logo

Genes within 1Mb (chr1:62750950:T:TA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -842461 sc-eQTL 4.62e-01 0.0583 0.0791 0.598 B L1
ENSG00000088035 ALG6 -616625 sc-eQTL 6.31e-01 -0.0394 0.0821 0.598 B L1
ENSG00000116641 DOCK7 62564 sc-eQTL 6.07e-01 -0.0422 0.0821 0.598 B L1
ENSG00000125703 ATG4C -33182 sc-eQTL 3.60e-01 0.0523 0.057 0.598 B L1
ENSG00000142856 ITGB3BP -842771 sc-eQTL 3.32e-01 -0.0881 0.0906 0.598 B L1
ENSG00000162607 USP1 314653 sc-eQTL 7.61e-01 0.024 0.0788 0.598 B L1
ENSG00000203965 EFCAB7 -772422 sc-eQTL 1.88e-01 -0.122 0.0927 0.598 B L1
ENSG00000079739 PGM1 -842461 sc-eQTL 6.94e-01 0.0266 0.0677 0.598 CD4T L1
ENSG00000088035 ALG6 -616625 sc-eQTL 5.93e-01 -0.04 0.0747 0.598 CD4T L1
ENSG00000116641 DOCK7 62564 sc-eQTL 5.70e-01 0.0431 0.0756 0.598 CD4T L1
ENSG00000125703 ATG4C -33182 sc-eQTL 5.12e-01 0.0401 0.061 0.598 CD4T L1
ENSG00000142856 ITGB3BP -842771 sc-eQTL 4.84e-01 0.0608 0.0867 0.598 CD4T L1
ENSG00000162607 USP1 314653 sc-eQTL 7.44e-01 0.0194 0.0593 0.598 CD4T L1
ENSG00000203965 EFCAB7 -772422 sc-eQTL 1.06e-01 0.125 0.0774 0.598 CD4T L1
ENSG00000079739 PGM1 -842461 sc-eQTL 9.30e-01 0.00657 0.0751 0.598 CD8T L1
ENSG00000088035 ALG6 -616625 sc-eQTL 6.07e-01 -0.0426 0.0828 0.598 CD8T L1
ENSG00000116641 DOCK7 62564 sc-eQTL 8.56e-01 -0.0152 0.0839 0.598 CD8T L1
ENSG00000125703 ATG4C -33182 sc-eQTL 3.00e-02 0.172 0.0788 0.598 CD8T L1
ENSG00000142856 ITGB3BP -842771 sc-eQTL 5.88e-01 0.0483 0.0891 0.598 CD8T L1
ENSG00000162607 USP1 314653 sc-eQTL 6.78e-01 -0.0289 0.0694 0.598 CD8T L1
ENSG00000203965 EFCAB7 -772422 sc-eQTL 6.10e-01 0.0454 0.0888 0.598 CD8T L1
ENSG00000079739 PGM1 -842461 sc-eQTL 3.96e-01 -0.0713 0.0838 0.597 DC L1
ENSG00000088035 ALG6 -616625 sc-eQTL 9.10e-01 0.00983 0.0867 0.597 DC L1
ENSG00000116641 DOCK7 62564 sc-eQTL 8.57e-01 0.016 0.0888 0.597 DC L1
ENSG00000125703 ATG4C -33182 sc-eQTL 6.98e-01 -0.027 0.0695 0.597 DC L1
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.77e-01 -0.00285 0.0971 0.597 DC L1
ENSG00000162607 USP1 314653 sc-eQTL 7.71e-01 0.0248 0.0848 0.597 DC L1
ENSG00000203965 EFCAB7 -772422 sc-eQTL 4.59e-01 -0.0626 0.0844 0.597 DC L1
ENSG00000079739 PGM1 -842461 sc-eQTL 2.62e-01 0.0915 0.0813 0.598 Mono L1
ENSG00000088035 ALG6 -616625 sc-eQTL 5.94e-02 -0.16 0.0843 0.598 Mono L1
ENSG00000116641 DOCK7 62564 sc-eQTL 2.07e-01 0.104 0.0819 0.598 Mono L1
ENSG00000125703 ATG4C -33182 sc-eQTL 1.95e-01 0.0719 0.0554 0.598 Mono L1
ENSG00000142856 ITGB3BP -842771 sc-eQTL 4.76e-01 0.0627 0.0878 0.598 Mono L1
ENSG00000162607 USP1 314653 sc-eQTL 5.50e-01 -0.0431 0.0721 0.598 Mono L1
ENSG00000240563 L1TD1 556101 sc-eQTL 2.91e-01 -0.0712 0.0672 0.598 Mono L1
ENSG00000079739 PGM1 -842461 sc-eQTL 4.81e-01 0.0499 0.0706 0.599 NK L1
ENSG00000088035 ALG6 -616625 sc-eQTL 9.61e-01 0.00404 0.0829 0.599 NK L1
ENSG00000116641 DOCK7 62564 sc-eQTL 7.26e-02 0.122 0.0678 0.599 NK L1
ENSG00000125703 ATG4C -33182 sc-eQTL 9.55e-01 -0.00412 0.0733 0.599 NK L1
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.83e-01 -0.00197 0.0912 0.599 NK L1
ENSG00000162607 USP1 314653 sc-eQTL 6.21e-01 -0.0404 0.0814 0.599 NK L1
ENSG00000203965 EFCAB7 -772422 sc-eQTL 8.43e-01 -0.0196 0.099 0.599 NK L1
ENSG00000079739 PGM1 -842461 sc-eQTL 3.25e-01 -0.0775 0.0786 0.598 Other_T L1
ENSG00000088035 ALG6 -616625 sc-eQTL 3.32e-01 0.0769 0.079 0.598 Other_T L1
ENSG00000116641 DOCK7 62564 sc-eQTL 6.43e-01 0.0375 0.0808 0.598 Other_T L1
ENSG00000125703 ATG4C -33182 sc-eQTL 4.44e-03 0.197 0.0687 0.598 Other_T L1
ENSG00000142856 ITGB3BP -842771 sc-eQTL 2.23e-01 -0.0757 0.0618 0.598 Other_T L1
ENSG00000162607 USP1 314653 sc-eQTL 9.83e-01 -0.00117 0.0538 0.598 Other_T L1
ENSG00000203965 EFCAB7 -772422 sc-eQTL 3.38e-01 0.0917 0.0956 0.598 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -842461 sc-eQTL 9.28e-01 -0.00994 0.109 0.597 B_Activated L2
ENSG00000088035 ALG6 -616625 sc-eQTL 5.39e-01 -0.0644 0.105 0.597 B_Activated L2
ENSG00000116641 DOCK7 62564 sc-eQTL 8.86e-01 -0.0139 0.0975 0.597 B_Activated L2
ENSG00000125703 ATG4C -33182 sc-eQTL 6.35e-01 -0.0487 0.103 0.597 B_Activated L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 5.15e-02 -0.194 0.0991 0.597 B_Activated L2
ENSG00000162607 USP1 314653 sc-eQTL 8.37e-01 0.0223 0.109 0.597 B_Activated L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 6.87e-01 0.0383 0.0948 0.597 B_Activated L2
ENSG00000079739 PGM1 -842461 sc-eQTL 6.07e-01 -0.0498 0.0968 0.599 B_Intermediate L2
ENSG00000088035 ALG6 -616625 sc-eQTL 3.70e-01 -0.0882 0.0982 0.599 B_Intermediate L2
ENSG00000116641 DOCK7 62564 sc-eQTL 7.50e-01 0.03 0.0939 0.599 B_Intermediate L2
ENSG00000125703 ATG4C -33182 sc-eQTL 6.32e-01 -0.0381 0.0795 0.599 B_Intermediate L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.29e-01 -0.00842 0.0947 0.599 B_Intermediate L2
ENSG00000162607 USP1 314653 sc-eQTL 6.87e-01 0.0382 0.0946 0.599 B_Intermediate L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 1.56e-01 -0.133 0.0934 0.599 B_Intermediate L2
ENSG00000079739 PGM1 -842461 sc-eQTL 9.42e-01 -0.00689 0.0944 0.597 B_Memory L2
ENSG00000088035 ALG6 -616625 sc-eQTL 6.67e-01 -0.0413 0.0959 0.597 B_Memory L2
ENSG00000116641 DOCK7 62564 sc-eQTL 6.18e-01 0.0449 0.09 0.597 B_Memory L2
ENSG00000125703 ATG4C -33182 sc-eQTL 9.29e-01 -0.00765 0.0855 0.597 B_Memory L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.66e-01 -0.00415 0.0979 0.597 B_Memory L2
ENSG00000162607 USP1 314653 sc-eQTL 4.14e-01 0.0806 0.0986 0.597 B_Memory L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 8.08e-01 0.0237 0.0972 0.597 B_Memory L2
ENSG00000079739 PGM1 -842461 sc-eQTL 7.47e-01 0.0306 0.095 0.598 B_Naive1 L2
ENSG00000088035 ALG6 -616625 sc-eQTL 5.97e-01 0.0504 0.0953 0.598 B_Naive1 L2
ENSG00000116641 DOCK7 62564 sc-eQTL 1.45e-01 -0.133 0.0909 0.598 B_Naive1 L2
ENSG00000125703 ATG4C -33182 sc-eQTL 3.07e-02 0.151 0.0696 0.598 B_Naive1 L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 4.98e-01 -0.0633 0.0933 0.598 B_Naive1 L2
ENSG00000162607 USP1 314653 sc-eQTL 3.24e-01 -0.0809 0.0819 0.598 B_Naive1 L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 2.19e-01 -0.122 0.0993 0.598 B_Naive1 L2
ENSG00000079739 PGM1 -842461 sc-eQTL 3.32e-01 0.0914 0.094 0.599 B_Naive2 L2
ENSG00000088035 ALG6 -616625 sc-eQTL 3.36e-01 -0.0945 0.098 0.599 B_Naive2 L2
ENSG00000116641 DOCK7 62564 sc-eQTL 6.80e-01 0.0391 0.0944 0.599 B_Naive2 L2
ENSG00000125703 ATG4C -33182 sc-eQTL 8.46e-01 -0.0176 0.0909 0.599 B_Naive2 L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.75e-01 -0.00305 0.0986 0.599 B_Naive2 L2
ENSG00000162607 USP1 314653 sc-eQTL 8.20e-01 0.0214 0.0939 0.599 B_Naive2 L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 7.75e-01 -0.0281 0.0981 0.599 B_Naive2 L2
ENSG00000079739 PGM1 -842461 sc-eQTL 4.84e-02 -0.186 0.0934 0.591 CD4_CTL L2
ENSG00000088035 ALG6 -616625 sc-eQTL 8.63e-01 0.0173 0.0997 0.591 CD4_CTL L2
ENSG00000116641 DOCK7 62564 sc-eQTL 1.43e-01 0.128 0.0867 0.591 CD4_CTL L2
ENSG00000125703 ATG4C -33182 sc-eQTL 7.17e-01 0.0328 0.0902 0.591 CD4_CTL L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 2.33e-02 0.218 0.0952 0.591 CD4_CTL L2
ENSG00000162607 USP1 314653 sc-eQTL 9.11e-01 0.0103 0.0918 0.591 CD4_CTL L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 3.80e-01 -0.0805 0.0915 0.591 CD4_CTL L2
ENSG00000079739 PGM1 -842461 sc-eQTL 3.88e-01 0.0655 0.0758 0.598 CD4_Naive L2
ENSG00000088035 ALG6 -616625 sc-eQTL 7.80e-01 0.0231 0.0825 0.598 CD4_Naive L2
ENSG00000116641 DOCK7 62564 sc-eQTL 7.77e-01 -0.023 0.0811 0.598 CD4_Naive L2
ENSG00000125703 ATG4C -33182 sc-eQTL 8.26e-01 0.0158 0.0717 0.598 CD4_Naive L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 8.80e-01 -0.0133 0.0876 0.598 CD4_Naive L2
ENSG00000162607 USP1 314653 sc-eQTL 4.70e-01 0.0484 0.0668 0.598 CD4_Naive L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 1.68e-02 0.207 0.0858 0.598 CD4_Naive L2
ENSG00000079739 PGM1 -842461 sc-eQTL 8.34e-01 0.0166 0.0793 0.598 CD4_TCM L2
ENSG00000088035 ALG6 -616625 sc-eQTL 8.81e-02 -0.157 0.0915 0.598 CD4_TCM L2
ENSG00000116641 DOCK7 62564 sc-eQTL 9.08e-01 -0.00949 0.0816 0.598 CD4_TCM L2
ENSG00000125703 ATG4C -33182 sc-eQTL 5.54e-01 0.0471 0.0794 0.598 CD4_TCM L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 3.91e-01 0.0803 0.0935 0.598 CD4_TCM L2
ENSG00000162607 USP1 314653 sc-eQTL 8.53e-01 -0.0143 0.0768 0.598 CD4_TCM L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 4.23e-01 0.0727 0.0905 0.598 CD4_TCM L2
ENSG00000079739 PGM1 -842461 sc-eQTL 6.96e-01 0.0365 0.0934 0.598 CD4_TEM L2
ENSG00000088035 ALG6 -616625 sc-eQTL 2.46e-01 -0.109 0.0936 0.598 CD4_TEM L2
ENSG00000116641 DOCK7 62564 sc-eQTL 9.69e-01 0.00357 0.0915 0.598 CD4_TEM L2
ENSG00000125703 ATG4C -33182 sc-eQTL 5.64e-01 0.0513 0.0888 0.598 CD4_TEM L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 6.40e-01 0.043 0.0917 0.598 CD4_TEM L2
ENSG00000162607 USP1 314653 sc-eQTL 7.19e-01 0.0314 0.0869 0.598 CD4_TEM L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 2.54e-01 -0.109 0.0948 0.598 CD4_TEM L2
ENSG00000079739 PGM1 -842461 sc-eQTL 1.51e-01 0.122 0.085 0.598 CD8_CTL L2
ENSG00000088035 ALG6 -616625 sc-eQTL 3.76e-01 -0.0805 0.0906 0.598 CD8_CTL L2
ENSG00000116641 DOCK7 62564 sc-eQTL 2.56e-01 0.0978 0.0859 0.598 CD8_CTL L2
ENSG00000125703 ATG4C -33182 sc-eQTL 2.13e-02 0.21 0.0906 0.598 CD8_CTL L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.86e-01 -0.00165 0.0954 0.598 CD8_CTL L2
ENSG00000162607 USP1 314653 sc-eQTL 8.37e-01 0.0175 0.0854 0.598 CD8_CTL L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 3.18e-01 0.0975 0.0975 0.598 CD8_CTL L2
ENSG00000079739 PGM1 -842461 sc-eQTL 7.68e-01 0.0257 0.087 0.598 CD8_Naive L2
ENSG00000088035 ALG6 -616625 sc-eQTL 4.48e-01 -0.0683 0.0899 0.598 CD8_Naive L2
ENSG00000116641 DOCK7 62564 sc-eQTL 2.14e-02 -0.213 0.0919 0.598 CD8_Naive L2
ENSG00000125703 ATG4C -33182 sc-eQTL 1.82e-01 0.119 0.089 0.598 CD8_Naive L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 5.57e-01 0.0532 0.0904 0.598 CD8_Naive L2
ENSG00000162607 USP1 314653 sc-eQTL 8.14e-01 0.0181 0.0765 0.598 CD8_Naive L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 6.96e-01 0.0334 0.0853 0.598 CD8_Naive L2
ENSG00000079739 PGM1 -842461 sc-eQTL 3.50e-03 -0.28 0.0949 0.595 CD8_TCM L2
ENSG00000088035 ALG6 -616625 sc-eQTL 1.48e-01 0.142 0.0977 0.595 CD8_TCM L2
ENSG00000116641 DOCK7 62564 sc-eQTL 8.63e-01 0.0166 0.0958 0.595 CD8_TCM L2
ENSG00000125703 ATG4C -33182 sc-eQTL 8.17e-01 -0.0227 0.098 0.595 CD8_TCM L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 3.23e-01 0.0941 0.095 0.595 CD8_TCM L2
ENSG00000162607 USP1 314653 sc-eQTL 9.70e-01 0.00341 0.0916 0.595 CD8_TCM L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 8.51e-03 0.253 0.0953 0.595 CD8_TCM L2
ENSG00000079739 PGM1 -842461 sc-eQTL 4.52e-01 0.0751 0.0996 0.603 CD8_TEM L2
ENSG00000088035 ALG6 -616625 sc-eQTL 6.25e-02 0.186 0.0993 0.603 CD8_TEM L2
ENSG00000116641 DOCK7 62564 sc-eQTL 9.48e-01 0.00637 0.0971 0.603 CD8_TEM L2
ENSG00000125703 ATG4C -33182 sc-eQTL 4.87e-02 0.183 0.0924 0.603 CD8_TEM L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 5.61e-01 0.0588 0.101 0.603 CD8_TEM L2
ENSG00000162607 USP1 314653 sc-eQTL 3.67e-01 -0.087 0.0962 0.603 CD8_TEM L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 9.13e-01 0.0107 0.098 0.603 CD8_TEM L2
ENSG00000079739 PGM1 -842461 sc-eQTL 7.93e-02 -0.159 0.0903 0.595 MAIT L2
ENSG00000088035 ALG6 -616625 sc-eQTL 9.57e-01 0.00481 0.09 0.595 MAIT L2
ENSG00000116641 DOCK7 62564 sc-eQTL 9.16e-01 -0.00912 0.0862 0.595 MAIT L2
ENSG00000125703 ATG4C -33182 sc-eQTL 2.30e-02 0.206 0.0898 0.595 MAIT L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 8.85e-01 -0.0131 0.0911 0.595 MAIT L2
ENSG00000162607 USP1 314653 sc-eQTL 2.87e-01 0.0962 0.0902 0.595 MAIT L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 2.99e-01 0.0974 0.0936 0.595 MAIT L2
ENSG00000079739 PGM1 -842461 sc-eQTL 6.69e-01 -0.0397 0.0927 0.596 NK_CD56bright L2
ENSG00000088035 ALG6 -616625 sc-eQTL 9.17e-01 -0.00993 0.0951 0.596 NK_CD56bright L2
ENSG00000116641 DOCK7 62564 sc-eQTL 1.53e-01 -0.118 0.082 0.596 NK_CD56bright L2
ENSG00000125703 ATG4C -33182 sc-eQTL 2.48e-01 -0.106 0.0918 0.596 NK_CD56bright L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 7.76e-01 -0.0274 0.0958 0.596 NK_CD56bright L2
ENSG00000162607 USP1 314653 sc-eQTL 5.04e-01 0.066 0.0987 0.596 NK_CD56bright L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 1.43e-01 -0.138 0.0941 0.596 NK_CD56bright L2
ENSG00000079739 PGM1 -842461 sc-eQTL 3.46e-01 -0.0692 0.0733 0.597 NK_CD56dim L2
ENSG00000088035 ALG6 -616625 sc-eQTL 5.79e-01 -0.0518 0.0932 0.597 NK_CD56dim L2
ENSG00000116641 DOCK7 62564 sc-eQTL 1.26e-01 0.124 0.0807 0.597 NK_CD56dim L2
ENSG00000125703 ATG4C -33182 sc-eQTL 4.03e-01 -0.069 0.0823 0.597 NK_CD56dim L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 8.27e-01 -0.0205 0.0938 0.597 NK_CD56dim L2
ENSG00000162607 USP1 314653 sc-eQTL 8.35e-01 -0.0189 0.0909 0.597 NK_CD56dim L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 9.93e-01 -0.000882 0.101 0.597 NK_CD56dim L2
ENSG00000079739 PGM1 -842461 sc-eQTL 2.47e-01 0.114 0.098 0.603 NK_HLA L2
ENSG00000088035 ALG6 -616625 sc-eQTL 4.23e-01 -0.0817 0.102 0.603 NK_HLA L2
ENSG00000116641 DOCK7 62564 sc-eQTL 5.56e-01 0.046 0.0779 0.603 NK_HLA L2
ENSG00000125703 ATG4C -33182 sc-eQTL 1.55e-01 0.129 0.0903 0.603 NK_HLA L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.66e-01 0.00411 0.0953 0.603 NK_HLA L2
ENSG00000162607 USP1 314653 sc-eQTL 9.70e-01 -0.00378 0.0997 0.603 NK_HLA L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 4.28e-01 0.072 0.0906 0.603 NK_HLA L2
ENSG00000079739 PGM1 -842461 sc-eQTL 2.32e-01 0.0949 0.0792 0.597 NK_cytokine L2
ENSG00000088035 ALG6 -616625 sc-eQTL 4.62e-02 0.178 0.089 0.597 NK_cytokine L2
ENSG00000116641 DOCK7 62564 sc-eQTL 1.63e-01 0.116 0.0828 0.597 NK_cytokine L2
ENSG00000125703 ATG4C -33182 sc-eQTL 5.34e-01 0.053 0.0851 0.597 NK_cytokine L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 8.55e-01 -0.0161 0.0882 0.597 NK_cytokine L2
ENSG00000162607 USP1 314653 sc-eQTL 5.55e-01 -0.0547 0.0926 0.597 NK_cytokine L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 2.90e-01 0.0994 0.0937 0.597 NK_cytokine L2
ENSG00000079739 PGM1 -842461 sc-eQTL 8.47e-01 0.0207 0.107 0.604 PB L2
ENSG00000088035 ALG6 -616625 sc-eQTL 7.64e-01 -0.0337 0.112 0.604 PB L2
ENSG00000116641 DOCK7 62564 sc-eQTL 8.58e-01 -0.0215 0.12 0.604 PB L2
ENSG00000125703 ATG4C -33182 sc-eQTL 3.17e-01 0.105 0.104 0.604 PB L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 7.09e-01 -0.0389 0.104 0.604 PB L2
ENSG00000162607 USP1 314653 sc-eQTL 7.67e-01 0.0308 0.104 0.604 PB L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 6.06e-01 0.0592 0.114 0.604 PB L2
ENSG00000079739 PGM1 -842461 sc-eQTL 8.23e-01 0.0191 0.0853 0.598 Pro_T L2
ENSG00000088035 ALG6 -616625 sc-eQTL 8.71e-01 0.0142 0.0868 0.598 Pro_T L2
ENSG00000116641 DOCK7 62564 sc-eQTL 2.48e-01 0.101 0.0868 0.598 Pro_T L2
ENSG00000125703 ATG4C -33182 sc-eQTL 5.69e-01 0.0434 0.0762 0.598 Pro_T L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 3.57e-02 -0.16 0.0757 0.598 Pro_T L2
ENSG00000162607 USP1 314653 sc-eQTL 8.01e-01 0.0133 0.0526 0.598 Pro_T L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 2.09e-01 0.112 0.0885 0.598 Pro_T L2
ENSG00000079739 PGM1 -842461 sc-eQTL 9.11e-01 -0.0101 0.0903 0.598 Treg L2
ENSG00000088035 ALG6 -616625 sc-eQTL 9.40e-01 -0.00732 0.0966 0.598 Treg L2
ENSG00000116641 DOCK7 62564 sc-eQTL 5.19e-01 0.0573 0.0886 0.598 Treg L2
ENSG00000125703 ATG4C -33182 sc-eQTL 7.61e-01 0.0276 0.0906 0.598 Treg L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 2.08e-01 0.119 0.0944 0.598 Treg L2
ENSG00000162607 USP1 314653 sc-eQTL 7.64e-01 -0.0275 0.0917 0.598 Treg L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 9.95e-01 0.000616 0.0907 0.598 Treg L2
ENSG00000079739 PGM1 -842461 sc-eQTL 3.84e-01 -0.0784 0.0898 0.593 cDC L2
ENSG00000088035 ALG6 -616625 sc-eQTL 4.17e-02 -0.185 0.0902 0.593 cDC L2
ENSG00000116641 DOCK7 62564 sc-eQTL 3.45e-01 0.0846 0.0893 0.593 cDC L2
ENSG00000125703 ATG4C -33182 sc-eQTL 4.74e-01 -0.0558 0.0776 0.593 cDC L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 6.17e-01 0.0494 0.0985 0.593 cDC L2
ENSG00000162607 USP1 314653 sc-eQTL 8.61e-01 0.0154 0.0877 0.593 cDC L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 9.32e-01 0.00681 0.0792 0.593 cDC L2
ENSG00000079739 PGM1 -842461 sc-eQTL 1.70e-01 0.115 0.0839 0.598 cMono_IL1B L2
ENSG00000088035 ALG6 -616625 sc-eQTL 5.71e-02 -0.16 0.0836 0.598 cMono_IL1B L2
ENSG00000116641 DOCK7 62564 sc-eQTL 4.80e-01 0.0629 0.0888 0.598 cMono_IL1B L2
ENSG00000125703 ATG4C -33182 sc-eQTL 4.08e-01 0.0518 0.0625 0.598 cMono_IL1B L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 4.34e-01 0.0693 0.0885 0.598 cMono_IL1B L2
ENSG00000162607 USP1 314653 sc-eQTL 9.23e-01 -0.00758 0.0782 0.598 cMono_IL1B L2
ENSG00000240563 L1TD1 556101 sc-eQTL 8.00e-01 -0.0199 0.0785 0.598 cMono_IL1B L2
ENSG00000079739 PGM1 -842461 sc-eQTL 4.22e-01 0.0748 0.093 0.598 cMono_S100A L2
ENSG00000088035 ALG6 -616625 sc-eQTL 1.42e-01 -0.139 0.094 0.598 cMono_S100A L2
ENSG00000116641 DOCK7 62564 sc-eQTL 4.26e-01 0.0697 0.0874 0.598 cMono_S100A L2
ENSG00000125703 ATG4C -33182 sc-eQTL 5.27e-01 0.0479 0.0757 0.598 cMono_S100A L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 3.80e-01 0.0751 0.0854 0.598 cMono_S100A L2
ENSG00000162607 USP1 314653 sc-eQTL 5.70e-01 -0.0501 0.088 0.598 cMono_S100A L2
ENSG00000240563 L1TD1 556101 sc-eQTL 5.61e-01 0.0427 0.0732 0.598 cMono_S100A L2
ENSG00000079739 PGM1 -842461 sc-eQTL 4.76e-01 -0.0755 0.106 0.594 gdT L2
ENSG00000088035 ALG6 -616625 sc-eQTL 3.70e-01 -0.101 0.112 0.594 gdT L2
ENSG00000116641 DOCK7 62564 sc-eQTL 3.94e-01 0.0943 0.11 0.594 gdT L2
ENSG00000125703 ATG4C -33182 sc-eQTL 2.93e-01 -0.111 0.105 0.594 gdT L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 2.78e-01 -0.122 0.112 0.594 gdT L2
ENSG00000162607 USP1 314653 sc-eQTL 2.36e-01 -0.126 0.106 0.594 gdT L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 9.92e-01 -0.00108 0.11 0.594 gdT L2
ENSG00000079739 PGM1 -842461 sc-eQTL 4.75e-01 0.0663 0.0926 0.6 intMono L2
ENSG00000088035 ALG6 -616625 sc-eQTL 4.67e-01 0.0628 0.0862 0.6 intMono L2
ENSG00000116641 DOCK7 62564 sc-eQTL 3.04e-01 0.0907 0.088 0.6 intMono L2
ENSG00000125703 ATG4C -33182 sc-eQTL 8.24e-01 -0.0188 0.0842 0.6 intMono L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 6.84e-01 0.0379 0.0927 0.6 intMono L2
ENSG00000162607 USP1 314653 sc-eQTL 4.35e-01 -0.0737 0.0942 0.6 intMono L2
ENSG00000240563 L1TD1 556101 sc-eQTL 2.02e-01 -0.0884 0.0691 0.6 intMono L2
ENSG00000079739 PGM1 -842461 sc-eQTL 9.06e-01 -0.0101 0.0853 0.602 ncMono L2
ENSG00000088035 ALG6 -616625 sc-eQTL 3.86e-01 0.0813 0.0936 0.602 ncMono L2
ENSG00000116641 DOCK7 62564 sc-eQTL 9.42e-01 -0.00668 0.0923 0.602 ncMono L2
ENSG00000125703 ATG4C -33182 sc-eQTL 3.14e-01 0.0867 0.086 0.602 ncMono L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 6.67e-01 0.0389 0.0901 0.602 ncMono L2
ENSG00000162607 USP1 314653 sc-eQTL 7.22e-01 -0.0328 0.0921 0.602 ncMono L2
ENSG00000240563 L1TD1 556101 sc-eQTL 2.72e-01 -0.0718 0.0651 0.602 ncMono L2
ENSG00000079739 PGM1 -842461 sc-eQTL 5.38e-01 -0.0624 0.101 0.596 pDC L2
ENSG00000088035 ALG6 -616625 sc-eQTL 6.88e-02 0.179 0.0976 0.596 pDC L2
ENSG00000116641 DOCK7 62564 sc-eQTL 6.16e-01 -0.0506 0.101 0.596 pDC L2
ENSG00000125703 ATG4C -33182 sc-eQTL 5.65e-01 0.0522 0.0903 0.596 pDC L2
ENSG00000142856 ITGB3BP -842771 sc-eQTL 1.13e-01 -0.16 0.101 0.596 pDC L2
ENSG00000162607 USP1 314653 sc-eQTL 2.31e-01 0.124 0.103 0.596 pDC L2
ENSG00000203965 EFCAB7 -772422 sc-eQTL 7.89e-01 -0.0241 0.0898 0.596 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -842461 sc-eQTL 7.40e-01 -0.0298 0.0898 0.598 B_Memory LOneK1K
ENSG00000088035 ALG6 -616625 sc-eQTL 1.80e-01 -0.133 0.0989 0.598 B_Memory LOneK1K
ENSG00000116641 DOCK7 62564 sc-eQTL 3.22e-01 0.0854 0.086 0.598 B_Memory LOneK1K
ENSG00000125703 ATG4C -33182 sc-eQTL 6.21e-01 -0.0345 0.0696 0.598 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -842771 sc-eQTL 3.94e-01 -0.0781 0.0914 0.598 B_Memory LOneK1K
ENSG00000162607 USP1 314653 sc-eQTL 2.40e-01 0.104 0.0886 0.598 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -772422 sc-eQTL 4.34e-01 -0.0746 0.0953 0.598 B_Memory LOneK1K
ENSG00000079739 PGM1 -842461 sc-eQTL 4.73e-01 0.0662 0.0921 0.598 B_Naive LOneK1K
ENSG00000088035 ALG6 -616625 sc-eQTL 8.51e-01 0.0178 0.0949 0.598 B_Naive LOneK1K
ENSG00000116641 DOCK7 62564 sc-eQTL 4.49e-01 -0.0671 0.0885 0.598 B_Naive LOneK1K
ENSG00000125703 ATG4C -33182 sc-eQTL 3.64e-02 0.141 0.0669 0.598 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -842771 sc-eQTL 6.12e-01 -0.0486 0.0956 0.598 B_Naive LOneK1K
ENSG00000162607 USP1 314653 sc-eQTL 5.86e-01 -0.0448 0.0821 0.598 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -772422 sc-eQTL 3.14e-01 -0.0968 0.0959 0.598 B_Naive LOneK1K
ENSG00000079739 PGM1 -842461 sc-eQTL 2.56e-01 0.0975 0.0856 0.598 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -616625 sc-eQTL 2.60e-02 -0.184 0.0822 0.598 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 62564 sc-eQTL 3.60e-01 0.0767 0.0836 0.598 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -33182 sc-eQTL 2.02e-01 0.0739 0.0577 0.598 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -842771 sc-eQTL 2.83e-01 0.092 0.0854 0.598 CD14_Mono LOneK1K
ENSG00000162607 USP1 314653 sc-eQTL 5.26e-01 -0.0465 0.0731 0.598 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 556101 sc-eQTL 8.13e-01 0.0188 0.0793 0.598 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -842461 sc-eQTL 4.37e-01 0.0636 0.0818 0.599 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -616625 sc-eQTL 2.37e-01 0.11 0.0927 0.599 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 62564 sc-eQTL 5.45e-01 0.0557 0.0919 0.599 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -33182 sc-eQTL 7.73e-01 0.0227 0.0784 0.599 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -842771 sc-eQTL 5.48e-01 0.0547 0.091 0.599 CD16_Mono LOneK1K
ENSG00000162607 USP1 314653 sc-eQTL 3.64e-01 -0.0778 0.0854 0.599 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 556101 sc-eQTL 3.92e-02 -0.12 0.0578 0.599 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -842461 sc-eQTL 4.84e-01 0.0504 0.0718 0.597 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -616625 sc-eQTL 8.10e-01 0.0207 0.0863 0.597 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 62564 sc-eQTL 2.10e-02 0.177 0.0763 0.597 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -33182 sc-eQTL 9.10e-01 -0.00875 0.0771 0.597 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -842771 sc-eQTL 9.92e-01 0.000972 0.0914 0.597 NK_CD56dim LOneK1K
ENSG00000162607 USP1 314653 sc-eQTL 3.38e-01 -0.0795 0.0828 0.597 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -772422 sc-eQTL 5.81e-01 0.0558 0.101 0.597 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 62582 eQTL 3.2e-12 0.157 0.0222 0.0 0.0 0.371
ENSG00000125703 ATG4C -33182 eQTL 2.43e-05 0.0728 0.0172 0.00361 0.00365 0.371
ENSG00000132855 ANGPTL3 153463 pQTL 0.000234 0.111 0.0302 0.0 0.0 0.38
ENSG00000142856 ITGB3BP -842771 eQTL 0.003 -0.0895 0.0301 0.0 0.0 0.371
ENSG00000162607 USP1 314653 eQTL 0.000253 0.0484 0.0132 0.0 0.0 0.371

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 62582 2.73e-05 2.56e-05 7.49e-06 1.35e-05 3.64e-06 1.05e-05 3.49e-05 3.03e-06 1.94e-05 8.35e-06 2.45e-05 1.08e-05 5.21e-05 8.78e-06 6.27e-06 1.2e-05 1.56e-05 1.64e-05 7.02e-06 5.36e-06 9.62e-06 2.16e-05 2.99e-05 8.48e-06 3.46e-05 6.09e-06 8e-06 7.77e-06 2.89e-05 1.83e-05 1.5e-05 1.61e-06 1.92e-06 6.29e-06 9.03e-06 4.91e-06 3.11e-06 2.85e-06 4.8e-06 4.03e-06 1.78e-06 4.38e-05 4e-06 2.71e-07 1.99e-06 3.51e-06 2.93e-06 1.52e-06 1.57e-06
ENSG00000125703 ATG4C -33182 4.93e-05 3.54e-05 9.9e-06 1.51e-05 5.58e-06 1.52e-05 4.7e-05 3.75e-06 2.47e-05 1.05e-05 3.38e-05 1.65e-05 6.36e-05 1.17e-05 8.74e-06 1.67e-05 2.1e-05 2.07e-05 8.54e-06 6.38e-06 1.26e-05 2.96e-05 3.81e-05 1.05e-05 4.56e-05 7.81e-06 1.09e-05 9.09e-06 3.76e-05 2.06e-05 2.13e-05 1.64e-06 2.42e-06 6.71e-06 1.04e-05 5.84e-06 3.46e-06 2.99e-06 5.45e-06 4.03e-06 1.78e-06 5.34e-05 4.68e-06 2.64e-07 2.27e-06 4.81e-06 3.74e-06 1.55e-06 1.46e-06
ENSG00000142856 ITGB3BP -842771 2.17e-06 2.71e-06 3.22e-07 1.99e-06 3.2e-07 8.2e-07 2.93e-06 3.31e-07 1.89e-06 5.9e-07 1.83e-06 1.34e-06 9.02e-06 1.24e-06 4.55e-07 1.06e-06 1.12e-06 1.54e-06 1.08e-06 1.13e-06 1.4e-06 2.17e-06 2.16e-06 8.39e-07 3.6e-06 1.08e-06 1.03e-06 1.07e-06 2.07e-06 1.99e-06 2e-06 6.31e-08 2.65e-07 1.59e-06 6.29e-07 8.31e-07 1.07e-06 3.37e-07 9.23e-07 5.21e-07 3.05e-07 3.37e-06 6.89e-07 4.22e-08 2.16e-07 3.26e-07 1.71e-07 8.49e-08 5.35e-08
ENSG00000162607 USP1 314653 5.63e-06 7.69e-06 1.49e-06 4.3e-06 1.43e-06 2.2e-06 1.09e-05 9.98e-07 6.53e-06 2.65e-06 6.99e-06 4.86e-06 2.33e-05 3.34e-06 2.13e-06 4.64e-06 3.69e-06 3.99e-06 2.19e-06 1.55e-06 4.48e-06 7.11e-06 5.84e-06 1.84e-06 1.12e-05 2.58e-06 2.32e-06 1.73e-06 7.04e-06 7.88e-06 4.57e-06 5.76e-07 5.47e-07 3.69e-06 1.99e-06 2.19e-06 1.85e-06 1.29e-06 2.06e-06 2.9e-06 9.48e-07 1.24e-05 2.15e-06 1.56e-07 6.1e-07 1.68e-06 9.89e-07 7.43e-07 1.56e-07