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Genes within 1Mb (chr1:62817334:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -776077 sc-eQTL 6.32e-01 0.0391 0.0816 0.524 B L1
ENSG00000088035 ALG6 -550241 sc-eQTL 1.13e-01 -0.134 0.0841 0.524 B L1
ENSG00000116641 DOCK7 128948 sc-eQTL 9.18e-01 0.00871 0.0846 0.524 B L1
ENSG00000125703 ATG4C 33202 sc-eQTL 3.44e-01 0.0557 0.0587 0.524 B L1
ENSG00000142856 ITGB3BP -776387 sc-eQTL 1.41e-01 -0.137 0.0931 0.524 B L1
ENSG00000162607 USP1 381037 sc-eQTL 9.85e-01 0.00155 0.0812 0.524 B L1
ENSG00000203965 EFCAB7 -706038 sc-eQTL 7.74e-01 -0.0276 0.0958 0.524 B L1
ENSG00000079739 PGM1 -776077 sc-eQTL 1.48e-01 0.101 0.0698 0.524 CD4T L1
ENSG00000088035 ALG6 -550241 sc-eQTL 4.36e-01 -0.0604 0.0773 0.524 CD4T L1
ENSG00000116641 DOCK7 128948 sc-eQTL 8.66e-01 -0.0133 0.0784 0.524 CD4T L1
ENSG00000125703 ATG4C 33202 sc-eQTL 9.95e-01 -0.000424 0.0633 0.524 CD4T L1
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.27e-01 0.0314 0.0898 0.524 CD4T L1
ENSG00000162607 USP1 381037 sc-eQTL 2.85e-01 -0.0656 0.0612 0.524 CD4T L1
ENSG00000203965 EFCAB7 -706038 sc-eQTL 3.41e-01 0.0769 0.0805 0.524 CD4T L1
ENSG00000079739 PGM1 -776077 sc-eQTL 3.33e-01 -0.0753 0.0775 0.524 CD8T L1
ENSG00000088035 ALG6 -550241 sc-eQTL 5.58e-01 -0.0502 0.0856 0.524 CD8T L1
ENSG00000116641 DOCK7 128948 sc-eQTL 8.78e-01 -0.0134 0.0868 0.524 CD8T L1
ENSG00000125703 ATG4C 33202 sc-eQTL 3.82e-02 0.17 0.0816 0.524 CD8T L1
ENSG00000142856 ITGB3BP -776387 sc-eQTL 9.41e-01 -0.00687 0.0922 0.524 CD8T L1
ENSG00000162607 USP1 381037 sc-eQTL 8.17e-01 -0.0166 0.0718 0.524 CD8T L1
ENSG00000203965 EFCAB7 -706038 sc-eQTL 6.05e-01 0.0475 0.0918 0.524 CD8T L1
ENSG00000079739 PGM1 -776077 sc-eQTL 8.01e-01 0.022 0.0869 0.52 DC L1
ENSG00000088035 ALG6 -550241 sc-eQTL 7.32e-01 -0.0307 0.0897 0.52 DC L1
ENSG00000116641 DOCK7 128948 sc-eQTL 8.67e-01 0.0154 0.092 0.52 DC L1
ENSG00000125703 ATG4C 33202 sc-eQTL 5.60e-01 -0.042 0.0719 0.52 DC L1
ENSG00000142856 ITGB3BP -776387 sc-eQTL 5.68e-01 -0.0575 0.101 0.52 DC L1
ENSG00000162607 USP1 381037 sc-eQTL 8.27e-01 -0.0192 0.0878 0.52 DC L1
ENSG00000203965 EFCAB7 -706038 sc-eQTL 1.02e-01 -0.143 0.087 0.52 DC L1
ENSG00000079739 PGM1 -776077 sc-eQTL 8.57e-01 0.0152 0.0844 0.524 Mono L1
ENSG00000088035 ALG6 -550241 sc-eQTL 3.87e-01 -0.0763 0.0879 0.524 Mono L1
ENSG00000116641 DOCK7 128948 sc-eQTL 6.44e-01 0.0394 0.0851 0.524 Mono L1
ENSG00000125703 ATG4C 33202 sc-eQTL 3.36e-01 0.0554 0.0574 0.524 Mono L1
ENSG00000142856 ITGB3BP -776387 sc-eQTL 8.46e-01 0.0176 0.091 0.524 Mono L1
ENSG00000162607 USP1 381037 sc-eQTL 8.70e-01 0.0122 0.0747 0.524 Mono L1
ENSG00000240563 L1TD1 622485 sc-eQTL 7.39e-01 -0.0233 0.0697 0.524 Mono L1
ENSG00000079739 PGM1 -776077 sc-eQTL 2.66e-01 0.0809 0.0726 0.524 NK L1
ENSG00000088035 ALG6 -550241 sc-eQTL 8.06e-01 -0.021 0.0853 0.524 NK L1
ENSG00000116641 DOCK7 128948 sc-eQTL 4.67e-02 0.139 0.0696 0.524 NK L1
ENSG00000125703 ATG4C 33202 sc-eQTL 9.60e-01 0.00382 0.0755 0.524 NK L1
ENSG00000142856 ITGB3BP -776387 sc-eQTL 1.77e-01 0.127 0.0934 0.524 NK L1
ENSG00000162607 USP1 381037 sc-eQTL 1.74e-01 -0.114 0.0835 0.524 NK L1
ENSG00000203965 EFCAB7 -706038 sc-eQTL 4.30e-01 -0.0804 0.102 0.524 NK L1
ENSG00000079739 PGM1 -776077 sc-eQTL 1.38e-01 -0.121 0.081 0.524 Other_T L1
ENSG00000088035 ALG6 -550241 sc-eQTL 4.11e-01 0.0673 0.0817 0.524 Other_T L1
ENSG00000116641 DOCK7 128948 sc-eQTL 3.25e-01 0.0822 0.0833 0.524 Other_T L1
ENSG00000125703 ATG4C 33202 sc-eQTL 3.64e-02 0.151 0.0715 0.524 Other_T L1
ENSG00000142856 ITGB3BP -776387 sc-eQTL 2.42e-01 -0.0749 0.0639 0.524 Other_T L1
ENSG00000162607 USP1 381037 sc-eQTL 3.55e-01 -0.0514 0.0554 0.524 Other_T L1
ENSG00000203965 EFCAB7 -706038 sc-eQTL 2.04e-01 0.126 0.0985 0.524 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -776077 sc-eQTL 8.07e-01 0.0285 0.117 0.528 B_Activated L2
ENSG00000088035 ALG6 -550241 sc-eQTL 8.77e-01 -0.0173 0.112 0.528 B_Activated L2
ENSG00000116641 DOCK7 128948 sc-eQTL 5.70e-01 -0.0591 0.104 0.528 B_Activated L2
ENSG00000125703 ATG4C 33202 sc-eQTL 9.81e-01 0.00266 0.109 0.528 B_Activated L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 1.72e-01 -0.146 0.106 0.528 B_Activated L2
ENSG00000162607 USP1 381037 sc-eQTL 7.41e-01 -0.0384 0.116 0.528 B_Activated L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 3.75e-01 0.0897 0.101 0.528 B_Activated L2
ENSG00000079739 PGM1 -776077 sc-eQTL 6.13e-01 -0.0502 0.0992 0.524 B_Intermediate L2
ENSG00000088035 ALG6 -550241 sc-eQTL 3.46e-01 -0.095 0.101 0.524 B_Intermediate L2
ENSG00000116641 DOCK7 128948 sc-eQTL 8.86e-01 -0.0138 0.0963 0.524 B_Intermediate L2
ENSG00000125703 ATG4C 33202 sc-eQTL 6.07e-01 -0.0419 0.0814 0.524 B_Intermediate L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.03e-01 -0.037 0.0971 0.524 B_Intermediate L2
ENSG00000162607 USP1 381037 sc-eQTL 6.27e-01 0.0472 0.0969 0.524 B_Intermediate L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 4.10e-01 -0.0793 0.096 0.524 B_Intermediate L2
ENSG00000079739 PGM1 -776077 sc-eQTL 7.09e-01 0.0364 0.0975 0.524 B_Memory L2
ENSG00000088035 ALG6 -550241 sc-eQTL 5.18e-01 -0.0642 0.0991 0.524 B_Memory L2
ENSG00000116641 DOCK7 128948 sc-eQTL 1.42e-01 0.136 0.0926 0.524 B_Memory L2
ENSG00000125703 ATG4C 33202 sc-eQTL 8.53e-01 -0.0164 0.0884 0.524 B_Memory L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 8.52e-01 -0.0189 0.101 0.524 B_Memory L2
ENSG00000162607 USP1 381037 sc-eQTL 7.69e-01 0.03 0.102 0.524 B_Memory L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 1.36e-01 0.149 0.0999 0.524 B_Memory L2
ENSG00000079739 PGM1 -776077 sc-eQTL 8.53e-01 0.0182 0.0981 0.524 B_Naive1 L2
ENSG00000088035 ALG6 -550241 sc-eQTL 3.35e-01 -0.0951 0.0983 0.524 B_Naive1 L2
ENSG00000116641 DOCK7 128948 sc-eQTL 6.98e-01 -0.0367 0.0944 0.524 B_Naive1 L2
ENSG00000125703 ATG4C 33202 sc-eQTL 4.59e-02 0.145 0.072 0.524 B_Naive1 L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 3.61e-01 -0.0882 0.0963 0.524 B_Naive1 L2
ENSG00000162607 USP1 381037 sc-eQTL 3.48e-01 -0.0796 0.0846 0.524 B_Naive1 L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 4.07e-01 -0.0853 0.103 0.524 B_Naive1 L2
ENSG00000079739 PGM1 -776077 sc-eQTL 1.85e-01 0.129 0.0972 0.524 B_Naive2 L2
ENSG00000088035 ALG6 -550241 sc-eQTL 2.92e-01 -0.107 0.101 0.524 B_Naive2 L2
ENSG00000116641 DOCK7 128948 sc-eQTL 9.09e-01 0.0111 0.0978 0.524 B_Naive2 L2
ENSG00000125703 ATG4C 33202 sc-eQTL 7.03e-01 -0.0359 0.0941 0.524 B_Naive2 L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 4.19e-01 -0.0826 0.102 0.524 B_Naive2 L2
ENSG00000162607 USP1 381037 sc-eQTL 7.01e-01 -0.0373 0.0972 0.524 B_Naive2 L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 9.50e-01 0.00636 0.102 0.524 B_Naive2 L2
ENSG00000079739 PGM1 -776077 sc-eQTL 3.97e-01 -0.0842 0.0991 0.511 CD4_CTL L2
ENSG00000088035 ALG6 -550241 sc-eQTL 9.32e-01 -0.009 0.105 0.511 CD4_CTL L2
ENSG00000116641 DOCK7 128948 sc-eQTL 6.18e-02 0.171 0.091 0.511 CD4_CTL L2
ENSG00000125703 ATG4C 33202 sc-eQTL 8.17e-01 0.022 0.0949 0.511 CD4_CTL L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 3.00e-01 0.105 0.101 0.511 CD4_CTL L2
ENSG00000162607 USP1 381037 sc-eQTL 3.59e-01 0.0888 0.0965 0.511 CD4_CTL L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 1.72e-01 -0.132 0.096 0.511 CD4_CTL L2
ENSG00000079739 PGM1 -776077 sc-eQTL 1.20e-01 0.122 0.0784 0.524 CD4_Naive L2
ENSG00000088035 ALG6 -550241 sc-eQTL 5.54e-01 0.0507 0.0855 0.524 CD4_Naive L2
ENSG00000116641 DOCK7 128948 sc-eQTL 3.26e-01 -0.0827 0.0839 0.524 CD4_Naive L2
ENSG00000125703 ATG4C 33202 sc-eQTL 8.07e-01 -0.0182 0.0744 0.524 CD4_Naive L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 6.98e-01 -0.0353 0.0908 0.524 CD4_Naive L2
ENSG00000162607 USP1 381037 sc-eQTL 7.56e-01 -0.0216 0.0694 0.524 CD4_Naive L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 5.91e-02 0.17 0.0895 0.524 CD4_Naive L2
ENSG00000079739 PGM1 -776077 sc-eQTL 2.12e-01 0.102 0.0814 0.524 CD4_TCM L2
ENSG00000088035 ALG6 -550241 sc-eQTL 1.28e-02 -0.235 0.0935 0.524 CD4_TCM L2
ENSG00000116641 DOCK7 128948 sc-eQTL 9.58e-01 -0.00443 0.0841 0.524 CD4_TCM L2
ENSG00000125703 ATG4C 33202 sc-eQTL 9.28e-01 -0.00738 0.0819 0.524 CD4_TCM L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 6.48e-01 0.0442 0.0965 0.524 CD4_TCM L2
ENSG00000162607 USP1 381037 sc-eQTL 1.26e-01 -0.121 0.0787 0.524 CD4_TCM L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 8.50e-01 -0.0177 0.0934 0.524 CD4_TCM L2
ENSG00000079739 PGM1 -776077 sc-eQTL 3.32e-01 -0.0945 0.0971 0.524 CD4_TEM L2
ENSG00000088035 ALG6 -550241 sc-eQTL 1.04e-01 -0.159 0.0972 0.524 CD4_TEM L2
ENSG00000116641 DOCK7 128948 sc-eQTL 8.99e-01 -0.0122 0.0954 0.524 CD4_TEM L2
ENSG00000125703 ATG4C 33202 sc-eQTL 3.86e-01 0.0803 0.0925 0.524 CD4_TEM L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 6.65e-01 0.0414 0.0956 0.524 CD4_TEM L2
ENSG00000162607 USP1 381037 sc-eQTL 7.14e-01 0.0333 0.0906 0.524 CD4_TEM L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 1.89e-01 -0.13 0.0987 0.524 CD4_TEM L2
ENSG00000079739 PGM1 -776077 sc-eQTL 5.77e-01 0.0492 0.0881 0.524 CD8_CTL L2
ENSG00000088035 ALG6 -550241 sc-eQTL 1.74e-01 -0.127 0.0934 0.524 CD8_CTL L2
ENSG00000116641 DOCK7 128948 sc-eQTL 9.12e-01 0.00983 0.089 0.524 CD8_CTL L2
ENSG00000125703 ATG4C 33202 sc-eQTL 4.95e-03 0.264 0.093 0.524 CD8_CTL L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 3.59e-01 -0.0904 0.0983 0.524 CD8_CTL L2
ENSG00000162607 USP1 381037 sc-eQTL 6.59e-01 0.039 0.0882 0.524 CD8_CTL L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 4.07e-01 0.0836 0.101 0.524 CD8_CTL L2
ENSG00000079739 PGM1 -776077 sc-eQTL 6.55e-01 -0.0402 0.09 0.524 CD8_Naive L2
ENSG00000088035 ALG6 -550241 sc-eQTL 4.54e-01 -0.0698 0.0931 0.524 CD8_Naive L2
ENSG00000116641 DOCK7 128948 sc-eQTL 8.33e-02 -0.166 0.0956 0.524 CD8_Naive L2
ENSG00000125703 ATG4C 33202 sc-eQTL 1.30e-01 0.14 0.092 0.524 CD8_Naive L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 3.86e-01 0.0812 0.0935 0.524 CD8_Naive L2
ENSG00000162607 USP1 381037 sc-eQTL 8.40e-01 -0.0161 0.0792 0.524 CD8_Naive L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 4.82e-01 0.0621 0.0882 0.524 CD8_Naive L2
ENSG00000079739 PGM1 -776077 sc-eQTL 6.11e-03 -0.268 0.0966 0.519 CD8_TCM L2
ENSG00000088035 ALG6 -550241 sc-eQTL 1.47e-01 0.144 0.0992 0.519 CD8_TCM L2
ENSG00000116641 DOCK7 128948 sc-eQTL 4.08e-01 0.0806 0.0972 0.519 CD8_TCM L2
ENSG00000125703 ATG4C 33202 sc-eQTL 6.83e-01 -0.0407 0.0996 0.519 CD8_TCM L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 3.03e-01 0.0996 0.0965 0.519 CD8_TCM L2
ENSG00000162607 USP1 381037 sc-eQTL 9.28e-01 0.00837 0.0931 0.519 CD8_TCM L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 9.18e-03 0.255 0.0969 0.519 CD8_TCM L2
ENSG00000079739 PGM1 -776077 sc-eQTL 6.46e-01 0.0482 0.105 0.525 CD8_TEM L2
ENSG00000088035 ALG6 -550241 sc-eQTL 1.83e-01 0.14 0.105 0.525 CD8_TEM L2
ENSG00000116641 DOCK7 128948 sc-eQTL 6.63e-01 0.0444 0.102 0.525 CD8_TEM L2
ENSG00000125703 ATG4C 33202 sc-eQTL 2.98e-01 0.102 0.0977 0.525 CD8_TEM L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.96e-01 0.0275 0.106 0.525 CD8_TEM L2
ENSG00000162607 USP1 381037 sc-eQTL 2.00e-01 -0.13 0.101 0.525 CD8_TEM L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 9.25e-01 0.00964 0.103 0.525 CD8_TEM L2
ENSG00000079739 PGM1 -776077 sc-eQTL 3.19e-02 -0.201 0.0929 0.519 MAIT L2
ENSG00000088035 ALG6 -550241 sc-eQTL 8.80e-01 0.014 0.093 0.519 MAIT L2
ENSG00000116641 DOCK7 128948 sc-eQTL 6.74e-01 0.0375 0.089 0.519 MAIT L2
ENSG00000125703 ATG4C 33202 sc-eQTL 7.63e-02 0.166 0.0932 0.519 MAIT L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 8.22e-01 -0.0212 0.0941 0.519 MAIT L2
ENSG00000162607 USP1 381037 sc-eQTL 7.52e-01 -0.0296 0.0933 0.519 MAIT L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 1.61e-01 0.136 0.0964 0.519 MAIT L2
ENSG00000079739 PGM1 -776077 sc-eQTL 8.04e-01 -0.0244 0.098 0.527 NK_CD56bright L2
ENSG00000088035 ALG6 -550241 sc-eQTL 8.48e-01 -0.0193 0.101 0.527 NK_CD56bright L2
ENSG00000116641 DOCK7 128948 sc-eQTL 4.19e-01 -0.0704 0.087 0.527 NK_CD56bright L2
ENSG00000125703 ATG4C 33202 sc-eQTL 2.43e-01 -0.114 0.097 0.527 NK_CD56bright L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 6.04e-01 -0.0526 0.101 0.527 NK_CD56bright L2
ENSG00000162607 USP1 381037 sc-eQTL 2.86e-01 0.111 0.104 0.527 NK_CD56bright L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 7.31e-02 -0.179 0.0991 0.527 NK_CD56bright L2
ENSG00000079739 PGM1 -776077 sc-eQTL 3.04e-01 -0.0779 0.0756 0.522 NK_CD56dim L2
ENSG00000088035 ALG6 -550241 sc-eQTL 3.50e-01 -0.0899 0.0959 0.522 NK_CD56dim L2
ENSG00000116641 DOCK7 128948 sc-eQTL 5.04e-02 0.163 0.0829 0.522 NK_CD56dim L2
ENSG00000125703 ATG4C 33202 sc-eQTL 4.57e-01 -0.0632 0.0849 0.522 NK_CD56dim L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 2.54e-01 0.11 0.0964 0.522 NK_CD56dim L2
ENSG00000162607 USP1 381037 sc-eQTL 5.03e-01 -0.0628 0.0937 0.522 NK_CD56dim L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 7.52e-01 0.0331 0.104 0.522 NK_CD56dim L2
ENSG00000079739 PGM1 -776077 sc-eQTL 2.78e-01 0.111 0.102 0.525 NK_HLA L2
ENSG00000088035 ALG6 -550241 sc-eQTL 8.29e-01 -0.0229 0.106 0.525 NK_HLA L2
ENSG00000116641 DOCK7 128948 sc-eQTL 5.87e-01 0.044 0.0809 0.525 NK_HLA L2
ENSG00000125703 ATG4C 33202 sc-eQTL 8.21e-02 0.163 0.0934 0.525 NK_HLA L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 6.02e-01 0.0516 0.0987 0.525 NK_HLA L2
ENSG00000162607 USP1 381037 sc-eQTL 7.95e-01 -0.0269 0.103 0.525 NK_HLA L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 6.77e-01 0.0393 0.0941 0.525 NK_HLA L2
ENSG00000079739 PGM1 -776077 sc-eQTL 8.95e-02 0.139 0.0816 0.522 NK_cytokine L2
ENSG00000088035 ALG6 -550241 sc-eQTL 1.47e-01 0.134 0.0924 0.522 NK_cytokine L2
ENSG00000116641 DOCK7 128948 sc-eQTL 2.84e-01 0.0923 0.0858 0.522 NK_cytokine L2
ENSG00000125703 ATG4C 33202 sc-eQTL 5.81e-01 0.0486 0.088 0.522 NK_cytokine L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.30e-01 0.0315 0.0911 0.522 NK_cytokine L2
ENSG00000162607 USP1 381037 sc-eQTL 1.33e-01 -0.144 0.0953 0.522 NK_cytokine L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 5.94e-01 0.0519 0.0971 0.522 NK_cytokine L2
ENSG00000079739 PGM1 -776077 sc-eQTL 9.07e-01 0.0132 0.113 0.533 PB L2
ENSG00000088035 ALG6 -550241 sc-eQTL 8.19e-01 0.0272 0.119 0.533 PB L2
ENSG00000116641 DOCK7 128948 sc-eQTL 4.72e-01 0.0913 0.126 0.533 PB L2
ENSG00000125703 ATG4C 33202 sc-eQTL 2.62e-01 0.124 0.11 0.533 PB L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 9.33e-01 -0.00928 0.11 0.533 PB L2
ENSG00000162607 USP1 381037 sc-eQTL 9.83e-01 -0.00238 0.11 0.533 PB L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 3.72e-01 0.108 0.121 0.533 PB L2
ENSG00000079739 PGM1 -776077 sc-eQTL 8.39e-01 -0.0181 0.0886 0.524 Pro_T L2
ENSG00000088035 ALG6 -550241 sc-eQTL 9.49e-01 -0.00574 0.0902 0.524 Pro_T L2
ENSG00000116641 DOCK7 128948 sc-eQTL 9.83e-01 0.00189 0.0905 0.524 Pro_T L2
ENSG00000125703 ATG4C 33202 sc-eQTL 6.74e-01 0.0334 0.0792 0.524 Pro_T L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 1.17e-01 -0.124 0.079 0.524 Pro_T L2
ENSG00000162607 USP1 381037 sc-eQTL 7.65e-01 -0.0164 0.0546 0.524 Pro_T L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 1.96e-01 0.119 0.0919 0.524 Pro_T L2
ENSG00000079739 PGM1 -776077 sc-eQTL 9.91e-01 0.00101 0.0935 0.524 Treg L2
ENSG00000088035 ALG6 -550241 sc-eQTL 5.94e-01 0.0533 0.0999 0.524 Treg L2
ENSG00000116641 DOCK7 128948 sc-eQTL 5.25e-01 0.0584 0.0917 0.524 Treg L2
ENSG00000125703 ATG4C 33202 sc-eQTL 9.16e-01 0.00986 0.0937 0.524 Treg L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 1.31e-01 0.148 0.0975 0.524 Treg L2
ENSG00000162607 USP1 381037 sc-eQTL 5.47e-01 -0.0572 0.0948 0.524 Treg L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 7.32e-01 0.0322 0.0938 0.524 Treg L2
ENSG00000079739 PGM1 -776077 sc-eQTL 9.42e-01 -0.00671 0.0926 0.52 cDC L2
ENSG00000088035 ALG6 -550241 sc-eQTL 8.45e-02 -0.162 0.0931 0.52 cDC L2
ENSG00000116641 DOCK7 128948 sc-eQTL 2.80e-01 0.0996 0.0918 0.52 cDC L2
ENSG00000125703 ATG4C 33202 sc-eQTL 9.63e-01 -0.00375 0.08 0.52 cDC L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.11e-01 0.0376 0.101 0.52 cDC L2
ENSG00000162607 USP1 381037 sc-eQTL 8.28e-01 -0.0197 0.0902 0.52 cDC L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 1.85e-01 -0.108 0.0811 0.52 cDC L2
ENSG00000079739 PGM1 -776077 sc-eQTL 6.47e-01 0.0403 0.0879 0.524 cMono_IL1B L2
ENSG00000088035 ALG6 -550241 sc-eQTL 2.94e-01 -0.0924 0.0878 0.524 cMono_IL1B L2
ENSG00000116641 DOCK7 128948 sc-eQTL 9.09e-01 0.0106 0.0928 0.524 cMono_IL1B L2
ENSG00000125703 ATG4C 33202 sc-eQTL 4.89e-01 0.0452 0.0652 0.524 cMono_IL1B L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.43e-01 -0.0303 0.0924 0.524 cMono_IL1B L2
ENSG00000162607 USP1 381037 sc-eQTL 8.15e-01 0.0191 0.0815 0.524 cMono_IL1B L2
ENSG00000240563 L1TD1 622485 sc-eQTL 6.95e-01 -0.0321 0.0819 0.524 cMono_IL1B L2
ENSG00000079739 PGM1 -776077 sc-eQTL 9.60e-01 0.00496 0.098 0.524 cMono_S100A L2
ENSG00000088035 ALG6 -550241 sc-eQTL 7.10e-01 -0.037 0.0993 0.524 cMono_S100A L2
ENSG00000116641 DOCK7 128948 sc-eQTL 3.21e-01 0.0914 0.0919 0.524 cMono_S100A L2
ENSG00000125703 ATG4C 33202 sc-eQTL 7.73e-01 0.023 0.0797 0.524 cMono_S100A L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 4.29e-01 0.0712 0.0898 0.524 cMono_S100A L2
ENSG00000162607 USP1 381037 sc-eQTL 7.25e-01 -0.0326 0.0925 0.524 cMono_S100A L2
ENSG00000240563 L1TD1 622485 sc-eQTL 3.09e-01 0.0783 0.0768 0.524 cMono_S100A L2
ENSG00000079739 PGM1 -776077 sc-eQTL 8.39e-01 0.0221 0.108 0.518 gdT L2
ENSG00000088035 ALG6 -550241 sc-eQTL 2.91e-01 -0.122 0.115 0.518 gdT L2
ENSG00000116641 DOCK7 128948 sc-eQTL 1.83e-01 0.151 0.113 0.518 gdT L2
ENSG00000125703 ATG4C 33202 sc-eQTL 2.24e-01 -0.132 0.108 0.518 gdT L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 4.00e-01 -0.0969 0.115 0.518 gdT L2
ENSG00000162607 USP1 381037 sc-eQTL 8.69e-01 -0.018 0.109 0.518 gdT L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 5.27e-01 -0.0717 0.113 0.518 gdT L2
ENSG00000079739 PGM1 -776077 sc-eQTL 6.18e-01 0.0485 0.0971 0.522 intMono L2
ENSG00000088035 ALG6 -550241 sc-eQTL 6.72e-01 -0.0383 0.0905 0.522 intMono L2
ENSG00000116641 DOCK7 128948 sc-eQTL 3.52e-01 0.0861 0.0922 0.522 intMono L2
ENSG00000125703 ATG4C 33202 sc-eQTL 9.33e-01 -0.0074 0.0883 0.522 intMono L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 9.34e-01 0.00812 0.0972 0.522 intMono L2
ENSG00000162607 USP1 381037 sc-eQTL 6.26e-01 -0.0482 0.0988 0.522 intMono L2
ENSG00000240563 L1TD1 622485 sc-eQTL 4.50e-01 -0.0549 0.0726 0.522 intMono L2
ENSG00000079739 PGM1 -776077 sc-eQTL 8.33e-01 -0.0189 0.0894 0.527 ncMono L2
ENSG00000088035 ALG6 -550241 sc-eQTL 8.15e-02 0.171 0.0975 0.527 ncMono L2
ENSG00000116641 DOCK7 128948 sc-eQTL 5.38e-01 -0.0595 0.0966 0.527 ncMono L2
ENSG00000125703 ATG4C 33202 sc-eQTL 5.42e-01 0.055 0.0902 0.527 ncMono L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 8.27e-01 0.0206 0.0944 0.527 ncMono L2
ENSG00000162607 USP1 381037 sc-eQTL 8.99e-01 0.0122 0.0965 0.527 ncMono L2
ENSG00000240563 L1TD1 622485 sc-eQTL 5.41e-01 -0.0419 0.0684 0.527 ncMono L2
ENSG00000079739 PGM1 -776077 sc-eQTL 7.88e-01 0.0276 0.103 0.52 pDC L2
ENSG00000088035 ALG6 -550241 sc-eQTL 4.94e-01 0.0684 0.0998 0.52 pDC L2
ENSG00000116641 DOCK7 128948 sc-eQTL 5.58e-01 -0.0599 0.102 0.52 pDC L2
ENSG00000125703 ATG4C 33202 sc-eQTL 9.78e-01 -0.00258 0.0916 0.52 pDC L2
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.25e-02 -0.184 0.102 0.52 pDC L2
ENSG00000162607 USP1 381037 sc-eQTL 6.52e-01 0.0473 0.105 0.52 pDC L2
ENSG00000203965 EFCAB7 -706038 sc-eQTL 6.51e-01 -0.0412 0.0909 0.52 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -776077 sc-eQTL 8.89e-01 -0.0129 0.0921 0.524 B_Memory LOneK1K
ENSG00000088035 ALG6 -550241 sc-eQTL 1.26e-01 -0.156 0.101 0.524 B_Memory LOneK1K
ENSG00000116641 DOCK7 128948 sc-eQTL 3.66e-01 0.0799 0.0883 0.524 B_Memory LOneK1K
ENSG00000125703 ATG4C 33202 sc-eQTL 3.96e-01 -0.0607 0.0714 0.524 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -776387 sc-eQTL 3.06e-01 -0.0961 0.0937 0.524 B_Memory LOneK1K
ENSG00000162607 USP1 381037 sc-eQTL 3.25e-01 0.0898 0.091 0.524 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -706038 sc-eQTL 7.27e-01 0.0343 0.0979 0.524 B_Memory LOneK1K
ENSG00000079739 PGM1 -776077 sc-eQTL 6.10e-01 0.0486 0.0951 0.524 B_Naive LOneK1K
ENSG00000088035 ALG6 -550241 sc-eQTL 2.59e-01 -0.11 0.0977 0.524 B_Naive LOneK1K
ENSG00000116641 DOCK7 128948 sc-eQTL 8.80e-01 -0.0139 0.0915 0.524 B_Naive LOneK1K
ENSG00000125703 ATG4C 33202 sc-eQTL 5.16e-02 0.135 0.0692 0.524 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -776387 sc-eQTL 2.33e-01 -0.118 0.0984 0.524 B_Naive LOneK1K
ENSG00000162607 USP1 381037 sc-eQTL 3.44e-01 -0.0803 0.0846 0.524 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -706038 sc-eQTL 5.86e-01 -0.0541 0.0992 0.524 B_Naive LOneK1K
ENSG00000079739 PGM1 -776077 sc-eQTL 8.43e-01 0.0178 0.0898 0.524 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -550241 sc-eQTL 2.46e-01 -0.101 0.0867 0.524 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 128948 sc-eQTL 6.90e-01 0.035 0.0875 0.524 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 33202 sc-eQTL 2.77e-01 0.0657 0.0604 0.524 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -776387 sc-eQTL 6.97e-01 0.0349 0.0895 0.524 CD14_Mono LOneK1K
ENSG00000162607 USP1 381037 sc-eQTL 8.34e-01 -0.016 0.0765 0.524 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 622485 sc-eQTL 8.09e-01 0.0201 0.0829 0.524 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -776077 sc-eQTL 7.07e-01 0.0321 0.0851 0.524 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -550241 sc-eQTL 3.21e-01 0.096 0.0964 0.524 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 128948 sc-eQTL 8.41e-01 0.0193 0.0956 0.524 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 33202 sc-eQTL 9.98e-01 0.000192 0.0815 0.524 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -776387 sc-eQTL 7.97e-01 0.0244 0.0947 0.524 CD16_Mono LOneK1K
ENSG00000162607 USP1 381037 sc-eQTL 7.41e-01 -0.0295 0.0889 0.524 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 622485 sc-eQTL 2.05e-01 -0.0768 0.0604 0.524 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -776077 sc-eQTL 3.57e-01 0.0679 0.0736 0.522 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -550241 sc-eQTL 9.06e-01 -0.0105 0.0885 0.522 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 128948 sc-eQTL 2.81e-02 0.173 0.0784 0.522 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 33202 sc-eQTL 9.33e-01 -0.00668 0.0792 0.522 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -776387 sc-eQTL 1.78e-01 0.126 0.0934 0.522 NK_CD56dim LOneK1K
ENSG00000162607 USP1 381037 sc-eQTL 5.75e-02 -0.161 0.0844 0.522 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -706038 sc-eQTL 9.10e-01 0.0118 0.104 0.522 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 128966 eQTL 1.39e-05 0.0927 0.0212 0.0 0.0 0.459
ENSG00000125703 ATG4C 33202 eQTL 0.00036 0.0579 0.0162 0.0 0.0 0.459
ENSG00000132855 ANGPTL3 219847 pQTL 0.019 0.0683 0.0291 0.0 0.0 0.461
ENSG00000142856 ITGB3BP -776387 eQTL 0.00198 -0.0876 0.0283 0.0 0.0 0.459
ENSG00000162607 USP1 381037 eQTL 0.00413 0.0357 0.0124 0.0 0.0 0.459

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 128966 4.65e-06 4.74e-06 8.72e-07 2.61e-06 1.32e-06 1.57e-06 3.65e-06 9.93e-07 4.53e-06 2.11e-06 4.52e-06 3.54e-06 7.5e-06 2.33e-06 1.43e-06 3.42e-06 2e-06 2.96e-06 1.45e-06 1.02e-06 2.93e-06 4.49e-06 3.6e-06 1.57e-06 5.26e-06 1.62e-06 2.47e-06 1.84e-06 4.32e-06 4.14e-06 2.51e-06 4.88e-07 5.51e-07 1.71e-06 2.04e-06 1.13e-06 9.64e-07 4.42e-07 9.86e-07 4.26e-07 3.06e-07 5.79e-06 3.83e-07 1.68e-07 3.58e-07 7.95e-07 8.71e-07 5.52e-07 3.73e-07
ENSG00000125703 ATG4C 33202 1.27e-05 1.51e-05 2.46e-06 8.45e-06 2.48e-06 6.2e-06 1.85e-05 2.44e-06 1.29e-05 6.52e-06 1.76e-05 6.84e-06 2.49e-05 5.63e-06 4.35e-06 9.06e-06 7.91e-06 1.17e-05 4.02e-06 3.64e-06 7e-06 1.28e-05 1.32e-05 4.37e-06 2.34e-05 4.75e-06 7.27e-06 6.14e-06 1.53e-05 1.38e-05 9.19e-06 1.06e-06 1.4e-06 3.99e-06 5.86e-06 3.74e-06 1.7e-06 2.38e-06 2.8e-06 1.76e-06 9.34e-07 1.85e-05 2.34e-06 2.1e-07 9.9e-07 2.34e-06 2.1e-06 8.83e-07 5.61e-07
ENSG00000142856 ITGB3BP -776387 2.91e-07 1.27e-07 5.72e-08 1.9e-07 1.03e-07 9.05e-08 1.6e-07 5.53e-08 1.45e-07 6.08e-08 1.52e-07 1.08e-07 1.53e-07 7.64e-08 5.98e-08 7.23e-08 4.01e-08 1.4e-07 7.12e-08 5.2e-08 1.25e-07 1.26e-07 1.44e-07 2.79e-08 1.55e-07 1.25e-07 1.13e-07 1.06e-07 1.23e-07 9.88e-08 1.06e-07 4.51e-08 3.68e-08 8.89e-08 4.84e-08 3.18e-08 5.58e-08 9.17e-08 6.71e-08 3.99e-08 5.54e-08 1.4e-07 4.83e-08 1.61e-08 3.29e-08 1.71e-08 1e-07 0.0 4.98e-08