356:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -599055 sc-eQTL 4.04e-01 -0.105 0.126 0.897 B L1
ENSG00000088035 ALG6 -373219 sc-eQTL 1.98e-01 -0.168 0.13 0.897 B L1
ENSG00000116641 DOCK7 305970 sc-eQTL 4.94e-01 0.0893 0.13 0.897 B L1
ENSG00000125703 ATG4C 210224 sc-eQTL 6.00e-01 0.0476 0.0907 0.897 B L1
ENSG00000142856 ITGB3BP -599365 sc-eQTL 2.81e-01 0.155 0.144 0.897 B L1
ENSG00000162607 USP1 558059 sc-eQTL 4.78e-01 -0.089 0.125 0.897 B L1
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.28e-02 -0.256 0.147 0.897 B L1
ENSG00000079739 PGM1 -599055 sc-eQTL 8.43e-01 0.0219 0.11 0.897 CD4T L1
ENSG00000088035 ALG6 -373219 sc-eQTL 7.54e-01 0.0382 0.122 0.897 CD4T L1
ENSG00000116641 DOCK7 305970 sc-eQTL 5.81e-01 0.068 0.123 0.897 CD4T L1
ENSG00000125703 ATG4C 210224 sc-eQTL 3.74e-01 0.0886 0.0994 0.897 CD4T L1
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.26e-01 -0.031 0.141 0.897 CD4T L1
ENSG00000162607 USP1 558059 sc-eQTL 6.46e-01 -0.0444 0.0965 0.897 CD4T L1
ENSG00000203965 EFCAB7 -529016 sc-eQTL 2.41e-01 -0.149 0.126 0.897 CD4T L1
ENSG00000079739 PGM1 -599055 sc-eQTL 2.70e-01 -0.134 0.121 0.897 CD8T L1
ENSG00000088035 ALG6 -373219 sc-eQTL 1.01e-01 0.22 0.133 0.897 CD8T L1
ENSG00000116641 DOCK7 305970 sc-eQTL 2.80e-01 -0.147 0.135 0.897 CD8T L1
ENSG00000125703 ATG4C 210224 sc-eQTL 2.86e-01 -0.137 0.129 0.897 CD8T L1
ENSG00000142856 ITGB3BP -599365 sc-eQTL 7.75e-01 -0.0413 0.144 0.897 CD8T L1
ENSG00000162607 USP1 558059 sc-eQTL 9.67e-01 0.00459 0.112 0.897 CD8T L1
ENSG00000203965 EFCAB7 -529016 sc-eQTL 6.83e-01 -0.0588 0.144 0.897 CD8T L1
ENSG00000079739 PGM1 -599055 sc-eQTL 6.34e-02 0.241 0.129 0.894 DC L1
ENSG00000088035 ALG6 -373219 sc-eQTL 4.55e-01 -0.1 0.134 0.894 DC L1
ENSG00000116641 DOCK7 305970 sc-eQTL 5.14e-01 0.0898 0.137 0.894 DC L1
ENSG00000125703 ATG4C 210224 sc-eQTL 2.92e-01 -0.113 0.107 0.894 DC L1
ENSG00000142856 ITGB3BP -599365 sc-eQTL 4.40e-01 -0.116 0.15 0.894 DC L1
ENSG00000162607 USP1 558059 sc-eQTL 1.73e-02 0.311 0.13 0.894 DC L1
ENSG00000203965 EFCAB7 -529016 sc-eQTL 1.17e-01 0.205 0.13 0.894 DC L1
ENSG00000079739 PGM1 -599055 sc-eQTL 2.82e-01 0.138 0.128 0.897 Mono L1
ENSG00000088035 ALG6 -373219 sc-eQTL 8.41e-01 0.027 0.134 0.897 Mono L1
ENSG00000116641 DOCK7 305970 sc-eQTL 2.07e-01 0.164 0.129 0.897 Mono L1
ENSG00000125703 ATG4C 210224 sc-eQTL 8.82e-01 0.013 0.0877 0.897 Mono L1
ENSG00000142856 ITGB3BP -599365 sc-eQTL 6.02e-01 0.0724 0.138 0.897 Mono L1
ENSG00000162607 USP1 558059 sc-eQTL 8.37e-03 -0.298 0.112 0.897 Mono L1
ENSG00000240563 L1TD1 799507 sc-eQTL 7.79e-01 -0.0298 0.106 0.897 Mono L1
ENSG00000079739 PGM1 -599055 sc-eQTL 5.02e-01 -0.0747 0.111 0.897 NK L1
ENSG00000088035 ALG6 -373219 sc-eQTL 5.12e-01 -0.0856 0.13 0.897 NK L1
ENSG00000116641 DOCK7 305970 sc-eQTL 3.56e-01 0.0992 0.107 0.897 NK L1
ENSG00000125703 ATG4C 210224 sc-eQTL 1.44e-01 -0.168 0.115 0.897 NK L1
ENSG00000142856 ITGB3BP -599365 sc-eQTL 9.78e-01 -0.00401 0.143 0.897 NK L1
ENSG00000162607 USP1 558059 sc-eQTL 7.41e-01 -0.0425 0.128 0.897 NK L1
ENSG00000203965 EFCAB7 -529016 sc-eQTL 5.06e-01 0.104 0.155 0.897 NK L1
ENSG00000079739 PGM1 -599055 sc-eQTL 1.31e-01 -0.192 0.127 0.897 Other_T L1
ENSG00000088035 ALG6 -373219 sc-eQTL 2.96e-01 -0.134 0.128 0.897 Other_T L1
ENSG00000116641 DOCK7 305970 sc-eQTL 7.06e-01 -0.0495 0.131 0.897 Other_T L1
ENSG00000125703 ATG4C 210224 sc-eQTL 8.83e-01 -0.0166 0.113 0.897 Other_T L1
ENSG00000142856 ITGB3BP -599365 sc-eQTL 2.50e-01 -0.116 0.1 0.897 Other_T L1
ENSG00000162607 USP1 558059 sc-eQTL 1.88e-01 0.114 0.0867 0.897 Other_T L1
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.25e-01 -0.0343 0.155 0.897 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -599055 sc-eQTL 9.23e-01 -0.0174 0.181 0.903 B_Activated L2
ENSG00000088035 ALG6 -373219 sc-eQTL 3.27e-01 0.17 0.173 0.903 B_Activated L2
ENSG00000116641 DOCK7 305970 sc-eQTL 7.70e-01 0.0473 0.161 0.903 B_Activated L2
ENSG00000125703 ATG4C 210224 sc-eQTL 3.11e-01 -0.172 0.169 0.903 B_Activated L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.96e-01 0.0217 0.166 0.903 B_Activated L2
ENSG00000162607 USP1 558059 sc-eQTL 7.75e-01 0.0514 0.18 0.903 B_Activated L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 1.03e-01 -0.255 0.156 0.903 B_Activated L2
ENSG00000079739 PGM1 -599055 sc-eQTL 2.15e-01 -0.187 0.151 0.899 B_Intermediate L2
ENSG00000088035 ALG6 -373219 sc-eQTL 1.55e-01 0.218 0.153 0.899 B_Intermediate L2
ENSG00000116641 DOCK7 305970 sc-eQTL 3.37e-01 0.141 0.146 0.899 B_Intermediate L2
ENSG00000125703 ATG4C 210224 sc-eQTL 5.40e-01 -0.0761 0.124 0.899 B_Intermediate L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 1.05e-01 0.239 0.147 0.899 B_Intermediate L2
ENSG00000162607 USP1 558059 sc-eQTL 5.12e-01 0.0969 0.148 0.899 B_Intermediate L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 9.27e-02 -0.246 0.146 0.899 B_Intermediate L2
ENSG00000079739 PGM1 -599055 sc-eQTL 2.23e-01 -0.182 0.149 0.897 B_Memory L2
ENSG00000088035 ALG6 -373219 sc-eQTL 2.64e-01 -0.17 0.152 0.897 B_Memory L2
ENSG00000116641 DOCK7 305970 sc-eQTL 8.12e-02 0.249 0.142 0.897 B_Memory L2
ENSG00000125703 ATG4C 210224 sc-eQTL 3.52e-01 0.126 0.136 0.897 B_Memory L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 4.16e-01 0.126 0.155 0.897 B_Memory L2
ENSG00000162607 USP1 558059 sc-eQTL 3.92e-01 0.134 0.157 0.897 B_Memory L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 3.75e-01 0.137 0.154 0.897 B_Memory L2
ENSG00000079739 PGM1 -599055 sc-eQTL 1.06e-01 -0.241 0.148 0.897 B_Naive1 L2
ENSG00000088035 ALG6 -373219 sc-eQTL 1.29e-01 -0.227 0.149 0.897 B_Naive1 L2
ENSG00000116641 DOCK7 305970 sc-eQTL 6.47e-01 -0.0659 0.144 0.897 B_Naive1 L2
ENSG00000125703 ATG4C 210224 sc-eQTL 2.05e-01 0.14 0.11 0.897 B_Naive1 L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 7.58e-01 0.0453 0.147 0.897 B_Naive1 L2
ENSG00000162607 USP1 558059 sc-eQTL 2.92e-01 -0.136 0.129 0.897 B_Naive1 L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 1.84e-01 -0.208 0.156 0.897 B_Naive1 L2
ENSG00000079739 PGM1 -599055 sc-eQTL 3.77e-01 0.13 0.147 0.897 B_Naive2 L2
ENSG00000088035 ALG6 -373219 sc-eQTL 8.31e-01 -0.0328 0.153 0.897 B_Naive2 L2
ENSG00000116641 DOCK7 305970 sc-eQTL 3.27e-01 0.145 0.147 0.897 B_Naive2 L2
ENSG00000125703 ATG4C 210224 sc-eQTL 4.82e-01 0.0997 0.142 0.897 B_Naive2 L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.31e-01 0.0328 0.154 0.897 B_Naive2 L2
ENSG00000162607 USP1 558059 sc-eQTL 2.65e-02 -0.323 0.145 0.897 B_Naive2 L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 2.47e-01 0.177 0.153 0.897 B_Naive2 L2
ENSG00000079739 PGM1 -599055 sc-eQTL 5.25e-01 0.0956 0.15 0.898 CD4_CTL L2
ENSG00000088035 ALG6 -373219 sc-eQTL 2.18e-01 -0.196 0.158 0.898 CD4_CTL L2
ENSG00000116641 DOCK7 305970 sc-eQTL 5.73e-01 0.0782 0.139 0.898 CD4_CTL L2
ENSG00000125703 ATG4C 210224 sc-eQTL 9.60e-01 -0.00726 0.144 0.898 CD4_CTL L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 4.16e-01 -0.125 0.153 0.898 CD4_CTL L2
ENSG00000162607 USP1 558059 sc-eQTL 4.34e-01 0.114 0.146 0.898 CD4_CTL L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.84e-01 -0.0214 0.146 0.898 CD4_CTL L2
ENSG00000079739 PGM1 -599055 sc-eQTL 6.67e-01 -0.0532 0.123 0.897 CD4_Naive L2
ENSG00000088035 ALG6 -373219 sc-eQTL 8.89e-01 -0.0188 0.134 0.897 CD4_Naive L2
ENSG00000116641 DOCK7 305970 sc-eQTL 8.41e-01 -0.0265 0.132 0.897 CD4_Naive L2
ENSG00000125703 ATG4C 210224 sc-eQTL 2.25e-01 0.141 0.116 0.897 CD4_Naive L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.53e-01 -0.0263 0.142 0.897 CD4_Naive L2
ENSG00000162607 USP1 558059 sc-eQTL 1.43e-01 -0.159 0.108 0.897 CD4_Naive L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 2.87e-01 -0.151 0.141 0.897 CD4_Naive L2
ENSG00000079739 PGM1 -599055 sc-eQTL 9.82e-01 0.00291 0.129 0.897 CD4_TCM L2
ENSG00000088035 ALG6 -373219 sc-eQTL 3.41e-01 0.142 0.149 0.897 CD4_TCM L2
ENSG00000116641 DOCK7 305970 sc-eQTL 1.10e-01 0.211 0.132 0.897 CD4_TCM L2
ENSG00000125703 ATG4C 210224 sc-eQTL 9.68e-01 0.00525 0.129 0.897 CD4_TCM L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 4.42e-01 0.117 0.152 0.897 CD4_TCM L2
ENSG00000162607 USP1 558059 sc-eQTL 7.71e-01 -0.0363 0.125 0.897 CD4_TCM L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 6.88e-01 -0.0592 0.147 0.897 CD4_TCM L2
ENSG00000079739 PGM1 -599055 sc-eQTL 8.26e-02 0.263 0.151 0.897 CD4_TEM L2
ENSG00000088035 ALG6 -373219 sc-eQTL 7.47e-01 0.0492 0.152 0.897 CD4_TEM L2
ENSG00000116641 DOCK7 305970 sc-eQTL 7.54e-01 -0.0466 0.149 0.897 CD4_TEM L2
ENSG00000125703 ATG4C 210224 sc-eQTL 5.81e-01 0.0797 0.144 0.897 CD4_TEM L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.36e-01 -0.0308 0.149 0.897 CD4_TEM L2
ENSG00000162607 USP1 558059 sc-eQTL 2.17e-02 -0.323 0.139 0.897 CD4_TEM L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 2.68e-02 -0.34 0.153 0.897 CD4_TEM L2
ENSG00000079739 PGM1 -599055 sc-eQTL 2.91e-02 -0.295 0.134 0.897 CD8_CTL L2
ENSG00000088035 ALG6 -373219 sc-eQTL 4.13e-01 0.118 0.144 0.897 CD8_CTL L2
ENSG00000116641 DOCK7 305970 sc-eQTL 4.90e-01 0.0945 0.137 0.897 CD8_CTL L2
ENSG00000125703 ATG4C 210224 sc-eQTL 8.49e-01 -0.0277 0.146 0.897 CD8_CTL L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 6.90e-01 -0.0604 0.151 0.897 CD8_CTL L2
ENSG00000162607 USP1 558059 sc-eQTL 7.33e-01 -0.0462 0.136 0.897 CD8_CTL L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 6.16e-02 0.289 0.154 0.897 CD8_CTL L2
ENSG00000079739 PGM1 -599055 sc-eQTL 7.13e-01 0.0505 0.137 0.897 CD8_Naive L2
ENSG00000088035 ALG6 -373219 sc-eQTL 3.43e-01 0.135 0.142 0.897 CD8_Naive L2
ENSG00000116641 DOCK7 305970 sc-eQTL 1.46e-02 -0.356 0.145 0.897 CD8_Naive L2
ENSG00000125703 ATG4C 210224 sc-eQTL 3.91e-01 -0.121 0.141 0.897 CD8_Naive L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.35e-01 -0.0297 0.143 0.897 CD8_Naive L2
ENSG00000162607 USP1 558059 sc-eQTL 6.06e-01 -0.0622 0.12 0.897 CD8_Naive L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 1.72e-01 -0.183 0.134 0.897 CD8_Naive L2
ENSG00000079739 PGM1 -599055 sc-eQTL 2.01e-01 -0.192 0.149 0.891 CD8_TCM L2
ENSG00000088035 ALG6 -373219 sc-eQTL 1.23e-02 0.378 0.149 0.891 CD8_TCM L2
ENSG00000116641 DOCK7 305970 sc-eQTL 3.03e-01 -0.153 0.148 0.891 CD8_TCM L2
ENSG00000125703 ATG4C 210224 sc-eQTL 5.70e-01 -0.0862 0.151 0.891 CD8_TCM L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 4.79e-01 -0.104 0.147 0.891 CD8_TCM L2
ENSG00000162607 USP1 558059 sc-eQTL 6.99e-01 -0.0549 0.142 0.891 CD8_TCM L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 2.06e-01 -0.19 0.15 0.891 CD8_TCM L2
ENSG00000079739 PGM1 -599055 sc-eQTL 7.39e-03 -0.417 0.154 0.902 CD8_TEM L2
ENSG00000088035 ALG6 -373219 sc-eQTL 7.60e-01 -0.0482 0.157 0.902 CD8_TEM L2
ENSG00000116641 DOCK7 305970 sc-eQTL 5.74e-01 0.0857 0.152 0.902 CD8_TEM L2
ENSG00000125703 ATG4C 210224 sc-eQTL 7.69e-01 0.0432 0.147 0.902 CD8_TEM L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 6.09e-01 -0.0814 0.159 0.902 CD8_TEM L2
ENSG00000162607 USP1 558059 sc-eQTL 1.74e-01 -0.206 0.151 0.902 CD8_TEM L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.72e-02 -0.263 0.153 0.902 CD8_TEM L2
ENSG00000079739 PGM1 -599055 sc-eQTL 7.07e-01 -0.0556 0.148 0.9 MAIT L2
ENSG00000088035 ALG6 -373219 sc-eQTL 5.90e-01 -0.0789 0.146 0.9 MAIT L2
ENSG00000116641 DOCK7 305970 sc-eQTL 4.99e-02 -0.274 0.139 0.9 MAIT L2
ENSG00000125703 ATG4C 210224 sc-eQTL 8.44e-01 0.0291 0.148 0.9 MAIT L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 5.24e-01 -0.0945 0.148 0.9 MAIT L2
ENSG00000162607 USP1 558059 sc-eQTL 4.79e-01 0.104 0.147 0.9 MAIT L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.48e-01 -0.0293 0.152 0.9 MAIT L2
ENSG00000079739 PGM1 -599055 sc-eQTL 7.21e-01 0.0538 0.15 0.898 NK_CD56bright L2
ENSG00000088035 ALG6 -373219 sc-eQTL 5.50e-01 -0.0922 0.154 0.898 NK_CD56bright L2
ENSG00000116641 DOCK7 305970 sc-eQTL 3.27e-01 0.131 0.133 0.898 NK_CD56bright L2
ENSG00000125703 ATG4C 210224 sc-eQTL 3.08e-01 -0.152 0.149 0.898 NK_CD56bright L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 2.84e-01 0.167 0.155 0.898 NK_CD56bright L2
ENSG00000162607 USP1 558059 sc-eQTL 3.98e-01 -0.136 0.16 0.898 NK_CD56bright L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 2.14e-01 0.19 0.153 0.898 NK_CD56bright L2
ENSG00000079739 PGM1 -599055 sc-eQTL 8.10e-01 -0.0278 0.116 0.897 NK_CD56dim L2
ENSG00000088035 ALG6 -373219 sc-eQTL 2.75e-01 -0.16 0.146 0.897 NK_CD56dim L2
ENSG00000116641 DOCK7 305970 sc-eQTL 2.77e-01 0.139 0.127 0.897 NK_CD56dim L2
ENSG00000125703 ATG4C 210224 sc-eQTL 9.85e-01 0.00236 0.13 0.897 NK_CD56dim L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.42e-01 0.0295 0.148 0.897 NK_CD56dim L2
ENSG00000162607 USP1 558059 sc-eQTL 2.29e-01 -0.172 0.143 0.897 NK_CD56dim L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 7.13e-01 -0.0586 0.159 0.897 NK_CD56dim L2
ENSG00000079739 PGM1 -599055 sc-eQTL 7.02e-01 0.0595 0.155 0.9 NK_HLA L2
ENSG00000088035 ALG6 -373219 sc-eQTL 9.99e-01 -0.000255 0.161 0.9 NK_HLA L2
ENSG00000116641 DOCK7 305970 sc-eQTL 7.43e-01 -0.0404 0.123 0.9 NK_HLA L2
ENSG00000125703 ATG4C 210224 sc-eQTL 4.26e-02 -0.289 0.142 0.9 NK_HLA L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 4.68e-01 -0.109 0.15 0.9 NK_HLA L2
ENSG00000162607 USP1 558059 sc-eQTL 8.38e-01 -0.0322 0.157 0.9 NK_HLA L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.36e-01 0.0297 0.143 0.9 NK_HLA L2
ENSG00000079739 PGM1 -599055 sc-eQTL 9.06e-01 0.0151 0.127 0.897 NK_cytokine L2
ENSG00000088035 ALG6 -373219 sc-eQTL 9.53e-01 0.00849 0.144 0.897 NK_cytokine L2
ENSG00000116641 DOCK7 305970 sc-eQTL 2.07e-01 0.168 0.133 0.897 NK_cytokine L2
ENSG00000125703 ATG4C 210224 sc-eQTL 7.97e-01 -0.0351 0.136 0.897 NK_cytokine L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 3.41e-01 0.134 0.141 0.897 NK_cytokine L2
ENSG00000162607 USP1 558059 sc-eQTL 2.17e-01 0.183 0.148 0.897 NK_cytokine L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.56e-01 0.0274 0.15 0.897 NK_cytokine L2
ENSG00000079739 PGM1 -599055 sc-eQTL 7.71e-01 -0.0523 0.179 0.896 PB L2
ENSG00000088035 ALG6 -373219 sc-eQTL 8.16e-01 0.0439 0.188 0.896 PB L2
ENSG00000116641 DOCK7 305970 sc-eQTL 2.87e-01 -0.214 0.2 0.896 PB L2
ENSG00000125703 ATG4C 210224 sc-eQTL 5.72e-01 0.0993 0.175 0.896 PB L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.17e-01 -0.0407 0.175 0.896 PB L2
ENSG00000162607 USP1 558059 sc-eQTL 5.08e-02 -0.338 0.171 0.896 PB L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 6.87e-01 -0.0775 0.192 0.896 PB L2
ENSG00000079739 PGM1 -599055 sc-eQTL 3.24e-01 -0.136 0.137 0.896 Pro_T L2
ENSG00000088035 ALG6 -373219 sc-eQTL 3.47e-01 -0.132 0.14 0.896 Pro_T L2
ENSG00000116641 DOCK7 305970 sc-eQTL 7.16e-01 0.0512 0.14 0.896 Pro_T L2
ENSG00000125703 ATG4C 210224 sc-eQTL 2.21e-01 0.15 0.122 0.896 Pro_T L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 6.74e-01 -0.052 0.123 0.896 Pro_T L2
ENSG00000162607 USP1 558059 sc-eQTL 7.50e-01 -0.0271 0.0847 0.896 Pro_T L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 9.93e-01 -0.00124 0.143 0.896 Pro_T L2
ENSG00000079739 PGM1 -599055 sc-eQTL 4.36e-01 -0.114 0.147 0.897 Treg L2
ENSG00000088035 ALG6 -373219 sc-eQTL 5.61e-01 0.0914 0.157 0.897 Treg L2
ENSG00000116641 DOCK7 305970 sc-eQTL 3.94e-01 0.123 0.144 0.897 Treg L2
ENSG00000125703 ATG4C 210224 sc-eQTL 1.05e-02 -0.375 0.145 0.897 Treg L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 3.81e-01 -0.135 0.154 0.897 Treg L2
ENSG00000162607 USP1 558059 sc-eQTL 3.66e-01 0.135 0.149 0.897 Treg L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 2.01e-01 0.188 0.147 0.897 Treg L2
ENSG00000079739 PGM1 -599055 sc-eQTL 6.30e-01 0.0696 0.144 0.9 cDC L2
ENSG00000088035 ALG6 -373219 sc-eQTL 4.90e-01 -0.101 0.146 0.9 cDC L2
ENSG00000116641 DOCK7 305970 sc-eQTL 5.90e-01 -0.0773 0.143 0.9 cDC L2
ENSG00000125703 ATG4C 210224 sc-eQTL 6.00e-01 -0.0654 0.125 0.9 cDC L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 9.91e-01 0.00183 0.158 0.9 cDC L2
ENSG00000162607 USP1 558059 sc-eQTL 4.14e-02 0.286 0.139 0.9 cDC L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 3.88e-01 0.109 0.127 0.9 cDC L2
ENSG00000079739 PGM1 -599055 sc-eQTL 9.78e-01 0.00377 0.134 0.897 cMono_IL1B L2
ENSG00000088035 ALG6 -373219 sc-eQTL 1.01e-01 0.221 0.134 0.897 cMono_IL1B L2
ENSG00000116641 DOCK7 305970 sc-eQTL 1.64e-01 0.197 0.141 0.897 cMono_IL1B L2
ENSG00000125703 ATG4C 210224 sc-eQTL 4.07e-01 0.0827 0.0996 0.897 cMono_IL1B L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 6.14e-01 0.0714 0.141 0.897 cMono_IL1B L2
ENSG00000162607 USP1 558059 sc-eQTL 3.28e-01 -0.122 0.124 0.897 cMono_IL1B L2
ENSG00000240563 L1TD1 799507 sc-eQTL 7.47e-01 0.0405 0.125 0.897 cMono_IL1B L2
ENSG00000079739 PGM1 -599055 sc-eQTL 8.41e-02 0.256 0.148 0.897 cMono_S100A L2
ENSG00000088035 ALG6 -373219 sc-eQTL 1.24e-01 -0.231 0.15 0.897 cMono_S100A L2
ENSG00000116641 DOCK7 305970 sc-eQTL 6.40e-01 -0.0654 0.14 0.897 cMono_S100A L2
ENSG00000125703 ATG4C 210224 sc-eQTL 5.42e-01 -0.0739 0.121 0.897 cMono_S100A L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 4.43e-01 -0.105 0.136 0.897 cMono_S100A L2
ENSG00000162607 USP1 558059 sc-eQTL 6.20e-02 -0.261 0.139 0.897 cMono_S100A L2
ENSG00000240563 L1TD1 799507 sc-eQTL 9.38e-02 0.196 0.116 0.897 cMono_S100A L2
ENSG00000079739 PGM1 -599055 sc-eQTL 2.37e-01 -0.205 0.173 0.912 gdT L2
ENSG00000088035 ALG6 -373219 sc-eQTL 3.64e-01 0.168 0.185 0.912 gdT L2
ENSG00000116641 DOCK7 305970 sc-eQTL 6.89e-01 0.0729 0.182 0.912 gdT L2
ENSG00000125703 ATG4C 210224 sc-eQTL 7.20e-01 0.0623 0.173 0.912 gdT L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.23e-01 0.0413 0.184 0.912 gdT L2
ENSG00000162607 USP1 558059 sc-eQTL 3.24e-01 0.172 0.174 0.912 gdT L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 8.37e-01 0.0374 0.181 0.912 gdT L2
ENSG00000079739 PGM1 -599055 sc-eQTL 4.68e-01 0.107 0.148 0.896 intMono L2
ENSG00000088035 ALG6 -373219 sc-eQTL 9.51e-02 0.229 0.137 0.896 intMono L2
ENSG00000116641 DOCK7 305970 sc-eQTL 7.83e-01 -0.0387 0.141 0.896 intMono L2
ENSG00000125703 ATG4C 210224 sc-eQTL 2.98e-01 -0.14 0.134 0.896 intMono L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 5.13e-01 0.097 0.148 0.896 intMono L2
ENSG00000162607 USP1 558059 sc-eQTL 8.75e-01 0.0238 0.15 0.896 intMono L2
ENSG00000240563 L1TD1 799507 sc-eQTL 3.10e-01 0.112 0.11 0.896 intMono L2
ENSG00000079739 PGM1 -599055 sc-eQTL 2.76e-01 0.149 0.137 0.9 ncMono L2
ENSG00000088035 ALG6 -373219 sc-eQTL 9.33e-01 -0.0127 0.151 0.9 ncMono L2
ENSG00000116641 DOCK7 305970 sc-eQTL 1.89e-01 0.195 0.148 0.9 ncMono L2
ENSG00000125703 ATG4C 210224 sc-eQTL 1.20e-01 0.215 0.138 0.9 ncMono L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 2.10e-01 0.182 0.144 0.9 ncMono L2
ENSG00000162607 USP1 558059 sc-eQTL 5.47e-01 -0.0894 0.148 0.9 ncMono L2
ENSG00000240563 L1TD1 799507 sc-eQTL 5.20e-01 -0.0676 0.105 0.9 ncMono L2
ENSG00000079739 PGM1 -599055 sc-eQTL 6.26e-02 0.292 0.155 0.898 pDC L2
ENSG00000088035 ALG6 -373219 sc-eQTL 2.29e-01 -0.184 0.152 0.898 pDC L2
ENSG00000116641 DOCK7 305970 sc-eQTL 5.09e-02 0.304 0.154 0.898 pDC L2
ENSG00000125703 ATG4C 210224 sc-eQTL 5.62e-01 -0.0813 0.14 0.898 pDC L2
ENSG00000142856 ITGB3BP -599365 sc-eQTL 5.14e-01 -0.103 0.157 0.898 pDC L2
ENSG00000162607 USP1 558059 sc-eQTL 8.33e-01 0.0339 0.16 0.898 pDC L2
ENSG00000203965 EFCAB7 -529016 sc-eQTL 5.67e-02 0.264 0.138 0.898 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -599055 sc-eQTL 3.03e-01 -0.145 0.14 0.897 B_Memory LOneK1K
ENSG00000088035 ALG6 -373219 sc-eQTL 8.09e-01 0.0376 0.156 0.897 B_Memory LOneK1K
ENSG00000116641 DOCK7 305970 sc-eQTL 7.40e-02 0.241 0.134 0.897 B_Memory LOneK1K
ENSG00000125703 ATG4C 210224 sc-eQTL 6.00e-01 -0.0572 0.109 0.897 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -599365 sc-eQTL 1.75e-01 0.194 0.143 0.897 B_Memory LOneK1K
ENSG00000162607 USP1 558059 sc-eQTL 1.16e-01 0.218 0.138 0.897 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -529016 sc-eQTL 1.33e-01 -0.224 0.149 0.897 B_Memory LOneK1K
ENSG00000079739 PGM1 -599055 sc-eQTL 5.29e-01 -0.0918 0.145 0.897 B_Naive LOneK1K
ENSG00000088035 ALG6 -373219 sc-eQTL 1.64e-01 -0.209 0.149 0.897 B_Naive LOneK1K
ENSG00000116641 DOCK7 305970 sc-eQTL 8.25e-01 0.0309 0.14 0.897 B_Naive LOneK1K
ENSG00000125703 ATG4C 210224 sc-eQTL 1.44e-01 0.156 0.106 0.897 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.28e-01 0.0328 0.151 0.897 B_Naive LOneK1K
ENSG00000162607 USP1 558059 sc-eQTL 1.34e-01 -0.194 0.129 0.897 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -529016 sc-eQTL 7.60e-01 -0.0465 0.152 0.897 B_Naive LOneK1K
ENSG00000079739 PGM1 -599055 sc-eQTL 4.67e-01 0.0993 0.136 0.897 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -373219 sc-eQTL 5.53e-01 0.0784 0.132 0.897 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 305970 sc-eQTL 4.09e-01 0.11 0.133 0.897 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 210224 sc-eQTL 9.66e-01 -0.00392 0.092 0.897 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -599365 sc-eQTL 7.27e-01 0.0476 0.136 0.897 CD14_Mono LOneK1K
ENSG00000162607 USP1 558059 sc-eQTL 5.23e-02 -0.225 0.115 0.897 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 799507 sc-eQTL 5.89e-01 0.0682 0.126 0.897 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -599055 sc-eQTL 2.34e-01 0.155 0.13 0.897 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -373219 sc-eQTL 9.13e-01 0.0162 0.148 0.897 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 305970 sc-eQTL 2.30e-01 0.176 0.146 0.897 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 210224 sc-eQTL 8.44e-01 -0.0246 0.125 0.897 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -599365 sc-eQTL 3.68e-01 0.131 0.145 0.897 CD16_Mono LOneK1K
ENSG00000162607 USP1 558059 sc-eQTL 5.42e-01 -0.0834 0.136 0.897 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 799507 sc-eQTL 7.32e-01 -0.0319 0.0931 0.897 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -599055 sc-eQTL 5.61e-01 -0.0658 0.113 0.897 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -373219 sc-eQTL 6.87e-01 -0.0547 0.136 0.897 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 305970 sc-eQTL 2.63e-01 0.136 0.121 0.897 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 210224 sc-eQTL 3.01e-01 -0.126 0.121 0.897 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -599365 sc-eQTL 8.30e-01 0.0309 0.144 0.897 NK_CD56dim LOneK1K
ENSG00000162607 USP1 558059 sc-eQTL 8.37e-01 0.0269 0.131 0.897 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -529016 sc-eQTL 9.83e-01 0.00341 0.159 0.897 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116652 \N -552726 3.77e-07 1.83e-07 6.57e-08 2.61e-07 1.05e-07 1.25e-07 2.86e-07 5.62e-08 1.71e-07 9.72e-08 1.61e-07 1.23e-07 2.45e-07 8.54e-08 7.35e-08 9.11e-08 4.31e-08 2.33e-07 8.93e-08 8.87e-08 1.24e-07 1.65e-07 1.75e-07 3.59e-08 2.28e-07 1.31e-07 1.25e-07 1.46e-07 1.37e-07 1.17e-07 1.14e-07 4.71e-08 4.86e-08 9.09e-08 1.33e-07 3.43e-08 5.45e-08 6.66e-08 5.27e-08 7.04e-08 3.31e-08 1.64e-07 5.12e-08 1.08e-08 3.29e-08 8.42e-09 7.13e-08 0.0 4.85e-08