logo

Genes within 1Mb (chr1:62847231:A:AAAAC):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -746180 sc-eQTL 3.95e-01 0.066 0.0774 0.592 B L1
ENSG00000088035 ALG6 -520344 sc-eQTL 9.45e-01 -0.00554 0.0804 0.592 B L1
ENSG00000116641 DOCK7 158845 sc-eQTL 6.80e-01 -0.0332 0.0803 0.592 B L1
ENSG00000125703 ATG4C 63099 sc-eQTL 2.30e-01 0.067 0.0557 0.592 B L1
ENSG00000142856 ITGB3BP -746490 sc-eQTL 2.44e-01 -0.103 0.0886 0.592 B L1
ENSG00000162607 USP1 410934 sc-eQTL 9.14e-01 0.00839 0.0772 0.592 B L1
ENSG00000203965 EFCAB7 -676141 sc-eQTL 8.56e-02 -0.156 0.0904 0.592 B L1
ENSG00000079739 PGM1 -746180 sc-eQTL 9.31e-01 0.00576 0.0664 0.592 CD4T L1
ENSG00000088035 ALG6 -520344 sc-eQTL 6.93e-01 -0.029 0.0733 0.592 CD4T L1
ENSG00000116641 DOCK7 158845 sc-eQTL 6.28e-01 0.036 0.0742 0.592 CD4T L1
ENSG00000125703 ATG4C 63099 sc-eQTL 8.67e-01 0.01 0.0599 0.592 CD4T L1
ENSG00000142856 ITGB3BP -746490 sc-eQTL 3.88e-01 0.0734 0.0849 0.592 CD4T L1
ENSG00000162607 USP1 410934 sc-eQTL 7.63e-01 0.0175 0.0581 0.592 CD4T L1
ENSG00000203965 EFCAB7 -676141 sc-eQTL 9.68e-02 0.127 0.0759 0.592 CD4T L1
ENSG00000079739 PGM1 -746180 sc-eQTL 7.45e-01 0.024 0.0737 0.592 CD8T L1
ENSG00000088035 ALG6 -520344 sc-eQTL 6.94e-01 -0.0321 0.0813 0.592 CD8T L1
ENSG00000116641 DOCK7 158845 sc-eQTL 7.98e-01 -0.0211 0.0824 0.592 CD8T L1
ENSG00000125703 ATG4C 63099 sc-eQTL 3.49e-02 0.164 0.0774 0.592 CD8T L1
ENSG00000142856 ITGB3BP -746490 sc-eQTL 7.14e-01 0.032 0.0875 0.592 CD8T L1
ENSG00000162607 USP1 410934 sc-eQTL 4.18e-01 -0.0552 0.0681 0.592 CD8T L1
ENSG00000203965 EFCAB7 -676141 sc-eQTL 4.06e-01 0.0725 0.0871 0.592 CD8T L1
ENSG00000079739 PGM1 -746180 sc-eQTL 3.70e-01 -0.0733 0.0816 0.59 DC L1
ENSG00000088035 ALG6 -520344 sc-eQTL 8.38e-01 0.0173 0.0844 0.59 DC L1
ENSG00000116641 DOCK7 158845 sc-eQTL 9.93e-01 -0.000788 0.0865 0.59 DC L1
ENSG00000125703 ATG4C 63099 sc-eQTL 8.27e-01 -0.0149 0.0677 0.59 DC L1
ENSG00000142856 ITGB3BP -746490 sc-eQTL 7.32e-01 -0.0325 0.0946 0.59 DC L1
ENSG00000162607 USP1 410934 sc-eQTL 5.73e-01 0.0466 0.0825 0.59 DC L1
ENSG00000203965 EFCAB7 -676141 sc-eQTL 3.80e-01 -0.0723 0.0822 0.59 DC L1
ENSG00000079739 PGM1 -746180 sc-eQTL 3.05e-01 0.082 0.0798 0.592 Mono L1
ENSG00000088035 ALG6 -520344 sc-eQTL 9.91e-02 -0.137 0.0829 0.592 Mono L1
ENSG00000116641 DOCK7 158845 sc-eQTL 4.03e-01 0.0675 0.0806 0.592 Mono L1
ENSG00000125703 ATG4C 63099 sc-eQTL 1.93e-01 0.0709 0.0543 0.592 Mono L1
ENSG00000142856 ITGB3BP -746490 sc-eQTL 5.13e-01 0.0565 0.0861 0.592 Mono L1
ENSG00000162607 USP1 410934 sc-eQTL 5.05e-01 -0.0472 0.0707 0.592 Mono L1
ENSG00000240563 L1TD1 652382 sc-eQTL 5.33e-01 -0.0412 0.066 0.592 Mono L1
ENSG00000079739 PGM1 -746180 sc-eQTL 2.90e-01 0.0731 0.0689 0.592 NK L1
ENSG00000088035 ALG6 -520344 sc-eQTL 9.50e-01 -0.00513 0.081 0.592 NK L1
ENSG00000116641 DOCK7 158845 sc-eQTL 8.53e-02 0.115 0.0663 0.592 NK L1
ENSG00000125703 ATG4C 63099 sc-eQTL 8.18e-01 -0.0165 0.0717 0.592 NK L1
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.68e-01 0.0149 0.0891 0.592 NK L1
ENSG00000162607 USP1 410934 sc-eQTL 7.00e-01 -0.0307 0.0796 0.592 NK L1
ENSG00000203965 EFCAB7 -676141 sc-eQTL 9.77e-01 0.00283 0.0967 0.592 NK L1
ENSG00000079739 PGM1 -746180 sc-eQTL 3.54e-01 -0.0722 0.0777 0.592 Other_T L1
ENSG00000088035 ALG6 -520344 sc-eQTL 2.32e-01 0.0935 0.078 0.592 Other_T L1
ENSG00000116641 DOCK7 158845 sc-eQTL 9.95e-01 -0.000524 0.0799 0.592 Other_T L1
ENSG00000125703 ATG4C 63099 sc-eQTL 1.97e-03 0.212 0.0676 0.592 Other_T L1
ENSG00000142856 ITGB3BP -746490 sc-eQTL 2.52e-01 -0.0703 0.0611 0.592 Other_T L1
ENSG00000162607 USP1 410934 sc-eQTL 9.65e-01 -0.00232 0.0532 0.592 Other_T L1
ENSG00000203965 EFCAB7 -676141 sc-eQTL 2.57e-01 0.107 0.0943 0.592 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -746180 sc-eQTL 5.71e-01 -0.0608 0.107 0.589 B_Activated L2
ENSG00000088035 ALG6 -520344 sc-eQTL 3.89e-01 -0.0887 0.103 0.589 B_Activated L2
ENSG00000116641 DOCK7 158845 sc-eQTL 8.49e-01 0.0182 0.0957 0.589 B_Activated L2
ENSG00000125703 ATG4C 63099 sc-eQTL 5.29e-01 -0.0635 0.101 0.589 B_Activated L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 7.84e-02 -0.173 0.0975 0.589 B_Activated L2
ENSG00000162607 USP1 410934 sc-eQTL 9.11e-01 -0.0119 0.107 0.589 B_Activated L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 6.34e-01 0.0444 0.0931 0.589 B_Activated L2
ENSG00000079739 PGM1 -746180 sc-eQTL 5.81e-01 -0.0523 0.0947 0.592 B_Intermediate L2
ENSG00000088035 ALG6 -520344 sc-eQTL 6.99e-01 -0.0372 0.0962 0.592 B_Intermediate L2
ENSG00000116641 DOCK7 158845 sc-eQTL 4.83e-01 0.0646 0.0918 0.592 B_Intermediate L2
ENSG00000125703 ATG4C 63099 sc-eQTL 6.79e-01 -0.0323 0.0778 0.592 B_Intermediate L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.94e-01 0.0124 0.0927 0.592 B_Intermediate L2
ENSG00000162607 USP1 410934 sc-eQTL 5.06e-01 0.0616 0.0924 0.592 B_Intermediate L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 1.06e-01 -0.148 0.0912 0.592 B_Intermediate L2
ENSG00000079739 PGM1 -746180 sc-eQTL 9.93e-01 0.000815 0.0921 0.591 B_Memory L2
ENSG00000088035 ALG6 -520344 sc-eQTL 4.87e-01 -0.0652 0.0936 0.591 B_Memory L2
ENSG00000116641 DOCK7 158845 sc-eQTL 7.47e-01 0.0284 0.0878 0.591 B_Memory L2
ENSG00000125703 ATG4C 63099 sc-eQTL 6.90e-01 -0.0333 0.0835 0.591 B_Memory L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.36e-01 -0.0198 0.0956 0.591 B_Memory L2
ENSG00000162607 USP1 410934 sc-eQTL 1.94e-01 0.125 0.096 0.591 B_Memory L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 7.95e-01 -0.0247 0.0948 0.591 B_Memory L2
ENSG00000079739 PGM1 -746180 sc-eQTL 5.62e-01 0.0541 0.0932 0.592 B_Naive1 L2
ENSG00000088035 ALG6 -520344 sc-eQTL 2.46e-01 0.109 0.0934 0.592 B_Naive1 L2
ENSG00000116641 DOCK7 158845 sc-eQTL 1.74e-01 -0.122 0.0893 0.592 B_Naive1 L2
ENSG00000125703 ATG4C 63099 sc-eQTL 2.54e-02 0.154 0.0683 0.592 B_Naive1 L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 3.96e-01 -0.0778 0.0916 0.592 B_Naive1 L2
ENSG00000162607 USP1 410934 sc-eQTL 1.20e-01 -0.125 0.0802 0.592 B_Naive1 L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 1.18e-01 -0.153 0.0973 0.592 B_Naive1 L2
ENSG00000079739 PGM1 -746180 sc-eQTL 3.20e-01 0.0921 0.0924 0.592 B_Naive2 L2
ENSG00000088035 ALG6 -520344 sc-eQTL 3.53e-01 -0.0897 0.0963 0.592 B_Naive2 L2
ENSG00000116641 DOCK7 158845 sc-eQTL 9.77e-01 0.00267 0.0928 0.592 B_Naive2 L2
ENSG00000125703 ATG4C 63099 sc-eQTL 6.40e-01 0.0418 0.0893 0.592 B_Naive2 L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 9.87e-01 -0.00164 0.0969 0.592 B_Naive2 L2
ENSG00000162607 USP1 410934 sc-eQTL 9.07e-01 0.0108 0.0922 0.592 B_Naive2 L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 6.34e-01 -0.0459 0.0964 0.592 B_Naive2 L2
ENSG00000079739 PGM1 -746180 sc-eQTL 6.70e-02 -0.168 0.0915 0.586 CD4_CTL L2
ENSG00000088035 ALG6 -520344 sc-eQTL 7.08e-01 0.0366 0.0975 0.586 CD4_CTL L2
ENSG00000116641 DOCK7 158845 sc-eQTL 1.80e-01 0.114 0.0849 0.586 CD4_CTL L2
ENSG00000125703 ATG4C 63099 sc-eQTL 8.25e-01 0.0196 0.0882 0.586 CD4_CTL L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 1.11e-01 0.15 0.0937 0.586 CD4_CTL L2
ENSG00000162607 USP1 410934 sc-eQTL 9.36e-01 -0.00718 0.0898 0.586 CD4_CTL L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 3.26e-01 -0.0881 0.0894 0.586 CD4_CTL L2
ENSG00000079739 PGM1 -746180 sc-eQTL 5.65e-01 0.0428 0.0744 0.592 CD4_Naive L2
ENSG00000088035 ALG6 -520344 sc-eQTL 8.40e-01 0.0164 0.0809 0.592 CD4_Naive L2
ENSG00000116641 DOCK7 158845 sc-eQTL 7.90e-01 -0.0212 0.0795 0.592 CD4_Naive L2
ENSG00000125703 ATG4C 63099 sc-eQTL 9.74e-01 0.00226 0.0703 0.592 CD4_Naive L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 9.97e-01 0.000319 0.0859 0.592 CD4_Naive L2
ENSG00000162607 USP1 410934 sc-eQTL 5.43e-01 0.0399 0.0655 0.592 CD4_Naive L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 1.16e-02 0.214 0.084 0.592 CD4_Naive L2
ENSG00000079739 PGM1 -746180 sc-eQTL 9.48e-01 -0.00513 0.0779 0.592 CD4_TCM L2
ENSG00000088035 ALG6 -520344 sc-eQTL 1.38e-01 -0.134 0.09 0.592 CD4_TCM L2
ENSG00000116641 DOCK7 158845 sc-eQTL 9.21e-01 0.00792 0.0802 0.592 CD4_TCM L2
ENSG00000125703 ATG4C 63099 sc-eQTL 6.20e-01 0.0387 0.078 0.592 CD4_TCM L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 2.20e-01 0.113 0.0917 0.592 CD4_TCM L2
ENSG00000162607 USP1 410934 sc-eQTL 9.09e-01 -0.0086 0.0755 0.592 CD4_TCM L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 3.94e-01 0.076 0.0889 0.592 CD4_TCM L2
ENSG00000079739 PGM1 -746180 sc-eQTL 9.18e-01 0.00949 0.0922 0.592 CD4_TEM L2
ENSG00000088035 ALG6 -520344 sc-eQTL 4.08e-01 -0.0767 0.0925 0.592 CD4_TEM L2
ENSG00000116641 DOCK7 158845 sc-eQTL 8.59e-01 -0.0161 0.0903 0.592 CD4_TEM L2
ENSG00000125703 ATG4C 63099 sc-eQTL 9.30e-01 0.00776 0.0878 0.592 CD4_TEM L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 5.41e-01 0.0555 0.0905 0.592 CD4_TEM L2
ENSG00000162607 USP1 410934 sc-eQTL 4.43e-01 0.0658 0.0857 0.592 CD4_TEM L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 8.26e-02 -0.163 0.0932 0.592 CD4_TEM L2
ENSG00000079739 PGM1 -746180 sc-eQTL 1.58e-01 0.119 0.0841 0.592 CD8_CTL L2
ENSG00000088035 ALG6 -520344 sc-eQTL 3.39e-01 -0.0859 0.0896 0.592 CD8_CTL L2
ENSG00000116641 DOCK7 158845 sc-eQTL 3.55e-01 0.0789 0.0851 0.592 CD8_CTL L2
ENSG00000125703 ATG4C 63099 sc-eQTL 4.70e-02 0.18 0.0899 0.592 CD8_CTL L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.28e-01 -0.0206 0.0943 0.592 CD8_CTL L2
ENSG00000162607 USP1 410934 sc-eQTL 8.38e-01 0.0173 0.0845 0.592 CD8_CTL L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 2.24e-01 0.117 0.0963 0.592 CD8_CTL L2
ENSG00000079739 PGM1 -746180 sc-eQTL 6.92e-01 0.034 0.0855 0.592 CD8_Naive L2
ENSG00000088035 ALG6 -520344 sc-eQTL 4.18e-01 -0.0717 0.0884 0.592 CD8_Naive L2
ENSG00000116641 DOCK7 158845 sc-eQTL 4.81e-02 -0.18 0.0906 0.592 CD8_Naive L2
ENSG00000125703 ATG4C 63099 sc-eQTL 1.36e-01 0.131 0.0874 0.592 CD8_Naive L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.76e-01 0.0139 0.0889 0.592 CD8_Naive L2
ENSG00000162607 USP1 410934 sc-eQTL 7.58e-01 -0.0232 0.0752 0.592 CD8_Naive L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 5.04e-01 0.0561 0.0838 0.592 CD8_Naive L2
ENSG00000079739 PGM1 -746180 sc-eQTL 6.39e-03 -0.256 0.0928 0.588 CD8_TCM L2
ENSG00000088035 ALG6 -520344 sc-eQTL 6.93e-02 0.174 0.095 0.588 CD8_TCM L2
ENSG00000116641 DOCK7 158845 sc-eQTL 6.95e-01 0.0366 0.0935 0.588 CD8_TCM L2
ENSG00000125703 ATG4C 63099 sc-eQTL 8.47e-01 -0.0185 0.0956 0.588 CD8_TCM L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 5.06e-01 0.0619 0.0928 0.588 CD8_TCM L2
ENSG00000162607 USP1 410934 sc-eQTL 9.14e-01 -0.00966 0.0894 0.588 CD8_TCM L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 3.80e-03 0.272 0.0927 0.588 CD8_TCM L2
ENSG00000079739 PGM1 -746180 sc-eQTL 4.20e-01 0.0792 0.0981 0.6 CD8_TEM L2
ENSG00000088035 ALG6 -520344 sc-eQTL 3.54e-02 0.206 0.0975 0.6 CD8_TEM L2
ENSG00000116641 DOCK7 158845 sc-eQTL 9.72e-01 0.00337 0.0956 0.6 CD8_TEM L2
ENSG00000125703 ATG4C 63099 sc-eQTL 7.02e-02 0.166 0.0911 0.6 CD8_TEM L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 5.58e-01 0.0583 0.0994 0.6 CD8_TEM L2
ENSG00000162607 USP1 410934 sc-eQTL 2.01e-01 -0.121 0.0945 0.6 CD8_TEM L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 9.28e-01 -0.00867 0.0964 0.6 CD8_TEM L2
ENSG00000079739 PGM1 -746180 sc-eQTL 1.70e-01 -0.122 0.0887 0.591 MAIT L2
ENSG00000088035 ALG6 -520344 sc-eQTL 9.24e-01 0.00844 0.0882 0.591 MAIT L2
ENSG00000116641 DOCK7 158845 sc-eQTL 5.99e-01 -0.0444 0.0844 0.591 MAIT L2
ENSG00000125703 ATG4C 63099 sc-eQTL 8.98e-03 0.231 0.0876 0.591 MAIT L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 6.03e-01 -0.0465 0.0892 0.591 MAIT L2
ENSG00000162607 USP1 410934 sc-eQTL 5.63e-01 0.0512 0.0885 0.591 MAIT L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 2.64e-01 0.103 0.0916 0.591 MAIT L2
ENSG00000079739 PGM1 -746180 sc-eQTL 6.54e-01 -0.0404 0.0901 0.589 NK_CD56bright L2
ENSG00000088035 ALG6 -520344 sc-eQTL 9.84e-01 0.00186 0.0924 0.589 NK_CD56bright L2
ENSG00000116641 DOCK7 158845 sc-eQTL 3.20e-02 -0.171 0.0792 0.589 NK_CD56bright L2
ENSG00000125703 ATG4C 63099 sc-eQTL 1.69e-01 -0.123 0.089 0.589 NK_CD56bright L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.95e-01 0.0123 0.0931 0.589 NK_CD56bright L2
ENSG00000162607 USP1 410934 sc-eQTL 6.38e-01 0.0452 0.096 0.589 NK_CD56bright L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 1.61e-01 -0.129 0.0914 0.589 NK_CD56bright L2
ENSG00000079739 PGM1 -746180 sc-eQTL 5.51e-01 -0.0428 0.0717 0.591 NK_CD56dim L2
ENSG00000088035 ALG6 -520344 sc-eQTL 6.71e-01 -0.0387 0.0909 0.591 NK_CD56dim L2
ENSG00000116641 DOCK7 158845 sc-eQTL 9.55e-02 0.132 0.0786 0.591 NK_CD56dim L2
ENSG00000125703 ATG4C 63099 sc-eQTL 6.44e-01 -0.0372 0.0804 0.591 NK_CD56dim L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 9.17e-01 -0.00953 0.0915 0.591 NK_CD56dim L2
ENSG00000162607 USP1 410934 sc-eQTL 8.54e-01 -0.0163 0.0887 0.591 NK_CD56dim L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 7.40e-01 0.0329 0.0988 0.591 NK_CD56dim L2
ENSG00000079739 PGM1 -746180 sc-eQTL 2.28e-01 0.116 0.0958 0.596 NK_HLA L2
ENSG00000088035 ALG6 -520344 sc-eQTL 2.92e-01 -0.105 0.0994 0.596 NK_HLA L2
ENSG00000116641 DOCK7 158845 sc-eQTL 5.88e-01 0.0414 0.0762 0.596 NK_HLA L2
ENSG00000125703 ATG4C 63099 sc-eQTL 1.21e-01 0.137 0.0881 0.596 NK_HLA L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.89e-01 0.013 0.0931 0.596 NK_HLA L2
ENSG00000162607 USP1 410934 sc-eQTL 9.03e-01 0.0119 0.0974 0.596 NK_HLA L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 3.22e-01 0.0877 0.0884 0.596 NK_HLA L2
ENSG00000079739 PGM1 -746180 sc-eQTL 1.53e-01 0.111 0.0773 0.591 NK_cytokine L2
ENSG00000088035 ALG6 -520344 sc-eQTL 6.01e-02 0.165 0.087 0.591 NK_cytokine L2
ENSG00000116641 DOCK7 158845 sc-eQTL 5.52e-02 0.155 0.0806 0.591 NK_cytokine L2
ENSG00000125703 ATG4C 63099 sc-eQTL 7.29e-01 0.0289 0.0832 0.591 NK_cytokine L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.05e-01 -0.0213 0.0862 0.591 NK_cytokine L2
ENSG00000162607 USP1 410934 sc-eQTL 5.02e-01 -0.0609 0.0905 0.591 NK_cytokine L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 3.29e-01 0.0897 0.0916 0.591 NK_cytokine L2
ENSG00000079739 PGM1 -746180 sc-eQTL 6.37e-01 0.0492 0.104 0.593 PB L2
ENSG00000088035 ALG6 -520344 sc-eQTL 7.74e-01 -0.0314 0.109 0.593 PB L2
ENSG00000116641 DOCK7 158845 sc-eQTL 8.57e-01 -0.0211 0.117 0.593 PB L2
ENSG00000125703 ATG4C 63099 sc-eQTL 4.58e-01 0.0757 0.102 0.593 PB L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 7.66e-01 -0.0303 0.102 0.593 PB L2
ENSG00000162607 USP1 410934 sc-eQTL 7.94e-01 0.0265 0.101 0.593 PB L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 5.52e-01 0.0665 0.111 0.593 PB L2
ENSG00000079739 PGM1 -746180 sc-eQTL 8.23e-01 0.0189 0.0841 0.591 Pro_T L2
ENSG00000088035 ALG6 -520344 sc-eQTL 6.76e-01 0.0358 0.0855 0.591 Pro_T L2
ENSG00000116641 DOCK7 158845 sc-eQTL 2.64e-01 0.0959 0.0856 0.591 Pro_T L2
ENSG00000125703 ATG4C 63099 sc-eQTL 5.53e-01 0.0446 0.0751 0.591 Pro_T L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 2.32e-02 -0.17 0.0744 0.591 Pro_T L2
ENSG00000162607 USP1 410934 sc-eQTL 7.80e-01 0.0145 0.0518 0.591 Pro_T L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 1.03e-01 0.143 0.087 0.591 Pro_T L2
ENSG00000079739 PGM1 -746180 sc-eQTL 7.23e-01 0.0318 0.0895 0.592 Treg L2
ENSG00000088035 ALG6 -520344 sc-eQTL 9.26e-01 0.00888 0.0957 0.592 Treg L2
ENSG00000116641 DOCK7 158845 sc-eQTL 7.36e-01 0.0297 0.0879 0.592 Treg L2
ENSG00000125703 ATG4C 63099 sc-eQTL 7.56e-01 0.0279 0.0898 0.592 Treg L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 3.01e-01 0.0971 0.0937 0.592 Treg L2
ENSG00000162607 USP1 410934 sc-eQTL 6.51e-01 -0.0412 0.0909 0.592 Treg L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 9.25e-01 0.00852 0.0899 0.592 Treg L2
ENSG00000079739 PGM1 -746180 sc-eQTL 4.41e-01 -0.0677 0.0877 0.588 cDC L2
ENSG00000088035 ALG6 -520344 sc-eQTL 4.77e-02 -0.176 0.0882 0.588 cDC L2
ENSG00000116641 DOCK7 158845 sc-eQTL 5.25e-01 0.0557 0.0873 0.588 cDC L2
ENSG00000125703 ATG4C 63099 sc-eQTL 4.37e-01 -0.0591 0.0758 0.588 cDC L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 7.78e-01 0.0272 0.0962 0.588 cDC L2
ENSG00000162607 USP1 410934 sc-eQTL 5.91e-01 0.046 0.0856 0.588 cDC L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 9.58e-01 -0.00404 0.0773 0.588 cDC L2
ENSG00000079739 PGM1 -746180 sc-eQTL 2.11e-01 0.103 0.0824 0.592 cMono_IL1B L2
ENSG00000088035 ALG6 -520344 sc-eQTL 5.86e-02 -0.156 0.0821 0.592 cMono_IL1B L2
ENSG00000116641 DOCK7 158845 sc-eQTL 6.41e-01 0.0407 0.0873 0.592 cMono_IL1B L2
ENSG00000125703 ATG4C 63099 sc-eQTL 3.84e-01 0.0535 0.0613 0.592 cMono_IL1B L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 5.73e-01 0.0491 0.0869 0.592 cMono_IL1B L2
ENSG00000162607 USP1 410934 sc-eQTL 6.24e-01 -0.0376 0.0767 0.592 cMono_IL1B L2
ENSG00000240563 L1TD1 652382 sc-eQTL 8.69e-01 -0.0127 0.0771 0.592 cMono_IL1B L2
ENSG00000079739 PGM1 -746180 sc-eQTL 4.38e-01 0.071 0.0914 0.592 cMono_S100A L2
ENSG00000088035 ALG6 -520344 sc-eQTL 2.76e-01 -0.101 0.0925 0.592 cMono_S100A L2
ENSG00000116641 DOCK7 158845 sc-eQTL 6.80e-01 0.0355 0.086 0.592 cMono_S100A L2
ENSG00000125703 ATG4C 63099 sc-eQTL 5.22e-01 0.0478 0.0744 0.592 cMono_S100A L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 3.63e-01 0.0764 0.0839 0.592 cMono_S100A L2
ENSG00000162607 USP1 410934 sc-eQTL 6.60e-01 -0.0381 0.0864 0.592 cMono_S100A L2
ENSG00000240563 L1TD1 652382 sc-eQTL 6.18e-01 0.0359 0.0719 0.592 cMono_S100A L2
ENSG00000079739 PGM1 -746180 sc-eQTL 4.17e-01 -0.0859 0.106 0.591 gdT L2
ENSG00000088035 ALG6 -520344 sc-eQTL 4.21e-01 -0.0908 0.112 0.591 gdT L2
ENSG00000116641 DOCK7 158845 sc-eQTL 4.80e-01 0.0781 0.11 0.591 gdT L2
ENSG00000125703 ATG4C 63099 sc-eQTL 3.88e-01 -0.0913 0.105 0.591 gdT L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 3.29e-01 -0.109 0.112 0.591 gdT L2
ENSG00000162607 USP1 410934 sc-eQTL 2.97e-01 -0.111 0.106 0.591 gdT L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 9.00e-01 -0.0139 0.11 0.591 gdT L2
ENSG00000079739 PGM1 -746180 sc-eQTL 5.46e-01 0.0549 0.0909 0.593 intMono L2
ENSG00000088035 ALG6 -520344 sc-eQTL 4.68e-01 0.0615 0.0846 0.593 intMono L2
ENSG00000116641 DOCK7 158845 sc-eQTL 6.43e-01 0.0401 0.0865 0.593 intMono L2
ENSG00000125703 ATG4C 63099 sc-eQTL 8.85e-01 -0.012 0.0826 0.593 intMono L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 6.22e-01 0.0449 0.091 0.593 intMono L2
ENSG00000162607 USP1 410934 sc-eQTL 5.90e-01 -0.0499 0.0925 0.593 intMono L2
ENSG00000240563 L1TD1 652382 sc-eQTL 4.27e-01 -0.0541 0.068 0.593 intMono L2
ENSG00000079739 PGM1 -746180 sc-eQTL 6.77e-01 -0.0354 0.0848 0.597 ncMono L2
ENSG00000088035 ALG6 -520344 sc-eQTL 3.18e-01 0.093 0.0929 0.597 ncMono L2
ENSG00000116641 DOCK7 158845 sc-eQTL 9.14e-01 0.00989 0.0917 0.597 ncMono L2
ENSG00000125703 ATG4C 63099 sc-eQTL 2.87e-01 0.0912 0.0854 0.597 ncMono L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 4.40e-01 0.0692 0.0895 0.597 ncMono L2
ENSG00000162607 USP1 410934 sc-eQTL 8.70e-01 -0.0151 0.0915 0.597 ncMono L2
ENSG00000240563 L1TD1 652382 sc-eQTL 3.19e-01 -0.0647 0.0648 0.597 ncMono L2
ENSG00000079739 PGM1 -746180 sc-eQTL 3.27e-01 -0.0986 0.1 0.59 pDC L2
ENSG00000088035 ALG6 -520344 sc-eQTL 3.35e-02 0.207 0.0966 0.59 pDC L2
ENSG00000116641 DOCK7 158845 sc-eQTL 6.24e-01 -0.0492 0.1 0.59 pDC L2
ENSG00000125703 ATG4C 63099 sc-eQTL 2.99e-01 0.0932 0.0895 0.59 pDC L2
ENSG00000142856 ITGB3BP -746490 sc-eQTL 5.78e-02 -0.19 0.0996 0.59 pDC L2
ENSG00000162607 USP1 410934 sc-eQTL 2.40e-01 0.121 0.102 0.59 pDC L2
ENSG00000203965 EFCAB7 -676141 sc-eQTL 6.86e-01 -0.0361 0.0892 0.59 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -746180 sc-eQTL 5.93e-01 -0.047 0.0876 0.592 B_Memory LOneK1K
ENSG00000088035 ALG6 -520344 sc-eQTL 2.82e-01 -0.104 0.0967 0.592 B_Memory LOneK1K
ENSG00000116641 DOCK7 158845 sc-eQTL 2.34e-01 0.1 0.0838 0.592 B_Memory LOneK1K
ENSG00000125703 ATG4C 63099 sc-eQTL 5.01e-01 -0.0458 0.0679 0.592 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -746490 sc-eQTL 5.00e-01 -0.0603 0.0893 0.592 B_Memory LOneK1K
ENSG00000162607 USP1 410934 sc-eQTL 1.36e-01 0.129 0.0863 0.592 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -676141 sc-eQTL 2.60e-01 -0.105 0.0928 0.592 B_Memory LOneK1K
ENSG00000079739 PGM1 -746180 sc-eQTL 3.41e-01 0.0862 0.0904 0.592 B_Naive LOneK1K
ENSG00000088035 ALG6 -520344 sc-eQTL 4.55e-01 0.0698 0.0932 0.592 B_Naive LOneK1K
ENSG00000116641 DOCK7 158845 sc-eQTL 3.56e-01 -0.0805 0.087 0.592 B_Naive LOneK1K
ENSG00000125703 ATG4C 63099 sc-eQTL 9.83e-03 0.171 0.0655 0.592 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -746490 sc-eQTL 4.07e-01 -0.078 0.0939 0.592 B_Naive LOneK1K
ENSG00000162607 USP1 410934 sc-eQTL 2.85e-01 -0.0863 0.0806 0.592 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -676141 sc-eQTL 1.70e-01 -0.13 0.0941 0.592 B_Naive LOneK1K
ENSG00000079739 PGM1 -746180 sc-eQTL 2.99e-01 0.0876 0.0841 0.592 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -520344 sc-eQTL 4.74e-02 -0.161 0.0809 0.592 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 158845 sc-eQTL 5.68e-01 0.047 0.0822 0.592 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 63099 sc-eQTL 2.05e-01 0.0721 0.0566 0.592 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -746490 sc-eQTL 3.56e-01 0.0777 0.0839 0.592 CD14_Mono LOneK1K
ENSG00000162607 USP1 410934 sc-eQTL 4.32e-01 -0.0565 0.0717 0.592 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 652382 sc-eQTL 7.92e-01 0.0206 0.0779 0.592 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -746180 sc-eQTL 5.89e-01 0.0435 0.0804 0.593 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -520344 sc-eQTL 1.86e-01 0.121 0.091 0.593 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 158845 sc-eQTL 8.60e-01 0.0159 0.0904 0.593 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 63099 sc-eQTL 6.15e-01 0.0388 0.077 0.593 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -746490 sc-eQTL 3.64e-01 0.0812 0.0893 0.593 CD16_Mono LOneK1K
ENSG00000162607 USP1 410934 sc-eQTL 3.09e-01 -0.0854 0.0838 0.593 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 652382 sc-eQTL 1.15e-01 -0.0901 0.057 0.593 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -746180 sc-eQTL 3.03e-01 0.0724 0.0701 0.591 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -520344 sc-eQTL 8.68e-01 0.014 0.0844 0.591 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 158845 sc-eQTL 1.13e-02 0.19 0.0744 0.591 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 63099 sc-eQTL 8.92e-01 -0.0102 0.0755 0.591 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -746490 sc-eQTL 8.40e-01 0.018 0.0894 0.591 NK_CD56dim LOneK1K
ENSG00000162607 USP1 410934 sc-eQTL 4.07e-01 -0.0673 0.081 0.591 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -676141 sc-eQTL 4.59e-01 0.0733 0.0986 0.591 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -746180 eQTL 0.0465 -0.0355 0.0178 0.0 0.0 0.382
ENSG00000116641 DOCK7 158863 eQTL 3.61e-11 0.145 0.0216 0.0 0.0 0.382
ENSG00000125703 ATG4C 63099 eQTL 4.94e-05 0.0678 0.0166 0.00174 0.00201 0.382
ENSG00000132855 ANGPTL3 249744 pQTL 0.00139 0.0935 0.0292 0.0 0.0 0.39
ENSG00000142856 ITGB3BP -746490 eQTL 0.00323 -0.086 0.0291 0.0 0.0 0.382
ENSG00000162607 USP1 410934 eQTL 0.00113 0.0417 0.0128 0.0 0.0 0.382

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 158863 2.22e-05 1.48e-05 6.41e-06 1.21e-05 2.4e-06 6.28e-06 2.08e-05 2.44e-06 1.37e-05 8.88e-06 2.1e-05 7.38e-06 2.69e-05 6.04e-06 5.45e-06 1.04e-05 8.12e-06 1.32e-05 5.89e-06 4.26e-06 8.17e-06 1.63e-05 1.74e-05 7.95e-06 2.18e-05 5.31e-06 8.02e-06 7.92e-06 1.37e-05 1.54e-05 1.06e-05 1.65e-06 2.22e-06 4.8e-06 6.46e-06 3.97e-06 2.68e-06 2.73e-06 3.22e-06 2.18e-06 1.34e-06 1.71e-05 3.25e-06 2.96e-07 1.44e-06 2.68e-06 2.9e-06 7.53e-07 4.51e-07
ENSG00000125703 ATG4C 63099 4.79e-05 3.64e-05 6.78e-06 1.61e-05 6.33e-06 1.64e-05 4.88e-05 4.94e-06 3.47e-05 1.69e-05 4.22e-05 2.01e-05 5.32e-05 1.54e-05 8.1e-06 2.25e-05 1.98e-05 2.79e-05 8.79e-06 7.09e-06 1.78e-05 3.87e-05 3.5e-05 1.02e-05 5.03e-05 9.2e-06 1.62e-05 1.46e-05 3.49e-05 2.61e-05 2.34e-05 1.61e-06 2.9e-06 7.85e-06 1.24e-05 5.99e-06 3.43e-06 3.17e-06 5.26e-06 3.56e-06 1.81e-06 4.16e-05 4.22e-06 3.66e-07 2.67e-06 4.38e-06 4.55e-06 1.65e-06 1.54e-06
ENSG00000142856 ITGB3BP -746490 5.21e-06 2.63e-06 1.24e-06 3.22e-06 4.55e-07 1.29e-06 2.55e-06 3.94e-07 2.13e-06 1.06e-06 3.7e-06 1.4e-06 6.47e-06 1.16e-06 1.02e-06 2.69e-06 1.87e-06 2.78e-06 1.45e-06 1.24e-06 2.63e-06 4.05e-06 3.53e-06 1.81e-06 3.56e-06 1.33e-06 1.47e-06 1.46e-06 2.02e-06 3.06e-06 2.01e-06 5.62e-07 7.54e-07 1.84e-06 1.98e-06 8.85e-07 1.65e-06 4.39e-07 9.23e-07 5.91e-07 1.96e-07 3.95e-06 1.61e-06 1.56e-07 3.48e-07 1.32e-06 8.85e-07 2.32e-07 2.41e-07