logo

Genes within 1Mb (chr1:62829519:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -763892 sc-eQTL 3.04e-01 0.0814 0.079 0.607 B L1
ENSG00000088035 ALG6 -538056 sc-eQTL 8.29e-01 0.0177 0.082 0.607 B L1
ENSG00000116641 DOCK7 141133 sc-eQTL 8.00e-01 -0.0208 0.082 0.607 B L1
ENSG00000125703 ATG4C 45387 sc-eQTL 2.23e-01 0.0694 0.0568 0.607 B L1
ENSG00000142856 ITGB3BP -764202 sc-eQTL 2.07e-01 -0.114 0.0904 0.607 B L1
ENSG00000162607 USP1 393222 sc-eQTL 7.86e-01 -0.0214 0.0788 0.607 B L1
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.22e-01 -0.144 0.0925 0.607 B L1
ENSG00000079739 PGM1 -763892 sc-eQTL 7.43e-01 -0.0223 0.0679 0.607 CD4T L1
ENSG00000088035 ALG6 -538056 sc-eQTL 9.23e-01 -0.00729 0.075 0.607 CD4T L1
ENSG00000116641 DOCK7 141133 sc-eQTL 7.50e-01 0.0242 0.0759 0.607 CD4T L1
ENSG00000125703 ATG4C 45387 sc-eQTL 9.15e-01 -0.00657 0.0613 0.607 CD4T L1
ENSG00000142856 ITGB3BP -764202 sc-eQTL 5.32e-01 0.0544 0.0869 0.607 CD4T L1
ENSG00000162607 USP1 393222 sc-eQTL 6.41e-01 0.0278 0.0594 0.607 CD4T L1
ENSG00000203965 EFCAB7 -693853 sc-eQTL 9.06e-02 0.132 0.0776 0.607 CD4T L1
ENSG00000079739 PGM1 -763892 sc-eQTL 7.16e-01 0.0275 0.0755 0.607 CD8T L1
ENSG00000088035 ALG6 -538056 sc-eQTL 5.85e-01 -0.0454 0.0832 0.607 CD8T L1
ENSG00000116641 DOCK7 141133 sc-eQTL 8.52e-01 -0.0158 0.0843 0.607 CD8T L1
ENSG00000125703 ATG4C 45387 sc-eQTL 9.92e-03 0.205 0.0788 0.607 CD8T L1
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.77e-01 0.0139 0.0896 0.607 CD8T L1
ENSG00000162607 USP1 393222 sc-eQTL 5.31e-01 -0.0437 0.0697 0.607 CD8T L1
ENSG00000203965 EFCAB7 -693853 sc-eQTL 4.21e-01 0.0718 0.0891 0.607 CD8T L1
ENSG00000079739 PGM1 -763892 sc-eQTL 6.38e-01 -0.0398 0.0845 0.606 DC L1
ENSG00000088035 ALG6 -538056 sc-eQTL 9.79e-01 0.00229 0.0873 0.606 DC L1
ENSG00000116641 DOCK7 141133 sc-eQTL 8.49e-01 0.0171 0.0894 0.606 DC L1
ENSG00000125703 ATG4C 45387 sc-eQTL 9.12e-01 -0.00775 0.07 0.606 DC L1
ENSG00000142856 ITGB3BP -764202 sc-eQTL 9.12e-01 -0.0108 0.0978 0.606 DC L1
ENSG00000162607 USP1 393222 sc-eQTL 7.03e-01 0.0326 0.0854 0.606 DC L1
ENSG00000203965 EFCAB7 -693853 sc-eQTL 5.65e-01 -0.049 0.0851 0.606 DC L1
ENSG00000079739 PGM1 -763892 sc-eQTL 5.07e-01 0.0544 0.0818 0.607 Mono L1
ENSG00000088035 ALG6 -538056 sc-eQTL 7.89e-02 -0.15 0.0848 0.607 Mono L1
ENSG00000116641 DOCK7 141133 sc-eQTL 5.98e-01 0.0436 0.0826 0.607 Mono L1
ENSG00000125703 ATG4C 45387 sc-eQTL 2.74e-01 0.0611 0.0557 0.607 Mono L1
ENSG00000142856 ITGB3BP -764202 sc-eQTL 5.09e-01 0.0583 0.0881 0.607 Mono L1
ENSG00000162607 USP1 393222 sc-eQTL 3.26e-01 -0.0712 0.0723 0.607 Mono L1
ENSG00000240563 L1TD1 634670 sc-eQTL 3.90e-01 -0.0581 0.0675 0.607 Mono L1
ENSG00000079739 PGM1 -763892 sc-eQTL 2.67e-01 0.0782 0.0703 0.607 NK L1
ENSG00000088035 ALG6 -538056 sc-eQTL 7.80e-01 -0.0232 0.0827 0.607 NK L1
ENSG00000116641 DOCK7 141133 sc-eQTL 9.29e-02 0.114 0.0677 0.607 NK L1
ENSG00000125703 ATG4C 45387 sc-eQTL 8.94e-01 0.00972 0.0732 0.607 NK L1
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.98e-01 -0.0117 0.0909 0.607 NK L1
ENSG00000162607 USP1 393222 sc-eQTL 9.01e-01 0.0101 0.0813 0.607 NK L1
ENSG00000203965 EFCAB7 -693853 sc-eQTL 7.96e-01 -0.0256 0.0987 0.607 NK L1
ENSG00000079739 PGM1 -763892 sc-eQTL 1.81e-01 -0.107 0.08 0.607 Other_T L1
ENSG00000088035 ALG6 -538056 sc-eQTL 3.74e-01 0.0717 0.0805 0.607 Other_T L1
ENSG00000116641 DOCK7 141133 sc-eQTL 9.52e-01 0.00499 0.0824 0.607 Other_T L1
ENSG00000125703 ATG4C 45387 sc-eQTL 3.31e-03 0.208 0.0699 0.607 Other_T L1
ENSG00000142856 ITGB3BP -764202 sc-eQTL 2.22e-01 -0.0772 0.063 0.607 Other_T L1
ENSG00000162607 USP1 393222 sc-eQTL 7.38e-01 -0.0184 0.0548 0.607 Other_T L1
ENSG00000203965 EFCAB7 -693853 sc-eQTL 2.39e-01 0.115 0.0972 0.607 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -763892 sc-eQTL 6.64e-01 -0.0473 0.109 0.602 B_Activated L2
ENSG00000088035 ALG6 -538056 sc-eQTL 5.08e-01 -0.069 0.104 0.602 B_Activated L2
ENSG00000116641 DOCK7 141133 sc-eQTL 9.94e-01 -0.0007 0.097 0.602 B_Activated L2
ENSG00000125703 ATG4C 45387 sc-eQTL 5.04e-01 -0.0682 0.102 0.602 B_Activated L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 5.22e-02 -0.193 0.0986 0.602 B_Activated L2
ENSG00000162607 USP1 393222 sc-eQTL 8.19e-01 -0.0248 0.108 0.602 B_Activated L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 5.61e-01 0.0549 0.0942 0.602 B_Activated L2
ENSG00000079739 PGM1 -763892 sc-eQTL 5.85e-01 -0.0532 0.0974 0.607 B_Intermediate L2
ENSG00000088035 ALG6 -538056 sc-eQTL 8.42e-01 -0.0197 0.099 0.607 B_Intermediate L2
ENSG00000116641 DOCK7 141133 sc-eQTL 5.39e-01 0.0581 0.0944 0.607 B_Intermediate L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.32e-01 -0.0383 0.08 0.607 B_Intermediate L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.45e-01 0.0187 0.0953 0.607 B_Intermediate L2
ENSG00000162607 USP1 393222 sc-eQTL 5.59e-01 0.0556 0.0951 0.607 B_Intermediate L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.82e-01 -0.126 0.094 0.607 B_Intermediate L2
ENSG00000079739 PGM1 -763892 sc-eQTL 9.57e-01 -0.00516 0.0952 0.606 B_Memory L2
ENSG00000088035 ALG6 -538056 sc-eQTL 5.11e-01 -0.0636 0.0966 0.606 B_Memory L2
ENSG00000116641 DOCK7 141133 sc-eQTL 7.48e-01 0.0292 0.0907 0.606 B_Memory L2
ENSG00000125703 ATG4C 45387 sc-eQTL 3.82e-01 -0.0753 0.0861 0.606 B_Memory L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.70e-01 -0.0162 0.0987 0.606 B_Memory L2
ENSG00000162607 USP1 393222 sc-eQTL 2.39e-01 0.117 0.0992 0.606 B_Memory L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 4.73e-01 -0.0704 0.0978 0.606 B_Memory L2
ENSG00000079739 PGM1 -763892 sc-eQTL 3.88e-01 0.0821 0.095 0.607 B_Naive1 L2
ENSG00000088035 ALG6 -538056 sc-eQTL 2.24e-01 0.116 0.0952 0.607 B_Naive1 L2
ENSG00000116641 DOCK7 141133 sc-eQTL 3.18e-01 -0.0914 0.0913 0.607 B_Naive1 L2
ENSG00000125703 ATG4C 45387 sc-eQTL 2.84e-02 0.154 0.0697 0.607 B_Naive1 L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 3.15e-01 -0.0939 0.0933 0.607 B_Naive1 L2
ENSG00000162607 USP1 393222 sc-eQTL 1.19e-01 -0.128 0.0818 0.607 B_Naive1 L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.29e-01 -0.151 0.0992 0.607 B_Naive1 L2
ENSG00000079739 PGM1 -763892 sc-eQTL 1.73e-01 0.129 0.0941 0.607 B_Naive2 L2
ENSG00000088035 ALG6 -538056 sc-eQTL 6.40e-01 -0.0462 0.0985 0.607 B_Naive2 L2
ENSG00000116641 DOCK7 141133 sc-eQTL 8.07e-01 0.0231 0.0947 0.607 B_Naive2 L2
ENSG00000125703 ATG4C 45387 sc-eQTL 4.69e-01 0.066 0.0911 0.607 B_Naive2 L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.94e-01 -0.0132 0.0989 0.607 B_Naive2 L2
ENSG00000162607 USP1 393222 sc-eQTL 7.40e-01 -0.0312 0.0941 0.607 B_Naive2 L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 8.87e-01 -0.014 0.0984 0.607 B_Naive2 L2
ENSG00000079739 PGM1 -763892 sc-eQTL 6.31e-02 -0.177 0.0946 0.602 CD4_CTL L2
ENSG00000088035 ALG6 -538056 sc-eQTL 6.72e-01 0.0428 0.101 0.602 CD4_CTL L2
ENSG00000116641 DOCK7 141133 sc-eQTL 1.11e-01 0.14 0.0877 0.602 CD4_CTL L2
ENSG00000125703 ATG4C 45387 sc-eQTL 5.33e-01 0.057 0.0912 0.602 CD4_CTL L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 1.13e-01 0.154 0.097 0.602 CD4_CTL L2
ENSG00000162607 USP1 393222 sc-eQTL 9.64e-01 0.00425 0.0929 0.602 CD4_CTL L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.73e-01 -0.126 0.0923 0.602 CD4_CTL L2
ENSG00000079739 PGM1 -763892 sc-eQTL 8.99e-01 0.0097 0.0761 0.607 CD4_Naive L2
ENSG00000088035 ALG6 -538056 sc-eQTL 5.20e-01 0.0533 0.0826 0.607 CD4_Naive L2
ENSG00000116641 DOCK7 141133 sc-eQTL 5.99e-01 -0.0428 0.0812 0.607 CD4_Naive L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.57e-01 -0.032 0.0718 0.607 CD4_Naive L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 7.33e-01 -0.03 0.0878 0.607 CD4_Naive L2
ENSG00000162607 USP1 393222 sc-eQTL 4.06e-01 0.0557 0.067 0.607 CD4_Naive L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.43e-02 0.212 0.086 0.607 CD4_Naive L2
ENSG00000079739 PGM1 -763892 sc-eQTL 9.80e-01 0.00196 0.0797 0.607 CD4_TCM L2
ENSG00000088035 ALG6 -538056 sc-eQTL 7.27e-02 -0.166 0.0918 0.607 CD4_TCM L2
ENSG00000116641 DOCK7 141133 sc-eQTL 9.05e-01 -0.00976 0.082 0.607 CD4_TCM L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.95e-01 0.0313 0.0798 0.607 CD4_TCM L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 1.64e-01 0.131 0.0937 0.607 CD4_TCM L2
ENSG00000162607 USP1 393222 sc-eQTL 8.82e-01 -0.0115 0.0772 0.607 CD4_TCM L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 3.35e-01 0.0877 0.0909 0.607 CD4_TCM L2
ENSG00000079739 PGM1 -763892 sc-eQTL 8.12e-01 -0.0223 0.094 0.607 CD4_TEM L2
ENSG00000088035 ALG6 -538056 sc-eQTL 3.31e-01 -0.0918 0.0943 0.607 CD4_TEM L2
ENSG00000116641 DOCK7 141133 sc-eQTL 9.57e-01 -0.00492 0.0921 0.607 CD4_TEM L2
ENSG00000125703 ATG4C 45387 sc-eQTL 9.07e-01 0.0105 0.0895 0.607 CD4_TEM L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 7.81e-01 0.0257 0.0924 0.607 CD4_TEM L2
ENSG00000162607 USP1 393222 sc-eQTL 5.17e-01 0.0567 0.0874 0.607 CD4_TEM L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.92e-01 -0.125 0.0953 0.607 CD4_TEM L2
ENSG00000079739 PGM1 -763892 sc-eQTL 1.71e-01 0.118 0.0861 0.607 CD8_CTL L2
ENSG00000088035 ALG6 -538056 sc-eQTL 2.91e-01 -0.097 0.0917 0.607 CD8_CTL L2
ENSG00000116641 DOCK7 141133 sc-eQTL 2.46e-01 0.101 0.087 0.607 CD8_CTL L2
ENSG00000125703 ATG4C 45387 sc-eQTL 2.13e-02 0.213 0.0917 0.607 CD8_CTL L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 6.71e-01 -0.0411 0.0965 0.607 CD8_CTL L2
ENSG00000162607 USP1 393222 sc-eQTL 6.24e-01 0.0424 0.0865 0.607 CD8_CTL L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 2.79e-01 0.107 0.0987 0.607 CD8_CTL L2
ENSG00000079739 PGM1 -763892 sc-eQTL 6.34e-01 0.0417 0.0875 0.607 CD8_Naive L2
ENSG00000088035 ALG6 -538056 sc-eQTL 3.49e-01 -0.0848 0.0904 0.607 CD8_Naive L2
ENSG00000116641 DOCK7 141133 sc-eQTL 7.56e-02 -0.166 0.093 0.607 CD8_Naive L2
ENSG00000125703 ATG4C 45387 sc-eQTL 8.63e-02 0.154 0.0893 0.607 CD8_Naive L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 9.20e-01 0.00918 0.0911 0.607 CD8_Naive L2
ENSG00000162607 USP1 393222 sc-eQTL 8.64e-01 -0.0132 0.077 0.607 CD8_Naive L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 4.29e-01 0.0679 0.0857 0.607 CD8_Naive L2
ENSG00000079739 PGM1 -763892 sc-eQTL 4.64e-03 -0.272 0.095 0.604 CD8_TCM L2
ENSG00000088035 ALG6 -538056 sc-eQTL 1.11e-01 0.156 0.0975 0.604 CD8_TCM L2
ENSG00000116641 DOCK7 141133 sc-eQTL 7.26e-01 0.0336 0.0958 0.604 CD8_TCM L2
ENSG00000125703 ATG4C 45387 sc-eQTL 8.53e-01 -0.0182 0.098 0.604 CD8_TCM L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 5.11e-01 0.0627 0.0951 0.604 CD8_TCM L2
ENSG00000162607 USP1 393222 sc-eQTL 9.04e-01 -0.0111 0.0916 0.604 CD8_TCM L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.30e-02 0.24 0.0955 0.604 CD8_TCM L2
ENSG00000079739 PGM1 -763892 sc-eQTL 4.90e-01 0.0693 0.1 0.616 CD8_TEM L2
ENSG00000088035 ALG6 -538056 sc-eQTL 2.40e-02 0.226 0.0993 0.616 CD8_TEM L2
ENSG00000116641 DOCK7 141133 sc-eQTL 9.04e-01 0.0118 0.0975 0.616 CD8_TEM L2
ENSG00000125703 ATG4C 45387 sc-eQTL 3.56e-02 0.196 0.0927 0.616 CD8_TEM L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 6.91e-01 0.0403 0.101 0.616 CD8_TEM L2
ENSG00000162607 USP1 393222 sc-eQTL 3.05e-01 -0.0992 0.0966 0.616 CD8_TEM L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 8.92e-01 -0.0134 0.0984 0.616 CD8_TEM L2
ENSG00000079739 PGM1 -763892 sc-eQTL 1.19e-01 -0.143 0.091 0.606 MAIT L2
ENSG00000088035 ALG6 -538056 sc-eQTL 9.99e-01 -9.46e-05 0.0906 0.606 MAIT L2
ENSG00000116641 DOCK7 141133 sc-eQTL 6.94e-01 -0.0342 0.0868 0.606 MAIT L2
ENSG00000125703 ATG4C 45387 sc-eQTL 2.07e-02 0.211 0.0904 0.606 MAIT L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 5.30e-01 -0.0577 0.0916 0.606 MAIT L2
ENSG00000162607 USP1 393222 sc-eQTL 5.18e-01 0.0588 0.0909 0.606 MAIT L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 3.01e-01 0.0977 0.0942 0.606 MAIT L2
ENSG00000079739 PGM1 -763892 sc-eQTL 6.71e-01 -0.0394 0.0927 0.604 NK_CD56bright L2
ENSG00000088035 ALG6 -538056 sc-eQTL 8.25e-01 -0.021 0.0951 0.604 NK_CD56bright L2
ENSG00000116641 DOCK7 141133 sc-eQTL 1.31e-01 -0.124 0.0819 0.604 NK_CD56bright L2
ENSG00000125703 ATG4C 45387 sc-eQTL 3.09e-01 -0.0937 0.0918 0.604 NK_CD56bright L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 7.67e-01 0.0285 0.0958 0.604 NK_CD56bright L2
ENSG00000162607 USP1 393222 sc-eQTL 5.23e-01 0.0632 0.0987 0.604 NK_CD56bright L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.81e-01 -0.126 0.0941 0.604 NK_CD56bright L2
ENSG00000079739 PGM1 -763892 sc-eQTL 6.52e-01 -0.033 0.0731 0.606 NK_CD56dim L2
ENSG00000088035 ALG6 -538056 sc-eQTL 5.24e-01 -0.0592 0.0927 0.606 NK_CD56dim L2
ENSG00000116641 DOCK7 141133 sc-eQTL 2.09e-01 0.101 0.0805 0.606 NK_CD56dim L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.64e-01 -0.0356 0.082 0.606 NK_CD56dim L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 5.25e-01 -0.0593 0.0933 0.606 NK_CD56dim L2
ENSG00000162607 USP1 393222 sc-eQTL 8.78e-01 0.0139 0.0905 0.606 NK_CD56dim L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 7.35e-01 0.0342 0.101 0.606 NK_CD56dim L2
ENSG00000079739 PGM1 -763892 sc-eQTL 3.75e-01 0.0873 0.0983 0.61 NK_HLA L2
ENSG00000088035 ALG6 -538056 sc-eQTL 1.78e-01 -0.137 0.102 0.61 NK_HLA L2
ENSG00000116641 DOCK7 141133 sc-eQTL 6.73e-01 0.033 0.078 0.61 NK_HLA L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.58e-02 0.167 0.09 0.61 NK_HLA L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 9.46e-01 -0.00642 0.0953 0.61 NK_HLA L2
ENSG00000162607 USP1 393222 sc-eQTL 7.68e-01 0.0295 0.0997 0.61 NK_HLA L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 4.75e-01 0.0649 0.0907 0.61 NK_HLA L2
ENSG00000079739 PGM1 -763892 sc-eQTL 1.54e-01 0.113 0.0791 0.606 NK_cytokine L2
ENSG00000088035 ALG6 -538056 sc-eQTL 7.69e-02 0.158 0.0891 0.606 NK_cytokine L2
ENSG00000116641 DOCK7 141133 sc-eQTL 9.47e-02 0.139 0.0827 0.606 NK_cytokine L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.23e-01 0.0419 0.0851 0.606 NK_cytokine L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 7.06e-01 -0.0333 0.0881 0.606 NK_cytokine L2
ENSG00000162607 USP1 393222 sc-eQTL 9.85e-01 -0.00176 0.0927 0.606 NK_cytokine L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 5.40e-01 0.0577 0.0938 0.606 NK_cytokine L2
ENSG00000079739 PGM1 -763892 sc-eQTL 9.40e-01 0.0082 0.109 0.607 PB L2
ENSG00000088035 ALG6 -538056 sc-eQTL 8.60e-01 0.0201 0.114 0.607 PB L2
ENSG00000116641 DOCK7 141133 sc-eQTL 8.78e-01 -0.0188 0.122 0.607 PB L2
ENSG00000125703 ATG4C 45387 sc-eQTL 4.43e-01 0.0817 0.106 0.607 PB L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.26e-01 -0.0234 0.106 0.607 PB L2
ENSG00000162607 USP1 393222 sc-eQTL 8.20e-01 0.0242 0.106 0.607 PB L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 7.72e-01 0.0338 0.116 0.607 PB L2
ENSG00000079739 PGM1 -763892 sc-eQTL 7.78e-01 0.0243 0.0863 0.607 Pro_T L2
ENSG00000088035 ALG6 -538056 sc-eQTL 9.03e-01 -0.0107 0.0878 0.607 Pro_T L2
ENSG00000116641 DOCK7 141133 sc-eQTL 2.63e-01 0.0986 0.0878 0.607 Pro_T L2
ENSG00000125703 ATG4C 45387 sc-eQTL 9.26e-01 0.00714 0.0771 0.607 Pro_T L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 3.86e-02 -0.159 0.0765 0.607 Pro_T L2
ENSG00000162607 USP1 393222 sc-eQTL 6.56e-01 0.0237 0.0532 0.607 Pro_T L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 1.05e-01 0.146 0.0893 0.607 Pro_T L2
ENSG00000079739 PGM1 -763892 sc-eQTL 6.89e-01 0.0367 0.0917 0.607 Treg L2
ENSG00000088035 ALG6 -538056 sc-eQTL 7.39e-01 0.0327 0.098 0.607 Treg L2
ENSG00000116641 DOCK7 141133 sc-eQTL 7.12e-01 0.0333 0.09 0.607 Treg L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.52e-01 0.0415 0.092 0.607 Treg L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 3.46e-01 0.0907 0.096 0.607 Treg L2
ENSG00000162607 USP1 393222 sc-eQTL 6.77e-01 -0.0388 0.0931 0.607 Treg L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 8.40e-01 -0.0186 0.0921 0.607 Treg L2
ENSG00000079739 PGM1 -763892 sc-eQTL 3.98e-01 -0.0767 0.0904 0.602 cDC L2
ENSG00000088035 ALG6 -538056 sc-eQTL 7.55e-02 -0.163 0.0911 0.602 cDC L2
ENSG00000116641 DOCK7 141133 sc-eQTL 4.78e-01 0.0641 0.0901 0.602 cDC L2
ENSG00000125703 ATG4C 45387 sc-eQTL 5.29e-01 -0.0493 0.0782 0.602 cDC L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 5.38e-01 0.0612 0.0992 0.602 cDC L2
ENSG00000162607 USP1 393222 sc-eQTL 6.46e-01 0.0406 0.0883 0.602 cDC L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 8.12e-01 0.019 0.0797 0.602 cDC L2
ENSG00000079739 PGM1 -763892 sc-eQTL 2.56e-01 0.0963 0.0846 0.607 cMono_IL1B L2
ENSG00000088035 ALG6 -538056 sc-eQTL 4.61e-02 -0.169 0.0842 0.607 cMono_IL1B L2
ENSG00000116641 DOCK7 141133 sc-eQTL 7.46e-01 0.029 0.0896 0.607 cMono_IL1B L2
ENSG00000125703 ATG4C 45387 sc-eQTL 3.87e-01 0.0546 0.0629 0.607 cMono_IL1B L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 4.71e-01 0.0644 0.0892 0.607 cMono_IL1B L2
ENSG00000162607 USP1 393222 sc-eQTL 5.16e-01 -0.0512 0.0787 0.607 cMono_IL1B L2
ENSG00000240563 L1TD1 634670 sc-eQTL 7.11e-01 -0.0293 0.0791 0.607 cMono_IL1B L2
ENSG00000079739 PGM1 -763892 sc-eQTL 5.40e-01 0.0577 0.0939 0.607 cMono_S100A L2
ENSG00000088035 ALG6 -538056 sc-eQTL 2.19e-01 -0.117 0.0949 0.607 cMono_S100A L2
ENSG00000116641 DOCK7 141133 sc-eQTL 9.95e-01 0.000594 0.0883 0.607 cMono_S100A L2
ENSG00000125703 ATG4C 45387 sc-eQTL 7.78e-01 0.0215 0.0764 0.607 cMono_S100A L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 4.18e-01 0.0698 0.0861 0.607 cMono_S100A L2
ENSG00000162607 USP1 393222 sc-eQTL 5.54e-01 -0.0525 0.0887 0.607 cMono_S100A L2
ENSG00000240563 L1TD1 634670 sc-eQTL 2.80e-01 0.0797 0.0736 0.607 cMono_S100A L2
ENSG00000079739 PGM1 -763892 sc-eQTL 3.29e-01 -0.105 0.107 0.612 gdT L2
ENSG00000088035 ALG6 -538056 sc-eQTL 3.60e-01 -0.105 0.115 0.612 gdT L2
ENSG00000116641 DOCK7 141133 sc-eQTL 4.06e-01 0.0937 0.112 0.612 gdT L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.02e-01 -0.0562 0.108 0.612 gdT L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 3.51e-01 -0.107 0.114 0.612 gdT L2
ENSG00000162607 USP1 393222 sc-eQTL 1.80e-01 -0.145 0.108 0.612 gdT L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 7.62e-01 0.0341 0.112 0.612 gdT L2
ENSG00000079739 PGM1 -763892 sc-eQTL 5.88e-01 0.0507 0.0934 0.609 intMono L2
ENSG00000088035 ALG6 -538056 sc-eQTL 3.98e-01 0.0737 0.0869 0.609 intMono L2
ENSG00000116641 DOCK7 141133 sc-eQTL 5.87e-01 0.0484 0.0889 0.609 intMono L2
ENSG00000125703 ATG4C 45387 sc-eQTL 6.93e-01 -0.0335 0.0849 0.609 intMono L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 4.81e-01 0.0659 0.0934 0.609 intMono L2
ENSG00000162607 USP1 393222 sc-eQTL 5.91e-01 -0.0511 0.095 0.609 intMono L2
ENSG00000240563 L1TD1 634670 sc-eQTL 3.51e-01 -0.0653 0.0698 0.609 intMono L2
ENSG00000079739 PGM1 -763892 sc-eQTL 4.92e-01 -0.0601 0.0873 0.613 ncMono L2
ENSG00000088035 ALG6 -538056 sc-eQTL 3.36e-01 0.0924 0.0959 0.613 ncMono L2
ENSG00000116641 DOCK7 141133 sc-eQTL 8.33e-01 -0.0199 0.0945 0.613 ncMono L2
ENSG00000125703 ATG4C 45387 sc-eQTL 3.39e-01 0.0844 0.0881 0.613 ncMono L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 6.56e-01 0.0412 0.0923 0.613 ncMono L2
ENSG00000162607 USP1 393222 sc-eQTL 9.45e-01 -0.00657 0.0944 0.613 ncMono L2
ENSG00000240563 L1TD1 634670 sc-eQTL 3.13e-01 -0.0675 0.0668 0.613 ncMono L2
ENSG00000079739 PGM1 -763892 sc-eQTL 9.67e-01 -0.00435 0.105 0.61 pDC L2
ENSG00000088035 ALG6 -538056 sc-eQTL 5.51e-02 0.196 0.102 0.61 pDC L2
ENSG00000116641 DOCK7 141133 sc-eQTL 7.58e-01 -0.0324 0.105 0.61 pDC L2
ENSG00000125703 ATG4C 45387 sc-eQTL 2.55e-01 0.107 0.0938 0.61 pDC L2
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.63e-02 -0.181 0.105 0.61 pDC L2
ENSG00000162607 USP1 393222 sc-eQTL 3.33e-01 0.104 0.107 0.61 pDC L2
ENSG00000203965 EFCAB7 -693853 sc-eQTL 6.88e-01 -0.0376 0.0935 0.61 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -763892 sc-eQTL 5.69e-01 -0.0513 0.0899 0.607 B_Memory LOneK1K
ENSG00000088035 ALG6 -538056 sc-eQTL 3.94e-01 -0.0849 0.0993 0.607 B_Memory LOneK1K
ENSG00000116641 DOCK7 141133 sc-eQTL 2.41e-01 0.101 0.0861 0.607 B_Memory LOneK1K
ENSG00000125703 ATG4C 45387 sc-eQTL 3.61e-01 -0.0638 0.0697 0.607 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -764202 sc-eQTL 4.67e-01 -0.0667 0.0916 0.607 B_Memory LOneK1K
ENSG00000162607 USP1 393222 sc-eQTL 2.54e-01 0.102 0.0888 0.607 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -693853 sc-eQTL 2.03e-01 -0.122 0.0952 0.607 B_Memory LOneK1K
ENSG00000079739 PGM1 -763892 sc-eQTL 1.81e-01 0.123 0.092 0.607 B_Naive LOneK1K
ENSG00000088035 ALG6 -538056 sc-eQTL 3.13e-01 0.0959 0.0949 0.607 B_Naive LOneK1K
ENSG00000116641 DOCK7 141133 sc-eQTL 5.91e-01 -0.0477 0.0887 0.607 B_Naive LOneK1K
ENSG00000125703 ATG4C 45387 sc-eQTL 6.31e-03 0.184 0.0666 0.607 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -764202 sc-eQTL 3.27e-01 -0.094 0.0956 0.607 B_Naive LOneK1K
ENSG00000162607 USP1 393222 sc-eQTL 2.03e-01 -0.105 0.082 0.607 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -693853 sc-eQTL 2.67e-01 -0.107 0.096 0.607 B_Naive LOneK1K
ENSG00000079739 PGM1 -763892 sc-eQTL 4.28e-01 0.0686 0.0863 0.607 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -538056 sc-eQTL 3.36e-02 -0.177 0.0828 0.607 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 141133 sc-eQTL 7.62e-01 0.0255 0.0843 0.607 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 45387 sc-eQTL 3.02e-01 0.0602 0.0581 0.607 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -764202 sc-eQTL 3.42e-01 0.082 0.086 0.607 CD14_Mono LOneK1K
ENSG00000162607 USP1 393222 sc-eQTL 2.76e-01 -0.0802 0.0734 0.607 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 634670 sc-eQTL 7.12e-01 0.0295 0.0798 0.607 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -763892 sc-eQTL 7.45e-01 0.027 0.0828 0.608 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -538056 sc-eQTL 1.64e-01 0.131 0.0936 0.608 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 141133 sc-eQTL 9.37e-01 0.00733 0.0931 0.608 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 45387 sc-eQTL 7.89e-01 0.0212 0.0793 0.608 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -764202 sc-eQTL 4.41e-01 0.0711 0.092 0.608 CD16_Mono LOneK1K
ENSG00000162607 USP1 393222 sc-eQTL 3.20e-01 -0.0861 0.0864 0.608 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 634670 sc-eQTL 9.40e-02 -0.0987 0.0587 0.608 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -763892 sc-eQTL 3.27e-01 0.0704 0.0716 0.606 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -538056 sc-eQTL 9.99e-01 -8.33e-05 0.0861 0.606 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 141133 sc-eQTL 3.38e-02 0.163 0.0763 0.606 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 45387 sc-eQTL 9.84e-01 0.00154 0.077 0.606 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -764202 sc-eQTL 8.20e-01 -0.0207 0.0913 0.606 NK_CD56dim LOneK1K
ENSG00000162607 USP1 393222 sc-eQTL 7.08e-01 -0.031 0.0828 0.606 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -693853 sc-eQTL 6.58e-01 0.0447 0.101 0.606 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 141151 eQTL 1.48e-06 0.108 0.0223 0.0 0.0 0.36
ENSG00000125703 ATG4C 45387 eQTL 2.44e-05 0.072 0.017 0.0035 0.00385 0.36
ENSG00000132855 ANGPTL3 232032 pQTL 0.0253 0.0665 0.0297 0.0 0.0 0.367
ENSG00000142856 ITGB3BP -764202 eQTL 0.0024 -0.0905 0.0297 0.0 0.0 0.36
ENSG00000162607 USP1 393222 eQTL 0.00158 0.0414 0.0131 0.0 0.0 0.36

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 141151 4.86e-06 5.24e-06 8.81e-07 3.52e-06 1.66e-06 1.53e-06 5.92e-06 1.28e-06 4.48e-06 3.09e-06 6.53e-06 2.94e-06 7.69e-06 1.76e-06 9.73e-07 3.88e-06 2.24e-06 3.93e-06 1.75e-06 1.68e-06 2.77e-06 5.5e-06 4.67e-06 1.97e-06 7.95e-06 2.32e-06 3.05e-06 1.8e-06 5.11e-06 4.25e-06 2.57e-06 5.57e-07 7.77e-07 2.6e-06 1.9e-06 1.49e-06 1.3e-06 8.34e-07 1.41e-06 8.28e-07 1.03e-06 5.62e-06 7.18e-07 1.33e-07 6.9e-07 9.54e-07 9.03e-07 6.45e-07 5.08e-07
ENSG00000125703 ATG4C 45387 1.36e-05 1.48e-05 3.18e-06 9.47e-06 3.29e-06 7.4e-06 2.04e-05 3.5e-06 1.65e-05 8.14e-06 1.94e-05 8.01e-06 2.69e-05 6.03e-06 5.08e-06 9.88e-06 8.44e-06 1.4e-05 5.69e-06 4.62e-06 8.4e-06 1.54e-05 1.54e-05 5.66e-06 2.58e-05 5.57e-06 8e-06 7.23e-06 1.75e-05 1.5e-05 1.07e-05 1.58e-06 1.92e-06 6.04e-06 7.35e-06 4.43e-06 2.68e-06 2.74e-06 3.6e-06 2.77e-06 1.74e-06 1.76e-05 2.68e-06 4.39e-07 2.1e-06 2.68e-06 3.37e-06 1.44e-06 1.41e-06
ENSG00000142856 ITGB3BP -764202 3.21e-07 1.59e-07 6.99e-08 2.26e-07 1.1e-07 1.03e-07 2.5e-07 7.52e-08 1.94e-07 1.11e-07 1.83e-07 1.48e-07 2.38e-07 8.44e-08 6.27e-08 9.35e-08 6.63e-08 2.15e-07 7.53e-08 6.29e-08 1.34e-07 1.89e-07 1.73e-07 4.37e-08 2.28e-07 1.86e-07 1.33e-07 1.26e-07 1.34e-07 1.33e-07 1.22e-07 4.51e-08 3.8e-08 9.9e-08 6.35e-08 4.68e-08 5.62e-08 5.53e-08 5.69e-08 6.55e-08 4.58e-08 1.59e-07 3.31e-08 1.43e-08 3.71e-08 9.44e-09 9.1e-08 0.0 4.47e-08
ENSG00000162607 USP1 393222 1.26e-06 9.35e-07 3.18e-07 5.65e-07 2.71e-07 4.53e-07 1.08e-06 3.69e-07 1.2e-06 4.11e-07 1.35e-06 5.64e-07 1.55e-06 2.72e-07 4.19e-07 7.78e-07 8.01e-07 5.57e-07 6.91e-07 6.61e-07 5.66e-07 1.17e-06 7.78e-07 5.82e-07 1.85e-06 4.31e-07 7.61e-07 5.67e-07 1.04e-06 1e-06 5.39e-07 1.9e-07 2.31e-07 6.83e-07 4.49e-07 4.75e-07 5.58e-07 2.39e-07 3.5e-07 1.92e-07 2.57e-07 1.15e-06 1.09e-07 4.16e-08 1.54e-07 1.22e-07 2.28e-07 5.45e-08 1.68e-07