logo

Genes within 1Mb (chr1:62939018:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -654393 sc-eQTL 5.12e-01 0.0495 0.0753 0.479 B L1
ENSG00000088035 ALG6 -428557 sc-eQTL 8.74e-01 -0.0125 0.0781 0.479 B L1
ENSG00000116641 DOCK7 250632 sc-eQTL 8.65e-01 -0.0133 0.0781 0.479 B L1
ENSG00000125703 ATG4C 154886 sc-eQTL 5.15e-01 0.0354 0.0542 0.479 B L1
ENSG00000142856 ITGB3BP -654703 sc-eQTL 3.97e-01 0.0732 0.0863 0.479 B L1
ENSG00000162607 USP1 502721 sc-eQTL 4.93e-02 -0.147 0.0743 0.479 B L1
ENSG00000203965 EFCAB7 -584354 sc-eQTL 8.76e-01 0.0138 0.0885 0.479 B L1
ENSG00000079739 PGM1 -654393 sc-eQTL 2.72e-01 0.0726 0.0659 0.479 CD4T L1
ENSG00000088035 ALG6 -428557 sc-eQTL 5.46e-01 -0.044 0.0729 0.479 CD4T L1
ENSG00000116641 DOCK7 250632 sc-eQTL 9.89e-01 -0.000982 0.0739 0.479 CD4T L1
ENSG00000125703 ATG4C 154886 sc-eQTL 9.96e-01 0.000295 0.0596 0.479 CD4T L1
ENSG00000142856 ITGB3BP -654703 sc-eQTL 5.07e-01 0.0562 0.0846 0.479 CD4T L1
ENSG00000162607 USP1 502721 sc-eQTL 8.49e-01 -0.011 0.0579 0.479 CD4T L1
ENSG00000203965 EFCAB7 -584354 sc-eQTL 3.55e-01 -0.0703 0.0758 0.479 CD4T L1
ENSG00000079739 PGM1 -654393 sc-eQTL 2.39e-01 -0.0857 0.0725 0.479 CD8T L1
ENSG00000088035 ALG6 -428557 sc-eQTL 3.31e-01 -0.0779 0.0801 0.479 CD8T L1
ENSG00000116641 DOCK7 250632 sc-eQTL 1.55e-02 0.196 0.0802 0.479 CD8T L1
ENSG00000125703 ATG4C 154886 sc-eQTL 8.92e-01 0.0105 0.0772 0.479 CD8T L1
ENSG00000142856 ITGB3BP -654703 sc-eQTL 4.94e-01 0.0591 0.0863 0.479 CD8T L1
ENSG00000162607 USP1 502721 sc-eQTL 1.06e-01 0.109 0.0669 0.479 CD8T L1
ENSG00000203965 EFCAB7 -584354 sc-eQTL 2.12e-01 -0.107 0.0858 0.479 CD8T L1
ENSG00000079739 PGM1 -654393 sc-eQTL 8.60e-02 0.139 0.0806 0.482 DC L1
ENSG00000088035 ALG6 -428557 sc-eQTL 1.63e-01 0.117 0.0834 0.482 DC L1
ENSG00000116641 DOCK7 250632 sc-eQTL 6.42e-02 0.158 0.0852 0.482 DC L1
ENSG00000125703 ATG4C 154886 sc-eQTL 1.14e-02 0.169 0.0661 0.482 DC L1
ENSG00000142856 ITGB3BP -654703 sc-eQTL 2.26e-01 0.114 0.0936 0.482 DC L1
ENSG00000162607 USP1 502721 sc-eQTL 9.24e-01 -0.00789 0.082 0.482 DC L1
ENSG00000203965 EFCAB7 -584354 sc-eQTL 1.09e-02 0.207 0.0805 0.482 DC L1
ENSG00000079739 PGM1 -654393 sc-eQTL 1.58e-01 0.113 0.0796 0.479 Mono L1
ENSG00000088035 ALG6 -428557 sc-eQTL 4.53e-01 -0.0626 0.0834 0.479 Mono L1
ENSG00000116641 DOCK7 250632 sc-eQTL 2.33e-01 0.0963 0.0805 0.479 Mono L1
ENSG00000125703 ATG4C 154886 sc-eQTL 8.11e-01 -0.013 0.0545 0.479 Mono L1
ENSG00000142856 ITGB3BP -654703 sc-eQTL 3.76e-01 -0.0764 0.0861 0.479 Mono L1
ENSG00000162607 USP1 502721 sc-eQTL 7.42e-01 -0.0233 0.0708 0.479 Mono L1
ENSG00000240563 L1TD1 744169 sc-eQTL 7.76e-01 0.0188 0.0661 0.479 Mono L1
ENSG00000079739 PGM1 -654393 sc-eQTL 4.15e-01 -0.0545 0.0667 0.479 NK L1
ENSG00000088035 ALG6 -428557 sc-eQTL 5.70e-02 0.149 0.0777 0.479 NK L1
ENSG00000116641 DOCK7 250632 sc-eQTL 4.43e-01 0.0496 0.0644 0.479 NK L1
ENSG00000125703 ATG4C 154886 sc-eQTL 3.73e-01 -0.0617 0.0692 0.479 NK L1
ENSG00000142856 ITGB3BP -654703 sc-eQTL 9.99e-02 0.141 0.0856 0.479 NK L1
ENSG00000162607 USP1 502721 sc-eQTL 5.94e-01 -0.0411 0.0769 0.479 NK L1
ENSG00000203965 EFCAB7 -584354 sc-eQTL 3.25e-01 -0.0922 0.0933 0.479 NK L1
ENSG00000079739 PGM1 -654393 sc-eQTL 7.75e-01 -0.0216 0.0755 0.479 Other_T L1
ENSG00000088035 ALG6 -428557 sc-eQTL 8.65e-01 -0.0129 0.0758 0.479 Other_T L1
ENSG00000116641 DOCK7 250632 sc-eQTL 2.55e-01 0.0881 0.0772 0.479 Other_T L1
ENSG00000125703 ATG4C 154886 sc-eQTL 7.35e-01 -0.0227 0.067 0.479 Other_T L1
ENSG00000142856 ITGB3BP -654703 sc-eQTL 1.74e-01 0.0807 0.0592 0.479 Other_T L1
ENSG00000162607 USP1 502721 sc-eQTL 6.15e-01 -0.0259 0.0515 0.479 Other_T L1
ENSG00000203965 EFCAB7 -584354 sc-eQTL 7.38e-01 0.0307 0.0917 0.479 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -654393 sc-eQTL 8.13e-01 0.025 0.105 0.482 B_Activated L2
ENSG00000088035 ALG6 -428557 sc-eQTL 8.76e-02 0.172 0.1 0.482 B_Activated L2
ENSG00000116641 DOCK7 250632 sc-eQTL 6.62e-01 -0.0411 0.094 0.482 B_Activated L2
ENSG00000125703 ATG4C 154886 sc-eQTL 5.75e-01 0.0555 0.0988 0.482 B_Activated L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 7.15e-01 0.0353 0.0966 0.482 B_Activated L2
ENSG00000162607 USP1 502721 sc-eQTL 1.96e-01 0.135 0.104 0.482 B_Activated L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 7.05e-01 -0.0347 0.0914 0.482 B_Activated L2
ENSG00000079739 PGM1 -654393 sc-eQTL 4.76e-01 0.0649 0.0909 0.479 B_Intermediate L2
ENSG00000088035 ALG6 -428557 sc-eQTL 5.01e-01 0.0623 0.0924 0.479 B_Intermediate L2
ENSG00000116641 DOCK7 250632 sc-eQTL 3.03e-01 -0.0909 0.0881 0.479 B_Intermediate L2
ENSG00000125703 ATG4C 154886 sc-eQTL 9.06e-01 -0.00889 0.0748 0.479 B_Intermediate L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 4.70e-01 -0.0644 0.089 0.479 B_Intermediate L2
ENSG00000162607 USP1 502721 sc-eQTL 9.02e-02 0.15 0.0883 0.479 B_Intermediate L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 8.15e-01 0.0206 0.0882 0.479 B_Intermediate L2
ENSG00000079739 PGM1 -654393 sc-eQTL 1.04e-01 0.145 0.0888 0.481 B_Memory L2
ENSG00000088035 ALG6 -428557 sc-eQTL 5.45e-01 0.055 0.0908 0.481 B_Memory L2
ENSG00000116641 DOCK7 250632 sc-eQTL 4.76e-01 -0.0608 0.0851 0.481 B_Memory L2
ENSG00000125703 ATG4C 154886 sc-eQTL 2.05e-01 0.103 0.0807 0.481 B_Memory L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 4.86e-01 -0.0647 0.0926 0.481 B_Memory L2
ENSG00000162607 USP1 502721 sc-eQTL 1.13e-01 -0.148 0.093 0.481 B_Memory L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 6.04e-02 0.172 0.0913 0.481 B_Memory L2
ENSG00000079739 PGM1 -654393 sc-eQTL 8.61e-01 -0.016 0.0909 0.479 B_Naive1 L2
ENSG00000088035 ALG6 -428557 sc-eQTL 4.47e-02 -0.183 0.0904 0.479 B_Naive1 L2
ENSG00000116641 DOCK7 250632 sc-eQTL 9.57e-01 -0.00472 0.0875 0.479 B_Naive1 L2
ENSG00000125703 ATG4C 154886 sc-eQTL 6.69e-01 0.0288 0.0674 0.479 B_Naive1 L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 2.94e-01 0.0938 0.0892 0.479 B_Naive1 L2
ENSG00000162607 USP1 502721 sc-eQTL 2.64e-01 -0.0877 0.0784 0.479 B_Naive1 L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 7.93e-01 -0.025 0.0954 0.479 B_Naive1 L2
ENSG00000079739 PGM1 -654393 sc-eQTL 1.09e-01 0.143 0.0891 0.481 B_Naive2 L2
ENSG00000088035 ALG6 -428557 sc-eQTL 5.29e-01 -0.0589 0.0934 0.481 B_Naive2 L2
ENSG00000116641 DOCK7 250632 sc-eQTL 8.81e-01 -0.0135 0.0899 0.481 B_Naive2 L2
ENSG00000125703 ATG4C 154886 sc-eQTL 3.57e-01 -0.0797 0.0864 0.481 B_Naive2 L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 8.31e-01 0.0201 0.0939 0.481 B_Naive2 L2
ENSG00000162607 USP1 502721 sc-eQTL 5.23e-01 -0.0572 0.0893 0.481 B_Naive2 L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 4.51e-01 -0.0705 0.0933 0.481 B_Naive2 L2
ENSG00000079739 PGM1 -654393 sc-eQTL 2.74e-01 -0.1 0.0916 0.482 CD4_CTL L2
ENSG00000088035 ALG6 -428557 sc-eQTL 2.70e-02 0.214 0.0959 0.482 CD4_CTL L2
ENSG00000116641 DOCK7 250632 sc-eQTL 4.11e-01 0.0698 0.0848 0.482 CD4_CTL L2
ENSG00000125703 ATG4C 154886 sc-eQTL 8.36e-01 -0.0182 0.0879 0.482 CD4_CTL L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 9.53e-01 -0.00552 0.094 0.482 CD4_CTL L2
ENSG00000162607 USP1 502721 sc-eQTL 6.53e-01 0.0403 0.0894 0.482 CD4_CTL L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 9.37e-01 -0.0071 0.0893 0.482 CD4_CTL L2
ENSG00000079739 PGM1 -654393 sc-eQTL 6.76e-01 0.031 0.0741 0.479 CD4_Naive L2
ENSG00000088035 ALG6 -428557 sc-eQTL 7.55e-01 -0.0251 0.0805 0.479 CD4_Naive L2
ENSG00000116641 DOCK7 250632 sc-eQTL 6.51e-01 -0.0358 0.0791 0.479 CD4_Naive L2
ENSG00000125703 ATG4C 154886 sc-eQTL 5.33e-01 0.0436 0.0699 0.479 CD4_Naive L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 7.52e-01 0.027 0.0854 0.479 CD4_Naive L2
ENSG00000162607 USP1 502721 sc-eQTL 6.64e-01 -0.0284 0.0652 0.479 CD4_Naive L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 5.15e-01 -0.0552 0.0847 0.479 CD4_Naive L2
ENSG00000079739 PGM1 -654393 sc-eQTL 2.47e-01 0.0896 0.0772 0.479 CD4_TCM L2
ENSG00000088035 ALG6 -428557 sc-eQTL 2.77e-01 -0.0977 0.0897 0.479 CD4_TCM L2
ENSG00000116641 DOCK7 250632 sc-eQTL 7.81e-01 0.0222 0.0797 0.479 CD4_TCM L2
ENSG00000125703 ATG4C 154886 sc-eQTL 8.48e-01 0.0149 0.0776 0.479 CD4_TCM L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 8.56e-01 0.0166 0.0914 0.479 CD4_TCM L2
ENSG00000162607 USP1 502721 sc-eQTL 8.43e-01 0.0149 0.075 0.479 CD4_TCM L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 3.19e-01 -0.0882 0.0883 0.479 CD4_TCM L2
ENSG00000079739 PGM1 -654393 sc-eQTL 1.54e-01 0.128 0.0896 0.479 CD4_TEM L2
ENSG00000088035 ALG6 -428557 sc-eQTL 5.96e-01 -0.048 0.0904 0.479 CD4_TEM L2
ENSG00000116641 DOCK7 250632 sc-eQTL 3.15e-01 -0.0886 0.088 0.479 CD4_TEM L2
ENSG00000125703 ATG4C 154886 sc-eQTL 5.64e-01 -0.0494 0.0856 0.479 CD4_TEM L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 7.69e-01 0.026 0.0884 0.479 CD4_TEM L2
ENSG00000162607 USP1 502721 sc-eQTL 1.09e-01 0.134 0.0832 0.479 CD4_TEM L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 3.84e-01 0.0797 0.0914 0.479 CD4_TEM L2
ENSG00000079739 PGM1 -654393 sc-eQTL 7.75e-02 -0.145 0.082 0.479 CD8_CTL L2
ENSG00000088035 ALG6 -428557 sc-eQTL 2.78e-01 0.0953 0.0876 0.479 CD8_CTL L2
ENSG00000116641 DOCK7 250632 sc-eQTL 1.81e-01 0.111 0.083 0.479 CD8_CTL L2
ENSG00000125703 ATG4C 154886 sc-eQTL 2.99e-01 0.0922 0.0885 0.479 CD8_CTL L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 4.79e-01 0.0653 0.0921 0.479 CD8_CTL L2
ENSG00000162607 USP1 502721 sc-eQTL 3.43e-01 0.0783 0.0824 0.479 CD8_CTL L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 6.57e-01 -0.042 0.0944 0.479 CD8_CTL L2
ENSG00000079739 PGM1 -654393 sc-eQTL 8.98e-01 -0.0109 0.0846 0.479 CD8_Naive L2
ENSG00000088035 ALG6 -428557 sc-eQTL 5.34e-02 -0.169 0.0868 0.479 CD8_Naive L2
ENSG00000116641 DOCK7 250632 sc-eQTL 6.42e-02 0.167 0.0898 0.479 CD8_Naive L2
ENSG00000125703 ATG4C 154886 sc-eQTL 4.27e-01 -0.069 0.0868 0.479 CD8_Naive L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 2.95e-01 0.0922 0.0878 0.479 CD8_Naive L2
ENSG00000162607 USP1 502721 sc-eQTL 1.21e-01 0.115 0.074 0.479 CD8_Naive L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 5.63e-01 -0.0481 0.0829 0.479 CD8_Naive L2
ENSG00000079739 PGM1 -654393 sc-eQTL 5.46e-01 -0.0558 0.0922 0.491 CD8_TCM L2
ENSG00000088035 ALG6 -428557 sc-eQTL 9.82e-01 -0.00215 0.0934 0.491 CD8_TCM L2
ENSG00000116641 DOCK7 250632 sc-eQTL 5.00e-01 -0.0615 0.0911 0.491 CD8_TCM L2
ENSG00000125703 ATG4C 154886 sc-eQTL 1.30e-02 -0.23 0.0918 0.491 CD8_TCM L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 3.04e-01 -0.0931 0.0904 0.491 CD8_TCM L2
ENSG00000162607 USP1 502721 sc-eQTL 6.45e-01 -0.0402 0.0872 0.491 CD8_TCM L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 7.97e-01 -0.0238 0.0923 0.491 CD8_TCM L2
ENSG00000079739 PGM1 -654393 sc-eQTL 5.69e-01 0.0541 0.0948 0.475 CD8_TEM L2
ENSG00000088035 ALG6 -428557 sc-eQTL 7.34e-01 -0.0324 0.0952 0.475 CD8_TEM L2
ENSG00000116641 DOCK7 250632 sc-eQTL 3.12e-01 0.0933 0.0921 0.475 CD8_TEM L2
ENSG00000125703 ATG4C 154886 sc-eQTL 7.94e-01 0.0232 0.0887 0.475 CD8_TEM L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 1.52e-01 -0.137 0.0956 0.475 CD8_TEM L2
ENSG00000162607 USP1 502721 sc-eQTL 7.74e-02 0.161 0.0909 0.475 CD8_TEM L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 1.66e-01 -0.129 0.0927 0.475 CD8_TEM L2
ENSG00000079739 PGM1 -654393 sc-eQTL 2.48e-01 -0.102 0.0882 0.474 MAIT L2
ENSG00000088035 ALG6 -428557 sc-eQTL 6.93e-02 0.159 0.0869 0.474 MAIT L2
ENSG00000116641 DOCK7 250632 sc-eQTL 5.55e-01 0.0495 0.0838 0.474 MAIT L2
ENSG00000125703 ATG4C 154886 sc-eQTL 5.83e-01 -0.0486 0.0884 0.474 MAIT L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 1.41e-01 0.13 0.0882 0.474 MAIT L2
ENSG00000162607 USP1 502721 sc-eQTL 7.48e-01 0.0283 0.0879 0.474 MAIT L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 4.79e-01 0.0646 0.0912 0.474 MAIT L2
ENSG00000079739 PGM1 -654393 sc-eQTL 6.81e-01 0.0355 0.0863 0.478 NK_CD56bright L2
ENSG00000088035 ALG6 -428557 sc-eQTL 9.71e-01 -0.00324 0.0886 0.478 NK_CD56bright L2
ENSG00000116641 DOCK7 250632 sc-eQTL 5.81e-01 0.0424 0.0767 0.478 NK_CD56bright L2
ENSG00000125703 ATG4C 154886 sc-eQTL 6.66e-01 0.0371 0.0857 0.478 NK_CD56bright L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 4.73e-02 -0.176 0.0884 0.478 NK_CD56bright L2
ENSG00000162607 USP1 502721 sc-eQTL 7.20e-01 -0.0331 0.092 0.478 NK_CD56bright L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 5.31e-01 0.0552 0.088 0.478 NK_CD56bright L2
ENSG00000079739 PGM1 -654393 sc-eQTL 3.48e-01 -0.065 0.0691 0.478 NK_CD56dim L2
ENSG00000088035 ALG6 -428557 sc-eQTL 1.52e-01 0.126 0.0874 0.478 NK_CD56dim L2
ENSG00000116641 DOCK7 250632 sc-eQTL 2.73e-01 0.0838 0.0762 0.478 NK_CD56dim L2
ENSG00000125703 ATG4C 154886 sc-eQTL 4.22e-01 -0.0624 0.0775 0.478 NK_CD56dim L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 8.63e-02 0.151 0.0877 0.478 NK_CD56dim L2
ENSG00000162607 USP1 502721 sc-eQTL 9.47e-01 -0.0057 0.0857 0.478 NK_CD56dim L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 6.37e-01 -0.0451 0.0954 0.478 NK_CD56dim L2
ENSG00000079739 PGM1 -654393 sc-eQTL 5.37e-01 -0.0576 0.0931 0.47 NK_HLA L2
ENSG00000088035 ALG6 -428557 sc-eQTL 2.15e-01 0.12 0.0963 0.47 NK_HLA L2
ENSG00000116641 DOCK7 250632 sc-eQTL 7.56e-01 0.023 0.0739 0.47 NK_HLA L2
ENSG00000125703 ATG4C 154886 sc-eQTL 3.12e-01 -0.0869 0.0857 0.47 NK_HLA L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 1.45e-01 0.131 0.0897 0.47 NK_HLA L2
ENSG00000162607 USP1 502721 sc-eQTL 4.08e-01 -0.0782 0.0943 0.47 NK_HLA L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 1.74e-01 -0.117 0.0855 0.47 NK_HLA L2
ENSG00000079739 PGM1 -654393 sc-eQTL 5.08e-01 -0.0503 0.0758 0.478 NK_cytokine L2
ENSG00000088035 ALG6 -428557 sc-eQTL 2.72e-01 0.0942 0.0855 0.478 NK_cytokine L2
ENSG00000116641 DOCK7 250632 sc-eQTL 5.44e-01 -0.0482 0.0794 0.478 NK_cytokine L2
ENSG00000125703 ATG4C 154886 sc-eQTL 3.88e-01 -0.0702 0.0811 0.478 NK_cytokine L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 4.18e-01 0.0682 0.0841 0.478 NK_cytokine L2
ENSG00000162607 USP1 502721 sc-eQTL 9.44e-01 -0.00622 0.0885 0.478 NK_cytokine L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 9.63e-01 0.00412 0.0897 0.478 NK_cytokine L2
ENSG00000079739 PGM1 -654393 sc-eQTL 9.67e-01 0.0043 0.104 0.456 PB L2
ENSG00000088035 ALG6 -428557 sc-eQTL 6.14e-02 0.204 0.108 0.456 PB L2
ENSG00000116641 DOCK7 250632 sc-eQTL 6.69e-01 -0.0502 0.117 0.456 PB L2
ENSG00000125703 ATG4C 154886 sc-eQTL 8.62e-01 0.0177 0.102 0.456 PB L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 9.68e-01 0.00406 0.102 0.456 PB L2
ENSG00000162607 USP1 502721 sc-eQTL 1.95e-01 -0.131 0.101 0.456 PB L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 6.01e-01 0.0586 0.112 0.456 PB L2
ENSG00000079739 PGM1 -654393 sc-eQTL 1.77e-01 0.112 0.0825 0.48 Pro_T L2
ENSG00000088035 ALG6 -428557 sc-eQTL 3.04e-01 0.0866 0.0841 0.48 Pro_T L2
ENSG00000116641 DOCK7 250632 sc-eQTL 8.56e-01 -0.0154 0.0846 0.48 Pro_T L2
ENSG00000125703 ATG4C 154886 sc-eQTL 4.95e-01 -0.0505 0.0739 0.48 Pro_T L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 9.70e-01 -0.00281 0.0743 0.48 Pro_T L2
ENSG00000162607 USP1 502721 sc-eQTL 3.36e-01 0.0491 0.0509 0.48 Pro_T L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 4.40e-01 -0.0666 0.0861 0.48 Pro_T L2
ENSG00000079739 PGM1 -654393 sc-eQTL 3.69e-01 0.08 0.0889 0.479 Treg L2
ENSG00000088035 ALG6 -428557 sc-eQTL 2.15e-01 -0.118 0.0949 0.479 Treg L2
ENSG00000116641 DOCK7 250632 sc-eQTL 3.16e-01 0.0877 0.0872 0.479 Treg L2
ENSG00000125703 ATG4C 154886 sc-eQTL 7.17e-01 0.0324 0.0893 0.479 Treg L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 9.88e-01 -0.00144 0.0934 0.479 Treg L2
ENSG00000162607 USP1 502721 sc-eQTL 6.03e-01 0.0471 0.0903 0.479 Treg L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 2.40e-02 -0.201 0.0883 0.479 Treg L2
ENSG00000079739 PGM1 -654393 sc-eQTL 6.00e-02 0.164 0.0866 0.478 cDC L2
ENSG00000088035 ALG6 -428557 sc-eQTL 5.55e-01 0.0523 0.0886 0.478 cDC L2
ENSG00000116641 DOCK7 250632 sc-eQTL 1.40e-01 0.128 0.0865 0.478 cDC L2
ENSG00000125703 ATG4C 154886 sc-eQTL 1.35e-01 0.113 0.0751 0.478 cDC L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 3.64e-01 0.0869 0.0955 0.478 cDC L2
ENSG00000162607 USP1 502721 sc-eQTL 3.27e-01 -0.0836 0.085 0.478 cDC L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 9.01e-01 -0.00962 0.0769 0.478 cDC L2
ENSG00000079739 PGM1 -654393 sc-eQTL 3.12e-01 0.0829 0.0817 0.479 cMono_IL1B L2
ENSG00000088035 ALG6 -428557 sc-eQTL 2.18e-01 -0.101 0.0817 0.479 cMono_IL1B L2
ENSG00000116641 DOCK7 250632 sc-eQTL 9.45e-02 0.144 0.0859 0.479 cMono_IL1B L2
ENSG00000125703 ATG4C 154886 sc-eQTL 3.83e-01 -0.0531 0.0607 0.479 cMono_IL1B L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 6.73e-01 -0.0364 0.0861 0.479 cMono_IL1B L2
ENSG00000162607 USP1 502721 sc-eQTL 7.86e-01 -0.0207 0.0759 0.479 cMono_IL1B L2
ENSG00000240563 L1TD1 744169 sc-eQTL 4.24e-01 0.061 0.0762 0.479 cMono_IL1B L2
ENSG00000079739 PGM1 -654393 sc-eQTL 1.51e-02 0.221 0.0903 0.479 cMono_S100A L2
ENSG00000088035 ALG6 -428557 sc-eQTL 1.94e-01 -0.12 0.0924 0.479 cMono_S100A L2
ENSG00000116641 DOCK7 250632 sc-eQTL 4.71e-01 -0.062 0.086 0.479 cMono_S100A L2
ENSG00000125703 ATG4C 154886 sc-eQTL 3.41e-01 0.071 0.0743 0.479 cMono_S100A L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 3.82e-01 -0.0736 0.0839 0.479 cMono_S100A L2
ENSG00000162607 USP1 502721 sc-eQTL 8.88e-01 -0.0122 0.0865 0.479 cMono_S100A L2
ENSG00000240563 L1TD1 744169 sc-eQTL 1.81e-01 -0.0962 0.0717 0.479 cMono_S100A L2
ENSG00000079739 PGM1 -654393 sc-eQTL 7.06e-01 0.0403 0.107 0.473 gdT L2
ENSG00000088035 ALG6 -428557 sc-eQTL 4.98e-02 -0.222 0.112 0.473 gdT L2
ENSG00000116641 DOCK7 250632 sc-eQTL 1.31e-01 0.168 0.111 0.473 gdT L2
ENSG00000125703 ATG4C 154886 sc-eQTL 4.89e-01 -0.0739 0.107 0.473 gdT L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 5.89e-01 0.0612 0.113 0.473 gdT L2
ENSG00000162607 USP1 502721 sc-eQTL 5.75e-01 0.0602 0.107 0.473 gdT L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 7.16e-01 -0.0406 0.111 0.473 gdT L2
ENSG00000079739 PGM1 -654393 sc-eQTL 2.52e-01 0.105 0.0917 0.478 intMono L2
ENSG00000088035 ALG6 -428557 sc-eQTL 7.56e-01 0.0266 0.0857 0.478 intMono L2
ENSG00000116641 DOCK7 250632 sc-eQTL 1.45e-01 0.127 0.087 0.478 intMono L2
ENSG00000125703 ATG4C 154886 sc-eQTL 4.68e-01 0.0606 0.0834 0.478 intMono L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 1.01e-01 -0.151 0.0914 0.478 intMono L2
ENSG00000162607 USP1 502721 sc-eQTL 1.85e-01 -0.124 0.0932 0.478 intMono L2
ENSG00000240563 L1TD1 744169 sc-eQTL 8.65e-01 0.0117 0.0688 0.478 intMono L2
ENSG00000079739 PGM1 -654393 sc-eQTL 7.15e-01 -0.0307 0.084 0.468 ncMono L2
ENSG00000088035 ALG6 -428557 sc-eQTL 4.91e-02 0.181 0.0915 0.468 ncMono L2
ENSG00000116641 DOCK7 250632 sc-eQTL 7.36e-01 0.0307 0.0909 0.468 ncMono L2
ENSG00000125703 ATG4C 154886 sc-eQTL 7.76e-01 0.0242 0.0849 0.468 ncMono L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 6.53e-01 -0.04 0.0888 0.468 ncMono L2
ENSG00000162607 USP1 502721 sc-eQTL 1.46e-01 -0.132 0.0903 0.468 ncMono L2
ENSG00000240563 L1TD1 744169 sc-eQTL 7.64e-01 0.0194 0.0644 0.468 ncMono L2
ENSG00000079739 PGM1 -654393 sc-eQTL 6.12e-01 0.0521 0.102 0.483 pDC L2
ENSG00000088035 ALG6 -428557 sc-eQTL 9.54e-01 0.00579 0.0999 0.483 pDC L2
ENSG00000116641 DOCK7 250632 sc-eQTL 3.54e-01 0.0946 0.102 0.483 pDC L2
ENSG00000125703 ATG4C 154886 sc-eQTL 3.55e-01 0.0846 0.0913 0.483 pDC L2
ENSG00000142856 ITGB3BP -654703 sc-eQTL 9.99e-01 0.000146 0.103 0.483 pDC L2
ENSG00000162607 USP1 502721 sc-eQTL 6.87e-01 0.0423 0.105 0.483 pDC L2
ENSG00000203965 EFCAB7 -584354 sc-eQTL 1.19e-01 0.141 0.0902 0.483 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -654393 sc-eQTL 2.68e-01 0.0933 0.084 0.479 B_Memory LOneK1K
ENSG00000088035 ALG6 -428557 sc-eQTL 1.55e-01 0.132 0.0927 0.479 B_Memory LOneK1K
ENSG00000116641 DOCK7 250632 sc-eQTL 8.64e-02 -0.138 0.0803 0.479 B_Memory LOneK1K
ENSG00000125703 ATG4C 154886 sc-eQTL 4.58e-01 0.0485 0.0653 0.479 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -654703 sc-eQTL 3.74e-01 -0.0764 0.0857 0.479 B_Memory LOneK1K
ENSG00000162607 USP1 502721 sc-eQTL 7.95e-01 0.0217 0.0834 0.479 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -584354 sc-eQTL 3.28e-01 0.0875 0.0893 0.479 B_Memory LOneK1K
ENSG00000079739 PGM1 -654393 sc-eQTL 5.04e-01 0.0593 0.0887 0.479 B_Naive LOneK1K
ENSG00000088035 ALG6 -428557 sc-eQTL 5.89e-02 -0.172 0.0907 0.479 B_Naive LOneK1K
ENSG00000116641 DOCK7 250632 sc-eQTL 8.51e-01 0.016 0.0854 0.479 B_Naive LOneK1K
ENSG00000125703 ATG4C 154886 sc-eQTL 8.26e-01 -0.0144 0.0652 0.479 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -654703 sc-eQTL 2.25e-01 0.112 0.0918 0.479 B_Naive LOneK1K
ENSG00000162607 USP1 502721 sc-eQTL 6.66e-02 -0.145 0.0785 0.479 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -584354 sc-eQTL 3.50e-01 -0.0866 0.0924 0.479 B_Naive LOneK1K
ENSG00000079739 PGM1 -654393 sc-eQTL 4.70e-02 0.167 0.0837 0.479 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -428557 sc-eQTL 1.84e-01 -0.109 0.0814 0.479 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 250632 sc-eQTL 1.90e-01 0.108 0.082 0.479 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 154886 sc-eQTL 7.99e-01 -0.0145 0.0569 0.479 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -654703 sc-eQTL 4.28e-01 -0.0668 0.0841 0.479 CD14_Mono LOneK1K
ENSG00000162607 USP1 502721 sc-eQTL 7.15e-01 0.0263 0.0719 0.479 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 744169 sc-eQTL 8.00e-01 0.0198 0.078 0.479 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -654393 sc-eQTL 5.53e-01 -0.047 0.0791 0.481 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -428557 sc-eQTL 9.92e-02 0.148 0.0894 0.481 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 250632 sc-eQTL 4.76e-02 0.176 0.0882 0.481 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 154886 sc-eQTL 8.53e-01 0.0141 0.0759 0.481 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -654703 sc-eQTL 7.09e-02 -0.159 0.0874 0.481 CD16_Mono LOneK1K
ENSG00000162607 USP1 502721 sc-eQTL 1.30e-01 -0.125 0.0823 0.481 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 744169 sc-eQTL 4.36e-01 0.044 0.0564 0.481 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -654393 sc-eQTL 4.44e-01 -0.0521 0.068 0.478 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -428557 sc-eQTL 5.46e-02 0.157 0.081 0.478 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 250632 sc-eQTL 9.27e-01 -0.00673 0.0732 0.478 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 154886 sc-eQTL 1.98e-01 -0.0941 0.0728 0.478 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -654703 sc-eQTL 6.09e-02 0.162 0.0859 0.478 NK_CD56dim LOneK1K
ENSG00000162607 USP1 502721 sc-eQTL 5.01e-01 -0.0529 0.0786 0.478 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -584354 sc-eQTL 3.55e-01 -0.0885 0.0955 0.478 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 250650 eQTL 0.0242 0.0492 0.0218 0.0 0.0 0.427
ENSG00000125703 ATG4C 154886 eQTL 0.0122 0.0415 0.0166 0.0 0.0 0.427
ENSG00000132855 ANGPTL3 341531 pQTL 0.0161 0.0684 0.0284 0.0 0.0 0.436
ENSG00000162607 USP1 502721 eQTL 0.03 0.0276 0.0127 0.0 0.0 0.427

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina