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Genes within 1Mb (chr1:62839848:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -753563 sc-eQTL 4.52e-01 0.0608 0.0806 0.615 B L1
ENSG00000088035 ALG6 -527727 sc-eQTL 8.80e-01 -0.0126 0.0837 0.615 B L1
ENSG00000116641 DOCK7 151462 sc-eQTL 7.55e-01 -0.0261 0.0836 0.615 B L1
ENSG00000125703 ATG4C 55716 sc-eQTL 2.73e-01 0.0637 0.058 0.615 B L1
ENSG00000142856 ITGB3BP -753873 sc-eQTL 1.75e-01 -0.125 0.0921 0.615 B L1
ENSG00000162607 USP1 403551 sc-eQTL 8.00e-01 -0.0204 0.0803 0.615 B L1
ENSG00000203965 EFCAB7 -683524 sc-eQTL 1.41e-01 -0.139 0.0943 0.615 B L1
ENSG00000079739 PGM1 -753563 sc-eQTL 9.80e-01 0.00177 0.0692 0.615 CD4T L1
ENSG00000088035 ALG6 -527727 sc-eQTL 8.63e-01 -0.0132 0.0764 0.615 CD4T L1
ENSG00000116641 DOCK7 151462 sc-eQTL 5.88e-01 0.042 0.0773 0.615 CD4T L1
ENSG00000125703 ATG4C 55716 sc-eQTL 7.84e-01 0.0171 0.0625 0.615 CD4T L1
ENSG00000142856 ITGB3BP -753873 sc-eQTL 6.40e-01 0.0415 0.0886 0.615 CD4T L1
ENSG00000162607 USP1 403551 sc-eQTL 7.80e-01 0.017 0.0606 0.615 CD4T L1
ENSG00000203965 EFCAB7 -683524 sc-eQTL 7.35e-02 0.142 0.079 0.615 CD4T L1
ENSG00000079739 PGM1 -753563 sc-eQTL 8.06e-01 0.0189 0.0768 0.615 CD8T L1
ENSG00000088035 ALG6 -527727 sc-eQTL 5.60e-01 -0.0494 0.0847 0.615 CD8T L1
ENSG00000116641 DOCK7 151462 sc-eQTL 9.27e-01 -0.00788 0.0858 0.615 CD8T L1
ENSG00000125703 ATG4C 55716 sc-eQTL 1.56e-02 0.196 0.0804 0.615 CD8T L1
ENSG00000142856 ITGB3BP -753873 sc-eQTL 8.95e-01 0.0121 0.0912 0.615 CD8T L1
ENSG00000162607 USP1 403551 sc-eQTL 7.20e-01 -0.0255 0.071 0.615 CD8T L1
ENSG00000203965 EFCAB7 -683524 sc-eQTL 5.42e-01 0.0555 0.0908 0.615 CD8T L1
ENSG00000079739 PGM1 -753563 sc-eQTL 5.78e-01 -0.0483 0.0867 0.615 DC L1
ENSG00000088035 ALG6 -527727 sc-eQTL 9.73e-01 -0.00302 0.0896 0.615 DC L1
ENSG00000116641 DOCK7 151462 sc-eQTL 9.24e-01 0.00877 0.0918 0.615 DC L1
ENSG00000125703 ATG4C 55716 sc-eQTL 7.67e-01 -0.0213 0.0718 0.615 DC L1
ENSG00000142856 ITGB3BP -753873 sc-eQTL 9.98e-01 0.000273 0.1 0.615 DC L1
ENSG00000162607 USP1 403551 sc-eQTL 7.21e-01 0.0313 0.0876 0.615 DC L1
ENSG00000203965 EFCAB7 -683524 sc-eQTL 4.34e-01 -0.0684 0.0873 0.615 DC L1
ENSG00000079739 PGM1 -753563 sc-eQTL 5.49e-01 0.05 0.0833 0.615 Mono L1
ENSG00000088035 ALG6 -527727 sc-eQTL 6.43e-02 -0.161 0.0863 0.615 Mono L1
ENSG00000116641 DOCK7 151462 sc-eQTL 3.84e-01 0.0733 0.084 0.615 Mono L1
ENSG00000125703 ATG4C 55716 sc-eQTL 2.65e-01 0.0634 0.0567 0.615 Mono L1
ENSG00000142856 ITGB3BP -753873 sc-eQTL 4.42e-01 0.0692 0.0898 0.615 Mono L1
ENSG00000162607 USP1 403551 sc-eQTL 4.98e-01 -0.0501 0.0737 0.615 Mono L1
ENSG00000240563 L1TD1 644999 sc-eQTL 2.53e-01 -0.0788 0.0687 0.615 Mono L1
ENSG00000079739 PGM1 -753563 sc-eQTL 3.99e-01 0.0609 0.0722 0.616 NK L1
ENSG00000088035 ALG6 -527727 sc-eQTL 7.74e-01 -0.0244 0.0847 0.616 NK L1
ENSG00000116641 DOCK7 151462 sc-eQTL 7.99e-02 0.122 0.0693 0.616 NK L1
ENSG00000125703 ATG4C 55716 sc-eQTL 8.24e-01 0.0167 0.075 0.616 NK L1
ENSG00000142856 ITGB3BP -753873 sc-eQTL 9.83e-01 -0.00196 0.0932 0.616 NK L1
ENSG00000162607 USP1 403551 sc-eQTL 9.77e-01 0.00237 0.0833 0.616 NK L1
ENSG00000203965 EFCAB7 -683524 sc-eQTL 7.31e-01 -0.0348 0.101 0.616 NK L1
ENSG00000079739 PGM1 -753563 sc-eQTL 2.33e-01 -0.0968 0.0809 0.615 Other_T L1
ENSG00000088035 ALG6 -527727 sc-eQTL 3.38e-01 0.0782 0.0814 0.615 Other_T L1
ENSG00000116641 DOCK7 151462 sc-eQTL 7.68e-01 0.0246 0.0833 0.615 Other_T L1
ENSG00000125703 ATG4C 55716 sc-eQTL 6.35e-03 0.195 0.0708 0.615 Other_T L1
ENSG00000142856 ITGB3BP -753873 sc-eQTL 1.78e-01 -0.086 0.0637 0.615 Other_T L1
ENSG00000162607 USP1 403551 sc-eQTL 7.89e-01 -0.0148 0.0554 0.615 Other_T L1
ENSG00000203965 EFCAB7 -683524 sc-eQTL 2.43e-01 0.115 0.0983 0.615 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -753563 sc-eQTL 7.28e-01 -0.0387 0.111 0.612 B_Activated L2
ENSG00000088035 ALG6 -527727 sc-eQTL 6.09e-01 -0.0546 0.106 0.612 B_Activated L2
ENSG00000116641 DOCK7 151462 sc-eQTL 8.16e-01 -0.0231 0.0992 0.612 B_Activated L2
ENSG00000125703 ATG4C 55716 sc-eQTL 5.25e-01 -0.0664 0.104 0.612 B_Activated L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 4.01e-02 -0.208 0.101 0.612 B_Activated L2
ENSG00000162607 USP1 403551 sc-eQTL 8.87e-01 -0.0157 0.11 0.612 B_Activated L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 5.96e-01 0.0512 0.0964 0.612 B_Activated L2
ENSG00000079739 PGM1 -753563 sc-eQTL 3.79e-01 -0.0874 0.0991 0.616 B_Intermediate L2
ENSG00000088035 ALG6 -527727 sc-eQTL 8.11e-01 -0.0242 0.101 0.616 B_Intermediate L2
ENSG00000116641 DOCK7 151462 sc-eQTL 5.63e-01 0.0557 0.0962 0.616 B_Intermediate L2
ENSG00000125703 ATG4C 55716 sc-eQTL 6.45e-01 -0.0376 0.0815 0.616 B_Intermediate L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 9.43e-01 -0.00698 0.0971 0.616 B_Intermediate L2
ENSG00000162607 USP1 403551 sc-eQTL 8.28e-01 0.0211 0.0969 0.616 B_Intermediate L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 2.78e-01 -0.104 0.0959 0.616 B_Intermediate L2
ENSG00000079739 PGM1 -753563 sc-eQTL 9.42e-01 0.00714 0.0972 0.614 B_Memory L2
ENSG00000088035 ALG6 -527727 sc-eQTL 6.99e-01 -0.0382 0.0988 0.614 B_Memory L2
ENSG00000116641 DOCK7 151462 sc-eQTL 5.02e-01 0.0622 0.0926 0.614 B_Memory L2
ENSG00000125703 ATG4C 55716 sc-eQTL 6.44e-01 -0.0407 0.088 0.614 B_Memory L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 8.31e-01 -0.0216 0.101 0.614 B_Memory L2
ENSG00000162607 USP1 403551 sc-eQTL 3.51e-01 0.0949 0.101 0.614 B_Memory L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 8.54e-01 -0.0184 0.1 0.614 B_Memory L2
ENSG00000079739 PGM1 -753563 sc-eQTL 5.04e-01 0.0649 0.0969 0.615 B_Naive1 L2
ENSG00000088035 ALG6 -527727 sc-eQTL 4.56e-01 0.0726 0.0973 0.615 B_Naive1 L2
ENSG00000116641 DOCK7 151462 sc-eQTL 2.28e-01 -0.113 0.093 0.615 B_Naive1 L2
ENSG00000125703 ATG4C 55716 sc-eQTL 3.63e-02 0.15 0.0712 0.615 B_Naive1 L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 2.80e-01 -0.103 0.0951 0.615 B_Naive1 L2
ENSG00000162607 USP1 403551 sc-eQTL 2.21e-01 -0.103 0.0836 0.615 B_Naive1 L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 1.45e-01 -0.148 0.101 0.615 B_Naive1 L2
ENSG00000079739 PGM1 -753563 sc-eQTL 2.41e-01 0.113 0.0962 0.616 B_Naive2 L2
ENSG00000088035 ALG6 -527727 sc-eQTL 5.20e-01 -0.0647 0.101 0.616 B_Naive2 L2
ENSG00000116641 DOCK7 151462 sc-eQTL 6.95e-01 0.038 0.0967 0.616 B_Naive2 L2
ENSG00000125703 ATG4C 55716 sc-eQTL 7.73e-01 0.0269 0.0931 0.616 B_Naive2 L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 7.73e-01 -0.0291 0.101 0.616 B_Naive2 L2
ENSG00000162607 USP1 403551 sc-eQTL 7.14e-01 -0.0353 0.0961 0.616 B_Naive2 L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 8.34e-01 -0.021 0.1 0.616 B_Naive2 L2
ENSG00000079739 PGM1 -753563 sc-eQTL 4.40e-02 -0.195 0.0964 0.609 CD4_CTL L2
ENSG00000088035 ALG6 -527727 sc-eQTL 9.35e-01 0.00843 0.103 0.609 CD4_CTL L2
ENSG00000116641 DOCK7 151462 sc-eQTL 1.34e-01 0.135 0.0895 0.609 CD4_CTL L2
ENSG00000125703 ATG4C 55716 sc-eQTL 6.26e-01 0.0454 0.0931 0.609 CD4_CTL L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 5.58e-02 0.19 0.0987 0.609 CD4_CTL L2
ENSG00000162607 USP1 403551 sc-eQTL 9.25e-01 0.00897 0.0948 0.609 CD4_CTL L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 1.83e-01 -0.126 0.0942 0.609 CD4_CTL L2
ENSG00000079739 PGM1 -753563 sc-eQTL 6.50e-01 0.0353 0.0775 0.615 CD4_Naive L2
ENSG00000088035 ALG6 -527727 sc-eQTL 4.83e-01 0.0591 0.0842 0.615 CD4_Naive L2
ENSG00000116641 DOCK7 151462 sc-eQTL 7.33e-01 -0.0283 0.0828 0.615 CD4_Naive L2
ENSG00000125703 ATG4C 55716 sc-eQTL 8.10e-01 -0.0177 0.0732 0.615 CD4_Naive L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 6.18e-01 -0.0447 0.0894 0.615 CD4_Naive L2
ENSG00000162607 USP1 403551 sc-eQTL 4.22e-01 0.0549 0.0683 0.615 CD4_Naive L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 1.17e-02 0.223 0.0875 0.615 CD4_Naive L2
ENSG00000079739 PGM1 -753563 sc-eQTL 7.15e-01 0.0296 0.0811 0.615 CD4_TCM L2
ENSG00000088035 ALG6 -527727 sc-eQTL 5.40e-02 -0.181 0.0934 0.615 CD4_TCM L2
ENSG00000116641 DOCK7 151462 sc-eQTL 8.79e-01 -0.0128 0.0835 0.615 CD4_TCM L2
ENSG00000125703 ATG4C 55716 sc-eQTL 6.59e-01 0.0359 0.0813 0.615 CD4_TCM L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 2.51e-01 0.11 0.0955 0.615 CD4_TCM L2
ENSG00000162607 USP1 403551 sc-eQTL 6.58e-01 -0.0348 0.0786 0.615 CD4_TCM L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 3.26e-01 0.0912 0.0925 0.615 CD4_TCM L2
ENSG00000079739 PGM1 -753563 sc-eQTL 8.89e-01 0.0134 0.0955 0.615 CD4_TEM L2
ENSG00000088035 ALG6 -527727 sc-eQTL 3.01e-01 -0.0994 0.0958 0.615 CD4_TEM L2
ENSG00000116641 DOCK7 151462 sc-eQTL 9.66e-01 0.004 0.0936 0.615 CD4_TEM L2
ENSG00000125703 ATG4C 55716 sc-eQTL 4.64e-01 0.0666 0.0908 0.615 CD4_TEM L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 8.15e-01 0.022 0.0938 0.615 CD4_TEM L2
ENSG00000162607 USP1 403551 sc-eQTL 5.97e-01 0.047 0.0888 0.615 CD4_TEM L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 3.00e-01 -0.101 0.097 0.615 CD4_TEM L2
ENSG00000079739 PGM1 -753563 sc-eQTL 1.64e-01 0.122 0.087 0.615 CD8_CTL L2
ENSG00000088035 ALG6 -527727 sc-eQTL 3.24e-01 -0.0917 0.0927 0.615 CD8_CTL L2
ENSG00000116641 DOCK7 151462 sc-eQTL 1.91e-01 0.115 0.0879 0.615 CD8_CTL L2
ENSG00000125703 ATG4C 55716 sc-eQTL 2.17e-02 0.214 0.0927 0.615 CD8_CTL L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 6.48e-01 -0.0446 0.0976 0.615 CD8_CTL L2
ENSG00000162607 USP1 403551 sc-eQTL 6.26e-01 0.0426 0.0874 0.615 CD8_CTL L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 3.31e-01 0.0972 0.0998 0.615 CD8_CTL L2
ENSG00000079739 PGM1 -753563 sc-eQTL 7.96e-01 0.023 0.089 0.615 CD8_Naive L2
ENSG00000088035 ALG6 -527727 sc-eQTL 2.99e-01 -0.0958 0.092 0.615 CD8_Naive L2
ENSG00000116641 DOCK7 151462 sc-eQTL 3.13e-02 -0.204 0.0943 0.615 CD8_Naive L2
ENSG00000125703 ATG4C 55716 sc-eQTL 1.37e-01 0.136 0.091 0.615 CD8_Naive L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 7.36e-01 0.0313 0.0926 0.615 CD8_Naive L2
ENSG00000162607 USP1 403551 sc-eQTL 9.06e-01 0.00928 0.0783 0.615 CD8_Naive L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 5.34e-01 0.0543 0.0873 0.615 CD8_Naive L2
ENSG00000079739 PGM1 -753563 sc-eQTL 8.37e-03 -0.261 0.098 0.613 CD8_TCM L2
ENSG00000088035 ALG6 -527727 sc-eQTL 1.62e-01 0.141 0.1 0.613 CD8_TCM L2
ENSG00000116641 DOCK7 151462 sc-eQTL 7.85e-01 0.027 0.0985 0.613 CD8_TCM L2
ENSG00000125703 ATG4C 55716 sc-eQTL 8.66e-01 -0.0171 0.101 0.613 CD8_TCM L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.75e-01 0.0869 0.0978 0.613 CD8_TCM L2
ENSG00000162607 USP1 403551 sc-eQTL 9.47e-01 0.0063 0.0943 0.613 CD8_TCM L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 2.07e-02 0.23 0.0985 0.613 CD8_TCM L2
ENSG00000079739 PGM1 -753563 sc-eQTL 5.02e-01 0.0685 0.102 0.621 CD8_TEM L2
ENSG00000088035 ALG6 -527727 sc-eQTL 3.06e-02 0.22 0.101 0.621 CD8_TEM L2
ENSG00000116641 DOCK7 151462 sc-eQTL 8.65e-01 0.0169 0.0991 0.621 CD8_TEM L2
ENSG00000125703 ATG4C 55716 sc-eQTL 4.19e-02 0.193 0.0943 0.621 CD8_TEM L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 6.56e-01 0.046 0.103 0.621 CD8_TEM L2
ENSG00000162607 USP1 403551 sc-eQTL 3.28e-01 -0.0963 0.0982 0.621 CD8_TEM L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 9.64e-01 -0.00452 0.1 0.621 CD8_TEM L2
ENSG00000079739 PGM1 -753563 sc-eQTL 1.37e-01 -0.139 0.0932 0.613 MAIT L2
ENSG00000088035 ALG6 -527727 sc-eQTL 7.70e-01 0.0271 0.0927 0.613 MAIT L2
ENSG00000116641 DOCK7 151462 sc-eQTL 9.03e-01 -0.0109 0.0888 0.613 MAIT L2
ENSG00000125703 ATG4C 55716 sc-eQTL 4.30e-02 0.189 0.0927 0.613 MAIT L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 5.13e-01 -0.0614 0.0937 0.613 MAIT L2
ENSG00000162607 USP1 403551 sc-eQTL 3.60e-01 0.0852 0.0929 0.613 MAIT L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 2.51e-01 0.111 0.0963 0.613 MAIT L2
ENSG00000079739 PGM1 -753563 sc-eQTL 6.64e-01 -0.0413 0.095 0.613 NK_CD56bright L2
ENSG00000088035 ALG6 -527727 sc-eQTL 7.48e-01 -0.0314 0.0974 0.613 NK_CD56bright L2
ENSG00000116641 DOCK7 151462 sc-eQTL 2.77e-01 -0.0917 0.0841 0.613 NK_CD56bright L2
ENSG00000125703 ATG4C 55716 sc-eQTL 4.65e-01 -0.069 0.0942 0.613 NK_CD56bright L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 9.35e-01 -0.008 0.0982 0.613 NK_CD56bright L2
ENSG00000162607 USP1 403551 sc-eQTL 4.90e-01 0.07 0.101 0.613 NK_CD56bright L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 1.62e-01 -0.135 0.0964 0.613 NK_CD56bright L2
ENSG00000079739 PGM1 -753563 sc-eQTL 4.31e-01 -0.0591 0.075 0.614 NK_CD56dim L2
ENSG00000088035 ALG6 -527727 sc-eQTL 4.19e-01 -0.077 0.0951 0.614 NK_CD56dim L2
ENSG00000116641 DOCK7 151462 sc-eQTL 1.52e-01 0.118 0.0825 0.614 NK_CD56dim L2
ENSG00000125703 ATG4C 55716 sc-eQTL 5.75e-01 -0.0472 0.0841 0.614 NK_CD56dim L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 6.22e-01 -0.0473 0.0957 0.614 NK_CD56dim L2
ENSG00000162607 USP1 403551 sc-eQTL 9.31e-01 0.00808 0.0929 0.614 NK_CD56dim L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 8.63e-01 0.0179 0.103 0.614 NK_CD56dim L2
ENSG00000079739 PGM1 -753563 sc-eQTL 3.34e-01 0.0973 0.101 0.619 NK_HLA L2
ENSG00000088035 ALG6 -527727 sc-eQTL 3.29e-01 -0.102 0.104 0.619 NK_HLA L2
ENSG00000116641 DOCK7 151462 sc-eQTL 8.05e-01 0.0197 0.0799 0.619 NK_HLA L2
ENSG00000125703 ATG4C 55716 sc-eQTL 1.29e-01 0.141 0.0924 0.619 NK_HLA L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 9.91e-01 0.00109 0.0976 0.619 NK_HLA L2
ENSG00000162607 USP1 403551 sc-eQTL 8.08e-01 0.0248 0.102 0.619 NK_HLA L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 5.50e-01 0.0556 0.0928 0.619 NK_HLA L2
ENSG00000079739 PGM1 -753563 sc-eQTL 1.80e-01 0.109 0.0809 0.614 NK_cytokine L2
ENSG00000088035 ALG6 -527727 sc-eQTL 6.76e-02 0.167 0.0911 0.614 NK_cytokine L2
ENSG00000116641 DOCK7 151462 sc-eQTL 1.60e-01 0.119 0.0846 0.614 NK_cytokine L2
ENSG00000125703 ATG4C 55716 sc-eQTL 4.88e-01 0.0604 0.0869 0.614 NK_cytokine L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 7.75e-01 -0.0258 0.0901 0.614 NK_cytokine L2
ENSG00000162607 USP1 403551 sc-eQTL 9.35e-01 0.0077 0.0947 0.614 NK_cytokine L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 4.85e-01 0.067 0.0959 0.614 NK_cytokine L2
ENSG00000079739 PGM1 -753563 sc-eQTL 9.22e-01 -0.0107 0.11 0.619 PB L2
ENSG00000088035 ALG6 -527727 sc-eQTL 9.08e-01 0.0134 0.116 0.619 PB L2
ENSG00000116641 DOCK7 151462 sc-eQTL 8.58e-01 -0.0222 0.124 0.619 PB L2
ENSG00000125703 ATG4C 55716 sc-eQTL 2.96e-01 0.113 0.107 0.619 PB L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 7.31e-01 -0.0371 0.108 0.619 PB L2
ENSG00000162607 USP1 403551 sc-eQTL 8.53e-01 0.0199 0.107 0.619 PB L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 8.36e-01 0.0245 0.118 0.619 PB L2
ENSG00000079739 PGM1 -753563 sc-eQTL 9.47e-01 0.00578 0.0875 0.615 Pro_T L2
ENSG00000088035 ALG6 -527727 sc-eQTL 9.12e-01 -0.0098 0.0891 0.615 Pro_T L2
ENSG00000116641 DOCK7 151462 sc-eQTL 3.71e-01 0.0799 0.0892 0.615 Pro_T L2
ENSG00000125703 ATG4C 55716 sc-eQTL 9.55e-01 0.00443 0.0782 0.615 Pro_T L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.02e-02 -0.169 0.0776 0.615 Pro_T L2
ENSG00000162607 USP1 403551 sc-eQTL 6.69e-01 0.0231 0.0539 0.615 Pro_T L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 1.65e-01 0.127 0.0908 0.615 Pro_T L2
ENSG00000079739 PGM1 -753563 sc-eQTL 8.91e-01 0.0128 0.0927 0.615 Treg L2
ENSG00000088035 ALG6 -527727 sc-eQTL 7.53e-01 0.0313 0.0991 0.615 Treg L2
ENSG00000116641 DOCK7 151462 sc-eQTL 4.58e-01 0.0676 0.0909 0.615 Treg L2
ENSG00000125703 ATG4C 55716 sc-eQTL 5.97e-01 0.0492 0.093 0.615 Treg L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 2.72e-01 0.107 0.097 0.615 Treg L2
ENSG00000162607 USP1 403551 sc-eQTL 5.88e-01 -0.051 0.0941 0.615 Treg L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 6.63e-01 -0.0406 0.0931 0.615 Treg L2
ENSG00000079739 PGM1 -753563 sc-eQTL 4.04e-01 -0.0774 0.0925 0.61 cDC L2
ENSG00000088035 ALG6 -527727 sc-eQTL 7.61e-02 -0.166 0.0931 0.61 cDC L2
ENSG00000116641 DOCK7 151462 sc-eQTL 4.95e-01 0.063 0.0921 0.61 cDC L2
ENSG00000125703 ATG4C 55716 sc-eQTL 4.74e-01 -0.0573 0.0799 0.61 cDC L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.90e-01 0.0872 0.101 0.61 cDC L2
ENSG00000162607 USP1 403551 sc-eQTL 7.18e-01 0.0327 0.0903 0.61 cDC L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 9.82e-01 0.00187 0.0815 0.61 cDC L2
ENSG00000079739 PGM1 -753563 sc-eQTL 2.48e-01 0.0998 0.0862 0.615 cMono_IL1B L2
ENSG00000088035 ALG6 -527727 sc-eQTL 5.86e-02 -0.163 0.0858 0.615 cMono_IL1B L2
ENSG00000116641 DOCK7 151462 sc-eQTL 6.24e-01 0.0448 0.0912 0.615 cMono_IL1B L2
ENSG00000125703 ATG4C 55716 sc-eQTL 3.70e-01 0.0576 0.0641 0.615 cMono_IL1B L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.91e-01 0.078 0.0908 0.615 cMono_IL1B L2
ENSG00000162607 USP1 403551 sc-eQTL 8.54e-01 -0.0148 0.0802 0.615 cMono_IL1B L2
ENSG00000240563 L1TD1 644999 sc-eQTL 6.74e-01 -0.034 0.0805 0.615 cMono_IL1B L2
ENSG00000079739 PGM1 -753563 sc-eQTL 6.20e-01 0.0474 0.0954 0.615 cMono_S100A L2
ENSG00000088035 ALG6 -527727 sc-eQTL 1.56e-01 -0.137 0.0963 0.615 cMono_S100A L2
ENSG00000116641 DOCK7 151462 sc-eQTL 6.93e-01 0.0354 0.0897 0.615 cMono_S100A L2
ENSG00000125703 ATG4C 55716 sc-eQTL 7.73e-01 0.0224 0.0777 0.615 cMono_S100A L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.59e-01 0.0805 0.0875 0.615 cMono_S100A L2
ENSG00000162607 USP1 403551 sc-eQTL 5.32e-01 -0.0564 0.0901 0.615 cMono_S100A L2
ENSG00000240563 L1TD1 644999 sc-eQTL 3.28e-01 0.0734 0.0749 0.615 cMono_S100A L2
ENSG00000079739 PGM1 -753563 sc-eQTL 3.73e-01 -0.0969 0.109 0.615 gdT L2
ENSG00000088035 ALG6 -527727 sc-eQTL 3.70e-01 -0.104 0.116 0.615 gdT L2
ENSG00000116641 DOCK7 151462 sc-eQTL 3.85e-01 0.0989 0.114 0.615 gdT L2
ENSG00000125703 ATG4C 55716 sc-eQTL 5.67e-01 -0.0623 0.109 0.615 gdT L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.38e-01 -0.111 0.115 0.615 gdT L2
ENSG00000162607 USP1 403551 sc-eQTL 1.62e-01 -0.153 0.109 0.615 gdT L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 8.10e-01 0.0274 0.114 0.615 gdT L2
ENSG00000079739 PGM1 -753563 sc-eQTL 6.45e-01 0.0439 0.0951 0.618 intMono L2
ENSG00000088035 ALG6 -527727 sc-eQTL 4.91e-01 0.0611 0.0886 0.618 intMono L2
ENSG00000116641 DOCK7 151462 sc-eQTL 3.55e-01 0.0838 0.0904 0.618 intMono L2
ENSG00000125703 ATG4C 55716 sc-eQTL 6.47e-01 -0.0397 0.0864 0.618 intMono L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 5.49e-01 0.0572 0.0951 0.618 intMono L2
ENSG00000162607 USP1 403551 sc-eQTL 6.20e-01 -0.048 0.0968 0.618 intMono L2
ENSG00000240563 L1TD1 644999 sc-eQTL 2.52e-01 -0.0815 0.071 0.618 intMono L2
ENSG00000079739 PGM1 -753563 sc-eQTL 5.18e-01 -0.057 0.0879 0.62 ncMono L2
ENSG00000088035 ALG6 -527727 sc-eQTL 3.81e-01 0.0847 0.0965 0.62 ncMono L2
ENSG00000116641 DOCK7 151462 sc-eQTL 7.30e-01 -0.0328 0.0951 0.62 ncMono L2
ENSG00000125703 ATG4C 55716 sc-eQTL 3.95e-01 0.0756 0.0887 0.62 ncMono L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 8.21e-01 0.0211 0.093 0.62 ncMono L2
ENSG00000162607 USP1 403551 sc-eQTL 8.17e-01 -0.022 0.095 0.62 ncMono L2
ENSG00000240563 L1TD1 644999 sc-eQTL 3.52e-01 -0.0628 0.0672 0.62 ncMono L2
ENSG00000079739 PGM1 -753563 sc-eQTL 9.09e-01 -0.0123 0.107 0.616 pDC L2
ENSG00000088035 ALG6 -527727 sc-eQTL 6.97e-02 0.188 0.103 0.616 pDC L2
ENSG00000116641 DOCK7 151462 sc-eQTL 6.58e-01 -0.0471 0.106 0.616 pDC L2
ENSG00000125703 ATG4C 55716 sc-eQTL 3.48e-01 0.0895 0.0952 0.616 pDC L2
ENSG00000142856 ITGB3BP -753873 sc-eQTL 8.04e-02 -0.187 0.106 0.616 pDC L2
ENSG00000162607 USP1 403551 sc-eQTL 3.60e-01 0.0999 0.109 0.616 pDC L2
ENSG00000203965 EFCAB7 -683524 sc-eQTL 6.16e-01 -0.0476 0.0948 0.616 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -753563 sc-eQTL 4.51e-01 -0.0692 0.0916 0.615 B_Memory LOneK1K
ENSG00000088035 ALG6 -527727 sc-eQTL 4.41e-01 -0.0781 0.101 0.615 B_Memory LOneK1K
ENSG00000116641 DOCK7 151462 sc-eQTL 1.62e-01 0.123 0.0876 0.615 B_Memory LOneK1K
ENSG00000125703 ATG4C 55716 sc-eQTL 5.26e-01 -0.0452 0.0711 0.615 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.05e-01 -0.0959 0.0933 0.615 B_Memory LOneK1K
ENSG00000162607 USP1 403551 sc-eQTL 4.50e-01 0.0687 0.0907 0.615 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -683524 sc-eQTL 3.67e-01 -0.0879 0.0973 0.615 B_Memory LOneK1K
ENSG00000079739 PGM1 -753563 sc-eQTL 2.95e-01 0.0985 0.0939 0.615 B_Naive LOneK1K
ENSG00000088035 ALG6 -527727 sc-eQTL 6.52e-01 0.0437 0.0969 0.615 B_Naive LOneK1K
ENSG00000116641 DOCK7 151462 sc-eQTL 5.74e-01 -0.0509 0.0904 0.615 B_Naive LOneK1K
ENSG00000125703 ATG4C 55716 sc-eQTL 1.70e-02 0.164 0.0681 0.615 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -753873 sc-eQTL 3.11e-01 -0.0988 0.0974 0.615 B_Naive LOneK1K
ENSG00000162607 USP1 403551 sc-eQTL 3.18e-01 -0.0837 0.0837 0.615 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -683524 sc-eQTL 2.52e-01 -0.112 0.0978 0.615 B_Naive LOneK1K
ENSG00000079739 PGM1 -753563 sc-eQTL 4.58e-01 0.0653 0.0879 0.615 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -527727 sc-eQTL 3.14e-02 -0.183 0.0843 0.615 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 151462 sc-eQTL 5.50e-01 0.0514 0.0857 0.615 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 55716 sc-eQTL 2.76e-01 0.0646 0.0591 0.615 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -753873 sc-eQTL 2.62e-01 0.0983 0.0875 0.615 CD14_Mono LOneK1K
ENSG00000162607 USP1 403551 sc-eQTL 4.15e-01 -0.0611 0.0748 0.615 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 644999 sc-eQTL 8.08e-01 0.0197 0.0812 0.615 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -753563 sc-eQTL 7.46e-01 0.0273 0.0843 0.616 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -527727 sc-eQTL 2.38e-01 0.113 0.0955 0.616 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 151462 sc-eQTL 6.94e-01 0.0373 0.0947 0.616 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 55716 sc-eQTL 9.34e-01 0.00666 0.0808 0.616 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -753873 sc-eQTL 5.25e-01 0.0597 0.0937 0.616 CD16_Mono LOneK1K
ENSG00000162607 USP1 403551 sc-eQTL 5.06e-01 -0.0587 0.088 0.616 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 644999 sc-eQTL 5.29e-02 -0.116 0.0596 0.616 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -753563 sc-eQTL 4.55e-01 0.0549 0.0734 0.614 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -527727 sc-eQTL 9.95e-01 -0.000534 0.0882 0.614 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 151462 sc-eQTL 3.83e-02 0.163 0.0782 0.614 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 55716 sc-eQTL 9.86e-01 0.00138 0.0789 0.614 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -753873 sc-eQTL 9.31e-01 -0.00813 0.0935 0.614 NK_CD56dim LOneK1K
ENSG00000162607 USP1 403551 sc-eQTL 6.45e-01 -0.0391 0.0848 0.614 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -683524 sc-eQTL 7.01e-01 0.0397 0.103 0.614 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 151480 eQTL 3.25e-07 0.115 0.0224 0.0 0.0 0.35
ENSG00000125703 ATG4C 55716 eQTL 5.73e-06 0.0777 0.017 0.0146 0.0142 0.35
ENSG00000132855 ANGPTL3 242361 pQTL 0.0175 0.0715 0.0301 0.0 0.0 0.356
ENSG00000142856 ITGB3BP -753873 eQTL 0.00394 -0.0864 0.0299 0.0 0.0 0.35
ENSG00000162607 USP1 403551 eQTL 0.000819 0.044 0.0131 0.0 0.0 0.35

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 151480 3.88e-06 3.92e-06 6.03e-07 2.04e-06 8.7e-07 8.1e-07 2.49e-06 1.03e-06 2.51e-06 1.57e-06 3.27e-06 1.95e-06 4.9e-06 1.24e-06 9.15e-07 1.99e-06 1.58e-06 2.09e-06 1.6e-06 1.17e-06 1.68e-06 3.38e-06 3.17e-06 1.62e-06 4.62e-06 1.21e-06 1.84e-06 1.69e-06 3.19e-06 2.57e-06 1.97e-06 4.54e-07 5.97e-07 1.61e-06 1.91e-06 9.54e-07 8.74e-07 4.37e-07 1.26e-06 3.27e-07 2.79e-07 4.1e-06 4.62e-07 1.81e-07 3.69e-07 3.64e-07 9e-07 2.38e-07 1.77e-07
ENSG00000125703 ATG4C 55716 8.88e-06 9.74e-06 1.35e-06 5.54e-06 2.38e-06 4.2e-06 1.01e-05 2.04e-06 8.22e-06 5.05e-06 1.17e-05 5.09e-06 1.32e-05 3.85e-06 2.33e-06 6.38e-06 3.7e-06 7.04e-06 2.47e-06 2.8e-06 4.74e-06 8.15e-06 7.18e-06 3.21e-06 1.31e-05 3.74e-06 4.7e-06 3.43e-06 8.87e-06 7.79e-06 5.04e-06 8.78e-07 1.07e-06 3e-06 4.48e-06 2.49e-06 1.73e-06 1.94e-06 1.57e-06 1.02e-06 1.01e-06 1.2e-05 1.39e-06 1.32e-07 8.13e-07 1.68e-06 1.25e-06 7.51e-07 4.49e-07
ENSG00000142856 ITGB3BP -753873 2.8e-07 1.33e-07 6.04e-08 2.2e-07 9.8e-08 8.21e-08 1.73e-07 5.85e-08 1.5e-07 6.4e-08 1.73e-07 1.08e-07 1.71e-07 7.95e-08 5.72e-08 7.74e-08 4.18e-08 1.51e-07 6.92e-08 5.04e-08 1.27e-07 1.26e-07 1.58e-07 2.83e-08 1.72e-07 1.22e-07 1.17e-07 1.01e-07 1.24e-07 1.03e-07 1.08e-07 3.99e-08 3.43e-08 9.52e-08 3.51e-08 3.07e-08 5.35e-08 7.63e-08 6.41e-08 3.75e-08 5.48e-08 1.46e-07 4.76e-08 1.08e-08 2.64e-08 1.68e-08 1e-07 1.98e-09 4.81e-08
ENSG00000162607 USP1 403551 9.83e-07 6.99e-07 1.63e-07 3.25e-07 1.11e-07 3.15e-07 6.08e-07 2.06e-07 6.18e-07 2.98e-07 9.46e-07 4.43e-07 9.65e-07 1.56e-07 3.15e-07 2.99e-07 4.54e-07 4.33e-07 2.79e-07 1.78e-07 2.49e-07 4.99e-07 4.13e-07 2.49e-07 1.2e-06 2.57e-07 4.62e-07 2.83e-07 4.76e-07 7.06e-07 3.68e-07 4.06e-08 5.71e-08 2.08e-07 3.26e-07 1.82e-07 1.82e-07 1.42e-07 8.72e-08 1.61e-08 1.16e-07 6.81e-07 6.3e-08 1.92e-08 2.03e-07 3.87e-08 1.08e-07 5.73e-08 5.94e-08