logo

Genes within 1Mb (chr1:62893889:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -699522 sc-eQTL 2.91e-01 -0.0827 0.0782 0.368 B L1
ENSG00000088035 ALG6 -473686 sc-eQTL 3.04e-01 -0.0834 0.081 0.368 B L1
ENSG00000116641 DOCK7 205503 sc-eQTL 4.46e-01 0.0619 0.0811 0.368 B L1
ENSG00000125703 ATG4C 109757 sc-eQTL 2.06e-01 -0.0714 0.0562 0.368 B L1
ENSG00000142856 ITGB3BP -699832 sc-eQTL 1.30e-01 0.136 0.0894 0.368 B L1
ENSG00000162607 USP1 457592 sc-eQTL 6.81e-01 0.0321 0.078 0.368 B L1
ENSG00000203965 EFCAB7 -629483 sc-eQTL 6.37e-02 0.17 0.0913 0.368 B L1
ENSG00000079739 PGM1 -699522 sc-eQTL 7.56e-01 0.0208 0.067 0.368 CD4T L1
ENSG00000088035 ALG6 -473686 sc-eQTL 2.92e-01 0.078 0.0738 0.368 CD4T L1
ENSG00000116641 DOCK7 205503 sc-eQTL 9.63e-01 0.00344 0.0749 0.368 CD4T L1
ENSG00000125703 ATG4C 109757 sc-eQTL 6.20e-01 0.03 0.0604 0.368 CD4T L1
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.03e-01 0.0105 0.0858 0.368 CD4T L1
ENSG00000162607 USP1 457592 sc-eQTL 2.50e-01 -0.0674 0.0585 0.368 CD4T L1
ENSG00000203965 EFCAB7 -629483 sc-eQTL 2.10e-01 -0.0965 0.0767 0.368 CD4T L1
ENSG00000079739 PGM1 -699522 sc-eQTL 6.10e-01 0.0378 0.0741 0.368 CD8T L1
ENSG00000088035 ALG6 -473686 sc-eQTL 5.14e-01 0.0534 0.0817 0.368 CD8T L1
ENSG00000116641 DOCK7 205503 sc-eQTL 4.35e-01 0.0647 0.0827 0.368 CD8T L1
ENSG00000125703 ATG4C 109757 sc-eQTL 1.75e-02 -0.186 0.0776 0.368 CD8T L1
ENSG00000142856 ITGB3BP -699832 sc-eQTL 8.51e-01 -0.0166 0.088 0.368 CD8T L1
ENSG00000162607 USP1 457592 sc-eQTL 9.44e-01 -0.00484 0.0686 0.368 CD8T L1
ENSG00000203965 EFCAB7 -629483 sc-eQTL 6.49e-01 -0.04 0.0877 0.368 CD8T L1
ENSG00000079739 PGM1 -699522 sc-eQTL 8.91e-01 -0.0113 0.0824 0.374 DC L1
ENSG00000088035 ALG6 -473686 sc-eQTL 6.43e-01 -0.0395 0.085 0.374 DC L1
ENSG00000116641 DOCK7 205503 sc-eQTL 9.69e-01 0.00345 0.0872 0.374 DC L1
ENSG00000125703 ATG4C 109757 sc-eQTL 8.14e-01 0.016 0.0682 0.374 DC L1
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.91e-01 0.00106 0.0954 0.374 DC L1
ENSG00000162607 USP1 457592 sc-eQTL 6.06e-01 -0.043 0.0832 0.374 DC L1
ENSG00000203965 EFCAB7 -629483 sc-eQTL 3.72e-01 0.0741 0.0828 0.374 DC L1
ENSG00000079739 PGM1 -699522 sc-eQTL 4.87e-01 -0.056 0.0803 0.368 Mono L1
ENSG00000088035 ALG6 -473686 sc-eQTL 6.67e-02 0.153 0.0833 0.368 Mono L1
ENSG00000116641 DOCK7 205503 sc-eQTL 8.29e-01 -0.0176 0.0812 0.368 Mono L1
ENSG00000125703 ATG4C 109757 sc-eQTL 7.43e-01 -0.018 0.0548 0.368 Mono L1
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.62e-01 -0.00409 0.0867 0.368 Mono L1
ENSG00000162607 USP1 457592 sc-eQTL 4.52e-01 0.0536 0.0711 0.368 Mono L1
ENSG00000240563 L1TD1 699040 sc-eQTL 9.54e-01 0.00384 0.0665 0.368 Mono L1
ENSG00000079739 PGM1 -699522 sc-eQTL 6.37e-01 -0.0328 0.0693 0.369 NK L1
ENSG00000088035 ALG6 -473686 sc-eQTL 7.53e-01 -0.0256 0.0813 0.369 NK L1
ENSG00000116641 DOCK7 205503 sc-eQTL 4.70e-01 -0.0484 0.0669 0.369 NK L1
ENSG00000125703 ATG4C 109757 sc-eQTL 5.26e-01 -0.0457 0.0719 0.369 NK L1
ENSG00000142856 ITGB3BP -699832 sc-eQTL 4.49e-01 0.0677 0.0893 0.369 NK L1
ENSG00000162607 USP1 457592 sc-eQTL 4.03e-01 -0.0668 0.0798 0.369 NK L1
ENSG00000203965 EFCAB7 -629483 sc-eQTL 4.09e-01 0.0801 0.0969 0.369 NK L1
ENSG00000079739 PGM1 -699522 sc-eQTL 2.05e-01 0.0993 0.0781 0.368 Other_T L1
ENSG00000088035 ALG6 -473686 sc-eQTL 4.58e-01 -0.0585 0.0787 0.368 Other_T L1
ENSG00000116641 DOCK7 205503 sc-eQTL 9.21e-01 -0.00799 0.0804 0.368 Other_T L1
ENSG00000125703 ATG4C 109757 sc-eQTL 7.70e-03 -0.184 0.0684 0.368 Other_T L1
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.17e-02 0.104 0.0613 0.368 Other_T L1
ENSG00000162607 USP1 457592 sc-eQTL 8.98e-01 -0.00688 0.0535 0.368 Other_T L1
ENSG00000203965 EFCAB7 -629483 sc-eQTL 8.46e-01 -0.0185 0.0952 0.368 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -699522 sc-eQTL 4.88e-01 0.0739 0.106 0.365 B_Activated L2
ENSG00000088035 ALG6 -473686 sc-eQTL 5.46e-01 0.0616 0.102 0.365 B_Activated L2
ENSG00000116641 DOCK7 205503 sc-eQTL 8.25e-01 0.0211 0.0949 0.365 B_Activated L2
ENSG00000125703 ATG4C 109757 sc-eQTL 9.82e-02 0.165 0.099 0.365 B_Activated L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 2.80e-02 0.213 0.0962 0.365 B_Activated L2
ENSG00000162607 USP1 457592 sc-eQTL 6.11e-01 0.0538 0.106 0.365 B_Activated L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 8.08e-01 0.0225 0.0923 0.365 B_Activated L2
ENSG00000079739 PGM1 -699522 sc-eQTL 7.81e-01 0.0267 0.0962 0.367 B_Intermediate L2
ENSG00000088035 ALG6 -473686 sc-eQTL 7.66e-01 -0.0291 0.0977 0.367 B_Intermediate L2
ENSG00000116641 DOCK7 205503 sc-eQTL 7.24e-01 0.033 0.0933 0.367 B_Intermediate L2
ENSG00000125703 ATG4C 109757 sc-eQTL 9.84e-01 0.0016 0.079 0.367 B_Intermediate L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 6.92e-01 -0.0373 0.0941 0.367 B_Intermediate L2
ENSG00000162607 USP1 457592 sc-eQTL 4.62e-01 -0.0691 0.0939 0.367 B_Intermediate L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 2.74e-01 0.102 0.093 0.367 B_Intermediate L2
ENSG00000079739 PGM1 -699522 sc-eQTL 9.66e-01 0.00399 0.0933 0.369 B_Memory L2
ENSG00000088035 ALG6 -473686 sc-eQTL 2.51e-01 0.109 0.0945 0.369 B_Memory L2
ENSG00000116641 DOCK7 205503 sc-eQTL 5.12e-01 -0.0584 0.0888 0.369 B_Memory L2
ENSG00000125703 ATG4C 109757 sc-eQTL 7.69e-01 0.0248 0.0845 0.369 B_Memory L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.43e-01 0.00695 0.0967 0.369 B_Memory L2
ENSG00000162607 USP1 457592 sc-eQTL 1.48e-01 -0.141 0.0971 0.369 B_Memory L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 5.69e-02 0.182 0.0952 0.369 B_Memory L2
ENSG00000079739 PGM1 -699522 sc-eQTL 5.00e-01 -0.0637 0.0943 0.368 B_Naive1 L2
ENSG00000088035 ALG6 -473686 sc-eQTL 2.27e-01 -0.114 0.0944 0.368 B_Naive1 L2
ENSG00000116641 DOCK7 205503 sc-eQTL 4.07e-01 0.0753 0.0906 0.368 B_Naive1 L2
ENSG00000125703 ATG4C 109757 sc-eQTL 3.87e-02 -0.144 0.0692 0.368 B_Naive1 L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 2.38e-01 0.11 0.0925 0.368 B_Naive1 L2
ENSG00000162607 USP1 457592 sc-eQTL 8.17e-02 0.142 0.081 0.368 B_Naive1 L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 5.30e-02 0.191 0.0981 0.368 B_Naive1 L2
ENSG00000079739 PGM1 -699522 sc-eQTL 5.66e-01 -0.0536 0.0932 0.367 B_Naive2 L2
ENSG00000088035 ALG6 -473686 sc-eQTL 6.37e-01 -0.046 0.0972 0.367 B_Naive2 L2
ENSG00000116641 DOCK7 205503 sc-eQTL 7.64e-01 0.0281 0.0935 0.367 B_Naive2 L2
ENSG00000125703 ATG4C 109757 sc-eQTL 6.77e-01 -0.0376 0.09 0.367 B_Naive2 L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 7.49e-01 0.0312 0.0976 0.367 B_Naive2 L2
ENSG00000162607 USP1 457592 sc-eQTL 5.25e-01 0.0591 0.0929 0.367 B_Naive2 L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 5.98e-01 -0.0513 0.0971 0.367 B_Naive2 L2
ENSG00000079739 PGM1 -699522 sc-eQTL 1.11e-02 0.238 0.093 0.375 CD4_CTL L2
ENSG00000088035 ALG6 -473686 sc-eQTL 6.84e-01 -0.0407 0.0999 0.375 CD4_CTL L2
ENSG00000116641 DOCK7 205503 sc-eQTL 2.45e-01 -0.101 0.0871 0.375 CD4_CTL L2
ENSG00000125703 ATG4C 109757 sc-eQTL 6.37e-01 -0.0426 0.0903 0.375 CD4_CTL L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.91e-01 0.00107 0.0967 0.375 CD4_CTL L2
ENSG00000162607 USP1 457592 sc-eQTL 7.11e-01 -0.0341 0.092 0.375 CD4_CTL L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 9.42e-02 0.153 0.0912 0.375 CD4_CTL L2
ENSG00000079739 PGM1 -699522 sc-eQTL 9.64e-01 0.00343 0.0752 0.368 CD4_Naive L2
ENSG00000088035 ALG6 -473686 sc-eQTL 6.42e-01 0.0381 0.0816 0.368 CD4_Naive L2
ENSG00000116641 DOCK7 205503 sc-eQTL 5.49e-01 0.0481 0.0802 0.368 CD4_Naive L2
ENSG00000125703 ATG4C 109757 sc-eQTL 8.07e-01 0.0174 0.0709 0.368 CD4_Naive L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 3.66e-01 0.0784 0.0865 0.368 CD4_Naive L2
ENSG00000162607 USP1 457592 sc-eQTL 2.62e-01 -0.0742 0.066 0.368 CD4_Naive L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 1.26e-01 -0.131 0.0856 0.368 CD4_Naive L2
ENSG00000079739 PGM1 -699522 sc-eQTL 8.34e-01 -0.0165 0.0786 0.368 CD4_TCM L2
ENSG00000088035 ALG6 -473686 sc-eQTL 1.14e-01 0.144 0.0908 0.368 CD4_TCM L2
ENSG00000116641 DOCK7 205503 sc-eQTL 6.42e-01 0.0377 0.0809 0.368 CD4_TCM L2
ENSG00000125703 ATG4C 109757 sc-eQTL 7.42e-01 0.026 0.0788 0.368 CD4_TCM L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 2.10e-01 -0.116 0.0925 0.368 CD4_TCM L2
ENSG00000162607 USP1 457592 sc-eQTL 4.14e-01 -0.0623 0.076 0.368 CD4_TCM L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 2.05e-01 -0.114 0.0896 0.368 CD4_TCM L2
ENSG00000079739 PGM1 -699522 sc-eQTL 7.00e-01 0.0358 0.0928 0.368 CD4_TEM L2
ENSG00000088035 ALG6 -473686 sc-eQTL 2.00e-01 0.119 0.093 0.368 CD4_TEM L2
ENSG00000116641 DOCK7 205503 sc-eQTL 6.95e-01 0.0358 0.0909 0.368 CD4_TEM L2
ENSG00000125703 ATG4C 109757 sc-eQTL 7.34e-01 0.0301 0.0883 0.368 CD4_TEM L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 8.85e-01 0.0132 0.0912 0.368 CD4_TEM L2
ENSG00000162607 USP1 457592 sc-eQTL 6.70e-01 -0.0369 0.0864 0.368 CD4_TEM L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 1.04e-01 0.153 0.0939 0.368 CD4_TEM L2
ENSG00000079739 PGM1 -699522 sc-eQTL 6.70e-01 -0.0364 0.0854 0.368 CD8_CTL L2
ENSG00000088035 ALG6 -473686 sc-eQTL 4.11e-01 0.0747 0.0907 0.368 CD8_CTL L2
ENSG00000116641 DOCK7 205503 sc-eQTL 3.80e-01 0.0758 0.0861 0.368 CD8_CTL L2
ENSG00000125703 ATG4C 109757 sc-eQTL 1.14e-02 -0.231 0.0904 0.368 CD8_CTL L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 3.39e-01 0.0913 0.0952 0.368 CD8_CTL L2
ENSG00000162607 USP1 457592 sc-eQTL 3.79e-01 -0.0753 0.0853 0.368 CD8_CTL L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 4.29e-01 -0.0773 0.0976 0.368 CD8_CTL L2
ENSG00000079739 PGM1 -699522 sc-eQTL 9.86e-01 -0.00155 0.0863 0.368 CD8_Naive L2
ENSG00000088035 ALG6 -473686 sc-eQTL 3.64e-01 0.0811 0.0891 0.368 CD8_Naive L2
ENSG00000116641 DOCK7 205503 sc-eQTL 2.41e-01 0.108 0.092 0.368 CD8_Naive L2
ENSG00000125703 ATG4C 109757 sc-eQTL 2.18e-02 -0.202 0.0875 0.368 CD8_Naive L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.01e-01 -0.0112 0.0898 0.368 CD8_Naive L2
ENSG00000162607 USP1 457592 sc-eQTL 8.72e-01 0.0122 0.0759 0.368 CD8_Naive L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 7.38e-01 -0.0283 0.0846 0.368 CD8_Naive L2
ENSG00000079739 PGM1 -699522 sc-eQTL 7.45e-02 0.17 0.0946 0.366 CD8_TCM L2
ENSG00000088035 ALG6 -473686 sc-eQTL 1.81e-01 -0.129 0.0961 0.366 CD8_TCM L2
ENSG00000116641 DOCK7 205503 sc-eQTL 6.98e-01 -0.0366 0.0942 0.366 CD8_TCM L2
ENSG00000125703 ATG4C 109757 sc-eQTL 3.26e-01 0.0947 0.0962 0.366 CD8_TCM L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 8.01e-01 -0.0237 0.0937 0.366 CD8_TCM L2
ENSG00000162607 USP1 457592 sc-eQTL 9.55e-01 0.00514 0.0901 0.366 CD8_TCM L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 4.24e-03 -0.27 0.0935 0.366 CD8_TCM L2
ENSG00000079739 PGM1 -699522 sc-eQTL 5.11e-01 -0.0653 0.0992 0.356 CD8_TEM L2
ENSG00000088035 ALG6 -473686 sc-eQTL 6.88e-02 -0.181 0.0988 0.356 CD8_TEM L2
ENSG00000116641 DOCK7 205503 sc-eQTL 3.65e-01 -0.0876 0.0964 0.356 CD8_TEM L2
ENSG00000125703 ATG4C 109757 sc-eQTL 1.80e-02 -0.218 0.0916 0.356 CD8_TEM L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 1.56e-01 -0.143 0.1 0.356 CD8_TEM L2
ENSG00000162607 USP1 457592 sc-eQTL 2.37e-01 0.113 0.0956 0.356 CD8_TEM L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 4.99e-01 0.066 0.0974 0.356 CD8_TEM L2
ENSG00000079739 PGM1 -699522 sc-eQTL 1.05e-01 0.146 0.09 0.368 MAIT L2
ENSG00000088035 ALG6 -473686 sc-eQTL 7.11e-01 -0.0333 0.0896 0.368 MAIT L2
ENSG00000116641 DOCK7 205503 sc-eQTL 9.79e-01 0.00223 0.0859 0.368 MAIT L2
ENSG00000125703 ATG4C 109757 sc-eQTL 1.09e-01 -0.145 0.09 0.368 MAIT L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 2.96e-01 0.0947 0.0905 0.368 MAIT L2
ENSG00000162607 USP1 457592 sc-eQTL 5.84e-01 0.0493 0.0899 0.368 MAIT L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 5.99e-01 -0.0491 0.0933 0.368 MAIT L2
ENSG00000079739 PGM1 -699522 sc-eQTL 7.34e-01 0.0305 0.0898 0.369 NK_CD56bright L2
ENSG00000088035 ALG6 -473686 sc-eQTL 5.23e-01 0.0589 0.092 0.369 NK_CD56bright L2
ENSG00000116641 DOCK7 205503 sc-eQTL 5.42e-02 0.153 0.0791 0.369 NK_CD56bright L2
ENSG00000125703 ATG4C 109757 sc-eQTL 2.54e-01 0.102 0.0889 0.369 NK_CD56bright L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 6.96e-01 0.0363 0.0928 0.369 NK_CD56bright L2
ENSG00000162607 USP1 457592 sc-eQTL 7.59e-01 0.0294 0.0957 0.369 NK_CD56bright L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 2.09e-01 0.115 0.0912 0.369 NK_CD56bright L2
ENSG00000079739 PGM1 -699522 sc-eQTL 4.69e-01 0.0519 0.0716 0.371 NK_CD56dim L2
ENSG00000088035 ALG6 -473686 sc-eQTL 7.54e-01 0.0285 0.0909 0.371 NK_CD56dim L2
ENSG00000116641 DOCK7 205503 sc-eQTL 3.26e-01 -0.0777 0.0789 0.371 NK_CD56dim L2
ENSG00000125703 ATG4C 109757 sc-eQTL 8.06e-01 0.0198 0.0804 0.371 NK_CD56dim L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 3.61e-01 0.0836 0.0913 0.371 NK_CD56dim L2
ENSG00000162607 USP1 457592 sc-eQTL 4.27e-01 -0.0705 0.0886 0.371 NK_CD56dim L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 7.89e-01 0.0265 0.0988 0.371 NK_CD56dim L2
ENSG00000079739 PGM1 -699522 sc-eQTL 6.14e-01 -0.0496 0.0982 0.365 NK_HLA L2
ENSG00000088035 ALG6 -473686 sc-eQTL 4.59e-01 0.0755 0.102 0.365 NK_HLA L2
ENSG00000116641 DOCK7 205503 sc-eQTL 8.61e-01 -0.0137 0.0779 0.365 NK_HLA L2
ENSG00000125703 ATG4C 109757 sc-eQTL 1.53e-02 -0.218 0.0892 0.365 NK_HLA L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 8.25e-01 -0.0211 0.0951 0.365 NK_HLA L2
ENSG00000162607 USP1 457592 sc-eQTL 4.73e-01 -0.0714 0.0994 0.365 NK_HLA L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 9.25e-01 -0.00855 0.0906 0.365 NK_HLA L2
ENSG00000079739 PGM1 -699522 sc-eQTL 4.75e-01 -0.0563 0.0787 0.371 NK_cytokine L2
ENSG00000088035 ALG6 -473686 sc-eQTL 2.57e-02 -0.198 0.088 0.371 NK_cytokine L2
ENSG00000116641 DOCK7 205503 sc-eQTL 8.22e-01 -0.0186 0.0825 0.371 NK_cytokine L2
ENSG00000125703 ATG4C 109757 sc-eQTL 4.56e-01 -0.063 0.0843 0.371 NK_cytokine L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 3.65e-01 0.0792 0.0872 0.371 NK_cytokine L2
ENSG00000162607 USP1 457592 sc-eQTL 8.72e-01 0.0148 0.0919 0.371 NK_cytokine L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 9.53e-01 -0.00553 0.0931 0.371 NK_cytokine L2
ENSG00000079739 PGM1 -699522 sc-eQTL 5.43e-01 0.0657 0.108 0.356 PB L2
ENSG00000088035 ALG6 -473686 sc-eQTL 9.31e-01 -0.0098 0.113 0.356 PB L2
ENSG00000116641 DOCK7 205503 sc-eQTL 3.71e-01 -0.108 0.121 0.356 PB L2
ENSG00000125703 ATG4C 109757 sc-eQTL 5.38e-01 -0.0651 0.105 0.356 PB L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 6.22e-01 0.052 0.105 0.356 PB L2
ENSG00000162607 USP1 457592 sc-eQTL 8.66e-01 -0.0177 0.105 0.356 PB L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 6.19e-01 -0.0576 0.116 0.356 PB L2
ENSG00000079739 PGM1 -699522 sc-eQTL 3.96e-01 -0.0732 0.086 0.365 Pro_T L2
ENSG00000088035 ALG6 -473686 sc-eQTL 4.56e-01 0.0653 0.0875 0.365 Pro_T L2
ENSG00000116641 DOCK7 205503 sc-eQTL 8.42e-01 -0.0175 0.0879 0.365 Pro_T L2
ENSG00000125703 ATG4C 109757 sc-eQTL 6.52e-01 -0.0347 0.0769 0.365 Pro_T L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 2.77e-02 0.169 0.0763 0.365 Pro_T L2
ENSG00000162607 USP1 457592 sc-eQTL 9.01e-01 0.00658 0.0531 0.365 Pro_T L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 7.30e-01 -0.031 0.0897 0.365 Pro_T L2
ENSG00000079739 PGM1 -699522 sc-eQTL 7.77e-01 -0.0256 0.0903 0.368 Treg L2
ENSG00000088035 ALG6 -473686 sc-eQTL 8.53e-01 0.0179 0.0966 0.368 Treg L2
ENSG00000116641 DOCK7 205503 sc-eQTL 9.66e-01 -0.00374 0.0887 0.368 Treg L2
ENSG00000125703 ATG4C 109757 sc-eQTL 6.21e-01 -0.0448 0.0905 0.368 Treg L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 3.53e-01 -0.0881 0.0946 0.368 Treg L2
ENSG00000162607 USP1 457592 sc-eQTL 6.43e-01 0.0425 0.0917 0.368 Treg L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 6.55e-01 0.0406 0.0907 0.368 Treg L2
ENSG00000079739 PGM1 -699522 sc-eQTL 3.53e-01 0.0823 0.0883 0.38 cDC L2
ENSG00000088035 ALG6 -473686 sc-eQTL 6.26e-02 0.167 0.0889 0.38 cDC L2
ENSG00000116641 DOCK7 205503 sc-eQTL 5.78e-01 -0.049 0.088 0.38 cDC L2
ENSG00000125703 ATG4C 109757 sc-eQTL 5.28e-01 0.0484 0.0764 0.38 cDC L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 3.53e-01 -0.0901 0.0968 0.38 cDC L2
ENSG00000162607 USP1 457592 sc-eQTL 6.78e-01 -0.0359 0.0863 0.38 cDC L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 7.56e-01 0.0242 0.0779 0.38 cDC L2
ENSG00000079739 PGM1 -699522 sc-eQTL 4.65e-01 -0.0612 0.0836 0.368 cMono_IL1B L2
ENSG00000088035 ALG6 -473686 sc-eQTL 4.32e-02 0.169 0.0829 0.368 cMono_IL1B L2
ENSG00000116641 DOCK7 205503 sc-eQTL 5.48e-01 -0.0531 0.0882 0.368 cMono_IL1B L2
ENSG00000125703 ATG4C 109757 sc-eQTL 7.98e-01 -0.016 0.0621 0.368 cMono_IL1B L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 6.41e-01 0.041 0.0879 0.368 cMono_IL1B L2
ENSG00000162607 USP1 457592 sc-eQTL 4.05e-01 0.0647 0.0775 0.368 cMono_IL1B L2
ENSG00000240563 L1TD1 699040 sc-eQTL 8.85e-01 -0.0113 0.0779 0.368 cMono_IL1B L2
ENSG00000079739 PGM1 -699522 sc-eQTL 3.15e-01 -0.093 0.0923 0.368 cMono_S100A L2
ENSG00000088035 ALG6 -473686 sc-eQTL 4.05e-01 0.0781 0.0936 0.368 cMono_S100A L2
ENSG00000116641 DOCK7 205503 sc-eQTL 3.22e-01 0.086 0.0867 0.368 cMono_S100A L2
ENSG00000125703 ATG4C 109757 sc-eQTL 7.37e-01 -0.0253 0.0752 0.368 cMono_S100A L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 6.86e-01 -0.0344 0.0849 0.368 cMono_S100A L2
ENSG00000162607 USP1 457592 sc-eQTL 7.51e-01 -0.0278 0.0874 0.368 cMono_S100A L2
ENSG00000240563 L1TD1 699040 sc-eQTL 1.59e-01 -0.102 0.0724 0.368 cMono_S100A L2
ENSG00000079739 PGM1 -699522 sc-eQTL 6.81e-01 0.0442 0.107 0.37 gdT L2
ENSG00000088035 ALG6 -473686 sc-eQTL 8.37e-01 0.0236 0.114 0.37 gdT L2
ENSG00000116641 DOCK7 205503 sc-eQTL 8.34e-01 0.0236 0.112 0.37 gdT L2
ENSG00000125703 ATG4C 109757 sc-eQTL 9.42e-01 0.00777 0.107 0.37 gdT L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 8.40e-02 0.196 0.113 0.37 gdT L2
ENSG00000162607 USP1 457592 sc-eQTL 6.06e-01 0.0556 0.108 0.37 gdT L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 9.61e-01 -0.00547 0.112 0.37 gdT L2
ENSG00000079739 PGM1 -699522 sc-eQTL 8.14e-01 -0.0219 0.0927 0.367 intMono L2
ENSG00000088035 ALG6 -473686 sc-eQTL 4.81e-01 -0.0609 0.0863 0.367 intMono L2
ENSG00000116641 DOCK7 205503 sc-eQTL 5.35e-01 -0.0548 0.0881 0.367 intMono L2
ENSG00000125703 ATG4C 109757 sc-eQTL 8.24e-01 0.0187 0.0842 0.367 intMono L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 4.13e-01 -0.0761 0.0926 0.367 intMono L2
ENSG00000162607 USP1 457592 sc-eQTL 3.26e-01 0.0926 0.0941 0.367 intMono L2
ENSG00000240563 L1TD1 699040 sc-eQTL 3.80e-01 0.061 0.0693 0.367 intMono L2
ENSG00000079739 PGM1 -699522 sc-eQTL 4.88e-01 0.0591 0.0851 0.369 ncMono L2
ENSG00000088035 ALG6 -473686 sc-eQTL 6.40e-01 -0.0438 0.0936 0.369 ncMono L2
ENSG00000116641 DOCK7 205503 sc-eQTL 5.04e-01 0.0617 0.092 0.369 ncMono L2
ENSG00000125703 ATG4C 109757 sc-eQTL 6.30e-01 -0.0415 0.086 0.369 ncMono L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 6.93e-01 -0.0356 0.09 0.369 ncMono L2
ENSG00000162607 USP1 457592 sc-eQTL 9.69e-01 0.00356 0.092 0.369 ncMono L2
ENSG00000240563 L1TD1 699040 sc-eQTL 3.00e-01 0.0676 0.0651 0.369 ncMono L2
ENSG00000079739 PGM1 -699522 sc-eQTL 6.49e-01 -0.0458 0.1 0.37 pDC L2
ENSG00000088035 ALG6 -473686 sc-eQTL 1.28e-02 -0.242 0.096 0.37 pDC L2
ENSG00000116641 DOCK7 205503 sc-eQTL 6.26e-01 0.0488 0.1 0.37 pDC L2
ENSG00000125703 ATG4C 109757 sc-eQTL 2.30e-01 -0.108 0.0893 0.37 pDC L2
ENSG00000142856 ITGB3BP -699832 sc-eQTL 1.27e-01 0.153 0.1 0.37 pDC L2
ENSG00000162607 USP1 457592 sc-eQTL 2.12e-01 -0.128 0.102 0.37 pDC L2
ENSG00000203965 EFCAB7 -629483 sc-eQTL 5.78e-01 0.0496 0.0891 0.37 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -699522 sc-eQTL 6.15e-01 0.0446 0.0884 0.368 B_Memory LOneK1K
ENSG00000088035 ALG6 -473686 sc-eQTL 5.84e-01 0.0537 0.0978 0.368 B_Memory LOneK1K
ENSG00000116641 DOCK7 205503 sc-eQTL 5.19e-01 -0.0547 0.0848 0.368 B_Memory LOneK1K
ENSG00000125703 ATG4C 109757 sc-eQTL 4.09e-01 0.0566 0.0685 0.368 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -699832 sc-eQTL 4.77e-01 0.0643 0.0901 0.368 B_Memory LOneK1K
ENSG00000162607 USP1 457592 sc-eQTL 3.20e-01 -0.0871 0.0874 0.368 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -629483 sc-eQTL 7.51e-02 0.167 0.0933 0.368 B_Memory LOneK1K
ENSG00000079739 PGM1 -699522 sc-eQTL 4.77e-01 -0.0649 0.0912 0.368 B_Naive LOneK1K
ENSG00000088035 ALG6 -473686 sc-eQTL 1.95e-01 -0.122 0.0936 0.368 B_Naive LOneK1K
ENSG00000116641 DOCK7 205503 sc-eQTL 3.13e-01 0.0886 0.0876 0.368 B_Naive LOneK1K
ENSG00000125703 ATG4C 109757 sc-eQTL 1.44e-02 -0.163 0.066 0.368 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -699832 sc-eQTL 1.64e-01 0.132 0.0942 0.368 B_Naive LOneK1K
ENSG00000162607 USP1 457592 sc-eQTL 1.53e-01 0.116 0.081 0.368 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -629483 sc-eQTL 2.24e-01 0.116 0.0948 0.368 B_Naive LOneK1K
ENSG00000079739 PGM1 -699522 sc-eQTL 3.93e-01 -0.0728 0.0851 0.368 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -473686 sc-eQTL 5.60e-02 0.157 0.0818 0.368 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 205503 sc-eQTL 9.32e-01 -0.00714 0.0831 0.368 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 109757 sc-eQTL 5.99e-01 -0.0302 0.0574 0.368 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -699832 sc-eQTL 9.42e-01 -0.00616 0.085 0.368 CD14_Mono LOneK1K
ENSG00000162607 USP1 457592 sc-eQTL 5.46e-01 0.0439 0.0725 0.368 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 699040 sc-eQTL 4.39e-01 -0.061 0.0786 0.368 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -699522 sc-eQTL 6.65e-01 0.0353 0.0815 0.369 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -473686 sc-eQTL 6.53e-01 -0.0417 0.0926 0.369 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 205503 sc-eQTL 9.57e-01 0.00499 0.0916 0.369 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 109757 sc-eQTL 7.15e-01 -0.0286 0.0781 0.369 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -699832 sc-eQTL 3.47e-01 -0.0853 0.0905 0.369 CD16_Mono LOneK1K
ENSG00000162607 USP1 457592 sc-eQTL 2.12e-01 0.106 0.0849 0.369 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 699040 sc-eQTL 2.54e-01 0.0663 0.058 0.369 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -699522 sc-eQTL 7.51e-01 -0.0223 0.0703 0.371 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -473686 sc-eQTL 5.87e-01 -0.0459 0.0844 0.371 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 205503 sc-eQTL 3.08e-01 -0.0771 0.0755 0.371 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 109757 sc-eQTL 5.32e-01 -0.0472 0.0755 0.371 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -699832 sc-eQTL 4.62e-01 0.0658 0.0894 0.371 NK_CD56dim LOneK1K
ENSG00000162607 USP1 457592 sc-eQTL 6.37e-01 -0.0384 0.0812 0.371 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -629483 sc-eQTL 7.25e-01 0.0348 0.0989 0.371 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 205521 eQTL 6.52e-06 -0.101 0.0223 0.0 0.0 0.353
ENSG00000125703 ATG4C 109757 eQTL 0.000254 -0.0624 0.017 0.0 0.0 0.353
ENSG00000142856 ITGB3BP -699832 eQTL 0.00396 0.0859 0.0297 0.0 0.0 0.353
ENSG00000162607 USP1 457592 eQTL 0.000969 -0.0432 0.013 0.0 0.0 0.353

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 205521 1.96e-06 2.12e-06 2.59e-07 1.35e-06 4.74e-07 6.38e-07 1.3e-06 5.98e-07 1.76e-06 7.98e-07 1.79e-06 1.32e-06 2.79e-06 6.67e-07 4.8e-07 1.22e-06 1.15e-06 1.36e-06 6.7e-07 9.54e-07 6.7e-07 1.94e-06 1.71e-06 1.04e-06 2.65e-06 1.17e-06 1.1e-06 1.12e-06 1.69e-06 1.68e-06 7.32e-07 2.78e-07 4.47e-07 1.01e-06 8.75e-07 7.08e-07 7.5e-07 3.52e-07 7.04e-07 3.47e-07 1.67e-07 2.46e-06 3.77e-07 1.74e-07 3.22e-07 3.19e-07 4.3e-07 2.49e-07 2.1e-07
ENSG00000125703 ATG4C 109757 4.74e-06 4.79e-06 7.11e-07 2.63e-06 1.61e-06 1.57e-06 4.29e-06 1.05e-06 5.12e-06 2.41e-06 5.18e-06 3.31e-06 7.1e-06 2.34e-06 1.33e-06 3.81e-06 1.92e-06 3.49e-06 1.57e-06 1.39e-06 3.01e-06 4.72e-06 4.58e-06 1.76e-06 5.95e-06 1.96e-06 2.43e-06 1.89e-06 4.41e-06 4.27e-06 2.7e-06 4.02e-07 7.37e-07 1.82e-06 2.24e-06 1.17e-06 1.07e-06 4.39e-07 8.38e-07 5.91e-07 8.27e-07 5.69e-06 3.65e-07 1.64e-07 7.32e-07 1.1e-06 1.13e-06 6.6e-07 5.12e-07
ENSG00000142856 ITGB3BP -699832 3.1e-07 1.51e-07 6.42e-08 2.2e-07 1.07e-07 8.63e-08 2.16e-07 6.12e-08 1.75e-07 9.72e-08 1.69e-07 1.31e-07 2.24e-07 8e-08 5.97e-08 9.11e-08 4.35e-08 1.91e-07 7.29e-08 6.16e-08 1.18e-07 1.65e-07 1.64e-07 4.07e-08 2.09e-07 1.39e-07 1.23e-07 1.17e-07 1.37e-07 1.29e-07 1.21e-07 4.4e-08 3.74e-08 9.58e-08 3.36e-08 3.11e-08 4.49e-08 8.57e-08 6.62e-08 6.31e-08 5.1e-08 1.55e-07 4.17e-08 7.66e-09 3.61e-08 8.31e-09 7.83e-08 2.02e-09 4.67e-08