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Genes within 1Mb (chr1:62747351:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -846060 sc-eQTL 5.72e-01 0.0452 0.0797 0.6 B L1
ENSG00000088035 ALG6 -620224 sc-eQTL 6.37e-01 -0.039 0.0826 0.6 B L1
ENSG00000116641 DOCK7 58965 sc-eQTL 7.75e-01 -0.0236 0.0826 0.6 B L1
ENSG00000125703 ATG4C -36781 sc-eQTL 3.78e-01 0.0507 0.0573 0.6 B L1
ENSG00000142856 ITGB3BP -846370 sc-eQTL 2.53e-01 -0.104 0.0911 0.6 B L1
ENSG00000162607 USP1 311054 sc-eQTL 7.88e-01 0.0214 0.0793 0.6 B L1
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.67e-01 -0.129 0.0932 0.6 B L1
ENSG00000079739 PGM1 -846060 sc-eQTL 6.94e-01 0.0269 0.0682 0.6 CD4T L1
ENSG00000088035 ALG6 -620224 sc-eQTL 6.23e-01 -0.037 0.0753 0.6 CD4T L1
ENSG00000116641 DOCK7 58965 sc-eQTL 5.39e-01 0.0469 0.0762 0.6 CD4T L1
ENSG00000125703 ATG4C -36781 sc-eQTL 5.55e-01 0.0364 0.0615 0.6 CD4T L1
ENSG00000142856 ITGB3BP -846370 sc-eQTL 5.09e-01 0.0577 0.0873 0.6 CD4T L1
ENSG00000162607 USP1 311054 sc-eQTL 7.43e-01 0.0196 0.0597 0.6 CD4T L1
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.04e-01 0.127 0.078 0.6 CD4T L1
ENSG00000079739 PGM1 -846060 sc-eQTL 9.80e-01 -0.00186 0.0756 0.6 CD8T L1
ENSG00000088035 ALG6 -620224 sc-eQTL 6.14e-01 -0.0421 0.0833 0.6 CD8T L1
ENSG00000116641 DOCK7 58965 sc-eQTL 9.26e-01 -0.0079 0.0845 0.6 CD8T L1
ENSG00000125703 ATG4C -36781 sc-eQTL 4.29e-02 0.162 0.0795 0.6 CD8T L1
ENSG00000142856 ITGB3BP -846370 sc-eQTL 6.40e-01 0.042 0.0897 0.6 CD8T L1
ENSG00000162607 USP1 311054 sc-eQTL 7.11e-01 -0.0259 0.0699 0.6 CD8T L1
ENSG00000203965 EFCAB7 -776021 sc-eQTL 6.01e-01 0.0469 0.0894 0.6 CD8T L1
ENSG00000079739 PGM1 -846060 sc-eQTL 4.52e-01 -0.0637 0.0845 0.599 DC L1
ENSG00000088035 ALG6 -620224 sc-eQTL 8.14e-01 0.0206 0.0873 0.599 DC L1
ENSG00000116641 DOCK7 58965 sc-eQTL 8.33e-01 0.0189 0.0895 0.599 DC L1
ENSG00000125703 ATG4C -36781 sc-eQTL 7.24e-01 -0.0248 0.07 0.599 DC L1
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.62e-01 -0.017 0.0979 0.599 DC L1
ENSG00000162607 USP1 311054 sc-eQTL 7.40e-01 0.0284 0.0854 0.599 DC L1
ENSG00000203965 EFCAB7 -776021 sc-eQTL 4.19e-01 -0.0688 0.0851 0.599 DC L1
ENSG00000079739 PGM1 -846060 sc-eQTL 3.01e-01 0.085 0.0819 0.6 Mono L1
ENSG00000088035 ALG6 -620224 sc-eQTL 7.78e-02 -0.151 0.0851 0.6 Mono L1
ENSG00000116641 DOCK7 58965 sc-eQTL 1.97e-01 0.107 0.0826 0.6 Mono L1
ENSG00000125703 ATG4C -36781 sc-eQTL 1.77e-01 0.0756 0.0558 0.6 Mono L1
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.76e-01 0.0784 0.0884 0.6 Mono L1
ENSG00000162607 USP1 311054 sc-eQTL 5.64e-01 -0.042 0.0727 0.6 Mono L1
ENSG00000240563 L1TD1 552502 sc-eQTL 3.44e-01 -0.0642 0.0677 0.6 Mono L1
ENSG00000079739 PGM1 -846060 sc-eQTL 5.30e-01 0.0448 0.0713 0.601 NK L1
ENSG00000088035 ALG6 -620224 sc-eQTL 9.81e-01 -0.00201 0.0837 0.601 NK L1
ENSG00000116641 DOCK7 58965 sc-eQTL 7.65e-02 0.122 0.0684 0.601 NK L1
ENSG00000125703 ATG4C -36781 sc-eQTL 8.89e-01 -0.0103 0.074 0.601 NK L1
ENSG00000142856 ITGB3BP -846370 sc-eQTL 9.77e-01 0.00267 0.092 0.601 NK L1
ENSG00000162607 USP1 311054 sc-eQTL 6.52e-01 -0.0371 0.0822 0.601 NK L1
ENSG00000203965 EFCAB7 -776021 sc-eQTL 8.76e-01 -0.0156 0.0999 0.601 NK L1
ENSG00000079739 PGM1 -846060 sc-eQTL 3.41e-01 -0.0756 0.0792 0.6 Other_T L1
ENSG00000088035 ALG6 -620224 sc-eQTL 2.45e-01 0.0927 0.0795 0.6 Other_T L1
ENSG00000116641 DOCK7 58965 sc-eQTL 5.90e-01 0.0439 0.0814 0.6 Other_T L1
ENSG00000125703 ATG4C -36781 sc-eQTL 5.18e-03 0.196 0.0692 0.6 Other_T L1
ENSG00000142856 ITGB3BP -846370 sc-eQTL 2.59e-01 -0.0705 0.0623 0.6 Other_T L1
ENSG00000162607 USP1 311054 sc-eQTL 8.56e-01 -0.00985 0.0542 0.6 Other_T L1
ENSG00000203965 EFCAB7 -776021 sc-eQTL 2.91e-01 0.102 0.0962 0.6 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -846060 sc-eQTL 7.91e-01 -0.0293 0.11 0.599 B_Activated L2
ENSG00000088035 ALG6 -620224 sc-eQTL 5.42e-01 -0.0646 0.106 0.599 B_Activated L2
ENSG00000116641 DOCK7 58965 sc-eQTL 9.79e-01 -0.00265 0.0985 0.599 B_Activated L2
ENSG00000125703 ATG4C -36781 sc-eQTL 6.11e-01 -0.0528 0.104 0.599 B_Activated L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 4.89e-02 -0.199 0.1 0.599 B_Activated L2
ENSG00000162607 USP1 311054 sc-eQTL 9.33e-01 0.00929 0.11 0.599 B_Activated L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 7.52e-01 0.0303 0.0958 0.599 B_Activated L2
ENSG00000079739 PGM1 -846060 sc-eQTL 5.65e-01 -0.0562 0.0975 0.601 B_Intermediate L2
ENSG00000088035 ALG6 -620224 sc-eQTL 4.72e-01 -0.0713 0.099 0.601 B_Intermediate L2
ENSG00000116641 DOCK7 58965 sc-eQTL 6.35e-01 0.045 0.0947 0.601 B_Intermediate L2
ENSG00000125703 ATG4C -36781 sc-eQTL 5.77e-01 -0.0448 0.0801 0.601 B_Intermediate L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.50e-01 -0.0181 0.0955 0.601 B_Intermediate L2
ENSG00000162607 USP1 311054 sc-eQTL 6.90e-01 0.0381 0.0953 0.601 B_Intermediate L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.47e-01 -0.137 0.0941 0.601 B_Intermediate L2
ENSG00000079739 PGM1 -846060 sc-eQTL 8.93e-01 -0.0128 0.0952 0.599 B_Memory L2
ENSG00000088035 ALG6 -620224 sc-eQTL 6.02e-01 -0.0506 0.0967 0.599 B_Memory L2
ENSG00000116641 DOCK7 58965 sc-eQTL 5.95e-01 0.0483 0.0907 0.599 B_Memory L2
ENSG00000125703 ATG4C -36781 sc-eQTL 9.78e-01 -0.00233 0.0863 0.599 B_Memory L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 9.59e-01 0.00503 0.0987 0.599 B_Memory L2
ENSG00000162607 USP1 311054 sc-eQTL 3.71e-01 0.0892 0.0994 0.599 B_Memory L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 6.85e-01 0.0398 0.098 0.599 B_Memory L2
ENSG00000079739 PGM1 -846060 sc-eQTL 8.45e-01 0.0188 0.0956 0.6 B_Naive1 L2
ENSG00000088035 ALG6 -620224 sc-eQTL 5.67e-01 0.0551 0.0959 0.6 B_Naive1 L2
ENSG00000116641 DOCK7 58965 sc-eQTL 1.93e-01 -0.12 0.0916 0.6 B_Naive1 L2
ENSG00000125703 ATG4C -36781 sc-eQTL 4.01e-02 0.145 0.0702 0.6 B_Naive1 L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.74e-01 -0.0836 0.0938 0.6 B_Naive1 L2
ENSG00000162607 USP1 311054 sc-eQTL 2.78e-01 -0.0896 0.0824 0.6 B_Naive1 L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.88e-01 -0.132 0.0999 0.6 B_Naive1 L2
ENSG00000079739 PGM1 -846060 sc-eQTL 3.44e-01 0.0898 0.0947 0.601 B_Naive2 L2
ENSG00000088035 ALG6 -620224 sc-eQTL 2.86e-01 -0.106 0.0987 0.601 B_Naive2 L2
ENSG00000116641 DOCK7 58965 sc-eQTL 7.46e-01 0.0309 0.0951 0.601 B_Naive2 L2
ENSG00000125703 ATG4C -36781 sc-eQTL 9.48e-01 -0.00602 0.0916 0.601 B_Naive2 L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.74e-01 -0.0157 0.0993 0.601 B_Naive2 L2
ENSG00000162607 USP1 311054 sc-eQTL 8.00e-01 0.024 0.0945 0.601 B_Naive2 L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 7.05e-01 -0.0374 0.0988 0.601 B_Naive2 L2
ENSG00000079739 PGM1 -846060 sc-eQTL 4.60e-02 -0.189 0.0942 0.593 CD4_CTL L2
ENSG00000088035 ALG6 -620224 sc-eQTL 8.59e-01 0.0179 0.101 0.593 CD4_CTL L2
ENSG00000116641 DOCK7 58965 sc-eQTL 1.15e-01 0.138 0.0874 0.593 CD4_CTL L2
ENSG00000125703 ATG4C -36781 sc-eQTL 7.53e-01 0.0287 0.091 0.593 CD4_CTL L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 2.91e-02 0.211 0.0962 0.593 CD4_CTL L2
ENSG00000162607 USP1 311054 sc-eQTL 9.18e-01 0.00958 0.0926 0.593 CD4_CTL L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 3.92e-01 -0.0793 0.0923 0.593 CD4_CTL L2
ENSG00000079739 PGM1 -846060 sc-eQTL 3.84e-01 0.0666 0.0764 0.6 CD4_Naive L2
ENSG00000088035 ALG6 -620224 sc-eQTL 7.55e-01 0.0259 0.0831 0.6 CD4_Naive L2
ENSG00000116641 DOCK7 58965 sc-eQTL 8.11e-01 -0.0195 0.0817 0.6 CD4_Naive L2
ENSG00000125703 ATG4C -36781 sc-eQTL 9.04e-01 0.00873 0.0722 0.6 CD4_Naive L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.36e-01 -0.0183 0.0882 0.6 CD4_Naive L2
ENSG00000162607 USP1 311054 sc-eQTL 4.41e-01 0.052 0.0673 0.6 CD4_Naive L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.54e-02 0.211 0.0864 0.6 CD4_Naive L2
ENSG00000079739 PGM1 -846060 sc-eQTL 8.04e-01 0.0198 0.0799 0.6 CD4_TCM L2
ENSG00000088035 ALG6 -620224 sc-eQTL 8.63e-02 -0.159 0.0922 0.6 CD4_TCM L2
ENSG00000116641 DOCK7 58965 sc-eQTL 9.25e-01 -0.00772 0.0822 0.6 CD4_TCM L2
ENSG00000125703 ATG4C -36781 sc-eQTL 5.70e-01 0.0455 0.08 0.6 CD4_TCM L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.92e-01 0.0808 0.0942 0.6 CD4_TCM L2
ENSG00000162607 USP1 311054 sc-eQTL 8.69e-01 -0.0128 0.0774 0.6 CD4_TCM L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 4.30e-01 0.0722 0.0912 0.6 CD4_TCM L2
ENSG00000079739 PGM1 -846060 sc-eQTL 7.08e-01 0.0352 0.094 0.6 CD4_TEM L2
ENSG00000088035 ALG6 -620224 sc-eQTL 2.76e-01 -0.103 0.0943 0.6 CD4_TEM L2
ENSG00000116641 DOCK7 58965 sc-eQTL 9.59e-01 0.00478 0.0922 0.6 CD4_TEM L2
ENSG00000125703 ATG4C -36781 sc-eQTL 4.61e-01 0.066 0.0894 0.6 CD4_TEM L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 6.90e-01 0.0368 0.0924 0.6 CD4_TEM L2
ENSG00000162607 USP1 311054 sc-eQTL 6.79e-01 0.0363 0.0875 0.6 CD4_TEM L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 2.27e-01 -0.116 0.0954 0.6 CD4_TEM L2
ENSG00000079739 PGM1 -846060 sc-eQTL 1.56e-01 0.122 0.0856 0.6 CD8_CTL L2
ENSG00000088035 ALG6 -620224 sc-eQTL 3.80e-01 -0.0803 0.0913 0.6 CD8_CTL L2
ENSG00000116641 DOCK7 58965 sc-eQTL 2.39e-01 0.102 0.0865 0.6 CD8_CTL L2
ENSG00000125703 ATG4C -36781 sc-eQTL 2.85e-02 0.201 0.0913 0.6 CD8_CTL L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 9.27e-01 -0.00886 0.096 0.6 CD8_CTL L2
ENSG00000162607 USP1 311054 sc-eQTL 7.87e-01 0.0233 0.086 0.6 CD8_CTL L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 3.28e-01 0.0963 0.0982 0.6 CD8_CTL L2
ENSG00000079739 PGM1 -846060 sc-eQTL 8.81e-01 0.0131 0.0876 0.6 CD8_Naive L2
ENSG00000088035 ALG6 -620224 sc-eQTL 4.63e-01 -0.0666 0.0906 0.6 CD8_Naive L2
ENSG00000116641 DOCK7 58965 sc-eQTL 3.19e-02 -0.2 0.0927 0.6 CD8_Naive L2
ENSG00000125703 ATG4C -36781 sc-eQTL 2.15e-01 0.111 0.0897 0.6 CD8_Naive L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 6.15e-01 0.0459 0.0911 0.6 CD8_Naive L2
ENSG00000162607 USP1 311054 sc-eQTL 9.12e-01 0.00852 0.077 0.6 CD8_Naive L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 5.59e-01 0.0502 0.0858 0.6 CD8_Naive L2
ENSG00000079739 PGM1 -846060 sc-eQTL 3.07e-03 -0.287 0.0956 0.597 CD8_TCM L2
ENSG00000088035 ALG6 -620224 sc-eQTL 1.54e-01 0.141 0.0985 0.597 CD8_TCM L2
ENSG00000116641 DOCK7 58965 sc-eQTL 7.85e-01 0.0264 0.0966 0.597 CD8_TCM L2
ENSG00000125703 ATG4C -36781 sc-eQTL 7.77e-01 -0.028 0.0988 0.597 CD8_TCM L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.17e-01 0.0961 0.0957 0.597 CD8_TCM L2
ENSG00000162607 USP1 311054 sc-eQTL 9.25e-01 0.00867 0.0924 0.597 CD8_TCM L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.01e-02 0.25 0.0962 0.597 CD8_TCM L2
ENSG00000079739 PGM1 -846060 sc-eQTL 5.18e-01 0.0651 0.1 0.605 CD8_TEM L2
ENSG00000088035 ALG6 -620224 sc-eQTL 6.34e-02 0.187 0.1 0.605 CD8_TEM L2
ENSG00000116641 DOCK7 58965 sc-eQTL 9.73e-01 0.00327 0.0979 0.605 CD8_TEM L2
ENSG00000125703 ATG4C -36781 sc-eQTL 6.72e-02 0.172 0.0933 0.605 CD8_TEM L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 5.20e-01 0.0655 0.102 0.605 CD8_TEM L2
ENSG00000162607 USP1 311054 sc-eQTL 3.25e-01 -0.0956 0.0969 0.605 CD8_TEM L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 9.74e-01 0.00316 0.0988 0.605 CD8_TEM L2
ENSG00000079739 PGM1 -846060 sc-eQTL 1.13e-01 -0.145 0.091 0.597 MAIT L2
ENSG00000088035 ALG6 -620224 sc-eQTL 8.82e-01 0.0135 0.0907 0.597 MAIT L2
ENSG00000116641 DOCK7 58965 sc-eQTL 9.44e-01 0.00607 0.0869 0.597 MAIT L2
ENSG00000125703 ATG4C -36781 sc-eQTL 3.07e-02 0.197 0.0906 0.597 MAIT L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.31e-01 -0.0196 0.0918 0.597 MAIT L2
ENSG00000162607 USP1 311054 sc-eQTL 3.83e-01 0.0794 0.0909 0.597 MAIT L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 2.62e-01 0.106 0.0942 0.597 MAIT L2
ENSG00000079739 PGM1 -846060 sc-eQTL 7.69e-01 -0.0275 0.0934 0.598 NK_CD56bright L2
ENSG00000088035 ALG6 -620224 sc-eQTL 8.21e-01 -0.0218 0.0958 0.598 NK_CD56bright L2
ENSG00000116641 DOCK7 58965 sc-eQTL 1.24e-01 -0.128 0.0825 0.598 NK_CD56bright L2
ENSG00000125703 ATG4C -36781 sc-eQTL 2.41e-01 -0.109 0.0924 0.598 NK_CD56bright L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 7.21e-01 -0.0345 0.0965 0.598 NK_CD56bright L2
ENSG00000162607 USP1 311054 sc-eQTL 4.48e-01 0.0756 0.0994 0.598 NK_CD56bright L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.27e-01 -0.145 0.0947 0.598 NK_CD56bright L2
ENSG00000079739 PGM1 -846060 sc-eQTL 2.84e-01 -0.0795 0.074 0.599 NK_CD56dim L2
ENSG00000088035 ALG6 -620224 sc-eQTL 5.39e-01 -0.0578 0.094 0.599 NK_CD56dim L2
ENSG00000116641 DOCK7 58965 sc-eQTL 1.35e-01 0.122 0.0814 0.599 NK_CD56dim L2
ENSG00000125703 ATG4C -36781 sc-eQTL 4.47e-01 -0.0633 0.083 0.599 NK_CD56dim L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.31e-01 -0.0203 0.0946 0.599 NK_CD56dim L2
ENSG00000162607 USP1 311054 sc-eQTL 8.19e-01 -0.021 0.0918 0.599 NK_CD56dim L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 9.69e-01 0.00397 0.102 0.599 NK_CD56dim L2
ENSG00000079739 PGM1 -846060 sc-eQTL 2.68e-01 0.11 0.0989 0.605 NK_HLA L2
ENSG00000088035 ALG6 -620224 sc-eQTL 4.90e-01 -0.0711 0.103 0.605 NK_HLA L2
ENSG00000116641 DOCK7 58965 sc-eQTL 4.86e-01 0.0548 0.0786 0.605 NK_HLA L2
ENSG00000125703 ATG4C -36781 sc-eQTL 1.70e-01 0.125 0.091 0.605 NK_HLA L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.62e-01 0.0167 0.096 0.605 NK_HLA L2
ENSG00000162607 USP1 311054 sc-eQTL 9.75e-01 0.00321 0.101 0.605 NK_HLA L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 3.78e-01 0.0806 0.0913 0.605 NK_HLA L2
ENSG00000079739 PGM1 -846060 sc-eQTL 2.33e-01 0.0956 0.0799 0.599 NK_cytokine L2
ENSG00000088035 ALG6 -620224 sc-eQTL 5.41e-02 0.174 0.0898 0.599 NK_cytokine L2
ENSG00000116641 DOCK7 58965 sc-eQTL 1.62e-01 0.117 0.0835 0.599 NK_cytokine L2
ENSG00000125703 ATG4C -36781 sc-eQTL 6.09e-01 0.0439 0.0858 0.599 NK_cytokine L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 8.40e-01 -0.018 0.0889 0.599 NK_cytokine L2
ENSG00000162607 USP1 311054 sc-eQTL 5.66e-01 -0.0537 0.0934 0.599 NK_cytokine L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 3.07e-01 0.0967 0.0945 0.599 NK_cytokine L2
ENSG00000079739 PGM1 -846060 sc-eQTL 8.47e-01 0.0207 0.107 0.604 PB L2
ENSG00000088035 ALG6 -620224 sc-eQTL 7.64e-01 -0.0337 0.112 0.604 PB L2
ENSG00000116641 DOCK7 58965 sc-eQTL 8.58e-01 -0.0215 0.12 0.604 PB L2
ENSG00000125703 ATG4C -36781 sc-eQTL 3.17e-01 0.105 0.104 0.604 PB L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 7.09e-01 -0.0389 0.104 0.604 PB L2
ENSG00000162607 USP1 311054 sc-eQTL 7.67e-01 0.0308 0.104 0.604 PB L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 6.06e-01 0.0592 0.114 0.604 PB L2
ENSG00000079739 PGM1 -846060 sc-eQTL 9.11e-01 0.00964 0.086 0.6 Pro_T L2
ENSG00000088035 ALG6 -620224 sc-eQTL 7.58e-01 0.0269 0.0875 0.6 Pro_T L2
ENSG00000116641 DOCK7 58965 sc-eQTL 2.81e-01 0.0947 0.0876 0.6 Pro_T L2
ENSG00000125703 ATG4C -36781 sc-eQTL 6.54e-01 0.0345 0.0769 0.6 Pro_T L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.12e-02 -0.165 0.0763 0.6 Pro_T L2
ENSG00000162607 USP1 311054 sc-eQTL 7.11e-01 0.0197 0.053 0.6 Pro_T L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 1.62e-01 0.125 0.0892 0.6 Pro_T L2
ENSG00000079739 PGM1 -846060 sc-eQTL 9.23e-01 -0.00885 0.091 0.6 Treg L2
ENSG00000088035 ALG6 -620224 sc-eQTL 9.83e-01 -0.00202 0.0973 0.6 Treg L2
ENSG00000116641 DOCK7 58965 sc-eQTL 5.08e-01 0.0592 0.0892 0.6 Treg L2
ENSG00000125703 ATG4C -36781 sc-eQTL 7.48e-01 0.0294 0.0913 0.6 Treg L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 1.97e-01 0.123 0.0951 0.6 Treg L2
ENSG00000162607 USP1 311054 sc-eQTL 6.55e-01 -0.0413 0.0923 0.6 Treg L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 9.84e-01 -0.00178 0.0914 0.6 Treg L2
ENSG00000079739 PGM1 -846060 sc-eQTL 4.92e-01 -0.0624 0.0906 0.595 cDC L2
ENSG00000088035 ALG6 -620224 sc-eQTL 5.56e-02 -0.175 0.0911 0.595 cDC L2
ENSG00000116641 DOCK7 58965 sc-eQTL 3.58e-01 0.083 0.0901 0.595 cDC L2
ENSG00000125703 ATG4C -36781 sc-eQTL 4.80e-01 -0.0554 0.0783 0.595 cDC L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 6.88e-01 0.04 0.0993 0.595 cDC L2
ENSG00000162607 USP1 311054 sc-eQTL 7.70e-01 0.0259 0.0884 0.595 cDC L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 9.56e-01 0.00445 0.0798 0.595 cDC L2
ENSG00000079739 PGM1 -846060 sc-eQTL 1.91e-01 0.111 0.0845 0.6 cMono_IL1B L2
ENSG00000088035 ALG6 -620224 sc-eQTL 8.08e-02 -0.148 0.0843 0.6 cMono_IL1B L2
ENSG00000116641 DOCK7 58965 sc-eQTL 4.56e-01 0.0668 0.0894 0.6 cMono_IL1B L2
ENSG00000125703 ATG4C -36781 sc-eQTL 3.87e-01 0.0544 0.0629 0.6 cMono_IL1B L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.98e-01 0.0755 0.0891 0.6 cMono_IL1B L2
ENSG00000162607 USP1 311054 sc-eQTL 8.65e-01 -0.0134 0.0787 0.6 cMono_IL1B L2
ENSG00000240563 L1TD1 552502 sc-eQTL 7.47e-01 -0.0255 0.079 0.6 cMono_IL1B L2
ENSG00000079739 PGM1 -846060 sc-eQTL 4.34e-01 0.0734 0.0937 0.6 cMono_S100A L2
ENSG00000088035 ALG6 -620224 sc-eQTL 1.57e-01 -0.134 0.0946 0.6 cMono_S100A L2
ENSG00000116641 DOCK7 58965 sc-eQTL 4.36e-01 0.0687 0.088 0.6 cMono_S100A L2
ENSG00000125703 ATG4C -36781 sc-eQTL 4.71e-01 0.055 0.0762 0.6 cMono_S100A L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 2.92e-01 0.0907 0.0859 0.6 cMono_S100A L2
ENSG00000162607 USP1 311054 sc-eQTL 5.61e-01 -0.0516 0.0885 0.6 cMono_S100A L2
ENSG00000240563 L1TD1 552502 sc-eQTL 5.96e-01 0.0391 0.0737 0.6 cMono_S100A L2
ENSG00000079739 PGM1 -846060 sc-eQTL 4.18e-01 -0.0869 0.107 0.597 gdT L2
ENSG00000088035 ALG6 -620224 sc-eQTL 4.71e-01 -0.0825 0.114 0.597 gdT L2
ENSG00000116641 DOCK7 58965 sc-eQTL 4.87e-01 0.078 0.112 0.597 gdT L2
ENSG00000125703 ATG4C -36781 sc-eQTL 4.06e-01 -0.0892 0.107 0.597 gdT L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.78e-01 -0.1 0.113 0.597 gdT L2
ENSG00000162607 USP1 311054 sc-eQTL 2.00e-01 -0.138 0.107 0.597 gdT L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 8.48e-01 -0.0214 0.112 0.597 gdT L2
ENSG00000079739 PGM1 -846060 sc-eQTL 5.66e-01 0.0536 0.0933 0.602 intMono L2
ENSG00000088035 ALG6 -620224 sc-eQTL 4.89e-01 0.0602 0.0868 0.602 intMono L2
ENSG00000116641 DOCK7 58965 sc-eQTL 2.90e-01 0.0939 0.0885 0.602 intMono L2
ENSG00000125703 ATG4C -36781 sc-eQTL 8.02e-01 -0.0213 0.0847 0.602 intMono L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 7.62e-01 0.0284 0.0934 0.602 intMono L2
ENSG00000162607 USP1 311054 sc-eQTL 4.77e-01 -0.0676 0.0948 0.602 intMono L2
ENSG00000240563 L1TD1 552502 sc-eQTL 3.16e-01 -0.0701 0.0697 0.602 intMono L2
ENSG00000079739 PGM1 -846060 sc-eQTL 9.69e-01 -0.00334 0.086 0.604 ncMono L2
ENSG00000088035 ALG6 -620224 sc-eQTL 4.03e-01 0.079 0.0943 0.604 ncMono L2
ENSG00000116641 DOCK7 58965 sc-eQTL 9.40e-01 -0.00697 0.093 0.604 ncMono L2
ENSG00000125703 ATG4C -36781 sc-eQTL 2.87e-01 0.0925 0.0866 0.604 ncMono L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 5.17e-01 0.0589 0.0908 0.604 ncMono L2
ENSG00000162607 USP1 311054 sc-eQTL 8.04e-01 -0.0231 0.0928 0.604 ncMono L2
ENSG00000240563 L1TD1 552502 sc-eQTL 3.19e-01 -0.0656 0.0657 0.604 ncMono L2
ENSG00000079739 PGM1 -846060 sc-eQTL 4.77e-01 -0.073 0.102 0.599 pDC L2
ENSG00000088035 ALG6 -620224 sc-eQTL 5.52e-02 0.191 0.0988 0.599 pDC L2
ENSG00000116641 DOCK7 58965 sc-eQTL 6.18e-01 -0.0509 0.102 0.599 pDC L2
ENSG00000125703 ATG4C -36781 sc-eQTL 5.16e-01 0.0595 0.0915 0.599 pDC L2
ENSG00000142856 ITGB3BP -846370 sc-eQTL 7.76e-02 -0.181 0.102 0.599 pDC L2
ENSG00000162607 USP1 311054 sc-eQTL 2.59e-01 0.118 0.104 0.599 pDC L2
ENSG00000203965 EFCAB7 -776021 sc-eQTL 7.32e-01 -0.0312 0.091 0.599 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -846060 sc-eQTL 6.32e-01 -0.0434 0.0904 0.6 B_Memory LOneK1K
ENSG00000088035 ALG6 -620224 sc-eQTL 2.25e-01 -0.121 0.0997 0.6 B_Memory LOneK1K
ENSG00000116641 DOCK7 58965 sc-eQTL 2.44e-01 0.101 0.0866 0.6 B_Memory LOneK1K
ENSG00000125703 ATG4C -36781 sc-eQTL 6.01e-01 -0.0368 0.0702 0.6 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -846370 sc-eQTL 3.76e-01 -0.0817 0.0921 0.6 B_Memory LOneK1K
ENSG00000162607 USP1 311054 sc-eQTL 2.41e-01 0.105 0.0893 0.6 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -776021 sc-eQTL 4.62e-01 -0.0707 0.096 0.6 B_Memory LOneK1K
ENSG00000079739 PGM1 -846060 sc-eQTL 5.55e-01 0.0548 0.0927 0.6 B_Naive LOneK1K
ENSG00000088035 ALG6 -620224 sc-eQTL 8.72e-01 0.0154 0.0956 0.6 B_Naive LOneK1K
ENSG00000116641 DOCK7 58965 sc-eQTL 5.13e-01 -0.0584 0.0891 0.6 B_Naive LOneK1K
ENSG00000125703 ATG4C -36781 sc-eQTL 3.75e-02 0.141 0.0674 0.6 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -846370 sc-eQTL 4.34e-01 -0.0754 0.0961 0.6 B_Naive LOneK1K
ENSG00000162607 USP1 311054 sc-eQTL 5.41e-01 -0.0506 0.0826 0.6 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -776021 sc-eQTL 2.51e-01 -0.111 0.0965 0.6 B_Naive LOneK1K
ENSG00000079739 PGM1 -846060 sc-eQTL 2.84e-01 0.0925 0.0862 0.6 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -620224 sc-eQTL 3.91e-02 -0.172 0.0829 0.6 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 58965 sc-eQTL 3.46e-01 0.0795 0.0841 0.6 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -36781 sc-eQTL 1.82e-01 0.0777 0.058 0.6 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -846370 sc-eQTL 2.24e-01 0.105 0.0859 0.6 CD14_Mono LOneK1K
ENSG00000162607 USP1 311054 sc-eQTL 4.93e-01 -0.0506 0.0736 0.6 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 552502 sc-eQTL 8.88e-01 0.0113 0.0798 0.6 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -846060 sc-eQTL 4.55e-01 0.0617 0.0824 0.601 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -620224 sc-eQTL 2.56e-01 0.106 0.0934 0.601 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 58965 sc-eQTL 5.28e-01 0.0585 0.0926 0.601 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -36781 sc-eQTL 7.62e-01 0.024 0.079 0.601 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -846370 sc-eQTL 4.56e-01 0.0685 0.0916 0.601 CD16_Mono LOneK1K
ENSG00000162607 USP1 311054 sc-eQTL 4.24e-01 -0.069 0.0861 0.601 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 552502 sc-eQTL 5.73e-02 -0.111 0.0583 0.601 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -846060 sc-eQTL 5.47e-01 0.0437 0.0724 0.599 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -620224 sc-eQTL 8.46e-01 0.0169 0.0871 0.599 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 58965 sc-eQTL 2.07e-02 0.18 0.077 0.599 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -36781 sc-eQTL 8.56e-01 -0.0141 0.0779 0.599 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -846370 sc-eQTL 9.51e-01 0.00567 0.0923 0.599 NK_CD56dim LOneK1K
ENSG00000162607 USP1 311054 sc-eQTL 3.50e-01 -0.0783 0.0836 0.599 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -776021 sc-eQTL 5.42e-01 0.0621 0.102 0.599 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 58983 eQTL 3.22e-12 0.157 0.0223 0.0 0.0 0.371
ENSG00000125703 ATG4C -36781 eQTL 1.94e-05 0.0738 0.0172 0.00453 0.00443 0.371
ENSG00000132855 ANGPTL3 149864 pQTL 0.000228 0.112 0.0302 0.0 0.0 0.38
ENSG00000142856 ITGB3BP -846370 eQTL 0.00289 -0.0899 0.0301 0.0 0.0 0.371
ENSG00000162607 USP1 311054 eQTL 0.000276 0.0482 0.0132 0.0 0.0 0.371

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 58983 7.84e-06 9.74e-06 1.36e-06 5.14e-06 2.25e-06 4.22e-06 1.05e-05 1.8e-06 8.5e-06 5.06e-06 1.2e-05 5.16e-06 1.56e-05 3.72e-06 2.66e-06 6.48e-06 4.31e-06 6.33e-06 2.54e-06 2.93e-06 4.97e-06 8.99e-06 7.55e-06 3.29e-06 1.29e-05 3.1e-06 4.67e-06 3.81e-06 9.56e-06 9.15e-06 5.24e-06 8.14e-07 1.13e-06 2.99e-06 3.75e-06 2.66e-06 1.71e-06 1.97e-06 1.98e-06 9.56e-07 8.43e-07 1.27e-05 1.28e-06 1.44e-07 7.67e-07 1.63e-06 1.06e-06 6.96e-07 4.32e-07
ENSG00000125703 ATG4C -36781 1.04e-05 1.28e-05 2.47e-06 7.6e-06 2.32e-06 5.65e-06 1.61e-05 2.14e-06 1.12e-05 6.12e-06 1.6e-05 6.48e-06 2.38e-05 4.95e-06 4.19e-06 7.31e-06 6.79e-06 9.67e-06 3.61e-06 3.3e-06 6.62e-06 1.2e-05 1.17e-05 4.01e-06 2.06e-05 4.43e-06 6.74e-06 5.32e-06 1.43e-05 1.46e-05 7.97e-06 9.86e-07 1.43e-06 3.68e-06 5.48e-06 3.03e-06 1.79e-06 2.11e-06 2.22e-06 1.6e-06 1.04e-06 1.7e-05 1.66e-06 1.97e-07 8.86e-07 1.95e-06 1.75e-06 7.73e-07 5e-07
ENSG00000142856 ITGB3BP -846370 3.14e-07 1.59e-07 6.57e-08 2.26e-07 1.07e-07 8.89e-08 2.24e-07 5.82e-08 1.66e-07 9.35e-08 1.69e-07 1.31e-07 2.29e-07 8.15e-08 6.12e-08 9.01e-08 4.63e-08 1.8e-07 7.42e-08 6.16e-08 1.26e-07 1.65e-07 1.64e-07 3.68e-08 2.17e-07 1.31e-07 1.29e-07 1.36e-07 1.32e-07 1.24e-07 1.21e-07 4.93e-08 4.16e-08 9.8e-08 4.41e-08 3.3e-08 4.54e-08 7.51e-08 6.49e-08 6.55e-08 5.1e-08 1.6e-07 4.83e-08 1.07e-08 3.71e-08 6.53e-09 7.92e-08 2.2e-09 4.67e-08
ENSG00000162607 USP1 311054 1.28e-06 1.22e-06 2.45e-07 1.19e-06 3.36e-07 5.98e-07 1.48e-06 3.97e-07 1.4e-06 6.23e-07 1.95e-06 8.15e-07 2.51e-06 3.07e-07 5.04e-07 9.19e-07 9.41e-07 7.94e-07 7.2e-07 5.08e-07 8.02e-07 1.69e-06 9.73e-07 5.61e-07 2.23e-06 5.67e-07 9.36e-07 9.24e-07 1.49e-06 1.2e-06 7.64e-07 2.42e-07 2.8e-07 6.95e-07 5.49e-07 4.8e-07 7.24e-07 2.78e-07 4.97e-07 2.97e-07 2.83e-07 1.65e-06 1.24e-07 8.98e-08 3.24e-07 1.72e-07 2.22e-07 4.85e-08 1.71e-07