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Genes within 1Mb (chr1:62842772:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -750639 sc-eQTL 4.52e-01 0.0608 0.0806 0.615 B L1
ENSG00000088035 ALG6 -524803 sc-eQTL 8.80e-01 -0.0126 0.0837 0.615 B L1
ENSG00000116641 DOCK7 154386 sc-eQTL 7.55e-01 -0.0261 0.0836 0.615 B L1
ENSG00000125703 ATG4C 58640 sc-eQTL 2.73e-01 0.0637 0.058 0.615 B L1
ENSG00000142856 ITGB3BP -750949 sc-eQTL 1.75e-01 -0.125 0.0921 0.615 B L1
ENSG00000162607 USP1 406475 sc-eQTL 8.00e-01 -0.0204 0.0803 0.615 B L1
ENSG00000203965 EFCAB7 -680600 sc-eQTL 1.41e-01 -0.139 0.0943 0.615 B L1
ENSG00000079739 PGM1 -750639 sc-eQTL 9.80e-01 0.00177 0.0692 0.615 CD4T L1
ENSG00000088035 ALG6 -524803 sc-eQTL 8.63e-01 -0.0132 0.0764 0.615 CD4T L1
ENSG00000116641 DOCK7 154386 sc-eQTL 5.88e-01 0.042 0.0773 0.615 CD4T L1
ENSG00000125703 ATG4C 58640 sc-eQTL 7.84e-01 0.0171 0.0625 0.615 CD4T L1
ENSG00000142856 ITGB3BP -750949 sc-eQTL 6.40e-01 0.0415 0.0886 0.615 CD4T L1
ENSG00000162607 USP1 406475 sc-eQTL 7.80e-01 0.017 0.0606 0.615 CD4T L1
ENSG00000203965 EFCAB7 -680600 sc-eQTL 7.35e-02 0.142 0.079 0.615 CD4T L1
ENSG00000079739 PGM1 -750639 sc-eQTL 8.06e-01 0.0189 0.0768 0.615 CD8T L1
ENSG00000088035 ALG6 -524803 sc-eQTL 5.60e-01 -0.0494 0.0847 0.615 CD8T L1
ENSG00000116641 DOCK7 154386 sc-eQTL 9.27e-01 -0.00788 0.0858 0.615 CD8T L1
ENSG00000125703 ATG4C 58640 sc-eQTL 1.56e-02 0.196 0.0804 0.615 CD8T L1
ENSG00000142856 ITGB3BP -750949 sc-eQTL 8.95e-01 0.0121 0.0912 0.615 CD8T L1
ENSG00000162607 USP1 406475 sc-eQTL 7.20e-01 -0.0255 0.071 0.615 CD8T L1
ENSG00000203965 EFCAB7 -680600 sc-eQTL 5.42e-01 0.0555 0.0908 0.615 CD8T L1
ENSG00000079739 PGM1 -750639 sc-eQTL 5.78e-01 -0.0483 0.0867 0.615 DC L1
ENSG00000088035 ALG6 -524803 sc-eQTL 9.73e-01 -0.00302 0.0896 0.615 DC L1
ENSG00000116641 DOCK7 154386 sc-eQTL 9.24e-01 0.00877 0.0918 0.615 DC L1
ENSG00000125703 ATG4C 58640 sc-eQTL 7.67e-01 -0.0213 0.0718 0.615 DC L1
ENSG00000142856 ITGB3BP -750949 sc-eQTL 9.98e-01 0.000273 0.1 0.615 DC L1
ENSG00000162607 USP1 406475 sc-eQTL 7.21e-01 0.0313 0.0876 0.615 DC L1
ENSG00000203965 EFCAB7 -680600 sc-eQTL 4.34e-01 -0.0684 0.0873 0.615 DC L1
ENSG00000079739 PGM1 -750639 sc-eQTL 5.49e-01 0.05 0.0833 0.615 Mono L1
ENSG00000088035 ALG6 -524803 sc-eQTL 6.43e-02 -0.161 0.0863 0.615 Mono L1
ENSG00000116641 DOCK7 154386 sc-eQTL 3.84e-01 0.0733 0.084 0.615 Mono L1
ENSG00000125703 ATG4C 58640 sc-eQTL 2.65e-01 0.0634 0.0567 0.615 Mono L1
ENSG00000142856 ITGB3BP -750949 sc-eQTL 4.42e-01 0.0692 0.0898 0.615 Mono L1
ENSG00000162607 USP1 406475 sc-eQTL 4.98e-01 -0.0501 0.0737 0.615 Mono L1
ENSG00000240563 L1TD1 647923 sc-eQTL 2.53e-01 -0.0788 0.0687 0.615 Mono L1
ENSG00000079739 PGM1 -750639 sc-eQTL 3.99e-01 0.0609 0.0722 0.616 NK L1
ENSG00000088035 ALG6 -524803 sc-eQTL 7.74e-01 -0.0244 0.0847 0.616 NK L1
ENSG00000116641 DOCK7 154386 sc-eQTL 7.99e-02 0.122 0.0693 0.616 NK L1
ENSG00000125703 ATG4C 58640 sc-eQTL 8.24e-01 0.0167 0.075 0.616 NK L1
ENSG00000142856 ITGB3BP -750949 sc-eQTL 9.83e-01 -0.00196 0.0932 0.616 NK L1
ENSG00000162607 USP1 406475 sc-eQTL 9.77e-01 0.00237 0.0833 0.616 NK L1
ENSG00000203965 EFCAB7 -680600 sc-eQTL 7.31e-01 -0.0348 0.101 0.616 NK L1
ENSG00000079739 PGM1 -750639 sc-eQTL 2.33e-01 -0.0968 0.0809 0.615 Other_T L1
ENSG00000088035 ALG6 -524803 sc-eQTL 3.38e-01 0.0782 0.0814 0.615 Other_T L1
ENSG00000116641 DOCK7 154386 sc-eQTL 7.68e-01 0.0246 0.0833 0.615 Other_T L1
ENSG00000125703 ATG4C 58640 sc-eQTL 6.35e-03 0.195 0.0708 0.615 Other_T L1
ENSG00000142856 ITGB3BP -750949 sc-eQTL 1.78e-01 -0.086 0.0637 0.615 Other_T L1
ENSG00000162607 USP1 406475 sc-eQTL 7.89e-01 -0.0148 0.0554 0.615 Other_T L1
ENSG00000203965 EFCAB7 -680600 sc-eQTL 2.43e-01 0.115 0.0983 0.615 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -750639 sc-eQTL 7.28e-01 -0.0387 0.111 0.612 B_Activated L2
ENSG00000088035 ALG6 -524803 sc-eQTL 6.09e-01 -0.0546 0.106 0.612 B_Activated L2
ENSG00000116641 DOCK7 154386 sc-eQTL 8.16e-01 -0.0231 0.0992 0.612 B_Activated L2
ENSG00000125703 ATG4C 58640 sc-eQTL 5.25e-01 -0.0664 0.104 0.612 B_Activated L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 4.01e-02 -0.208 0.101 0.612 B_Activated L2
ENSG00000162607 USP1 406475 sc-eQTL 8.87e-01 -0.0157 0.11 0.612 B_Activated L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 5.96e-01 0.0512 0.0964 0.612 B_Activated L2
ENSG00000079739 PGM1 -750639 sc-eQTL 3.79e-01 -0.0874 0.0991 0.616 B_Intermediate L2
ENSG00000088035 ALG6 -524803 sc-eQTL 8.11e-01 -0.0242 0.101 0.616 B_Intermediate L2
ENSG00000116641 DOCK7 154386 sc-eQTL 5.63e-01 0.0557 0.0962 0.616 B_Intermediate L2
ENSG00000125703 ATG4C 58640 sc-eQTL 6.45e-01 -0.0376 0.0815 0.616 B_Intermediate L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 9.43e-01 -0.00698 0.0971 0.616 B_Intermediate L2
ENSG00000162607 USP1 406475 sc-eQTL 8.28e-01 0.0211 0.0969 0.616 B_Intermediate L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 2.78e-01 -0.104 0.0959 0.616 B_Intermediate L2
ENSG00000079739 PGM1 -750639 sc-eQTL 9.42e-01 0.00714 0.0972 0.614 B_Memory L2
ENSG00000088035 ALG6 -524803 sc-eQTL 6.99e-01 -0.0382 0.0988 0.614 B_Memory L2
ENSG00000116641 DOCK7 154386 sc-eQTL 5.02e-01 0.0622 0.0926 0.614 B_Memory L2
ENSG00000125703 ATG4C 58640 sc-eQTL 6.44e-01 -0.0407 0.088 0.614 B_Memory L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 8.31e-01 -0.0216 0.101 0.614 B_Memory L2
ENSG00000162607 USP1 406475 sc-eQTL 3.51e-01 0.0949 0.101 0.614 B_Memory L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 8.54e-01 -0.0184 0.1 0.614 B_Memory L2
ENSG00000079739 PGM1 -750639 sc-eQTL 5.04e-01 0.0649 0.0969 0.615 B_Naive1 L2
ENSG00000088035 ALG6 -524803 sc-eQTL 4.56e-01 0.0726 0.0973 0.615 B_Naive1 L2
ENSG00000116641 DOCK7 154386 sc-eQTL 2.28e-01 -0.113 0.093 0.615 B_Naive1 L2
ENSG00000125703 ATG4C 58640 sc-eQTL 3.63e-02 0.15 0.0712 0.615 B_Naive1 L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 2.80e-01 -0.103 0.0951 0.615 B_Naive1 L2
ENSG00000162607 USP1 406475 sc-eQTL 2.21e-01 -0.103 0.0836 0.615 B_Naive1 L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 1.45e-01 -0.148 0.101 0.615 B_Naive1 L2
ENSG00000079739 PGM1 -750639 sc-eQTL 2.41e-01 0.113 0.0962 0.616 B_Naive2 L2
ENSG00000088035 ALG6 -524803 sc-eQTL 5.20e-01 -0.0647 0.101 0.616 B_Naive2 L2
ENSG00000116641 DOCK7 154386 sc-eQTL 6.95e-01 0.038 0.0967 0.616 B_Naive2 L2
ENSG00000125703 ATG4C 58640 sc-eQTL 7.73e-01 0.0269 0.0931 0.616 B_Naive2 L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 7.73e-01 -0.0291 0.101 0.616 B_Naive2 L2
ENSG00000162607 USP1 406475 sc-eQTL 7.14e-01 -0.0353 0.0961 0.616 B_Naive2 L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 8.34e-01 -0.021 0.1 0.616 B_Naive2 L2
ENSG00000079739 PGM1 -750639 sc-eQTL 4.40e-02 -0.195 0.0964 0.609 CD4_CTL L2
ENSG00000088035 ALG6 -524803 sc-eQTL 9.35e-01 0.00843 0.103 0.609 CD4_CTL L2
ENSG00000116641 DOCK7 154386 sc-eQTL 1.34e-01 0.135 0.0895 0.609 CD4_CTL L2
ENSG00000125703 ATG4C 58640 sc-eQTL 6.26e-01 0.0454 0.0931 0.609 CD4_CTL L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 5.58e-02 0.19 0.0987 0.609 CD4_CTL L2
ENSG00000162607 USP1 406475 sc-eQTL 9.25e-01 0.00897 0.0948 0.609 CD4_CTL L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 1.83e-01 -0.126 0.0942 0.609 CD4_CTL L2
ENSG00000079739 PGM1 -750639 sc-eQTL 6.50e-01 0.0353 0.0775 0.615 CD4_Naive L2
ENSG00000088035 ALG6 -524803 sc-eQTL 4.83e-01 0.0591 0.0842 0.615 CD4_Naive L2
ENSG00000116641 DOCK7 154386 sc-eQTL 7.33e-01 -0.0283 0.0828 0.615 CD4_Naive L2
ENSG00000125703 ATG4C 58640 sc-eQTL 8.10e-01 -0.0177 0.0732 0.615 CD4_Naive L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 6.18e-01 -0.0447 0.0894 0.615 CD4_Naive L2
ENSG00000162607 USP1 406475 sc-eQTL 4.22e-01 0.0549 0.0683 0.615 CD4_Naive L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 1.17e-02 0.223 0.0875 0.615 CD4_Naive L2
ENSG00000079739 PGM1 -750639 sc-eQTL 7.15e-01 0.0296 0.0811 0.615 CD4_TCM L2
ENSG00000088035 ALG6 -524803 sc-eQTL 5.40e-02 -0.181 0.0934 0.615 CD4_TCM L2
ENSG00000116641 DOCK7 154386 sc-eQTL 8.79e-01 -0.0128 0.0835 0.615 CD4_TCM L2
ENSG00000125703 ATG4C 58640 sc-eQTL 6.59e-01 0.0359 0.0813 0.615 CD4_TCM L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 2.51e-01 0.11 0.0955 0.615 CD4_TCM L2
ENSG00000162607 USP1 406475 sc-eQTL 6.58e-01 -0.0348 0.0786 0.615 CD4_TCM L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 3.26e-01 0.0912 0.0925 0.615 CD4_TCM L2
ENSG00000079739 PGM1 -750639 sc-eQTL 8.89e-01 0.0134 0.0955 0.615 CD4_TEM L2
ENSG00000088035 ALG6 -524803 sc-eQTL 3.01e-01 -0.0994 0.0958 0.615 CD4_TEM L2
ENSG00000116641 DOCK7 154386 sc-eQTL 9.66e-01 0.004 0.0936 0.615 CD4_TEM L2
ENSG00000125703 ATG4C 58640 sc-eQTL 4.64e-01 0.0666 0.0908 0.615 CD4_TEM L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 8.15e-01 0.022 0.0938 0.615 CD4_TEM L2
ENSG00000162607 USP1 406475 sc-eQTL 5.97e-01 0.047 0.0888 0.615 CD4_TEM L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 3.00e-01 -0.101 0.097 0.615 CD4_TEM L2
ENSG00000079739 PGM1 -750639 sc-eQTL 1.64e-01 0.122 0.087 0.615 CD8_CTL L2
ENSG00000088035 ALG6 -524803 sc-eQTL 3.24e-01 -0.0917 0.0927 0.615 CD8_CTL L2
ENSG00000116641 DOCK7 154386 sc-eQTL 1.91e-01 0.115 0.0879 0.615 CD8_CTL L2
ENSG00000125703 ATG4C 58640 sc-eQTL 2.17e-02 0.214 0.0927 0.615 CD8_CTL L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 6.48e-01 -0.0446 0.0976 0.615 CD8_CTL L2
ENSG00000162607 USP1 406475 sc-eQTL 6.26e-01 0.0426 0.0874 0.615 CD8_CTL L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 3.31e-01 0.0972 0.0998 0.615 CD8_CTL L2
ENSG00000079739 PGM1 -750639 sc-eQTL 7.96e-01 0.023 0.089 0.615 CD8_Naive L2
ENSG00000088035 ALG6 -524803 sc-eQTL 2.99e-01 -0.0958 0.092 0.615 CD8_Naive L2
ENSG00000116641 DOCK7 154386 sc-eQTL 3.13e-02 -0.204 0.0943 0.615 CD8_Naive L2
ENSG00000125703 ATG4C 58640 sc-eQTL 1.37e-01 0.136 0.091 0.615 CD8_Naive L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 7.36e-01 0.0313 0.0926 0.615 CD8_Naive L2
ENSG00000162607 USP1 406475 sc-eQTL 9.06e-01 0.00928 0.0783 0.615 CD8_Naive L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 5.34e-01 0.0543 0.0873 0.615 CD8_Naive L2
ENSG00000079739 PGM1 -750639 sc-eQTL 8.37e-03 -0.261 0.098 0.613 CD8_TCM L2
ENSG00000088035 ALG6 -524803 sc-eQTL 1.62e-01 0.141 0.1 0.613 CD8_TCM L2
ENSG00000116641 DOCK7 154386 sc-eQTL 7.85e-01 0.027 0.0985 0.613 CD8_TCM L2
ENSG00000125703 ATG4C 58640 sc-eQTL 8.66e-01 -0.0171 0.101 0.613 CD8_TCM L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.75e-01 0.0869 0.0978 0.613 CD8_TCM L2
ENSG00000162607 USP1 406475 sc-eQTL 9.47e-01 0.0063 0.0943 0.613 CD8_TCM L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 2.07e-02 0.23 0.0985 0.613 CD8_TCM L2
ENSG00000079739 PGM1 -750639 sc-eQTL 5.02e-01 0.0685 0.102 0.621 CD8_TEM L2
ENSG00000088035 ALG6 -524803 sc-eQTL 3.06e-02 0.22 0.101 0.621 CD8_TEM L2
ENSG00000116641 DOCK7 154386 sc-eQTL 8.65e-01 0.0169 0.0991 0.621 CD8_TEM L2
ENSG00000125703 ATG4C 58640 sc-eQTL 4.19e-02 0.193 0.0943 0.621 CD8_TEM L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 6.56e-01 0.046 0.103 0.621 CD8_TEM L2
ENSG00000162607 USP1 406475 sc-eQTL 3.28e-01 -0.0963 0.0982 0.621 CD8_TEM L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 9.64e-01 -0.00452 0.1 0.621 CD8_TEM L2
ENSG00000079739 PGM1 -750639 sc-eQTL 1.37e-01 -0.139 0.0932 0.613 MAIT L2
ENSG00000088035 ALG6 -524803 sc-eQTL 7.70e-01 0.0271 0.0927 0.613 MAIT L2
ENSG00000116641 DOCK7 154386 sc-eQTL 9.03e-01 -0.0109 0.0888 0.613 MAIT L2
ENSG00000125703 ATG4C 58640 sc-eQTL 4.30e-02 0.189 0.0927 0.613 MAIT L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 5.13e-01 -0.0614 0.0937 0.613 MAIT L2
ENSG00000162607 USP1 406475 sc-eQTL 3.60e-01 0.0852 0.0929 0.613 MAIT L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 2.51e-01 0.111 0.0963 0.613 MAIT L2
ENSG00000079739 PGM1 -750639 sc-eQTL 6.64e-01 -0.0413 0.095 0.613 NK_CD56bright L2
ENSG00000088035 ALG6 -524803 sc-eQTL 7.48e-01 -0.0314 0.0974 0.613 NK_CD56bright L2
ENSG00000116641 DOCK7 154386 sc-eQTL 2.77e-01 -0.0917 0.0841 0.613 NK_CD56bright L2
ENSG00000125703 ATG4C 58640 sc-eQTL 4.65e-01 -0.069 0.0942 0.613 NK_CD56bright L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 9.35e-01 -0.008 0.0982 0.613 NK_CD56bright L2
ENSG00000162607 USP1 406475 sc-eQTL 4.90e-01 0.07 0.101 0.613 NK_CD56bright L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 1.62e-01 -0.135 0.0964 0.613 NK_CD56bright L2
ENSG00000079739 PGM1 -750639 sc-eQTL 4.31e-01 -0.0591 0.075 0.614 NK_CD56dim L2
ENSG00000088035 ALG6 -524803 sc-eQTL 4.19e-01 -0.077 0.0951 0.614 NK_CD56dim L2
ENSG00000116641 DOCK7 154386 sc-eQTL 1.52e-01 0.118 0.0825 0.614 NK_CD56dim L2
ENSG00000125703 ATG4C 58640 sc-eQTL 5.75e-01 -0.0472 0.0841 0.614 NK_CD56dim L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 6.22e-01 -0.0473 0.0957 0.614 NK_CD56dim L2
ENSG00000162607 USP1 406475 sc-eQTL 9.31e-01 0.00808 0.0929 0.614 NK_CD56dim L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 8.63e-01 0.0179 0.103 0.614 NK_CD56dim L2
ENSG00000079739 PGM1 -750639 sc-eQTL 3.34e-01 0.0973 0.101 0.619 NK_HLA L2
ENSG00000088035 ALG6 -524803 sc-eQTL 3.29e-01 -0.102 0.104 0.619 NK_HLA L2
ENSG00000116641 DOCK7 154386 sc-eQTL 8.05e-01 0.0197 0.0799 0.619 NK_HLA L2
ENSG00000125703 ATG4C 58640 sc-eQTL 1.29e-01 0.141 0.0924 0.619 NK_HLA L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 9.91e-01 0.00109 0.0976 0.619 NK_HLA L2
ENSG00000162607 USP1 406475 sc-eQTL 8.08e-01 0.0248 0.102 0.619 NK_HLA L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 5.50e-01 0.0556 0.0928 0.619 NK_HLA L2
ENSG00000079739 PGM1 -750639 sc-eQTL 1.80e-01 0.109 0.0809 0.614 NK_cytokine L2
ENSG00000088035 ALG6 -524803 sc-eQTL 6.76e-02 0.167 0.0911 0.614 NK_cytokine L2
ENSG00000116641 DOCK7 154386 sc-eQTL 1.60e-01 0.119 0.0846 0.614 NK_cytokine L2
ENSG00000125703 ATG4C 58640 sc-eQTL 4.88e-01 0.0604 0.0869 0.614 NK_cytokine L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 7.75e-01 -0.0258 0.0901 0.614 NK_cytokine L2
ENSG00000162607 USP1 406475 sc-eQTL 9.35e-01 0.0077 0.0947 0.614 NK_cytokine L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 4.85e-01 0.067 0.0959 0.614 NK_cytokine L2
ENSG00000079739 PGM1 -750639 sc-eQTL 9.22e-01 -0.0107 0.11 0.619 PB L2
ENSG00000088035 ALG6 -524803 sc-eQTL 9.08e-01 0.0134 0.116 0.619 PB L2
ENSG00000116641 DOCK7 154386 sc-eQTL 8.58e-01 -0.0222 0.124 0.619 PB L2
ENSG00000125703 ATG4C 58640 sc-eQTL 2.96e-01 0.113 0.107 0.619 PB L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 7.31e-01 -0.0371 0.108 0.619 PB L2
ENSG00000162607 USP1 406475 sc-eQTL 8.53e-01 0.0199 0.107 0.619 PB L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 8.36e-01 0.0245 0.118 0.619 PB L2
ENSG00000079739 PGM1 -750639 sc-eQTL 9.47e-01 0.00578 0.0875 0.615 Pro_T L2
ENSG00000088035 ALG6 -524803 sc-eQTL 9.12e-01 -0.0098 0.0891 0.615 Pro_T L2
ENSG00000116641 DOCK7 154386 sc-eQTL 3.71e-01 0.0799 0.0892 0.615 Pro_T L2
ENSG00000125703 ATG4C 58640 sc-eQTL 9.55e-01 0.00443 0.0782 0.615 Pro_T L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.02e-02 -0.169 0.0776 0.615 Pro_T L2
ENSG00000162607 USP1 406475 sc-eQTL 6.69e-01 0.0231 0.0539 0.615 Pro_T L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 1.65e-01 0.127 0.0908 0.615 Pro_T L2
ENSG00000079739 PGM1 -750639 sc-eQTL 8.91e-01 0.0128 0.0927 0.615 Treg L2
ENSG00000088035 ALG6 -524803 sc-eQTL 7.53e-01 0.0313 0.0991 0.615 Treg L2
ENSG00000116641 DOCK7 154386 sc-eQTL 4.58e-01 0.0676 0.0909 0.615 Treg L2
ENSG00000125703 ATG4C 58640 sc-eQTL 5.97e-01 0.0492 0.093 0.615 Treg L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 2.72e-01 0.107 0.097 0.615 Treg L2
ENSG00000162607 USP1 406475 sc-eQTL 5.88e-01 -0.051 0.0941 0.615 Treg L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 6.63e-01 -0.0406 0.0931 0.615 Treg L2
ENSG00000079739 PGM1 -750639 sc-eQTL 4.04e-01 -0.0774 0.0925 0.61 cDC L2
ENSG00000088035 ALG6 -524803 sc-eQTL 7.61e-02 -0.166 0.0931 0.61 cDC L2
ENSG00000116641 DOCK7 154386 sc-eQTL 4.95e-01 0.063 0.0921 0.61 cDC L2
ENSG00000125703 ATG4C 58640 sc-eQTL 4.74e-01 -0.0573 0.0799 0.61 cDC L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.90e-01 0.0872 0.101 0.61 cDC L2
ENSG00000162607 USP1 406475 sc-eQTL 7.18e-01 0.0327 0.0903 0.61 cDC L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 9.82e-01 0.00187 0.0815 0.61 cDC L2
ENSG00000079739 PGM1 -750639 sc-eQTL 2.48e-01 0.0998 0.0862 0.615 cMono_IL1B L2
ENSG00000088035 ALG6 -524803 sc-eQTL 5.86e-02 -0.163 0.0858 0.615 cMono_IL1B L2
ENSG00000116641 DOCK7 154386 sc-eQTL 6.24e-01 0.0448 0.0912 0.615 cMono_IL1B L2
ENSG00000125703 ATG4C 58640 sc-eQTL 3.70e-01 0.0576 0.0641 0.615 cMono_IL1B L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.91e-01 0.078 0.0908 0.615 cMono_IL1B L2
ENSG00000162607 USP1 406475 sc-eQTL 8.54e-01 -0.0148 0.0802 0.615 cMono_IL1B L2
ENSG00000240563 L1TD1 647923 sc-eQTL 6.74e-01 -0.034 0.0805 0.615 cMono_IL1B L2
ENSG00000079739 PGM1 -750639 sc-eQTL 6.20e-01 0.0474 0.0954 0.615 cMono_S100A L2
ENSG00000088035 ALG6 -524803 sc-eQTL 1.56e-01 -0.137 0.0963 0.615 cMono_S100A L2
ENSG00000116641 DOCK7 154386 sc-eQTL 6.93e-01 0.0354 0.0897 0.615 cMono_S100A L2
ENSG00000125703 ATG4C 58640 sc-eQTL 7.73e-01 0.0224 0.0777 0.615 cMono_S100A L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.59e-01 0.0805 0.0875 0.615 cMono_S100A L2
ENSG00000162607 USP1 406475 sc-eQTL 5.32e-01 -0.0564 0.0901 0.615 cMono_S100A L2
ENSG00000240563 L1TD1 647923 sc-eQTL 3.28e-01 0.0734 0.0749 0.615 cMono_S100A L2
ENSG00000079739 PGM1 -750639 sc-eQTL 3.73e-01 -0.0969 0.109 0.615 gdT L2
ENSG00000088035 ALG6 -524803 sc-eQTL 3.70e-01 -0.104 0.116 0.615 gdT L2
ENSG00000116641 DOCK7 154386 sc-eQTL 3.85e-01 0.0989 0.114 0.615 gdT L2
ENSG00000125703 ATG4C 58640 sc-eQTL 5.67e-01 -0.0623 0.109 0.615 gdT L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.38e-01 -0.111 0.115 0.615 gdT L2
ENSG00000162607 USP1 406475 sc-eQTL 1.62e-01 -0.153 0.109 0.615 gdT L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 8.10e-01 0.0274 0.114 0.615 gdT L2
ENSG00000079739 PGM1 -750639 sc-eQTL 6.45e-01 0.0439 0.0951 0.618 intMono L2
ENSG00000088035 ALG6 -524803 sc-eQTL 4.91e-01 0.0611 0.0886 0.618 intMono L2
ENSG00000116641 DOCK7 154386 sc-eQTL 3.55e-01 0.0838 0.0904 0.618 intMono L2
ENSG00000125703 ATG4C 58640 sc-eQTL 6.47e-01 -0.0397 0.0864 0.618 intMono L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 5.49e-01 0.0572 0.0951 0.618 intMono L2
ENSG00000162607 USP1 406475 sc-eQTL 6.20e-01 -0.048 0.0968 0.618 intMono L2
ENSG00000240563 L1TD1 647923 sc-eQTL 2.52e-01 -0.0815 0.071 0.618 intMono L2
ENSG00000079739 PGM1 -750639 sc-eQTL 5.18e-01 -0.057 0.0879 0.62 ncMono L2
ENSG00000088035 ALG6 -524803 sc-eQTL 3.81e-01 0.0847 0.0965 0.62 ncMono L2
ENSG00000116641 DOCK7 154386 sc-eQTL 7.30e-01 -0.0328 0.0951 0.62 ncMono L2
ENSG00000125703 ATG4C 58640 sc-eQTL 3.95e-01 0.0756 0.0887 0.62 ncMono L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 8.21e-01 0.0211 0.093 0.62 ncMono L2
ENSG00000162607 USP1 406475 sc-eQTL 8.17e-01 -0.022 0.095 0.62 ncMono L2
ENSG00000240563 L1TD1 647923 sc-eQTL 3.52e-01 -0.0628 0.0672 0.62 ncMono L2
ENSG00000079739 PGM1 -750639 sc-eQTL 9.09e-01 -0.0123 0.107 0.616 pDC L2
ENSG00000088035 ALG6 -524803 sc-eQTL 6.97e-02 0.188 0.103 0.616 pDC L2
ENSG00000116641 DOCK7 154386 sc-eQTL 6.58e-01 -0.0471 0.106 0.616 pDC L2
ENSG00000125703 ATG4C 58640 sc-eQTL 3.48e-01 0.0895 0.0952 0.616 pDC L2
ENSG00000142856 ITGB3BP -750949 sc-eQTL 8.04e-02 -0.187 0.106 0.616 pDC L2
ENSG00000162607 USP1 406475 sc-eQTL 3.60e-01 0.0999 0.109 0.616 pDC L2
ENSG00000203965 EFCAB7 -680600 sc-eQTL 6.16e-01 -0.0476 0.0948 0.616 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -750639 sc-eQTL 4.51e-01 -0.0692 0.0916 0.615 B_Memory LOneK1K
ENSG00000088035 ALG6 -524803 sc-eQTL 4.41e-01 -0.0781 0.101 0.615 B_Memory LOneK1K
ENSG00000116641 DOCK7 154386 sc-eQTL 1.62e-01 0.123 0.0876 0.615 B_Memory LOneK1K
ENSG00000125703 ATG4C 58640 sc-eQTL 5.26e-01 -0.0452 0.0711 0.615 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.05e-01 -0.0959 0.0933 0.615 B_Memory LOneK1K
ENSG00000162607 USP1 406475 sc-eQTL 4.50e-01 0.0687 0.0907 0.615 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -680600 sc-eQTL 3.67e-01 -0.0879 0.0973 0.615 B_Memory LOneK1K
ENSG00000079739 PGM1 -750639 sc-eQTL 2.95e-01 0.0985 0.0939 0.615 B_Naive LOneK1K
ENSG00000088035 ALG6 -524803 sc-eQTL 6.52e-01 0.0437 0.0969 0.615 B_Naive LOneK1K
ENSG00000116641 DOCK7 154386 sc-eQTL 5.74e-01 -0.0509 0.0904 0.615 B_Naive LOneK1K
ENSG00000125703 ATG4C 58640 sc-eQTL 1.70e-02 0.164 0.0681 0.615 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -750949 sc-eQTL 3.11e-01 -0.0988 0.0974 0.615 B_Naive LOneK1K
ENSG00000162607 USP1 406475 sc-eQTL 3.18e-01 -0.0837 0.0837 0.615 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -680600 sc-eQTL 2.52e-01 -0.112 0.0978 0.615 B_Naive LOneK1K
ENSG00000079739 PGM1 -750639 sc-eQTL 4.58e-01 0.0653 0.0879 0.615 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -524803 sc-eQTL 3.14e-02 -0.183 0.0843 0.615 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 154386 sc-eQTL 5.50e-01 0.0514 0.0857 0.615 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 58640 sc-eQTL 2.76e-01 0.0646 0.0591 0.615 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -750949 sc-eQTL 2.62e-01 0.0983 0.0875 0.615 CD14_Mono LOneK1K
ENSG00000162607 USP1 406475 sc-eQTL 4.15e-01 -0.0611 0.0748 0.615 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 647923 sc-eQTL 8.08e-01 0.0197 0.0812 0.615 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -750639 sc-eQTL 7.46e-01 0.0273 0.0843 0.616 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -524803 sc-eQTL 2.38e-01 0.113 0.0955 0.616 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 154386 sc-eQTL 6.94e-01 0.0373 0.0947 0.616 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 58640 sc-eQTL 9.34e-01 0.00666 0.0808 0.616 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -750949 sc-eQTL 5.25e-01 0.0597 0.0937 0.616 CD16_Mono LOneK1K
ENSG00000162607 USP1 406475 sc-eQTL 5.06e-01 -0.0587 0.088 0.616 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 647923 sc-eQTL 5.29e-02 -0.116 0.0596 0.616 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -750639 sc-eQTL 4.55e-01 0.0549 0.0734 0.614 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -524803 sc-eQTL 9.95e-01 -0.000534 0.0882 0.614 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 154386 sc-eQTL 3.83e-02 0.163 0.0782 0.614 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 58640 sc-eQTL 9.86e-01 0.00138 0.0789 0.614 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -750949 sc-eQTL 9.31e-01 -0.00813 0.0935 0.614 NK_CD56dim LOneK1K
ENSG00000162607 USP1 406475 sc-eQTL 6.45e-01 -0.0391 0.0848 0.614 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -680600 sc-eQTL 7.01e-01 0.0397 0.103 0.614 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 154404 eQTL 3.23e-07 0.115 0.0224 0.0 0.0 0.35
ENSG00000125703 ATG4C 58640 eQTL 5.5e-06 0.0779 0.017 0.0152 0.0147 0.35
ENSG00000132855 ANGPTL3 245285 pQTL 0.0177 0.0714 0.0301 0.0 0.0 0.356
ENSG00000142856 ITGB3BP -750949 eQTL 0.00402 -0.0862 0.0299 0.0 0.0 0.35
ENSG00000162607 USP1 406475 eQTL 0.000806 0.0441 0.0131 0.0 0.0 0.35

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 154404 1.96e-06 2.88e-06 3.19e-07 2.61e-06 4.91e-07 8.1e-07 2.49e-06 9.87e-07 2.35e-06 1.35e-06 3.2e-06 2.52e-06 3.66e-06 1.34e-06 8.93e-07 1.68e-06 9.79e-07 2.31e-06 1.04e-06 1.2e-06 8.63e-07 3.02e-06 2.61e-06 1.64e-06 4.41e-06 1.21e-06 1.61e-06 1.84e-06 2.61e-06 1.97e-06 1.97e-06 4.71e-07 5.04e-07 1.68e-06 2.13e-06 9.6e-07 9.24e-07 4.75e-07 1.2e-06 3.71e-07 7.69e-07 3.32e-06 5.41e-07 1.66e-07 4.11e-07 3.53e-07 8.3e-07 2.72e-07 2.23e-07
ENSG00000125703 ATG4C 58640 5.2e-06 7.92e-06 1.37e-06 6.3e-06 1.92e-06 4.01e-06 1e-05 1.92e-06 7.74e-06 4.89e-06 1.05e-05 5.35e-06 1.13e-05 3.97e-06 2.02e-06 5.71e-06 3.09e-06 4.76e-06 1.93e-06 2.59e-06 3.16e-06 7.58e-06 6.38e-06 3.25e-06 1.18e-05 2.92e-06 4.39e-06 3.14e-06 7.53e-06 7.58e-06 4.23e-06 9.58e-07 7.77e-07 3.36e-06 5.01e-06 2.06e-06 1.72e-06 2e-06 1.39e-06 1.15e-06 1.07e-06 8.29e-06 9.02e-07 2.81e-07 7.17e-07 1.63e-06 1.42e-06 8.03e-07 6.22e-07
ENSG00000142856 ITGB3BP -750949 2.64e-07 1.3e-07 4.08e-08 2.05e-07 9.16e-08 9.91e-08 1.53e-07 5.53e-08 1.44e-07 4.94e-08 1.55e-07 1.05e-07 1.41e-07 7.37e-08 6.18e-08 7.3e-08 3.94e-08 1.21e-07 5.97e-08 4.92e-08 1.13e-07 1.27e-07 1.44e-07 3.03e-08 1.5e-07 1.16e-07 1.1e-07 9.61e-08 1.09e-07 1.07e-07 9.7e-08 3.54e-08 3.29e-08 8.89e-08 3.36e-08 3.2e-08 4.28e-08 8.17e-08 6.76e-08 5.24e-08 3.46e-08 1.35e-07 3.4e-08 1.76e-08 5.43e-08 1.8e-08 1.22e-07 0.0 5e-08
ENSG00000162607 USP1 406475 5.59e-07 5.67e-07 1.05e-07 3.15e-07 9.72e-08 2.86e-07 5.9e-07 1.65e-07 4.3e-07 2.37e-07 9e-07 5.22e-07 6.98e-07 1.59e-07 3e-07 2.18e-07 1.17e-07 3.56e-07 2.51e-07 2.73e-07 1.91e-07 3.8e-07 3.7e-07 1.8e-07 9.82e-07 2.32e-07 4e-07 2.69e-07 3.58e-07 4.51e-07 3.1e-07 4.21e-08 8.37e-08 2.22e-07 4.15e-07 1.19e-07 2.14e-07 1.59e-07 8.26e-08 4.17e-08 2.71e-07 4.35e-07 5.65e-08 8.98e-08 8.68e-08 3.5e-08 1.27e-07 8.37e-08 5.86e-08