logo

Genes within 1Mb (chr1:62790022:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -803389 sc-eQTL 6.28e-01 0.0388 0.08 0.598 B L1
ENSG00000088035 ALG6 -577553 sc-eQTL 5.70e-01 -0.0471 0.0829 0.598 B L1
ENSG00000116641 DOCK7 101636 sc-eQTL 8.52e-01 -0.0155 0.0829 0.598 B L1
ENSG00000125703 ATG4C 5890 sc-eQTL 4.11e-01 0.0475 0.0576 0.598 B L1
ENSG00000142856 ITGB3BP -803699 sc-eQTL 2.55e-01 -0.104 0.0915 0.598 B L1
ENSG00000162607 USP1 353725 sc-eQTL 8.15e-01 0.0187 0.0796 0.598 B L1
ENSG00000203965 EFCAB7 -733350 sc-eQTL 1.74e-01 -0.128 0.0936 0.598 B L1
ENSG00000079739 PGM1 -803389 sc-eQTL 6.34e-01 0.0327 0.0686 0.598 CD4T L1
ENSG00000088035 ALG6 -577553 sc-eQTL 6.25e-01 -0.037 0.0757 0.598 CD4T L1
ENSG00000116641 DOCK7 101636 sc-eQTL 5.42e-01 0.0468 0.0766 0.598 CD4T L1
ENSG00000125703 ATG4C 5890 sc-eQTL 6.48e-01 0.0283 0.0619 0.598 CD4T L1
ENSG00000142856 ITGB3BP -803699 sc-eQTL 5.50e-01 0.0525 0.0878 0.598 CD4T L1
ENSG00000162607 USP1 353725 sc-eQTL 7.12e-01 0.0222 0.06 0.598 CD4T L1
ENSG00000203965 EFCAB7 -733350 sc-eQTL 8.69e-02 0.135 0.0783 0.598 CD4T L1
ENSG00000079739 PGM1 -803389 sc-eQTL 8.76e-01 -0.0119 0.0759 0.598 CD8T L1
ENSG00000088035 ALG6 -577553 sc-eQTL 6.61e-01 -0.0367 0.0837 0.598 CD8T L1
ENSG00000116641 DOCK7 101636 sc-eQTL 7.94e-01 -0.0221 0.0848 0.598 CD8T L1
ENSG00000125703 ATG4C 5890 sc-eQTL 4.24e-02 0.163 0.0798 0.598 CD8T L1
ENSG00000142856 ITGB3BP -803699 sc-eQTL 6.60e-01 0.0397 0.0901 0.598 CD8T L1
ENSG00000162607 USP1 353725 sc-eQTL 6.55e-01 -0.0314 0.0702 0.598 CD8T L1
ENSG00000203965 EFCAB7 -733350 sc-eQTL 6.14e-01 0.0453 0.0898 0.598 CD8T L1
ENSG00000079739 PGM1 -803389 sc-eQTL 3.05e-01 -0.0872 0.0848 0.597 DC L1
ENSG00000088035 ALG6 -577553 sc-eQTL 8.07e-01 0.0215 0.0878 0.597 DC L1
ENSG00000116641 DOCK7 101636 sc-eQTL 9.47e-01 0.00601 0.09 0.597 DC L1
ENSG00000125703 ATG4C 5890 sc-eQTL 6.58e-01 -0.0312 0.0704 0.597 DC L1
ENSG00000142856 ITGB3BP -803699 sc-eQTL 9.10e-01 -0.0112 0.0984 0.597 DC L1
ENSG00000162607 USP1 353725 sc-eQTL 6.86e-01 0.0348 0.0859 0.597 DC L1
ENSG00000203965 EFCAB7 -733350 sc-eQTL 4.66e-01 -0.0625 0.0855 0.597 DC L1
ENSG00000079739 PGM1 -803389 sc-eQTL 3.59e-01 0.0757 0.0823 0.598 Mono L1
ENSG00000088035 ALG6 -577553 sc-eQTL 8.14e-02 -0.15 0.0854 0.598 Mono L1
ENSG00000116641 DOCK7 101636 sc-eQTL 1.92e-01 0.108 0.0829 0.598 Mono L1
ENSG00000125703 ATG4C 5890 sc-eQTL 1.85e-01 0.0745 0.056 0.598 Mono L1
ENSG00000142856 ITGB3BP -803699 sc-eQTL 3.84e-01 0.0773 0.0887 0.598 Mono L1
ENSG00000162607 USP1 353725 sc-eQTL 5.66e-01 -0.042 0.0729 0.598 Mono L1
ENSG00000240563 L1TD1 595173 sc-eQTL 4.09e-01 -0.0563 0.068 0.598 Mono L1
ENSG00000079739 PGM1 -803389 sc-eQTL 5.69e-01 0.0409 0.0716 0.599 NK L1
ENSG00000088035 ALG6 -577553 sc-eQTL 9.00e-01 -0.0105 0.084 0.599 NK L1
ENSG00000116641 DOCK7 101636 sc-eQTL 1.07e-01 0.111 0.0688 0.599 NK L1
ENSG00000125703 ATG4C 5890 sc-eQTL 9.25e-01 -0.00704 0.0743 0.599 NK L1
ENSG00000142856 ITGB3BP -803699 sc-eQTL 9.43e-01 0.00666 0.0924 0.599 NK L1
ENSG00000162607 USP1 353725 sc-eQTL 5.31e-01 -0.0518 0.0825 0.599 NK L1
ENSG00000203965 EFCAB7 -733350 sc-eQTL 9.53e-01 -0.00589 0.1 0.599 NK L1
ENSG00000079739 PGM1 -803389 sc-eQTL 3.04e-01 -0.0819 0.0794 0.598 Other_T L1
ENSG00000088035 ALG6 -577553 sc-eQTL 2.27e-01 0.0966 0.0797 0.598 Other_T L1
ENSG00000116641 DOCK7 101636 sc-eQTL 8.20e-01 0.0186 0.0816 0.598 Other_T L1
ENSG00000125703 ATG4C 5890 sc-eQTL 8.35e-03 0.185 0.0695 0.598 Other_T L1
ENSG00000142856 ITGB3BP -803699 sc-eQTL 2.65e-01 -0.0699 0.0625 0.598 Other_T L1
ENSG00000162607 USP1 353725 sc-eQTL 8.74e-01 -0.00865 0.0543 0.598 Other_T L1
ENSG00000203965 EFCAB7 -733350 sc-eQTL 4.35e-01 0.0756 0.0966 0.598 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -803389 sc-eQTL 7.59e-01 -0.034 0.111 0.597 B_Activated L2
ENSG00000088035 ALG6 -577553 sc-eQTL 4.77e-01 -0.0758 0.106 0.597 B_Activated L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.28e-01 -0.00891 0.0991 0.597 B_Activated L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.68e-01 -0.0595 0.104 0.597 B_Activated L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 6.06e-02 -0.19 0.101 0.597 B_Activated L2
ENSG00000162607 USP1 353725 sc-eQTL 9.61e-01 -0.00546 0.11 0.597 B_Activated L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 6.86e-01 0.039 0.0963 0.597 B_Activated L2
ENSG00000079739 PGM1 -803389 sc-eQTL 4.65e-01 -0.0715 0.0978 0.599 B_Intermediate L2
ENSG00000088035 ALG6 -577553 sc-eQTL 5.63e-01 -0.0577 0.0994 0.599 B_Intermediate L2
ENSG00000116641 DOCK7 101636 sc-eQTL 5.91e-01 0.0512 0.095 0.599 B_Intermediate L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.56e-01 -0.0474 0.0804 0.599 B_Intermediate L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 8.26e-01 -0.0211 0.0958 0.599 B_Intermediate L2
ENSG00000162607 USP1 353725 sc-eQTL 6.84e-01 0.039 0.0956 0.599 B_Intermediate L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 1.87e-01 -0.125 0.0945 0.599 B_Intermediate L2
ENSG00000079739 PGM1 -803389 sc-eQTL 7.51e-01 -0.0304 0.0956 0.597 B_Memory L2
ENSG00000088035 ALG6 -577553 sc-eQTL 5.23e-01 -0.062 0.0971 0.597 B_Memory L2
ENSG00000116641 DOCK7 101636 sc-eQTL 5.17e-01 0.0591 0.091 0.597 B_Memory L2
ENSG00000125703 ATG4C 5890 sc-eQTL 8.92e-01 -0.0117 0.0866 0.597 B_Memory L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 9.88e-01 0.00149 0.0991 0.597 B_Memory L2
ENSG00000162607 USP1 353725 sc-eQTL 4.46e-01 0.0763 0.0998 0.597 B_Memory L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 5.32e-01 0.0616 0.0983 0.597 B_Memory L2
ENSG00000079739 PGM1 -803389 sc-eQTL 8.61e-01 0.0168 0.096 0.598 B_Naive1 L2
ENSG00000088035 ALG6 -577553 sc-eQTL 5.78e-01 0.0536 0.0963 0.598 B_Naive1 L2
ENSG00000116641 DOCK7 101636 sc-eQTL 2.15e-01 -0.114 0.092 0.598 B_Naive1 L2
ENSG00000125703 ATG4C 5890 sc-eQTL 3.93e-02 0.146 0.0704 0.598 B_Naive1 L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 3.87e-01 -0.0817 0.0942 0.598 B_Naive1 L2
ENSG00000162607 USP1 353725 sc-eQTL 2.72e-01 -0.0912 0.0827 0.598 B_Naive1 L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 1.84e-01 -0.134 0.1 0.598 B_Naive1 L2
ENSG00000079739 PGM1 -803389 sc-eQTL 3.62e-01 0.0868 0.095 0.599 B_Naive2 L2
ENSG00000088035 ALG6 -577553 sc-eQTL 2.45e-01 -0.115 0.0989 0.599 B_Naive2 L2
ENSG00000116641 DOCK7 101636 sc-eQTL 7.14e-01 0.035 0.0954 0.599 B_Naive2 L2
ENSG00000125703 ATG4C 5890 sc-eQTL 9.35e-01 -0.00745 0.0918 0.599 B_Naive2 L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 9.21e-01 -0.00983 0.0996 0.599 B_Naive2 L2
ENSG00000162607 USP1 353725 sc-eQTL 8.47e-01 0.0183 0.0948 0.599 B_Naive2 L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 6.40e-01 -0.0464 0.099 0.599 B_Naive2 L2
ENSG00000079739 PGM1 -803389 sc-eQTL 2.99e-02 -0.207 0.0945 0.591 CD4_CTL L2
ENSG00000088035 ALG6 -577553 sc-eQTL 9.50e-01 0.00639 0.101 0.591 CD4_CTL L2
ENSG00000116641 DOCK7 101636 sc-eQTL 1.52e-01 0.127 0.088 0.591 CD4_CTL L2
ENSG00000125703 ATG4C 5890 sc-eQTL 8.88e-01 0.0129 0.0915 0.591 CD4_CTL L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 1.85e-02 0.229 0.0965 0.591 CD4_CTL L2
ENSG00000162607 USP1 353725 sc-eQTL 8.88e-01 0.0131 0.0931 0.591 CD4_CTL L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 4.67e-01 -0.0677 0.0928 0.591 CD4_CTL L2
ENSG00000079739 PGM1 -803389 sc-eQTL 3.12e-01 0.0778 0.0767 0.598 CD4_Naive L2
ENSG00000088035 ALG6 -577553 sc-eQTL 8.22e-01 0.0188 0.0835 0.598 CD4_Naive L2
ENSG00000116641 DOCK7 101636 sc-eQTL 8.08e-01 -0.02 0.0821 0.598 CD4_Naive L2
ENSG00000125703 ATG4C 5890 sc-eQTL 9.24e-01 0.00695 0.0726 0.598 CD4_Naive L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 7.70e-01 -0.026 0.0887 0.598 CD4_Naive L2
ENSG00000162607 USP1 353725 sc-eQTL 3.93e-01 0.0579 0.0677 0.598 CD4_Naive L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 1.43e-02 0.214 0.0868 0.598 CD4_Naive L2
ENSG00000079739 PGM1 -803389 sc-eQTL 7.31e-01 0.0276 0.0803 0.598 CD4_TCM L2
ENSG00000088035 ALG6 -577553 sc-eQTL 1.08e-01 -0.15 0.0927 0.598 CD4_TCM L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.97e-01 -0.000314 0.0827 0.598 CD4_TCM L2
ENSG00000125703 ATG4C 5890 sc-eQTL 6.28e-01 0.0391 0.0805 0.598 CD4_TCM L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 4.03e-01 0.0794 0.0947 0.598 CD4_TCM L2
ENSG00000162607 USP1 353725 sc-eQTL 8.60e-01 -0.0137 0.0778 0.598 CD4_TCM L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 4.13e-01 0.0753 0.0917 0.598 CD4_TCM L2
ENSG00000079739 PGM1 -803389 sc-eQTL 7.16e-01 0.0344 0.0945 0.598 CD4_TEM L2
ENSG00000088035 ALG6 -577553 sc-eQTL 3.41e-01 -0.0905 0.0948 0.598 CD4_TEM L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.86e-01 -0.00161 0.0926 0.598 CD4_TEM L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.27e-01 0.0569 0.0899 0.598 CD4_TEM L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 7.38e-01 0.0312 0.0928 0.598 CD4_TEM L2
ENSG00000162607 USP1 353725 sc-eQTL 7.42e-01 0.0289 0.0879 0.598 CD4_TEM L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 2.53e-01 -0.11 0.0959 0.598 CD4_TEM L2
ENSG00000079739 PGM1 -803389 sc-eQTL 1.91e-01 0.113 0.086 0.598 CD8_CTL L2
ENSG00000088035 ALG6 -577553 sc-eQTL 4.49e-01 -0.0694 0.0917 0.598 CD8_CTL L2
ENSG00000116641 DOCK7 101636 sc-eQTL 1.87e-01 0.115 0.0867 0.598 CD8_CTL L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.42e-02 0.178 0.0919 0.598 CD8_CTL L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 7.59e-01 -0.0296 0.0964 0.598 CD8_CTL L2
ENSG00000162607 USP1 353725 sc-eQTL 8.41e-01 0.0173 0.0863 0.598 CD8_CTL L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 4.22e-01 0.0793 0.0986 0.598 CD8_CTL L2
ENSG00000079739 PGM1 -803389 sc-eQTL 9.21e-01 0.00869 0.088 0.598 CD8_Naive L2
ENSG00000088035 ALG6 -577553 sc-eQTL 4.56e-01 -0.0679 0.0909 0.598 CD8_Naive L2
ENSG00000116641 DOCK7 101636 sc-eQTL 2.21e-02 -0.214 0.093 0.598 CD8_Naive L2
ENSG00000125703 ATG4C 5890 sc-eQTL 2.18e-01 0.111 0.09 0.598 CD8_Naive L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 6.28e-01 0.0444 0.0915 0.598 CD8_Naive L2
ENSG00000162607 USP1 353725 sc-eQTL 9.47e-01 0.00515 0.0774 0.598 CD8_Naive L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 5.36e-01 0.0535 0.0862 0.598 CD8_Naive L2
ENSG00000079739 PGM1 -803389 sc-eQTL 3.17e-03 -0.286 0.0958 0.595 CD8_TCM L2
ENSG00000088035 ALG6 -577553 sc-eQTL 1.29e-01 0.15 0.0986 0.595 CD8_TCM L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.70e-01 0.00365 0.0968 0.595 CD8_TCM L2
ENSG00000125703 ATG4C 5890 sc-eQTL 8.86e-01 -0.0142 0.099 0.595 CD8_TCM L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 2.93e-01 0.101 0.096 0.595 CD8_TCM L2
ENSG00000162607 USP1 353725 sc-eQTL 9.23e-01 0.00901 0.0926 0.595 CD8_TCM L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 1.54e-02 0.236 0.0966 0.595 CD8_TCM L2
ENSG00000079739 PGM1 -803389 sc-eQTL 5.67e-01 0.0578 0.101 0.603 CD8_TEM L2
ENSG00000088035 ALG6 -577553 sc-eQTL 6.65e-02 0.185 0.1 0.603 CD8_TEM L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.59e-01 0.00506 0.0979 0.603 CD8_TEM L2
ENSG00000125703 ATG4C 5890 sc-eQTL 6.87e-02 0.171 0.0934 0.603 CD8_TEM L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 5.03e-01 0.0683 0.102 0.603 CD8_TEM L2
ENSG00000162607 USP1 353725 sc-eQTL 3.21e-01 -0.0965 0.097 0.603 CD8_TEM L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 9.86e-01 0.00168 0.0988 0.603 CD8_TEM L2
ENSG00000079739 PGM1 -803389 sc-eQTL 1.23e-01 -0.141 0.0913 0.595 MAIT L2
ENSG00000088035 ALG6 -577553 sc-eQTL 8.81e-01 0.0136 0.0909 0.595 MAIT L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.19e-01 -0.00889 0.0871 0.595 MAIT L2
ENSG00000125703 ATG4C 5890 sc-eQTL 4.18e-02 0.186 0.0909 0.595 MAIT L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 8.00e-01 -0.0234 0.092 0.595 MAIT L2
ENSG00000162607 USP1 353725 sc-eQTL 3.35e-01 0.0879 0.0911 0.595 MAIT L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 3.81e-01 0.0829 0.0946 0.595 MAIT L2
ENSG00000079739 PGM1 -803389 sc-eQTL 7.77e-01 -0.0265 0.0934 0.596 NK_CD56bright L2
ENSG00000088035 ALG6 -577553 sc-eQTL 7.83e-01 -0.0263 0.0957 0.596 NK_CD56bright L2
ENSG00000116641 DOCK7 101636 sc-eQTL 1.35e-01 -0.124 0.0825 0.596 NK_CD56bright L2
ENSG00000125703 ATG4C 5890 sc-eQTL 2.30e-01 -0.111 0.0923 0.596 NK_CD56bright L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 6.89e-01 -0.0387 0.0964 0.596 NK_CD56bright L2
ENSG00000162607 USP1 353725 sc-eQTL 4.52e-01 0.0748 0.0994 0.596 NK_CD56bright L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 1.29e-01 -0.144 0.0946 0.596 NK_CD56bright L2
ENSG00000079739 PGM1 -803389 sc-eQTL 2.38e-01 -0.0876 0.0741 0.597 NK_CD56dim L2
ENSG00000088035 ALG6 -577553 sc-eQTL 5.30e-01 -0.0592 0.0942 0.597 NK_CD56dim L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.52e-02 0.137 0.0815 0.597 NK_CD56dim L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.05e-01 -0.0556 0.0833 0.597 NK_CD56dim L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 8.67e-01 -0.0159 0.0948 0.597 NK_CD56dim L2
ENSG00000162607 USP1 353725 sc-eQTL 7.67e-01 -0.0273 0.092 0.597 NK_CD56dim L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 9.30e-01 0.00898 0.102 0.597 NK_CD56dim L2
ENSG00000079739 PGM1 -803389 sc-eQTL 2.68e-01 0.11 0.0989 0.605 NK_HLA L2
ENSG00000088035 ALG6 -577553 sc-eQTL 4.90e-01 -0.0711 0.103 0.605 NK_HLA L2
ENSG00000116641 DOCK7 101636 sc-eQTL 4.86e-01 0.0548 0.0786 0.605 NK_HLA L2
ENSG00000125703 ATG4C 5890 sc-eQTL 1.70e-01 0.125 0.091 0.605 NK_HLA L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 8.62e-01 0.0167 0.096 0.605 NK_HLA L2
ENSG00000162607 USP1 353725 sc-eQTL 9.75e-01 0.00321 0.101 0.605 NK_HLA L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 3.78e-01 0.0806 0.0913 0.605 NK_HLA L2
ENSG00000079739 PGM1 -803389 sc-eQTL 2.78e-01 0.0873 0.0802 0.597 NK_cytokine L2
ENSG00000088035 ALG6 -577553 sc-eQTL 6.92e-02 0.165 0.0902 0.597 NK_cytokine L2
ENSG00000116641 DOCK7 101636 sc-eQTL 1.83e-01 0.112 0.0838 0.597 NK_cytokine L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.62e-01 0.05 0.0861 0.597 NK_cytokine L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 7.82e-01 -0.0247 0.0892 0.597 NK_cytokine L2
ENSG00000162607 USP1 353725 sc-eQTL 3.96e-01 -0.0797 0.0936 0.597 NK_cytokine L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 2.80e-01 0.103 0.0948 0.597 NK_cytokine L2
ENSG00000079739 PGM1 -803389 sc-eQTL 7.82e-01 0.0297 0.107 0.6 PB L2
ENSG00000088035 ALG6 -577553 sc-eQTL 7.23e-01 -0.0399 0.112 0.6 PB L2
ENSG00000116641 DOCK7 101636 sc-eQTL 8.06e-01 -0.0296 0.12 0.6 PB L2
ENSG00000125703 ATG4C 5890 sc-eQTL 2.13e-01 0.13 0.104 0.6 PB L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 7.20e-01 -0.0376 0.105 0.6 PB L2
ENSG00000162607 USP1 353725 sc-eQTL 8.25e-01 0.0231 0.104 0.6 PB L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 5.05e-01 0.0767 0.115 0.6 PB L2
ENSG00000079739 PGM1 -803389 sc-eQTL 8.90e-01 -0.012 0.0863 0.598 Pro_T L2
ENSG00000088035 ALG6 -577553 sc-eQTL 7.44e-01 0.0287 0.0877 0.598 Pro_T L2
ENSG00000116641 DOCK7 101636 sc-eQTL 2.80e-01 0.0952 0.0878 0.598 Pro_T L2
ENSG00000125703 ATG4C 5890 sc-eQTL 6.09e-01 0.0394 0.077 0.598 Pro_T L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 2.85e-02 -0.169 0.0764 0.598 Pro_T L2
ENSG00000162607 USP1 353725 sc-eQTL 7.03e-01 0.0203 0.0532 0.598 Pro_T L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 1.24e-01 0.138 0.0893 0.598 Pro_T L2
ENSG00000079739 PGM1 -803389 sc-eQTL 7.62e-01 -0.0277 0.0913 0.598 Treg L2
ENSG00000088035 ALG6 -577553 sc-eQTL 9.96e-01 -0.000456 0.0976 0.598 Treg L2
ENSG00000116641 DOCK7 101636 sc-eQTL 5.12e-01 0.0587 0.0895 0.598 Treg L2
ENSG00000125703 ATG4C 5890 sc-eQTL 8.93e-01 0.0123 0.0916 0.598 Treg L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 2.08e-01 0.12 0.0955 0.598 Treg L2
ENSG00000162607 USP1 353725 sc-eQTL 6.66e-01 -0.04 0.0927 0.598 Treg L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 9.26e-01 0.0085 0.0917 0.598 Treg L2
ENSG00000079739 PGM1 -803389 sc-eQTL 3.15e-01 -0.0914 0.0908 0.593 cDC L2
ENSG00000088035 ALG6 -577553 sc-eQTL 6.59e-02 -0.169 0.0915 0.593 cDC L2
ENSG00000116641 DOCK7 101636 sc-eQTL 4.59e-01 0.0671 0.0905 0.593 cDC L2
ENSG00000125703 ATG4C 5890 sc-eQTL 3.65e-01 -0.0712 0.0785 0.593 cDC L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 6.64e-01 0.0433 0.0997 0.593 cDC L2
ENSG00000162607 USP1 353725 sc-eQTL 5.94e-01 0.0474 0.0887 0.593 cDC L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 9.29e-01 0.00711 0.0801 0.593 cDC L2
ENSG00000079739 PGM1 -803389 sc-eQTL 2.71e-01 0.0937 0.0848 0.598 cMono_IL1B L2
ENSG00000088035 ALG6 -577553 sc-eQTL 1.01e-01 -0.139 0.0846 0.598 cMono_IL1B L2
ENSG00000116641 DOCK7 101636 sc-eQTL 4.59e-01 0.0666 0.0897 0.598 cMono_IL1B L2
ENSG00000125703 ATG4C 5890 sc-eQTL 3.90e-01 0.0543 0.0631 0.598 cMono_IL1B L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 4.33e-01 0.0702 0.0893 0.598 cMono_IL1B L2
ENSG00000162607 USP1 353725 sc-eQTL 8.94e-01 -0.0106 0.0789 0.598 cMono_IL1B L2
ENSG00000240563 L1TD1 595173 sc-eQTL 8.39e-01 -0.0161 0.0793 0.598 cMono_IL1B L2
ENSG00000079739 PGM1 -803389 sc-eQTL 4.72e-01 0.0677 0.094 0.598 cMono_S100A L2
ENSG00000088035 ALG6 -577553 sc-eQTL 1.50e-01 -0.137 0.0949 0.598 cMono_S100A L2
ENSG00000116641 DOCK7 101636 sc-eQTL 4.74e-01 0.0634 0.0883 0.598 cMono_S100A L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.12e-01 0.0502 0.0765 0.598 cMono_S100A L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 2.93e-01 0.0908 0.0862 0.598 cMono_S100A L2
ENSG00000162607 USP1 353725 sc-eQTL 5.65e-01 -0.0512 0.0889 0.598 cMono_S100A L2
ENSG00000240563 L1TD1 595173 sc-eQTL 5.43e-01 0.0451 0.0739 0.598 cMono_S100A L2
ENSG00000079739 PGM1 -803389 sc-eQTL 3.79e-01 -0.0948 0.107 0.594 gdT L2
ENSG00000088035 ALG6 -577553 sc-eQTL 7.13e-01 -0.0423 0.115 0.594 gdT L2
ENSG00000116641 DOCK7 101636 sc-eQTL 6.67e-01 0.0484 0.112 0.594 gdT L2
ENSG00000125703 ATG4C 5890 sc-eQTL 4.10e-01 -0.0886 0.107 0.594 gdT L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 5.08e-01 -0.0757 0.114 0.594 gdT L2
ENSG00000162607 USP1 353725 sc-eQTL 2.58e-01 -0.122 0.108 0.594 gdT L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 8.56e-01 -0.0204 0.112 0.594 gdT L2
ENSG00000079739 PGM1 -803389 sc-eQTL 6.09e-01 0.0479 0.0936 0.6 intMono L2
ENSG00000088035 ALG6 -577553 sc-eQTL 5.53e-01 0.0518 0.0872 0.6 intMono L2
ENSG00000116641 DOCK7 101636 sc-eQTL 2.76e-01 0.097 0.0888 0.6 intMono L2
ENSG00000125703 ATG4C 5890 sc-eQTL 8.65e-01 -0.0145 0.085 0.6 intMono L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 6.63e-01 0.0408 0.0936 0.6 intMono L2
ENSG00000162607 USP1 353725 sc-eQTL 3.81e-01 -0.0835 0.0951 0.6 intMono L2
ENSG00000240563 L1TD1 595173 sc-eQTL 3.36e-01 -0.0674 0.0699 0.6 intMono L2
ENSG00000079739 PGM1 -803389 sc-eQTL 9.69e-01 -0.00334 0.086 0.604 ncMono L2
ENSG00000088035 ALG6 -577553 sc-eQTL 4.03e-01 0.079 0.0943 0.604 ncMono L2
ENSG00000116641 DOCK7 101636 sc-eQTL 9.40e-01 -0.00697 0.093 0.604 ncMono L2
ENSG00000125703 ATG4C 5890 sc-eQTL 2.87e-01 0.0925 0.0866 0.604 ncMono L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 5.17e-01 0.0589 0.0908 0.604 ncMono L2
ENSG00000162607 USP1 353725 sc-eQTL 8.04e-01 -0.0231 0.0928 0.604 ncMono L2
ENSG00000240563 L1TD1 595173 sc-eQTL 3.19e-01 -0.0656 0.0657 0.604 ncMono L2
ENSG00000079739 PGM1 -803389 sc-eQTL 4.77e-01 -0.073 0.102 0.599 pDC L2
ENSG00000088035 ALG6 -577553 sc-eQTL 5.52e-02 0.191 0.0988 0.599 pDC L2
ENSG00000116641 DOCK7 101636 sc-eQTL 6.18e-01 -0.0509 0.102 0.599 pDC L2
ENSG00000125703 ATG4C 5890 sc-eQTL 5.16e-01 0.0595 0.0915 0.599 pDC L2
ENSG00000142856 ITGB3BP -803699 sc-eQTL 7.76e-02 -0.181 0.102 0.599 pDC L2
ENSG00000162607 USP1 353725 sc-eQTL 2.59e-01 0.118 0.104 0.599 pDC L2
ENSG00000203965 EFCAB7 -733350 sc-eQTL 7.32e-01 -0.0312 0.091 0.599 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -803389 sc-eQTL 5.23e-01 -0.0581 0.0909 0.598 B_Memory LOneK1K
ENSG00000088035 ALG6 -577553 sc-eQTL 2.33e-01 -0.12 0.1 0.598 B_Memory LOneK1K
ENSG00000116641 DOCK7 101636 sc-eQTL 1.91e-01 0.114 0.087 0.598 B_Memory LOneK1K
ENSG00000125703 ATG4C 5890 sc-eQTL 5.65e-01 -0.0406 0.0705 0.598 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -803699 sc-eQTL 3.60e-01 -0.0848 0.0926 0.598 B_Memory LOneK1K
ENSG00000162607 USP1 353725 sc-eQTL 2.54e-01 0.103 0.0898 0.598 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -733350 sc-eQTL 6.20e-01 -0.048 0.0966 0.598 B_Memory LOneK1K
ENSG00000079739 PGM1 -803389 sc-eQTL 5.76e-01 0.0522 0.0931 0.598 B_Naive LOneK1K
ENSG00000088035 ALG6 -577553 sc-eQTL 9.15e-01 0.0102 0.0959 0.598 B_Naive LOneK1K
ENSG00000116641 DOCK7 101636 sc-eQTL 5.57e-01 -0.0527 0.0895 0.598 B_Naive LOneK1K
ENSG00000125703 ATG4C 5890 sc-eQTL 3.73e-02 0.142 0.0676 0.598 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -803699 sc-eQTL 4.61e-01 -0.0713 0.0965 0.598 B_Naive LOneK1K
ENSG00000162607 USP1 353725 sc-eQTL 5.26e-01 -0.0527 0.0829 0.598 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -733350 sc-eQTL 2.30e-01 -0.116 0.0968 0.598 B_Naive LOneK1K
ENSG00000079739 PGM1 -803389 sc-eQTL 3.38e-01 0.083 0.0866 0.598 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -577553 sc-eQTL 4.25e-02 -0.17 0.0832 0.598 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 101636 sc-eQTL 3.63e-01 0.0769 0.0844 0.598 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 5890 sc-eQTL 2.02e-01 0.0745 0.0582 0.598 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -803699 sc-eQTL 2.38e-01 0.102 0.0862 0.598 CD14_Mono LOneK1K
ENSG00000162607 USP1 353725 sc-eQTL 5.16e-01 -0.048 0.0738 0.598 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 595173 sc-eQTL 7.82e-01 0.0222 0.0801 0.598 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -803389 sc-eQTL 5.10e-01 0.0547 0.0828 0.599 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -577553 sc-eQTL 2.96e-01 0.0983 0.0939 0.599 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 101636 sc-eQTL 4.60e-01 0.0689 0.093 0.599 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 5890 sc-eQTL 6.81e-01 0.0327 0.0794 0.599 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -803699 sc-eQTL 3.68e-01 0.083 0.092 0.599 CD16_Mono LOneK1K
ENSG00000162607 USP1 353725 sc-eQTL 3.15e-01 -0.0871 0.0864 0.599 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 595173 sc-eQTL 6.85e-02 -0.107 0.0586 0.599 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -803389 sc-eQTL 6.05e-01 0.0377 0.0727 0.597 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -577553 sc-eQTL 8.95e-01 0.0115 0.0874 0.597 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 101636 sc-eQTL 1.65e-02 0.187 0.0772 0.597 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 5890 sc-eQTL 9.46e-01 -0.00526 0.0781 0.597 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -803699 sc-eQTL 9.18e-01 0.00959 0.0926 0.597 NK_CD56dim LOneK1K
ENSG00000162607 USP1 353725 sc-eQTL 2.53e-01 -0.0961 0.0838 0.597 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -733350 sc-eQTL 4.93e-01 0.0701 0.102 0.597 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 101654 eQTL 8.46e-12 0.151 0.0218 0.0 0.0 0.374
ENSG00000125703 ATG4C 5890 eQTL 1.26e-05 0.0738 0.0168 0.00674 0.00658 0.374
ENSG00000132855 ANGPTL3 192535 pQTL 0.000864 0.0992 0.0297 0.0 0.0 0.381
ENSG00000142856 ITGB3BP -803699 eQTL 0.00314 -0.0873 0.0295 0.0 0.0 0.374
ENSG00000162607 USP1 353725 eQTL 0.00039 0.046 0.0129 0.0 0.0 0.374

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 101654 5.58e-06 8.42e-06 7.17e-07 5.5e-06 1.82e-06 3.41e-06 9.53e-06 1.81e-06 6.09e-06 4.33e-06 9.93e-06 5.06e-06 1.13e-05 4e-06 1.69e-06 5.06e-06 3.61e-06 3.85e-06 1.93e-06 2.51e-06 3.19e-06 6.81e-06 5.31e-06 2.85e-06 1.01e-05 2.45e-06 3.57e-06 3.16e-06 6.83e-06 6.62e-06 3.94e-06 7.36e-07 8.25e-07 3.26e-06 4.62e-06 2.05e-06 1.72e-06 1.45e-06 1.46e-06 9.68e-07 1.02e-06 8.54e-06 7.69e-07 1.59e-07 7.72e-07 1.31e-06 1.06e-06 7.47e-07 5.73e-07
ENSG00000125703 ATG4C 5890 4.42e-05 3.92e-05 7.85e-06 1.91e-05 8.4e-06 1.87e-05 5.61e-05 7.09e-06 4.58e-05 2.29e-05 5.53e-05 2.48e-05 6.54e-05 1.89e-05 9.71e-06 2.92e-05 2.53e-05 3.58e-05 1.09e-05 9.54e-06 2.32e-05 4.82e-05 3.98e-05 1.24e-05 5.96e-05 1.31e-05 2.05e-05 1.93e-05 4.16e-05 3.24e-05 2.96e-05 2.6e-06 4.74e-06 8.99e-06 1.54e-05 8.07e-06 4.39e-06 4.65e-06 7.07e-06 4.15e-06 1.96e-06 4.56e-05 4.84e-06 5.27e-07 3.42e-06 5.54e-06 6.15e-06 2.71e-06 1.84e-06
ENSG00000142856 ITGB3BP -803699 2.76e-07 1.33e-07 5.91e-08 2.25e-07 1.03e-07 8.45e-08 1.81e-07 5.78e-08 1.47e-07 6.75e-08 1.67e-07 1.23e-07 1.71e-07 8.07e-08 5.43e-08 7.97e-08 4.24e-08 1.51e-07 7.29e-08 5.07e-08 1.25e-07 1.26e-07 1.44e-07 3.22e-08 1.72e-07 1.26e-07 1.17e-07 1.04e-07 1.24e-07 1.07e-07 1.06e-07 3.55e-08 3.59e-08 9.5e-08 7.44e-08 3.05e-08 6.14e-08 8.51e-08 6.28e-08 4.41e-08 5.8e-08 1.46e-07 5.08e-08 1.55e-08 4.7e-08 1.71e-08 8.46e-08 0.0 4.82e-08
ENSG00000162607 USP1 353725 1.3e-06 9.47e-07 3.35e-07 1.3e-06 2.98e-07 5.92e-07 1.47e-06 4.01e-07 1.25e-06 4.48e-07 1.67e-06 7.63e-07 2.02e-06 2.77e-07 5.22e-07 7.95e-07 7.88e-07 5.36e-07 8.35e-07 6.55e-07 4.19e-07 1.12e-06 7.76e-07 6.51e-07 2.1e-06 3.59e-07 8.36e-07 7.16e-07 1.23e-06 1.23e-06 5.48e-07 1.86e-07 2.34e-07 5.79e-07 6.29e-07 4.46e-07 6.99e-07 2.29e-07 4.2e-07 2.8e-07 2.72e-07 1.47e-06 5.94e-08 1.25e-07 1.82e-07 1.24e-07 2.2e-07 1.41e-07 8.38e-08