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Genes within 1Mb (chr1:62948535:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -644876 sc-eQTL 3.27e-01 0.074 0.0753 0.481 B L1
ENSG00000088035 ALG6 -419040 sc-eQTL 7.45e-01 -0.0255 0.0782 0.481 B L1
ENSG00000116641 DOCK7 260149 sc-eQTL 1.00e+00 -3.34e-05 0.0782 0.481 B L1
ENSG00000125703 ATG4C 164403 sc-eQTL 8.61e-01 0.00954 0.0544 0.481 B L1
ENSG00000142856 ITGB3BP -645186 sc-eQTL 6.94e-01 0.0341 0.0865 0.481 B L1
ENSG00000162607 USP1 512238 sc-eQTL 4.89e-02 -0.147 0.0744 0.481 B L1
ENSG00000203965 EFCAB7 -574837 sc-eQTL 8.56e-01 0.0161 0.0886 0.481 B L1
ENSG00000079739 PGM1 -644876 sc-eQTL 1.13e-01 0.105 0.0657 0.481 CD4T L1
ENSG00000088035 ALG6 -419040 sc-eQTL 3.44e-01 -0.0691 0.0728 0.481 CD4T L1
ENSG00000116641 DOCK7 260149 sc-eQTL 9.40e-01 0.00554 0.0739 0.481 CD4T L1
ENSG00000125703 ATG4C 164403 sc-eQTL 8.18e-01 0.0138 0.0596 0.481 CD4T L1
ENSG00000142856 ITGB3BP -645186 sc-eQTL 7.15e-01 0.031 0.0847 0.481 CD4T L1
ENSG00000162607 USP1 512238 sc-eQTL 9.16e-01 0.00615 0.0579 0.481 CD4T L1
ENSG00000203965 EFCAB7 -574837 sc-eQTL 4.75e-01 -0.0543 0.0759 0.481 CD4T L1
ENSG00000079739 PGM1 -644876 sc-eQTL 4.60e-01 -0.0541 0.0731 0.481 CD8T L1
ENSG00000088035 ALG6 -419040 sc-eQTL 5.30e-01 -0.0506 0.0806 0.481 CD8T L1
ENSG00000116641 DOCK7 260149 sc-eQTL 7.79e-02 0.144 0.0811 0.481 CD8T L1
ENSG00000125703 ATG4C 164403 sc-eQTL 5.81e-01 0.0428 0.0776 0.481 CD8T L1
ENSG00000142856 ITGB3BP -645186 sc-eQTL 6.46e-01 0.0399 0.0868 0.481 CD8T L1
ENSG00000162607 USP1 512238 sc-eQTL 1.02e-01 0.11 0.0672 0.481 CD8T L1
ENSG00000203965 EFCAB7 -574837 sc-eQTL 1.40e-01 -0.127 0.0861 0.481 CD8T L1
ENSG00000079739 PGM1 -644876 sc-eQTL 1.01e-01 0.133 0.0808 0.482 DC L1
ENSG00000088035 ALG6 -419040 sc-eQTL 2.50e-01 0.0965 0.0837 0.482 DC L1
ENSG00000116641 DOCK7 260149 sc-eQTL 3.69e-02 0.179 0.0851 0.482 DC L1
ENSG00000125703 ATG4C 164403 sc-eQTL 5.14e-03 0.187 0.066 0.482 DC L1
ENSG00000142856 ITGB3BP -645186 sc-eQTL 4.17e-01 0.0765 0.0939 0.482 DC L1
ENSG00000162607 USP1 512238 sc-eQTL 8.75e-01 0.013 0.0822 0.482 DC L1
ENSG00000203965 EFCAB7 -574837 sc-eQTL 1.30e-02 0.202 0.0806 0.482 DC L1
ENSG00000079739 PGM1 -644876 sc-eQTL 1.61e-01 0.111 0.079 0.481 Mono L1
ENSG00000088035 ALG6 -419040 sc-eQTL 5.83e-01 -0.0455 0.0828 0.481 Mono L1
ENSG00000116641 DOCK7 260149 sc-eQTL 4.66e-01 0.0585 0.08 0.481 Mono L1
ENSG00000125703 ATG4C 164403 sc-eQTL 6.38e-01 -0.0255 0.0541 0.481 Mono L1
ENSG00000142856 ITGB3BP -645186 sc-eQTL 3.69e-01 -0.0769 0.0854 0.481 Mono L1
ENSG00000162607 USP1 512238 sc-eQTL 6.58e-01 -0.0312 0.0702 0.481 Mono L1
ENSG00000240563 L1TD1 753686 sc-eQTL 5.31e-01 0.0412 0.0655 0.481 Mono L1
ENSG00000079739 PGM1 -644876 sc-eQTL 5.15e-01 -0.0436 0.0668 0.481 NK L1
ENSG00000088035 ALG6 -419040 sc-eQTL 2.20e-02 0.179 0.0774 0.481 NK L1
ENSG00000116641 DOCK7 260149 sc-eQTL 7.77e-01 0.0183 0.0646 0.481 NK L1
ENSG00000125703 ATG4C 164403 sc-eQTL 5.94e-01 -0.037 0.0693 0.481 NK L1
ENSG00000142856 ITGB3BP -645186 sc-eQTL 1.37e-01 0.128 0.0857 0.481 NK L1
ENSG00000162607 USP1 512238 sc-eQTL 7.61e-01 -0.0235 0.077 0.481 NK L1
ENSG00000203965 EFCAB7 -574837 sc-eQTL 7.99e-02 -0.164 0.0929 0.481 NK L1
ENSG00000079739 PGM1 -644876 sc-eQTL 8.15e-01 0.0177 0.0758 0.481 Other_T L1
ENSG00000088035 ALG6 -419040 sc-eQTL 9.09e-01 0.00873 0.0762 0.481 Other_T L1
ENSG00000116641 DOCK7 260149 sc-eQTL 1.08e-01 0.125 0.0773 0.481 Other_T L1
ENSG00000125703 ATG4C 164403 sc-eQTL 5.83e-01 0.037 0.0673 0.481 Other_T L1
ENSG00000142856 ITGB3BP -645186 sc-eQTL 1.81e-01 0.0798 0.0595 0.481 Other_T L1
ENSG00000162607 USP1 512238 sc-eQTL 4.27e-01 -0.0411 0.0517 0.481 Other_T L1
ENSG00000203965 EFCAB7 -574837 sc-eQTL 7.63e-01 -0.0278 0.0921 0.481 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -644876 sc-eQTL 6.20e-01 0.0523 0.105 0.48 B_Activated L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.48e-01 0.146 0.1 0.48 B_Activated L2
ENSG00000116641 DOCK7 260149 sc-eQTL 3.75e-01 -0.0834 0.0937 0.48 B_Activated L2
ENSG00000125703 ATG4C 164403 sc-eQTL 7.51e-01 0.0315 0.0988 0.48 B_Activated L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 3.38e-01 0.0926 0.0963 0.48 B_Activated L2
ENSG00000162607 USP1 512238 sc-eQTL 2.25e-01 0.127 0.104 0.48 B_Activated L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 6.09e-01 -0.0468 0.0913 0.48 B_Activated L2
ENSG00000079739 PGM1 -644876 sc-eQTL 2.75e-01 0.0996 0.091 0.481 B_Intermediate L2
ENSG00000088035 ALG6 -419040 sc-eQTL 7.37e-01 0.0312 0.0927 0.481 B_Intermediate L2
ENSG00000116641 DOCK7 260149 sc-eQTL 7.52e-01 -0.028 0.0885 0.481 B_Intermediate L2
ENSG00000125703 ATG4C 164403 sc-eQTL 6.93e-01 -0.0296 0.0749 0.481 B_Intermediate L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 3.57e-01 -0.0823 0.0891 0.481 B_Intermediate L2
ENSG00000162607 USP1 512238 sc-eQTL 1.26e-01 0.136 0.0886 0.481 B_Intermediate L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 7.64e-01 0.0265 0.0884 0.481 B_Intermediate L2
ENSG00000079739 PGM1 -644876 sc-eQTL 6.29e-02 0.167 0.0891 0.483 B_Memory L2
ENSG00000088035 ALG6 -419040 sc-eQTL 6.43e-01 0.0424 0.0913 0.483 B_Memory L2
ENSG00000116641 DOCK7 260149 sc-eQTL 3.18e-01 -0.0855 0.0855 0.483 B_Memory L2
ENSG00000125703 ATG4C 164403 sc-eQTL 3.93e-01 0.0696 0.0813 0.483 B_Memory L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 4.57e-01 -0.0694 0.093 0.483 B_Memory L2
ENSG00000162607 USP1 512238 sc-eQTL 3.66e-02 -0.196 0.093 0.483 B_Memory L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 2.28e-01 0.111 0.0922 0.483 B_Memory L2
ENSG00000079739 PGM1 -644876 sc-eQTL 8.95e-01 0.012 0.091 0.481 B_Naive1 L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.02e-01 -0.149 0.0908 0.481 B_Naive1 L2
ENSG00000116641 DOCK7 260149 sc-eQTL 8.56e-01 -0.0159 0.0875 0.481 B_Naive1 L2
ENSG00000125703 ATG4C 164403 sc-eQTL 9.29e-01 0.00602 0.0674 0.481 B_Naive1 L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 5.62e-01 0.052 0.0894 0.481 B_Naive1 L2
ENSG00000162607 USP1 512238 sc-eQTL 4.02e-01 -0.0659 0.0785 0.481 B_Naive1 L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 5.82e-01 -0.0525 0.0954 0.481 B_Naive1 L2
ENSG00000079739 PGM1 -644876 sc-eQTL 1.26e-01 0.137 0.0893 0.483 B_Naive2 L2
ENSG00000088035 ALG6 -419040 sc-eQTL 3.45e-01 -0.0885 0.0935 0.483 B_Naive2 L2
ENSG00000116641 DOCK7 260149 sc-eQTL 7.53e-01 -0.0284 0.09 0.483 B_Naive2 L2
ENSG00000125703 ATG4C 164403 sc-eQTL 4.89e-01 -0.0601 0.0866 0.483 B_Naive2 L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.61e-01 -0.00464 0.094 0.483 B_Naive2 L2
ENSG00000162607 USP1 512238 sc-eQTL 8.99e-01 -0.0113 0.0895 0.483 B_Naive2 L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 5.89e-01 -0.0506 0.0935 0.483 B_Naive2 L2
ENSG00000079739 PGM1 -644876 sc-eQTL 2.58e-01 -0.105 0.0921 0.484 CD4_CTL L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.87e-02 0.228 0.0963 0.484 CD4_CTL L2
ENSG00000116641 DOCK7 260149 sc-eQTL 6.63e-01 0.0373 0.0853 0.484 CD4_CTL L2
ENSG00000125703 ATG4C 164403 sc-eQTL 4.56e-01 -0.0659 0.0882 0.484 CD4_CTL L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.16e-01 -0.00995 0.0945 0.484 CD4_CTL L2
ENSG00000162607 USP1 512238 sc-eQTL 5.97e-01 0.0476 0.0899 0.484 CD4_CTL L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 9.49e-01 0.0057 0.0898 0.484 CD4_CTL L2
ENSG00000079739 PGM1 -644876 sc-eQTL 2.18e-01 0.0913 0.0739 0.481 CD4_Naive L2
ENSG00000088035 ALG6 -419040 sc-eQTL 5.56e-01 -0.0474 0.0805 0.481 CD4_Naive L2
ENSG00000116641 DOCK7 260149 sc-eQTL 9.89e-01 -0.00105 0.0792 0.481 CD4_Naive L2
ENSG00000125703 ATG4C 164403 sc-eQTL 3.82e-01 0.0612 0.0699 0.481 CD4_Naive L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.61e-01 -0.00415 0.0855 0.481 CD4_Naive L2
ENSG00000162607 USP1 512238 sc-eQTL 9.52e-01 -0.00392 0.0653 0.481 CD4_Naive L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 7.15e-01 -0.0311 0.0849 0.481 CD4_Naive L2
ENSG00000079739 PGM1 -644876 sc-eQTL 5.34e-01 0.048 0.077 0.481 CD4_TCM L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.42e-01 -0.131 0.0891 0.481 CD4_TCM L2
ENSG00000116641 DOCK7 260149 sc-eQTL 9.16e-01 0.00837 0.0793 0.481 CD4_TCM L2
ENSG00000125703 ATG4C 164403 sc-eQTL 8.68e-01 0.0129 0.0773 0.481 CD4_TCM L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.17e-01 0.00945 0.0911 0.481 CD4_TCM L2
ENSG00000162607 USP1 512238 sc-eQTL 5.80e-01 0.0414 0.0746 0.481 CD4_TCM L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 4.38e-01 -0.0684 0.088 0.481 CD4_TCM L2
ENSG00000079739 PGM1 -644876 sc-eQTL 8.34e-02 0.156 0.0897 0.481 CD4_TEM L2
ENSG00000088035 ALG6 -419040 sc-eQTL 6.16e-01 -0.0456 0.0907 0.481 CD4_TEM L2
ENSG00000116641 DOCK7 260149 sc-eQTL 2.06e-01 -0.112 0.0882 0.481 CD4_TEM L2
ENSG00000125703 ATG4C 164403 sc-eQTL 5.74e-01 -0.0483 0.0859 0.481 CD4_TEM L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.08e-01 0.0103 0.0887 0.481 CD4_TEM L2
ENSG00000162607 USP1 512238 sc-eQTL 2.22e-01 0.103 0.0838 0.481 CD4_TEM L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 8.96e-01 0.012 0.0919 0.481 CD4_TEM L2
ENSG00000079739 PGM1 -644876 sc-eQTL 1.98e-01 -0.107 0.0825 0.481 CD8_CTL L2
ENSG00000088035 ALG6 -419040 sc-eQTL 2.88e-01 0.0936 0.0878 0.481 CD8_CTL L2
ENSG00000116641 DOCK7 260149 sc-eQTL 4.40e-01 0.0646 0.0835 0.481 CD8_CTL L2
ENSG00000125703 ATG4C 164403 sc-eQTL 3.66e-01 0.0805 0.0888 0.481 CD8_CTL L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 5.54e-01 0.0548 0.0924 0.481 CD8_CTL L2
ENSG00000162607 USP1 512238 sc-eQTL 3.58e-01 0.0762 0.0827 0.481 CD8_CTL L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 5.00e-01 -0.0639 0.0946 0.481 CD8_CTL L2
ENSG00000079739 PGM1 -644876 sc-eQTL 7.61e-01 -0.0259 0.0849 0.481 CD8_Naive L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.97e-01 -0.113 0.0875 0.481 CD8_Naive L2
ENSG00000116641 DOCK7 260149 sc-eQTL 4.36e-02 0.183 0.09 0.481 CD8_Naive L2
ENSG00000125703 ATG4C 164403 sc-eQTL 8.60e-01 -0.0154 0.0872 0.481 CD8_Naive L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 5.79e-01 0.049 0.0882 0.481 CD8_Naive L2
ENSG00000162607 USP1 512238 sc-eQTL 1.30e-01 0.113 0.0742 0.481 CD8_Naive L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 6.14e-01 -0.042 0.0832 0.481 CD8_Naive L2
ENSG00000079739 PGM1 -644876 sc-eQTL 5.55e-01 -0.0557 0.0942 0.493 CD8_TCM L2
ENSG00000088035 ALG6 -419040 sc-eQTL 8.56e-01 -0.0173 0.0954 0.493 CD8_TCM L2
ENSG00000116641 DOCK7 260149 sc-eQTL 6.14e-01 -0.047 0.0931 0.493 CD8_TCM L2
ENSG00000125703 ATG4C 164403 sc-eQTL 4.82e-02 -0.188 0.0943 0.493 CD8_TCM L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 1.51e-01 -0.133 0.0921 0.493 CD8_TCM L2
ENSG00000162607 USP1 512238 sc-eQTL 6.75e-01 -0.0374 0.0891 0.493 CD8_TCM L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 7.59e-01 -0.029 0.0943 0.493 CD8_TCM L2
ENSG00000079739 PGM1 -644876 sc-eQTL 4.56e-01 0.0701 0.0939 0.479 CD8_TEM L2
ENSG00000088035 ALG6 -419040 sc-eQTL 9.44e-01 0.00667 0.0944 0.479 CD8_TEM L2
ENSG00000116641 DOCK7 260149 sc-eQTL 1.70e-01 0.125 0.091 0.479 CD8_TEM L2
ENSG00000125703 ATG4C 164403 sc-eQTL 8.47e-01 0.0169 0.0879 0.479 CD8_TEM L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 2.12e-01 -0.119 0.0948 0.479 CD8_TEM L2
ENSG00000162607 USP1 512238 sc-eQTL 8.63e-02 0.155 0.0901 0.479 CD8_TEM L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 1.54e-01 -0.132 0.0918 0.479 CD8_TEM L2
ENSG00000079739 PGM1 -644876 sc-eQTL 4.02e-01 -0.0741 0.0883 0.476 MAIT L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.00e-01 0.144 0.087 0.476 MAIT L2
ENSG00000116641 DOCK7 260149 sc-eQTL 4.32e-01 0.066 0.0838 0.476 MAIT L2
ENSG00000125703 ATG4C 164403 sc-eQTL 9.02e-01 -0.0109 0.0885 0.476 MAIT L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 1.21e-01 0.137 0.0881 0.476 MAIT L2
ENSG00000162607 USP1 512238 sc-eQTL 7.50e-01 0.0281 0.0879 0.476 MAIT L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 8.22e-01 0.0205 0.0913 0.476 MAIT L2
ENSG00000079739 PGM1 -644876 sc-eQTL 8.34e-01 0.0183 0.0875 0.48 NK_CD56bright L2
ENSG00000088035 ALG6 -419040 sc-eQTL 3.24e-01 0.0884 0.0895 0.48 NK_CD56bright L2
ENSG00000116641 DOCK7 260149 sc-eQTL 9.01e-01 -0.00971 0.0777 0.48 NK_CD56bright L2
ENSG00000125703 ATG4C 164403 sc-eQTL 4.84e-01 0.0608 0.0867 0.48 NK_CD56bright L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 1.65e-01 -0.125 0.09 0.48 NK_CD56bright L2
ENSG00000162607 USP1 512238 sc-eQTL 5.46e-01 -0.0564 0.0931 0.48 NK_CD56bright L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 8.05e-01 0.0221 0.0892 0.48 NK_CD56bright L2
ENSG00000079739 PGM1 -644876 sc-eQTL 3.35e-01 -0.0667 0.069 0.481 NK_CD56dim L2
ENSG00000088035 ALG6 -419040 sc-eQTL 3.70e-01 0.0787 0.0876 0.481 NK_CD56dim L2
ENSG00000116641 DOCK7 260149 sc-eQTL 1.99e-01 0.0979 0.076 0.481 NK_CD56dim L2
ENSG00000125703 ATG4C 164403 sc-eQTL 6.32e-01 -0.0371 0.0775 0.481 NK_CD56dim L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 2.13e-01 0.11 0.0879 0.481 NK_CD56dim L2
ENSG00000162607 USP1 512238 sc-eQTL 9.88e-01 0.00126 0.0856 0.481 NK_CD56dim L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 1.73e-01 -0.13 0.0949 0.481 NK_CD56dim L2
ENSG00000079739 PGM1 -644876 sc-eQTL 6.88e-01 -0.0375 0.0934 0.473 NK_HLA L2
ENSG00000088035 ALG6 -419040 sc-eQTL 8.91e-02 0.164 0.0962 0.473 NK_HLA L2
ENSG00000116641 DOCK7 260149 sc-eQTL 8.26e-01 -0.0163 0.0741 0.473 NK_HLA L2
ENSG00000125703 ATG4C 164403 sc-eQTL 2.90e-01 -0.0912 0.0859 0.473 NK_HLA L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 3.29e-01 0.0884 0.0903 0.473 NK_HLA L2
ENSG00000162607 USP1 512238 sc-eQTL 5.16e-01 -0.0615 0.0946 0.473 NK_HLA L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 2.27e-01 -0.104 0.0858 0.473 NK_HLA L2
ENSG00000079739 PGM1 -644876 sc-eQTL 9.04e-01 -0.00922 0.076 0.481 NK_cytokine L2
ENSG00000088035 ALG6 -419040 sc-eQTL 2.23e-01 0.105 0.0856 0.481 NK_cytokine L2
ENSG00000116641 DOCK7 260149 sc-eQTL 4.08e-01 -0.0659 0.0795 0.481 NK_cytokine L2
ENSG00000125703 ATG4C 164403 sc-eQTL 5.17e-01 -0.0528 0.0814 0.481 NK_cytokine L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 2.94e-01 0.0886 0.0841 0.481 NK_cytokine L2
ENSG00000162607 USP1 512238 sc-eQTL 8.60e-01 0.0157 0.0887 0.481 NK_cytokine L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 9.67e-01 -0.00377 0.0899 0.481 NK_cytokine L2
ENSG00000079739 PGM1 -644876 sc-eQTL 6.57e-01 -0.0464 0.104 0.463 PB L2
ENSG00000088035 ALG6 -419040 sc-eQTL 8.20e-02 0.19 0.108 0.463 PB L2
ENSG00000116641 DOCK7 260149 sc-eQTL 6.75e-01 -0.0493 0.117 0.463 PB L2
ENSG00000125703 ATG4C 164403 sc-eQTL 7.69e-01 0.03 0.102 0.463 PB L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.95e-01 -0.000663 0.102 0.463 PB L2
ENSG00000162607 USP1 512238 sc-eQTL 2.42e-01 -0.119 0.101 0.463 PB L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 5.03e-01 0.0751 0.112 0.463 PB L2
ENSG00000079739 PGM1 -644876 sc-eQTL 1.14e-01 0.13 0.0817 0.483 Pro_T L2
ENSG00000088035 ALG6 -419040 sc-eQTL 3.76e-01 0.074 0.0835 0.483 Pro_T L2
ENSG00000116641 DOCK7 260149 sc-eQTL 7.04e-01 -0.0319 0.0839 0.483 Pro_T L2
ENSG00000125703 ATG4C 164403 sc-eQTL 7.20e-01 -0.0264 0.0735 0.483 Pro_T L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 8.71e-01 0.012 0.0737 0.483 Pro_T L2
ENSG00000162607 USP1 512238 sc-eQTL 4.15e-01 0.0413 0.0506 0.483 Pro_T L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 4.05e-01 -0.0713 0.0855 0.483 Pro_T L2
ENSG00000079739 PGM1 -644876 sc-eQTL 1.35e-01 0.134 0.0894 0.481 Treg L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.79e-01 -0.129 0.0957 0.481 Treg L2
ENSG00000116641 DOCK7 260149 sc-eQTL 4.28e-01 0.07 0.0881 0.481 Treg L2
ENSG00000125703 ATG4C 164403 sc-eQTL 7.00e-01 0.0347 0.0902 0.481 Treg L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 7.67e-01 0.028 0.0943 0.481 Treg L2
ENSG00000162607 USP1 512238 sc-eQTL 6.26e-01 0.0445 0.0912 0.481 Treg L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 3.37e-02 -0.191 0.0893 0.481 Treg L2
ENSG00000079739 PGM1 -644876 sc-eQTL 1.73e-01 0.119 0.0871 0.478 cDC L2
ENSG00000088035 ALG6 -419040 sc-eQTL 3.59e-01 0.0815 0.0885 0.478 cDC L2
ENSG00000116641 DOCK7 260149 sc-eQTL 5.64e-02 0.166 0.0862 0.478 cDC L2
ENSG00000125703 ATG4C 164403 sc-eQTL 7.73e-02 0.133 0.075 0.478 cDC L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 3.73e-01 0.0854 0.0956 0.478 cDC L2
ENSG00000162607 USP1 512238 sc-eQTL 7.20e-01 -0.0307 0.0853 0.478 cDC L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 8.44e-01 0.0152 0.077 0.478 cDC L2
ENSG00000079739 PGM1 -644876 sc-eQTL 2.12e-01 0.103 0.0819 0.481 cMono_IL1B L2
ENSG00000088035 ALG6 -419040 sc-eQTL 2.48e-01 -0.0951 0.082 0.481 cMono_IL1B L2
ENSG00000116641 DOCK7 260149 sc-eQTL 3.11e-01 0.0879 0.0866 0.481 cMono_IL1B L2
ENSG00000125703 ATG4C 164403 sc-eQTL 3.62e-01 -0.0557 0.0609 0.481 cMono_IL1B L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 3.22e-01 -0.0855 0.0862 0.481 cMono_IL1B L2
ENSG00000162607 USP1 512238 sc-eQTL 7.13e-01 -0.0281 0.0762 0.481 cMono_IL1B L2
ENSG00000240563 L1TD1 753686 sc-eQTL 5.02e-01 0.0514 0.0765 0.481 cMono_IL1B L2
ENSG00000079739 PGM1 -644876 sc-eQTL 6.48e-02 0.168 0.0902 0.481 cMono_S100A L2
ENSG00000088035 ALG6 -419040 sc-eQTL 5.19e-01 -0.0595 0.0921 0.481 cMono_S100A L2
ENSG00000116641 DOCK7 260149 sc-eQTL 3.53e-01 -0.0794 0.0853 0.481 cMono_S100A L2
ENSG00000125703 ATG4C 164403 sc-eQTL 5.42e-01 0.0452 0.074 0.481 cMono_S100A L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 8.01e-01 -0.0211 0.0835 0.481 cMono_S100A L2
ENSG00000162607 USP1 512238 sc-eQTL 6.37e-01 -0.0406 0.0859 0.481 cMono_S100A L2
ENSG00000240563 L1TD1 753686 sc-eQTL 1.48e-01 -0.103 0.0712 0.481 cMono_S100A L2
ENSG00000079739 PGM1 -644876 sc-eQTL 7.07e-01 0.0409 0.108 0.476 gdT L2
ENSG00000088035 ALG6 -419040 sc-eQTL 1.78e-01 -0.156 0.115 0.476 gdT L2
ENSG00000116641 DOCK7 260149 sc-eQTL 1.03e-01 0.185 0.112 0.476 gdT L2
ENSG00000125703 ATG4C 164403 sc-eQTL 7.01e-01 -0.0417 0.108 0.476 gdT L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.62e-01 0.00543 0.115 0.476 gdT L2
ENSG00000162607 USP1 512238 sc-eQTL 9.80e-01 -0.00271 0.109 0.476 gdT L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 2.96e-01 -0.118 0.113 0.476 gdT L2
ENSG00000079739 PGM1 -644876 sc-eQTL 5.57e-01 0.0543 0.0922 0.482 intMono L2
ENSG00000088035 ALG6 -419040 sc-eQTL 8.79e-01 0.0131 0.086 0.482 intMono L2
ENSG00000116641 DOCK7 260149 sc-eQTL 1.85e-01 0.116 0.0874 0.482 intMono L2
ENSG00000125703 ATG4C 164403 sc-eQTL 5.79e-01 0.0465 0.0838 0.482 intMono L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 1.37e-01 -0.137 0.0918 0.482 intMono L2
ENSG00000162607 USP1 512238 sc-eQTL 1.60e-01 -0.132 0.0935 0.482 intMono L2
ENSG00000240563 L1TD1 753686 sc-eQTL 8.04e-01 -0.0172 0.0691 0.482 intMono L2
ENSG00000079739 PGM1 -644876 sc-eQTL 9.55e-01 -0.00464 0.0827 0.471 ncMono L2
ENSG00000088035 ALG6 -419040 sc-eQTL 2.60e-01 0.102 0.0906 0.471 ncMono L2
ENSG00000116641 DOCK7 260149 sc-eQTL 8.06e-01 0.022 0.0894 0.471 ncMono L2
ENSG00000125703 ATG4C 164403 sc-eQTL 9.53e-01 -0.0049 0.0836 0.471 ncMono L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 7.21e-01 -0.0312 0.0874 0.471 ncMono L2
ENSG00000162607 USP1 512238 sc-eQTL 1.79e-01 -0.12 0.0889 0.471 ncMono L2
ENSG00000240563 L1TD1 753686 sc-eQTL 8.85e-01 -0.00915 0.0633 0.471 ncMono L2
ENSG00000079739 PGM1 -644876 sc-eQTL 4.29e-01 0.0817 0.103 0.48 pDC L2
ENSG00000088035 ALG6 -419040 sc-eQTL 6.94e-01 -0.0397 0.1 0.48 pDC L2
ENSG00000116641 DOCK7 260149 sc-eQTL 4.36e-01 0.08 0.102 0.48 pDC L2
ENSG00000125703 ATG4C 164403 sc-eQTL 2.94e-01 0.0967 0.0918 0.48 pDC L2
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.35e-01 -0.00851 0.103 0.48 pDC L2
ENSG00000162607 USP1 512238 sc-eQTL 8.35e-01 0.022 0.105 0.48 pDC L2
ENSG00000203965 EFCAB7 -574837 sc-eQTL 1.90e-01 0.12 0.091 0.48 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -644876 sc-eQTL 1.17e-01 0.132 0.0839 0.481 B_Memory LOneK1K
ENSG00000088035 ALG6 -419040 sc-eQTL 2.25e-01 0.113 0.093 0.481 B_Memory LOneK1K
ENSG00000116641 DOCK7 260149 sc-eQTL 1.47e-01 -0.117 0.0806 0.481 B_Memory LOneK1K
ENSG00000125703 ATG4C 164403 sc-eQTL 7.75e-01 0.0187 0.0655 0.481 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -645186 sc-eQTL 2.88e-01 -0.0914 0.0858 0.481 B_Memory LOneK1K
ENSG00000162607 USP1 512238 sc-eQTL 6.45e-01 -0.0385 0.0835 0.481 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -574837 sc-eQTL 4.26e-01 0.0715 0.0896 0.481 B_Memory LOneK1K
ENSG00000079739 PGM1 -644876 sc-eQTL 3.69e-01 0.0798 0.0886 0.481 B_Naive LOneK1K
ENSG00000088035 ALG6 -419040 sc-eQTL 7.36e-02 -0.163 0.0907 0.481 B_Naive LOneK1K
ENSG00000116641 DOCK7 260149 sc-eQTL 9.64e-01 -0.00388 0.0854 0.481 B_Naive LOneK1K
ENSG00000125703 ATG4C 164403 sc-eQTL 5.90e-01 -0.0352 0.0651 0.481 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -645186 sc-eQTL 4.14e-01 0.0752 0.092 0.481 B_Naive LOneK1K
ENSG00000162607 USP1 512238 sc-eQTL 1.40e-01 -0.117 0.0787 0.481 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -574837 sc-eQTL 2.85e-01 -0.099 0.0923 0.481 B_Naive LOneK1K
ENSG00000079739 PGM1 -644876 sc-eQTL 4.93e-02 0.165 0.0836 0.481 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -419040 sc-eQTL 3.39e-01 -0.0782 0.0816 0.481 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 260149 sc-eQTL 4.33e-01 0.0646 0.0822 0.481 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 164403 sc-eQTL 6.75e-01 -0.0239 0.0569 0.481 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -645186 sc-eQTL 4.07e-01 -0.0699 0.0841 0.481 CD14_Mono LOneK1K
ENSG00000162607 USP1 512238 sc-eQTL 9.85e-01 0.00137 0.0719 0.481 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 753686 sc-eQTL 8.70e-01 0.0128 0.078 0.481 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -644876 sc-eQTL 4.29e-01 -0.0626 0.079 0.483 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -419040 sc-eQTL 2.34e-01 0.107 0.0896 0.483 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 260149 sc-eQTL 1.06e-01 0.143 0.0883 0.483 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 164403 sc-eQTL 9.74e-01 0.00248 0.0758 0.483 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -645186 sc-eQTL 9.59e-02 -0.146 0.0874 0.483 CD16_Mono LOneK1K
ENSG00000162607 USP1 512238 sc-eQTL 1.35e-01 -0.123 0.0822 0.483 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 753686 sc-eQTL 5.96e-01 0.03 0.0564 0.483 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -644876 sc-eQTL 5.64e-01 -0.0393 0.0679 0.481 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -419040 sc-eQTL 7.20e-02 0.146 0.081 0.481 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 260149 sc-eQTL 8.71e-01 -0.0119 0.0731 0.481 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 164403 sc-eQTL 2.89e-01 -0.0774 0.0728 0.481 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -645186 sc-eQTL 1.25e-01 0.133 0.086 0.481 NK_CD56dim LOneK1K
ENSG00000162607 USP1 512238 sc-eQTL 6.86e-01 -0.0317 0.0785 0.481 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -574837 sc-eQTL 1.19e-01 -0.149 0.095 0.481 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000125703 ATG4C 164403 eQTL 0.0151 0.041 0.0168 0.0 0.0 0.435
ENSG00000132855 ANGPTL3 351048 pQTL 0.0339 0.0609 0.0287 0.0 0.0 0.444
ENSG00000162607 USP1 512238 eQTL 0.0204 0.03 0.0129 0.0 0.0 0.435

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 \N -644876 2.95e-07 1.7e-07 6.28e-08 2.41e-07 9.8e-08 8.33e-08 2.24e-07 5.82e-08 1.71e-07 9.72e-08 1.76e-07 1.31e-07 2.29e-07 8.07e-08 5.43e-08 8.08e-08 4.45e-08 1.8e-07 7.18e-08 5.35e-08 1.22e-07 1.47e-07 1.68e-07 4.27e-08 2.17e-07 1.31e-07 1.2e-07 1.12e-07 1.31e-07 1.29e-07 1.22e-07 4.43e-08 3.21e-08 9.08e-08 4.04e-08 2.79e-08 4.54e-08 8.17e-08 5.84e-08 6.92e-08 4.92e-08 1.59e-07 3.55e-08 7.35e-09 3.87e-08 8.31e-09 7.92e-08 0.0 4.83e-08
ENSG00000203965 \N -574837 3.27e-07 2.5e-07 6.41e-08 2.66e-07 1.01e-07 8.85e-08 2.95e-07 6.75e-08 2.01e-07 1.21e-07 2.47e-07 1.72e-07 3.18e-07 8.54e-08 6.6e-08 9.35e-08 6.63e-08 2.43e-07 7.42e-08 7.05e-08 1.27e-07 1.9e-07 1.89e-07 5.6e-08 2.99e-07 1.56e-07 1.33e-07 1.42e-07 1.4e-07 1.89e-07 1.59e-07 6.58e-08 3.8e-08 9.81e-08 8.75e-08 3.57e-08 6.2e-08 6.32e-08 4.99e-08 7.77e-08 4.46e-08 1.64e-07 3.4e-08 1.71e-08 5.32e-08 1.03e-08 9.07e-08 2.89e-09 4.68e-08