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Genes within 1Mb (chr1:62944499:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -648912 sc-eQTL 7.89e-01 0.0207 0.0773 0.348 B L1
ENSG00000088035 ALG6 -423076 sc-eQTL 4.86e-01 -0.0559 0.08 0.348 B L1
ENSG00000116641 DOCK7 256113 sc-eQTL 1.92e-01 -0.104 0.0798 0.348 B L1
ENSG00000125703 ATG4C 160367 sc-eQTL 8.94e-01 0.00741 0.0557 0.348 B L1
ENSG00000142856 ITGB3BP -649222 sc-eQTL 6.68e-01 -0.0381 0.0886 0.348 B L1
ENSG00000162607 USP1 508202 sc-eQTL 1.72e-02 0.182 0.0759 0.348 B L1
ENSG00000203965 EFCAB7 -578873 sc-eQTL 8.42e-01 -0.0181 0.0908 0.348 B L1
ENSG00000079739 PGM1 -648912 sc-eQTL 4.88e-01 -0.0466 0.0671 0.348 CD4T L1
ENSG00000088035 ALG6 -423076 sc-eQTL 6.71e-01 -0.0315 0.0741 0.348 CD4T L1
ENSG00000116641 DOCK7 256113 sc-eQTL 6.70e-01 -0.032 0.075 0.348 CD4T L1
ENSG00000125703 ATG4C 160367 sc-eQTL 8.23e-01 -0.0136 0.0606 0.348 CD4T L1
ENSG00000142856 ITGB3BP -649222 sc-eQTL 6.96e-01 0.0336 0.0859 0.348 CD4T L1
ENSG00000162607 USP1 508202 sc-eQTL 8.48e-01 -0.0113 0.0588 0.348 CD4T L1
ENSG00000203965 EFCAB7 -578873 sc-eQTL 9.22e-01 -0.00755 0.0772 0.348 CD4T L1
ENSG00000079739 PGM1 -648912 sc-eQTL 7.71e-02 0.131 0.0738 0.348 CD8T L1
ENSG00000088035 ALG6 -423076 sc-eQTL 5.82e-01 0.0451 0.0818 0.348 CD8T L1
ENSG00000116641 DOCK7 256113 sc-eQTL 1.72e-01 -0.113 0.0826 0.348 CD8T L1
ENSG00000125703 ATG4C 160367 sc-eQTL 9.93e-01 0.000677 0.0788 0.348 CD8T L1
ENSG00000142856 ITGB3BP -649222 sc-eQTL 1.78e-01 -0.119 0.0878 0.348 CD8T L1
ENSG00000162607 USP1 508202 sc-eQTL 3.19e-01 -0.0684 0.0685 0.348 CD8T L1
ENSG00000203965 EFCAB7 -578873 sc-eQTL 1.23e-01 0.135 0.0874 0.348 CD8T L1
ENSG00000079739 PGM1 -648912 sc-eQTL 2.48e-02 -0.182 0.0805 0.349 DC L1
ENSG00000088035 ALG6 -423076 sc-eQTL 2.81e-01 -0.0907 0.0839 0.349 DC L1
ENSG00000116641 DOCK7 256113 sc-eQTL 1.35e-01 -0.129 0.0857 0.349 DC L1
ENSG00000125703 ATG4C 160367 sc-eQTL 1.90e-02 -0.157 0.0665 0.349 DC L1
ENSG00000142856 ITGB3BP -649222 sc-eQTL 1.82e-01 -0.126 0.0939 0.349 DC L1
ENSG00000162607 USP1 508202 sc-eQTL 5.07e-01 0.0547 0.0822 0.349 DC L1
ENSG00000203965 EFCAB7 -578873 sc-eQTL 1.41e-03 -0.259 0.08 0.349 DC L1
ENSG00000079739 PGM1 -648912 sc-eQTL 3.99e-01 -0.0684 0.0809 0.348 Mono L1
ENSG00000088035 ALG6 -423076 sc-eQTL 8.84e-01 0.0123 0.0846 0.348 Mono L1
ENSG00000116641 DOCK7 256113 sc-eQTL 1.66e-01 -0.113 0.0814 0.348 Mono L1
ENSG00000125703 ATG4C 160367 sc-eQTL 3.27e-01 0.0542 0.0552 0.348 Mono L1
ENSG00000142856 ITGB3BP -649222 sc-eQTL 4.00e-01 0.0736 0.0872 0.348 Mono L1
ENSG00000162607 USP1 508202 sc-eQTL 7.59e-01 0.0221 0.0718 0.348 Mono L1
ENSG00000240563 L1TD1 749650 sc-eQTL 2.72e-01 -0.0735 0.0668 0.348 Mono L1
ENSG00000079739 PGM1 -648912 sc-eQTL 4.56e-01 0.0504 0.0675 0.35 NK L1
ENSG00000088035 ALG6 -423076 sc-eQTL 1.20e-01 -0.123 0.0789 0.35 NK L1
ENSG00000116641 DOCK7 256113 sc-eQTL 4.45e-01 -0.0499 0.0652 0.35 NK L1
ENSG00000125703 ATG4C 160367 sc-eQTL 2.95e-01 0.0735 0.07 0.35 NK L1
ENSG00000142856 ITGB3BP -649222 sc-eQTL 1.38e-01 -0.129 0.0867 0.35 NK L1
ENSG00000162607 USP1 508202 sc-eQTL 9.70e-01 0.00297 0.0779 0.35 NK L1
ENSG00000203965 EFCAB7 -578873 sc-eQTL 1.89e-02 0.221 0.0934 0.35 NK L1
ENSG00000079739 PGM1 -648912 sc-eQTL 5.69e-01 0.0436 0.0765 0.348 Other_T L1
ENSG00000088035 ALG6 -423076 sc-eQTL 1.77e-01 0.104 0.0765 0.348 Other_T L1
ENSG00000116641 DOCK7 256113 sc-eQTL 1.75e-01 -0.106 0.0781 0.348 Other_T L1
ENSG00000125703 ATG4C 160367 sc-eQTL 5.70e-01 -0.0386 0.0679 0.348 Other_T L1
ENSG00000142856 ITGB3BP -649222 sc-eQTL 3.16e-02 -0.129 0.0596 0.348 Other_T L1
ENSG00000162607 USP1 508202 sc-eQTL 2.04e-01 0.0662 0.052 0.348 Other_T L1
ENSG00000203965 EFCAB7 -578873 sc-eQTL 5.69e-01 0.053 0.0929 0.348 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -648912 sc-eQTL 9.06e-01 -0.0125 0.105 0.357 B_Activated L2
ENSG00000088035 ALG6 -423076 sc-eQTL 2.09e-01 -0.127 0.101 0.357 B_Activated L2
ENSG00000116641 DOCK7 256113 sc-eQTL 9.05e-01 -0.0112 0.0941 0.357 B_Activated L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.69e-01 0.029 0.0989 0.357 B_Activated L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 8.59e-02 -0.166 0.0958 0.357 B_Activated L2
ENSG00000162607 USP1 508202 sc-eQTL 2.77e-01 -0.114 0.104 0.357 B_Activated L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 7.98e-01 -0.0234 0.0915 0.357 B_Activated L2
ENSG00000079739 PGM1 -648912 sc-eQTL 4.96e-01 0.0635 0.0931 0.348 B_Intermediate L2
ENSG00000088035 ALG6 -423076 sc-eQTL 5.06e-01 0.063 0.0945 0.348 B_Intermediate L2
ENSG00000116641 DOCK7 256113 sc-eQTL 5.54e-01 0.0535 0.0903 0.348 B_Intermediate L2
ENSG00000125703 ATG4C 160367 sc-eQTL 6.16e-01 0.0384 0.0765 0.348 B_Intermediate L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 3.97e-01 -0.0773 0.091 0.348 B_Intermediate L2
ENSG00000162607 USP1 508202 sc-eQTL 6.40e-02 -0.168 0.0903 0.348 B_Intermediate L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 8.10e-01 0.0217 0.0903 0.348 B_Intermediate L2
ENSG00000079739 PGM1 -648912 sc-eQTL 3.24e-01 -0.0894 0.0905 0.347 B_Memory L2
ENSG00000088035 ALG6 -423076 sc-eQTL 6.26e-02 -0.171 0.0914 0.347 B_Memory L2
ENSG00000116641 DOCK7 256113 sc-eQTL 8.32e-01 -0.0184 0.0864 0.347 B_Memory L2
ENSG00000125703 ATG4C 160367 sc-eQTL 3.30e-01 -0.08 0.082 0.347 B_Memory L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 9.30e-02 0.158 0.0934 0.347 B_Memory L2
ENSG00000162607 USP1 508202 sc-eQTL 1.13e-02 0.239 0.0934 0.347 B_Memory L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 1.19e-01 -0.145 0.0928 0.347 B_Memory L2
ENSG00000079739 PGM1 -648912 sc-eQTL 6.20e-01 -0.0463 0.0932 0.348 B_Naive1 L2
ENSG00000088035 ALG6 -423076 sc-eQTL 7.90e-02 0.164 0.0929 0.348 B_Naive1 L2
ENSG00000116641 DOCK7 256113 sc-eQTL 7.19e-01 -0.0323 0.0897 0.348 B_Naive1 L2
ENSG00000125703 ATG4C 160367 sc-eQTL 6.45e-01 -0.0319 0.0691 0.348 B_Naive1 L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 7.06e-01 0.0346 0.0916 0.348 B_Naive1 L2
ENSG00000162607 USP1 508202 sc-eQTL 9.68e-01 0.00329 0.0806 0.348 B_Naive1 L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 4.73e-01 0.0702 0.0977 0.348 B_Naive1 L2
ENSG00000079739 PGM1 -648912 sc-eQTL 4.55e-01 -0.0686 0.0917 0.345 B_Naive2 L2
ENSG00000088035 ALG6 -423076 sc-eQTL 2.69e-01 -0.106 0.0955 0.345 B_Naive2 L2
ENSG00000116641 DOCK7 256113 sc-eQTL 1.46e-01 -0.134 0.0916 0.345 B_Naive2 L2
ENSG00000125703 ATG4C 160367 sc-eQTL 6.09e-01 0.0453 0.0886 0.345 B_Naive2 L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 5.20e-01 0.0619 0.096 0.345 B_Naive2 L2
ENSG00000162607 USP1 508202 sc-eQTL 2.64e-01 0.102 0.0912 0.345 B_Naive2 L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 7.84e-01 -0.0263 0.0956 0.345 B_Naive2 L2
ENSG00000079739 PGM1 -648912 sc-eQTL 1.85e-01 0.122 0.0919 0.35 CD4_CTL L2
ENSG00000088035 ALG6 -423076 sc-eQTL 4.44e-02 -0.195 0.0966 0.35 CD4_CTL L2
ENSG00000116641 DOCK7 256113 sc-eQTL 3.37e-01 -0.0819 0.0851 0.35 CD4_CTL L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.50e-01 0.0282 0.0882 0.35 CD4_CTL L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 4.03e-01 0.0789 0.0942 0.35 CD4_CTL L2
ENSG00000162607 USP1 508202 sc-eQTL 9.13e-01 -0.00979 0.0898 0.35 CD4_CTL L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 4.56e-01 -0.0669 0.0896 0.35 CD4_CTL L2
ENSG00000079739 PGM1 -648912 sc-eQTL 7.60e-01 -0.0231 0.0757 0.348 CD4_Naive L2
ENSG00000088035 ALG6 -423076 sc-eQTL 9.07e-01 -0.00966 0.0822 0.348 CD4_Naive L2
ENSG00000116641 DOCK7 256113 sc-eQTL 6.20e-01 -0.0401 0.0808 0.348 CD4_Naive L2
ENSG00000125703 ATG4C 160367 sc-eQTL 8.26e-01 -0.0158 0.0714 0.348 CD4_Naive L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 4.33e-01 0.0684 0.0872 0.348 CD4_Naive L2
ENSG00000162607 USP1 508202 sc-eQTL 9.50e-01 0.00419 0.0667 0.348 CD4_Naive L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 5.36e-01 -0.0537 0.0866 0.348 CD4_Naive L2
ENSG00000079739 PGM1 -648912 sc-eQTL 8.99e-01 0.00999 0.0786 0.348 CD4_TCM L2
ENSG00000088035 ALG6 -423076 sc-eQTL 9.82e-01 -0.00203 0.0912 0.348 CD4_TCM L2
ENSG00000116641 DOCK7 256113 sc-eQTL 7.19e-01 -0.0291 0.0808 0.348 CD4_TCM L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.51e-01 0.025 0.0787 0.348 CD4_TCM L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 9.52e-01 0.00561 0.0928 0.348 CD4_TCM L2
ENSG00000162607 USP1 508202 sc-eQTL 8.05e-01 -0.0188 0.0761 0.348 CD4_TCM L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 3.48e-01 0.0842 0.0896 0.348 CD4_TCM L2
ENSG00000079739 PGM1 -648912 sc-eQTL 1.28e-01 -0.14 0.0915 0.348 CD4_TEM L2
ENSG00000088035 ALG6 -423076 sc-eQTL 9.68e-01 -0.00374 0.0925 0.348 CD4_TEM L2
ENSG00000116641 DOCK7 256113 sc-eQTL 4.27e-01 0.0716 0.09 0.348 CD4_TEM L2
ENSG00000125703 ATG4C 160367 sc-eQTL 6.93e-01 -0.0347 0.0876 0.348 CD4_TEM L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 9.45e-01 -0.00628 0.0904 0.348 CD4_TEM L2
ENSG00000162607 USP1 508202 sc-eQTL 1.39e-01 -0.127 0.0852 0.348 CD4_TEM L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 2.61e-01 -0.105 0.0934 0.348 CD4_TEM L2
ENSG00000079739 PGM1 -648912 sc-eQTL 5.01e-02 0.163 0.0826 0.348 CD8_CTL L2
ENSG00000088035 ALG6 -423076 sc-eQTL 4.12e-01 -0.0728 0.0885 0.348 CD8_CTL L2
ENSG00000116641 DOCK7 256113 sc-eQTL 4.57e-01 -0.0627 0.084 0.348 CD8_CTL L2
ENSG00000125703 ATG4C 160367 sc-eQTL 9.33e-01 0.00755 0.0896 0.348 CD8_CTL L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 7.25e-01 -0.0327 0.0931 0.348 CD8_CTL L2
ENSG00000162607 USP1 508202 sc-eQTL 3.96e-01 -0.0708 0.0833 0.348 CD8_CTL L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 7.79e-01 0.0268 0.0954 0.348 CD8_CTL L2
ENSG00000079739 PGM1 -648912 sc-eQTL 1.31e-01 0.13 0.0857 0.348 CD8_Naive L2
ENSG00000088035 ALG6 -423076 sc-eQTL 1.94e-01 0.116 0.0889 0.348 CD8_Naive L2
ENSG00000116641 DOCK7 256113 sc-eQTL 5.04e-02 -0.18 0.0914 0.348 CD8_Naive L2
ENSG00000125703 ATG4C 160367 sc-eQTL 9.70e-01 -0.00332 0.0885 0.348 CD8_Naive L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 1.53e-01 -0.128 0.0892 0.348 CD8_Naive L2
ENSG00000162607 USP1 508202 sc-eQTL 3.46e-01 -0.0715 0.0756 0.348 CD8_Naive L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 3.76e-01 0.0748 0.0844 0.348 CD8_Naive L2
ENSG00000079739 PGM1 -648912 sc-eQTL 7.92e-01 0.0253 0.0956 0.343 CD8_TCM L2
ENSG00000088035 ALG6 -423076 sc-eQTL 2.85e-01 -0.104 0.0965 0.343 CD8_TCM L2
ENSG00000116641 DOCK7 256113 sc-eQTL 5.32e-01 0.0592 0.0944 0.343 CD8_TCM L2
ENSG00000125703 ATG4C 160367 sc-eQTL 2.93e-01 0.102 0.0964 0.343 CD8_TCM L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 5.64e-01 0.0542 0.0938 0.343 CD8_TCM L2
ENSG00000162607 USP1 508202 sc-eQTL 2.08e-01 0.114 0.09 0.343 CD8_TCM L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 1.70e-01 0.131 0.0953 0.343 CD8_TCM L2
ENSG00000079739 PGM1 -648912 sc-eQTL 4.03e-01 0.0783 0.0934 0.34 CD8_TEM L2
ENSG00000088035 ALG6 -423076 sc-eQTL 8.99e-01 -0.0119 0.0939 0.34 CD8_TEM L2
ENSG00000116641 DOCK7 256113 sc-eQTL 4.38e-01 -0.0707 0.0909 0.34 CD8_TEM L2
ENSG00000125703 ATG4C 160367 sc-eQTL 3.52e-01 -0.0814 0.0874 0.34 CD8_TEM L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 9.40e-02 0.158 0.0941 0.34 CD8_TEM L2
ENSG00000162607 USP1 508202 sc-eQTL 7.69e-02 -0.16 0.0897 0.34 CD8_TEM L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 7.86e-02 0.161 0.0912 0.34 CD8_TEM L2
ENSG00000079739 PGM1 -648912 sc-eQTL 1.24e-01 0.136 0.0883 0.353 MAIT L2
ENSG00000088035 ALG6 -423076 sc-eQTL 2.75e-01 -0.0959 0.0876 0.353 MAIT L2
ENSG00000116641 DOCK7 256113 sc-eQTL 3.40e-01 -0.0804 0.084 0.353 MAIT L2
ENSG00000125703 ATG4C 160367 sc-eQTL 3.13e-01 -0.0896 0.0886 0.353 MAIT L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 1.02e-02 -0.227 0.0875 0.353 MAIT L2
ENSG00000162607 USP1 508202 sc-eQTL 3.93e-01 0.0754 0.0881 0.353 MAIT L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 8.46e-01 0.0178 0.0916 0.353 MAIT L2
ENSG00000079739 PGM1 -648912 sc-eQTL 5.84e-01 -0.0489 0.0892 0.349 NK_CD56bright L2
ENSG00000088035 ALG6 -423076 sc-eQTL 9.09e-01 -0.0104 0.0915 0.349 NK_CD56bright L2
ENSG00000116641 DOCK7 256113 sc-eQTL 4.68e-01 -0.0576 0.0792 0.349 NK_CD56bright L2
ENSG00000125703 ATG4C 160367 sc-eQTL 9.94e-01 -0.000647 0.0886 0.349 NK_CD56bright L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 5.61e-01 0.0536 0.0922 0.349 NK_CD56bright L2
ENSG00000162607 USP1 508202 sc-eQTL 6.23e-01 0.0468 0.0951 0.349 NK_CD56bright L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 7.58e-01 0.028 0.091 0.349 NK_CD56bright L2
ENSG00000079739 PGM1 -648912 sc-eQTL 8.51e-01 -0.0132 0.0701 0.349 NK_CD56dim L2
ENSG00000088035 ALG6 -423076 sc-eQTL 9.18e-01 0.00916 0.089 0.349 NK_CD56dim L2
ENSG00000116641 DOCK7 256113 sc-eQTL 8.30e-01 -0.0166 0.0774 0.349 NK_CD56dim L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.13e-01 0.029 0.0786 0.349 NK_CD56dim L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 2.22e-01 -0.109 0.0892 0.349 NK_CD56dim L2
ENSG00000162607 USP1 508202 sc-eQTL 4.09e-01 -0.0717 0.0866 0.349 NK_CD56dim L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 2.67e-01 0.107 0.0964 0.349 NK_CD56dim L2
ENSG00000079739 PGM1 -648912 sc-eQTL 2.95e-01 0.0998 0.095 0.356 NK_HLA L2
ENSG00000088035 ALG6 -423076 sc-eQTL 2.23e-01 -0.12 0.0984 0.356 NK_HLA L2
ENSG00000116641 DOCK7 256113 sc-eQTL 1.64e-01 -0.105 0.0751 0.356 NK_HLA L2
ENSG00000125703 ATG4C 160367 sc-eQTL 1.60e-01 0.123 0.0874 0.356 NK_HLA L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 4.52e-01 -0.0694 0.0921 0.356 NK_HLA L2
ENSG00000162607 USP1 508202 sc-eQTL 5.26e-01 0.0612 0.0964 0.356 NK_HLA L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 2.18e-01 0.108 0.0875 0.356 NK_HLA L2
ENSG00000079739 PGM1 -648912 sc-eQTL 5.55e-01 0.0454 0.0769 0.349 NK_cytokine L2
ENSG00000088035 ALG6 -423076 sc-eQTL 1.96e-01 -0.112 0.0866 0.349 NK_cytokine L2
ENSG00000116641 DOCK7 256113 sc-eQTL 7.39e-01 0.0269 0.0805 0.349 NK_cytokine L2
ENSG00000125703 ATG4C 160367 sc-eQTL 3.97e-01 0.0698 0.0823 0.349 NK_cytokine L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 3.24e-01 -0.0842 0.0851 0.349 NK_cytokine L2
ENSG00000162607 USP1 508202 sc-eQTL 7.68e-01 -0.0265 0.0897 0.349 NK_cytokine L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 3.56e-01 0.0839 0.0908 0.349 NK_cytokine L2
ENSG00000079739 PGM1 -648912 sc-eQTL 1.79e-01 0.144 0.106 0.378 PB L2
ENSG00000088035 ALG6 -423076 sc-eQTL 8.40e-02 -0.193 0.111 0.378 PB L2
ENSG00000116641 DOCK7 256113 sc-eQTL 2.00e-01 0.154 0.119 0.378 PB L2
ENSG00000125703 ATG4C 160367 sc-eQTL 9.97e-01 0.000415 0.105 0.378 PB L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 2.56e-01 -0.119 0.104 0.378 PB L2
ENSG00000162607 USP1 508202 sc-eQTL 3.35e-01 0.101 0.104 0.378 PB L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 7.50e-01 -0.0367 0.115 0.378 PB L2
ENSG00000079739 PGM1 -648912 sc-eQTL 2.58e-01 -0.0961 0.0847 0.346 Pro_T L2
ENSG00000088035 ALG6 -423076 sc-eQTL 8.46e-01 0.0168 0.0864 0.346 Pro_T L2
ENSG00000116641 DOCK7 256113 sc-eQTL 5.62e-01 0.0503 0.0867 0.346 Pro_T L2
ENSG00000125703 ATG4C 160367 sc-eQTL 2.74e-01 0.083 0.0757 0.346 Pro_T L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 5.04e-01 0.051 0.0761 0.346 Pro_T L2
ENSG00000162607 USP1 508202 sc-eQTL 8.16e-02 -0.091 0.052 0.346 Pro_T L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 8.39e-01 0.0179 0.0885 0.346 Pro_T L2
ENSG00000079739 PGM1 -648912 sc-eQTL 3.08e-01 -0.0916 0.0896 0.348 Treg L2
ENSG00000088035 ALG6 -423076 sc-eQTL 7.92e-01 0.0254 0.096 0.348 Treg L2
ENSG00000116641 DOCK7 256113 sc-eQTL 9.46e-01 -0.00602 0.0882 0.348 Treg L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.59e-01 -0.0276 0.0901 0.348 Treg L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 4.74e-01 0.0675 0.0941 0.348 Treg L2
ENSG00000162607 USP1 508202 sc-eQTL 5.72e-01 0.0515 0.0911 0.348 Treg L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 6.14e-02 0.168 0.0894 0.348 Treg L2
ENSG00000079739 PGM1 -648912 sc-eQTL 1.75e-02 -0.207 0.0864 0.356 cDC L2
ENSG00000088035 ALG6 -423076 sc-eQTL 3.18e-01 -0.0889 0.0887 0.356 cDC L2
ENSG00000116641 DOCK7 256113 sc-eQTL 7.45e-02 -0.155 0.0865 0.356 cDC L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.06e-02 -0.137 0.0751 0.356 cDC L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 2.45e-01 -0.112 0.0957 0.356 cDC L2
ENSG00000162607 USP1 508202 sc-eQTL 2.50e-01 0.0984 0.0852 0.356 cDC L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 3.68e-01 -0.0696 0.077 0.356 cDC L2
ENSG00000079739 PGM1 -648912 sc-eQTL 7.51e-01 -0.0265 0.0835 0.348 cMono_IL1B L2
ENSG00000088035 ALG6 -423076 sc-eQTL 1.56e-01 0.118 0.0832 0.348 cMono_IL1B L2
ENSG00000116641 DOCK7 256113 sc-eQTL 1.67e-02 -0.21 0.0869 0.348 cMono_IL1B L2
ENSG00000125703 ATG4C 160367 sc-eQTL 3.84e-01 0.054 0.0619 0.348 cMono_IL1B L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 7.02e-01 0.0336 0.0878 0.348 cMono_IL1B L2
ENSG00000162607 USP1 508202 sc-eQTL 5.81e-01 0.0428 0.0774 0.348 cMono_IL1B L2
ENSG00000240563 L1TD1 749650 sc-eQTL 3.16e-01 -0.0781 0.0776 0.348 cMono_IL1B L2
ENSG00000079739 PGM1 -648912 sc-eQTL 5.21e-02 -0.178 0.0912 0.348 cMono_S100A L2
ENSG00000088035 ALG6 -423076 sc-eQTL 6.75e-01 -0.0392 0.0932 0.348 cMono_S100A L2
ENSG00000116641 DOCK7 256113 sc-eQTL 1.22e-01 0.133 0.086 0.348 cMono_S100A L2
ENSG00000125703 ATG4C 160367 sc-eQTL 6.83e-01 -0.0306 0.0748 0.348 cMono_S100A L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 4.87e-01 0.0587 0.0844 0.348 cMono_S100A L2
ENSG00000162607 USP1 508202 sc-eQTL 8.40e-01 0.0176 0.0869 0.348 cMono_S100A L2
ENSG00000240563 L1TD1 749650 sc-eQTL 9.03e-01 0.00886 0.0723 0.348 cMono_S100A L2
ENSG00000079739 PGM1 -648912 sc-eQTL 8.37e-01 0.0213 0.103 0.352 gdT L2
ENSG00000088035 ALG6 -423076 sc-eQTL 5.72e-01 0.0624 0.11 0.352 gdT L2
ENSG00000116641 DOCK7 256113 sc-eQTL 3.47e-01 -0.102 0.108 0.352 gdT L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.34e-01 0.0352 0.103 0.352 gdT L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 8.83e-01 0.0162 0.11 0.352 gdT L2
ENSG00000162607 USP1 508202 sc-eQTL 2.17e-01 0.128 0.103 0.352 gdT L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 7.50e-01 -0.0344 0.108 0.352 gdT L2
ENSG00000079739 PGM1 -648912 sc-eQTL 5.55e-01 -0.0553 0.0934 0.351 intMono L2
ENSG00000088035 ALG6 -423076 sc-eQTL 5.70e-01 -0.0494 0.087 0.351 intMono L2
ENSG00000116641 DOCK7 256113 sc-eQTL 2.41e-01 -0.104 0.0886 0.351 intMono L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.80e-01 0.0237 0.0848 0.351 intMono L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 9.62e-01 0.00445 0.0935 0.351 intMono L2
ENSG00000162607 USP1 508202 sc-eQTL 6.50e-01 0.0431 0.095 0.351 intMono L2
ENSG00000240563 L1TD1 749650 sc-eQTL 8.19e-01 0.0161 0.0699 0.351 intMono L2
ENSG00000079739 PGM1 -648912 sc-eQTL 2.37e-01 0.0993 0.0837 0.357 ncMono L2
ENSG00000088035 ALG6 -423076 sc-eQTL 5.80e-01 -0.0511 0.0923 0.357 ncMono L2
ENSG00000116641 DOCK7 256113 sc-eQTL 4.23e-01 -0.0729 0.0907 0.357 ncMono L2
ENSG00000125703 ATG4C 160367 sc-eQTL 6.09e-01 -0.0435 0.0848 0.357 ncMono L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 2.93e-01 0.0934 0.0885 0.357 ncMono L2
ENSG00000162607 USP1 508202 sc-eQTL 8.14e-01 -0.0214 0.0907 0.357 ncMono L2
ENSG00000240563 L1TD1 749650 sc-eQTL 7.82e-01 -0.0179 0.0643 0.357 ncMono L2
ENSG00000079739 PGM1 -648912 sc-eQTL 1.08e-01 -0.16 0.0991 0.347 pDC L2
ENSG00000088035 ALG6 -423076 sc-eQTL 7.74e-01 0.028 0.0973 0.347 pDC L2
ENSG00000116641 DOCK7 256113 sc-eQTL 5.83e-01 -0.0547 0.0994 0.347 pDC L2
ENSG00000125703 ATG4C 160367 sc-eQTL 7.41e-01 -0.0296 0.0892 0.347 pDC L2
ENSG00000142856 ITGB3BP -649222 sc-eQTL 7.41e-01 0.0331 0.1 0.347 pDC L2
ENSG00000162607 USP1 508202 sc-eQTL 9.23e-01 0.00987 0.102 0.347 pDC L2
ENSG00000203965 EFCAB7 -578873 sc-eQTL 3.59e-02 -0.185 0.0874 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -648912 sc-eQTL 8.00e-01 0.0217 0.0857 0.348 B_Memory LOneK1K
ENSG00000088035 ALG6 -423076 sc-eQTL 1.55e-01 -0.135 0.0943 0.348 B_Memory LOneK1K
ENSG00000116641 DOCK7 256113 sc-eQTL 3.90e-01 0.0707 0.0821 0.348 B_Memory LOneK1K
ENSG00000125703 ATG4C 160367 sc-eQTL 9.04e-01 -0.00801 0.0665 0.348 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -649222 sc-eQTL 6.92e-01 0.0347 0.0873 0.348 B_Memory LOneK1K
ENSG00000162607 USP1 508202 sc-eQTL 2.70e-01 0.0935 0.0846 0.348 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -578873 sc-eQTL 2.84e-01 -0.0975 0.0908 0.348 B_Memory LOneK1K
ENSG00000079739 PGM1 -648912 sc-eQTL 5.21e-01 -0.0581 0.0903 0.348 B_Naive LOneK1K
ENSG00000088035 ALG6 -423076 sc-eQTL 5.13e-01 0.0609 0.093 0.348 B_Naive LOneK1K
ENSG00000116641 DOCK7 256113 sc-eQTL 8.22e-02 -0.151 0.0863 0.348 B_Naive LOneK1K
ENSG00000125703 ATG4C 160367 sc-eQTL 7.64e-01 0.0199 0.0663 0.348 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -649222 sc-eQTL 9.61e-01 0.00464 0.0938 0.348 B_Naive LOneK1K
ENSG00000162607 USP1 508202 sc-eQTL 2.11e-01 0.101 0.0803 0.348 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -578873 sc-eQTL 4.55e-01 0.0704 0.0941 0.348 B_Naive LOneK1K
ENSG00000079739 PGM1 -648912 sc-eQTL 1.22e-01 -0.133 0.0854 0.348 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -423076 sc-eQTL 4.94e-01 0.057 0.0831 0.348 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 256113 sc-eQTL 1.90e-01 -0.11 0.0834 0.348 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 160367 sc-eQTL 3.59e-01 0.0531 0.0578 0.348 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -649222 sc-eQTL 4.41e-01 0.0661 0.0856 0.348 CD14_Mono LOneK1K
ENSG00000162607 USP1 508202 sc-eQTL 8.15e-01 0.0171 0.0732 0.348 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 749650 sc-eQTL 4.47e-01 -0.0604 0.0793 0.348 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -648912 sc-eQTL 2.35e-01 0.096 0.0805 0.349 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -423076 sc-eQTL 2.73e-01 -0.101 0.0915 0.349 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 256113 sc-eQTL 3.73e-02 -0.188 0.0898 0.349 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 160367 sc-eQTL 7.81e-01 -0.0215 0.0774 0.349 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -649222 sc-eQTL 3.06e-01 0.092 0.0896 0.349 CD16_Mono LOneK1K
ENSG00000162607 USP1 508202 sc-eQTL 6.80e-01 0.0349 0.0844 0.349 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 749650 sc-eQTL 6.64e-01 -0.0251 0.0576 0.349 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -648912 sc-eQTL 5.59e-01 0.0404 0.0689 0.349 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -423076 sc-eQTL 2.56e-01 -0.0941 0.0826 0.349 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 256113 sc-eQTL 8.62e-01 0.0129 0.0742 0.349 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 160367 sc-eQTL 1.99e-01 0.095 0.0738 0.349 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -649222 sc-eQTL 1.23e-01 -0.135 0.0873 0.349 NK_CD56dim LOneK1K
ENSG00000162607 USP1 508202 sc-eQTL 8.95e-01 -0.0106 0.0797 0.349 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -578873 sc-eQTL 4.82e-02 0.191 0.0961 0.349 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -648912 eQTL 0.275 -0.0201 0.0184 0.0012 0.0 0.37
ENSG00000116641 DOCK7 256131 eQTL 0.034 -0.0484 0.0228 0.0 0.0 0.37
ENSG00000162607 USP1 508202 eQTL 0.0299 -0.0288 0.0133 0.0 0.0 0.37

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina