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Genes within 1Mb (chr1:62733601:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -859810 sc-eQTL 3.25e-01 0.0897 0.0908 0.771 B L1
ENSG00000088035 ALG6 -633974 sc-eQTL 9.66e-01 -0.00401 0.0943 0.771 B L1
ENSG00000116641 DOCK7 45215 sc-eQTL 3.16e-01 0.0944 0.0941 0.771 B L1
ENSG00000125703 ATG4C -50531 sc-eQTL 6.41e-01 -0.0306 0.0655 0.771 B L1
ENSG00000132849 PATJ 991195 sc-eQTL 2.63e-01 -0.0889 0.0793 0.771 B L1
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.44e-01 -0.0799 0.104 0.771 B L1
ENSG00000162607 USP1 297304 sc-eQTL 6.85e-01 0.0368 0.0905 0.771 B L1
ENSG00000203965 EFCAB7 -789771 sc-eQTL 8.62e-01 0.0186 0.107 0.771 B L1
ENSG00000079739 PGM1 -859810 sc-eQTL 8.34e-01 -0.0162 0.077 0.771 CD4T L1
ENSG00000088035 ALG6 -633974 sc-eQTL 8.05e-01 0.021 0.085 0.771 CD4T L1
ENSG00000116641 DOCK7 45215 sc-eQTL 9.04e-01 0.0104 0.0861 0.771 CD4T L1
ENSG00000125703 ATG4C -50531 sc-eQTL 6.13e-01 0.0352 0.0694 0.771 CD4T L1
ENSG00000132849 PATJ 991195 sc-eQTL 3.09e-01 0.0574 0.0563 0.771 CD4T L1
ENSG00000142856 ITGB3BP -860120 sc-eQTL 9.36e-01 -0.00797 0.0986 0.771 CD4T L1
ENSG00000162607 USP1 297304 sc-eQTL 3.88e-01 0.0583 0.0673 0.771 CD4T L1
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.59e-01 -0.0272 0.0885 0.771 CD4T L1
ENSG00000079739 PGM1 -859810 sc-eQTL 5.55e-01 -0.0511 0.0864 0.771 CD8T L1
ENSG00000088035 ALG6 -633974 sc-eQTL 7.19e-01 -0.0343 0.0953 0.771 CD8T L1
ENSG00000116641 DOCK7 45215 sc-eQTL 3.01e-01 0.0998 0.0963 0.771 CD8T L1
ENSG00000125703 ATG4C -50531 sc-eQTL 3.86e-03 0.263 0.0899 0.771 CD8T L1
ENSG00000132849 PATJ 991195 sc-eQTL 6.04e-01 0.029 0.0559 0.771 CD8T L1
ENSG00000142856 ITGB3BP -860120 sc-eQTL 9.71e-01 0.00374 0.103 0.771 CD8T L1
ENSG00000162607 USP1 297304 sc-eQTL 8.12e-01 0.019 0.0799 0.771 CD8T L1
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.44e-01 0.0334 0.102 0.771 CD8T L1
ENSG00000079739 PGM1 -859810 sc-eQTL 1.28e-01 -0.145 0.0951 0.773 DC L1
ENSG00000088035 ALG6 -633974 sc-eQTL 9.57e-01 -0.00528 0.0987 0.773 DC L1
ENSG00000116641 DOCK7 45215 sc-eQTL 3.48e-01 -0.0949 0.101 0.773 DC L1
ENSG00000125703 ATG4C -50531 sc-eQTL 3.73e-01 0.0705 0.079 0.773 DC L1
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.96e-01 0.0753 0.111 0.773 DC L1
ENSG00000162607 USP1 297304 sc-eQTL 1.53e-01 0.138 0.0961 0.773 DC L1
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.74e-01 0.0277 0.0963 0.773 DC L1
ENSG00000079739 PGM1 -859810 sc-eQTL 4.92e-01 -0.064 0.093 0.771 Mono L1
ENSG00000088035 ALG6 -633974 sc-eQTL 7.03e-03 -0.26 0.0955 0.771 Mono L1
ENSG00000116641 DOCK7 45215 sc-eQTL 2.19e-01 0.115 0.0936 0.771 Mono L1
ENSG00000125703 ATG4C -50531 sc-eQTL 3.66e-01 0.0574 0.0634 0.771 Mono L1
ENSG00000142856 ITGB3BP -860120 sc-eQTL 6.29e-01 -0.0485 0.1 0.771 Mono L1
ENSG00000162607 USP1 297304 sc-eQTL 9.08e-01 -0.00953 0.0824 0.771 Mono L1
ENSG00000240563 L1TD1 538752 sc-eQTL 2.53e-01 -0.0879 0.0767 0.771 Mono L1
ENSG00000079739 PGM1 -859810 sc-eQTL 7.69e-01 0.0233 0.079 0.773 NK L1
ENSG00000088035 ALG6 -633974 sc-eQTL 7.05e-01 0.0351 0.0926 0.773 NK L1
ENSG00000116641 DOCK7 45215 sc-eQTL 3.68e-01 0.0687 0.0762 0.773 NK L1
ENSG00000125703 ATG4C -50531 sc-eQTL 2.21e-01 0.1 0.0817 0.773 NK L1
ENSG00000132849 PATJ 991195 sc-eQTL 2.34e-01 -0.0957 0.0801 0.773 NK L1
ENSG00000142856 ITGB3BP -860120 sc-eQTL 8.45e-01 -0.02 0.102 0.773 NK L1
ENSG00000162607 USP1 297304 sc-eQTL 4.54e-01 0.0682 0.0909 0.773 NK L1
ENSG00000203965 EFCAB7 -789771 sc-eQTL 6.90e-01 0.0442 0.111 0.773 NK L1
ENSG00000079739 PGM1 -859810 sc-eQTL 8.09e-01 -0.0219 0.0904 0.771 Other_T L1
ENSG00000088035 ALG6 -633974 sc-eQTL 2.50e-01 0.104 0.0906 0.771 Other_T L1
ENSG00000116641 DOCK7 45215 sc-eQTL 7.88e-01 0.0249 0.0927 0.771 Other_T L1
ENSG00000125703 ATG4C -50531 sc-eQTL 1.65e-01 0.111 0.0799 0.771 Other_T L1
ENSG00000132849 PATJ 991195 sc-eQTL 2.25e-01 0.0907 0.0745 0.771 Other_T L1
ENSG00000142856 ITGB3BP -860120 sc-eQTL 5.50e-01 -0.0426 0.0712 0.771 Other_T L1
ENSG00000162607 USP1 297304 sc-eQTL 5.59e-01 0.0361 0.0617 0.771 Other_T L1
ENSG00000203965 EFCAB7 -789771 sc-eQTL 5.78e-01 0.0611 0.11 0.771 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -859810 sc-eQTL 3.56e-01 -0.114 0.123 0.776 B_Activated L2
ENSG00000088035 ALG6 -633974 sc-eQTL 8.17e-01 0.0274 0.118 0.776 B_Activated L2
ENSG00000116641 DOCK7 45215 sc-eQTL 7.86e-01 -0.0299 0.11 0.776 B_Activated L2
ENSG00000125703 ATG4C -50531 sc-eQTL 8.99e-01 0.0148 0.116 0.776 B_Activated L2
ENSG00000132849 PATJ 991195 sc-eQTL 1.84e-01 0.13 0.0977 0.776 B_Activated L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.13e-01 -0.0924 0.113 0.776 B_Activated L2
ENSG00000162607 USP1 297304 sc-eQTL 2.97e-01 0.128 0.122 0.776 B_Activated L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.00e-01 0.0412 0.107 0.776 B_Activated L2
ENSG00000079739 PGM1 -859810 sc-eQTL 4.26e-01 0.0867 0.109 0.77 B_Intermediate L2
ENSG00000088035 ALG6 -633974 sc-eQTL 3.40e-01 -0.106 0.11 0.77 B_Intermediate L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.90e-01 -0.057 0.106 0.77 B_Intermediate L2
ENSG00000125703 ATG4C -50531 sc-eQTL 9.18e-01 0.00917 0.0895 0.77 B_Intermediate L2
ENSG00000132849 PATJ 991195 sc-eQTL 5.78e-01 0.0539 0.0968 0.77 B_Intermediate L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 6.65e-01 -0.0463 0.107 0.77 B_Intermediate L2
ENSG00000162607 USP1 297304 sc-eQTL 1.28e-01 0.162 0.106 0.77 B_Intermediate L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 2.95e-01 -0.111 0.105 0.77 B_Intermediate L2
ENSG00000079739 PGM1 -859810 sc-eQTL 8.38e-01 -0.0218 0.106 0.772 B_Memory L2
ENSG00000088035 ALG6 -633974 sc-eQTL 2.90e-01 0.114 0.108 0.772 B_Memory L2
ENSG00000116641 DOCK7 45215 sc-eQTL 3.63e-01 0.0922 0.101 0.772 B_Memory L2
ENSG00000125703 ATG4C -50531 sc-eQTL 6.34e-01 0.0459 0.0962 0.772 B_Memory L2
ENSG00000132849 PATJ 991195 sc-eQTL 6.16e-02 -0.179 0.0953 0.772 B_Memory L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 3.19e-01 -0.11 0.11 0.772 B_Memory L2
ENSG00000162607 USP1 297304 sc-eQTL 1.86e-01 0.147 0.111 0.772 B_Memory L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 5.94e-01 0.0583 0.109 0.772 B_Memory L2
ENSG00000079739 PGM1 -859810 sc-eQTL 6.15e-01 0.0543 0.108 0.771 B_Naive1 L2
ENSG00000088035 ALG6 -633974 sc-eQTL 6.79e-01 -0.0449 0.108 0.771 B_Naive1 L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.28e-01 0.0655 0.104 0.771 B_Naive1 L2
ENSG00000125703 ATG4C -50531 sc-eQTL 7.97e-01 0.0206 0.0799 0.771 B_Naive1 L2
ENSG00000132849 PATJ 991195 sc-eQTL 8.71e-01 -0.0167 0.103 0.771 B_Naive1 L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 5.59e-01 -0.062 0.106 0.771 B_Naive1 L2
ENSG00000162607 USP1 297304 sc-eQTL 4.97e-01 -0.0634 0.0932 0.771 B_Naive1 L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 9.85e-01 0.00212 0.113 0.771 B_Naive1 L2
ENSG00000079739 PGM1 -859810 sc-eQTL 6.37e-01 0.0505 0.107 0.773 B_Naive2 L2
ENSG00000088035 ALG6 -633974 sc-eQTL 4.86e-01 -0.0775 0.111 0.773 B_Naive2 L2
ENSG00000116641 DOCK7 45215 sc-eQTL 4.68e-01 0.0777 0.107 0.773 B_Naive2 L2
ENSG00000125703 ATG4C -50531 sc-eQTL 6.35e-02 -0.191 0.102 0.773 B_Naive2 L2
ENSG00000132849 PATJ 991195 sc-eQTL 7.25e-01 -0.0371 0.105 0.773 B_Naive2 L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 5.63e-01 -0.0646 0.112 0.773 B_Naive2 L2
ENSG00000162607 USP1 297304 sc-eQTL 4.71e-01 -0.0767 0.106 0.773 B_Naive2 L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 5.04e-01 0.0744 0.111 0.773 B_Naive2 L2
ENSG00000079739 PGM1 -859810 sc-eQTL 9.31e-04 -0.35 0.104 0.766 CD4_CTL L2
ENSG00000088035 ALG6 -633974 sc-eQTL 1.15e-01 -0.178 0.112 0.766 CD4_CTL L2
ENSG00000116641 DOCK7 45215 sc-eQTL 2.53e-02 0.22 0.0977 0.766 CD4_CTL L2
ENSG00000125703 ATG4C -50531 sc-eQTL 1.86e-01 0.135 0.102 0.766 CD4_CTL L2
ENSG00000132849 PATJ 991195 sc-eQTL 1.34e-01 -0.123 0.0815 0.766 CD4_CTL L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 1.32e-01 0.165 0.109 0.766 CD4_CTL L2
ENSG00000162607 USP1 297304 sc-eQTL 5.84e-01 0.0571 0.104 0.766 CD4_CTL L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 2.81e-01 -0.112 0.104 0.766 CD4_CTL L2
ENSG00000079739 PGM1 -859810 sc-eQTL 7.40e-01 -0.0288 0.0864 0.771 CD4_Naive L2
ENSG00000088035 ALG6 -633974 sc-eQTL 6.95e-02 0.17 0.0932 0.771 CD4_Naive L2
ENSG00000116641 DOCK7 45215 sc-eQTL 2.42e-01 -0.108 0.092 0.771 CD4_Naive L2
ENSG00000125703 ATG4C -50531 sc-eQTL 4.82e-01 0.0574 0.0815 0.771 CD4_Naive L2
ENSG00000132849 PATJ 991195 sc-eQTL 4.58e-01 0.0425 0.0572 0.771 CD4_Naive L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.04e-01 -0.0831 0.0995 0.771 CD4_Naive L2
ENSG00000162607 USP1 297304 sc-eQTL 6.87e-01 0.0307 0.0761 0.771 CD4_Naive L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 6.55e-01 -0.0443 0.0989 0.771 CD4_Naive L2
ENSG00000079739 PGM1 -859810 sc-eQTL 8.79e-01 0.0137 0.0898 0.771 CD4_TCM L2
ENSG00000088035 ALG6 -633974 sc-eQTL 3.83e-02 -0.215 0.103 0.771 CD4_TCM L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.10e-01 0.061 0.0923 0.771 CD4_TCM L2
ENSG00000125703 ATG4C -50531 sc-eQTL 9.84e-01 0.00182 0.09 0.771 CD4_TCM L2
ENSG00000132849 PATJ 991195 sc-eQTL 3.31e-01 0.0702 0.0721 0.771 CD4_TCM L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 2.79e-01 0.115 0.106 0.771 CD4_TCM L2
ENSG00000162607 USP1 297304 sc-eQTL 5.98e-01 0.0459 0.0869 0.771 CD4_TCM L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 5.81e-01 0.0567 0.103 0.771 CD4_TCM L2
ENSG00000079739 PGM1 -859810 sc-eQTL 5.02e-01 0.0719 0.107 0.771 CD4_TEM L2
ENSG00000088035 ALG6 -633974 sc-eQTL 7.83e-01 -0.0297 0.108 0.771 CD4_TEM L2
ENSG00000116641 DOCK7 45215 sc-eQTL 9.27e-01 -0.00968 0.105 0.771 CD4_TEM L2
ENSG00000125703 ATG4C -50531 sc-eQTL 3.05e-01 -0.105 0.102 0.771 CD4_TEM L2
ENSG00000132849 PATJ 991195 sc-eQTL 5.75e-01 0.0534 0.095 0.771 CD4_TEM L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 9.41e-01 0.00774 0.105 0.771 CD4_TEM L2
ENSG00000162607 USP1 297304 sc-eQTL 8.75e-02 0.17 0.099 0.771 CD4_TEM L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.72e-01 -0.0316 0.109 0.771 CD4_TEM L2
ENSG00000079739 PGM1 -859810 sc-eQTL 5.19e-01 -0.063 0.0977 0.771 CD8_CTL L2
ENSG00000088035 ALG6 -633974 sc-eQTL 8.90e-01 0.0143 0.104 0.771 CD8_CTL L2
ENSG00000116641 DOCK7 45215 sc-eQTL 1.81e-01 0.132 0.0982 0.771 CD8_CTL L2
ENSG00000125703 ATG4C -50531 sc-eQTL 6.74e-04 0.353 0.102 0.771 CD8_CTL L2
ENSG00000132849 PATJ 991195 sc-eQTL 7.47e-01 0.0321 0.0994 0.771 CD8_CTL L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 6.37e-01 -0.0516 0.109 0.771 CD8_CTL L2
ENSG00000162607 USP1 297304 sc-eQTL 7.79e-01 0.0275 0.0978 0.771 CD8_CTL L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.42e-01 0.0369 0.112 0.771 CD8_CTL L2
ENSG00000079739 PGM1 -859810 sc-eQTL 8.91e-01 0.0137 0.0993 0.771 CD8_Naive L2
ENSG00000088035 ALG6 -633974 sc-eQTL 5.81e-01 -0.0568 0.103 0.771 CD8_Naive L2
ENSG00000116641 DOCK7 45215 sc-eQTL 7.79e-02 -0.187 0.105 0.771 CD8_Naive L2
ENSG00000125703 ATG4C -50531 sc-eQTL 1.03e-01 0.166 0.101 0.771 CD8_Naive L2
ENSG00000132849 PATJ 991195 sc-eQTL 7.22e-01 0.0277 0.078 0.771 CD8_Naive L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 8.75e-01 -0.0162 0.103 0.771 CD8_Naive L2
ENSG00000162607 USP1 297304 sc-eQTL 8.11e-01 0.0209 0.0873 0.771 CD8_Naive L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 5.24e-01 0.0621 0.0973 0.771 CD8_Naive L2
ENSG00000079739 PGM1 -859810 sc-eQTL 2.92e-01 -0.118 0.112 0.769 CD8_TCM L2
ENSG00000088035 ALG6 -633974 sc-eQTL 8.80e-01 0.0173 0.114 0.769 CD8_TCM L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.69e-01 0.0633 0.111 0.769 CD8_TCM L2
ENSG00000125703 ATG4C -50531 sc-eQTL 7.75e-01 -0.0325 0.114 0.769 CD8_TCM L2
ENSG00000132849 PATJ 991195 sc-eQTL 7.79e-01 -0.0294 0.105 0.769 CD8_TCM L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 6.36e-01 -0.0524 0.11 0.769 CD8_TCM L2
ENSG00000162607 USP1 297304 sc-eQTL 2.60e-01 0.12 0.106 0.769 CD8_TCM L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 9.62e-01 0.00535 0.113 0.769 CD8_TCM L2
ENSG00000079739 PGM1 -859810 sc-eQTL 6.81e-01 0.0477 0.116 0.779 CD8_TEM L2
ENSG00000088035 ALG6 -633974 sc-eQTL 1.13e-01 0.185 0.116 0.779 CD8_TEM L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.70e-01 -0.0643 0.113 0.779 CD8_TEM L2
ENSG00000125703 ATG4C -50531 sc-eQTL 8.14e-02 0.189 0.108 0.779 CD8_TEM L2
ENSG00000132849 PATJ 991195 sc-eQTL 8.46e-01 0.0214 0.11 0.779 CD8_TEM L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 1.56e-01 0.166 0.117 0.779 CD8_TEM L2
ENSG00000162607 USP1 297304 sc-eQTL 3.40e-01 -0.107 0.112 0.779 CD8_TEM L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 8.82e-01 -0.0169 0.114 0.779 CD8_TEM L2
ENSG00000079739 PGM1 -859810 sc-eQTL 6.95e-02 -0.19 0.104 0.771 MAIT L2
ENSG00000088035 ALG6 -633974 sc-eQTL 5.78e-01 0.0577 0.104 0.771 MAIT L2
ENSG00000116641 DOCK7 45215 sc-eQTL 6.67e-01 0.0427 0.0993 0.771 MAIT L2
ENSG00000125703 ATG4C -50531 sc-eQTL 6.66e-02 0.192 0.104 0.771 MAIT L2
ENSG00000132849 PATJ 991195 sc-eQTL 2.35e-01 0.105 0.0883 0.771 MAIT L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 5.66e-01 -0.0602 0.105 0.771 MAIT L2
ENSG00000162607 USP1 297304 sc-eQTL 1.88e-01 0.137 0.104 0.771 MAIT L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 3.81e-01 0.0948 0.108 0.771 MAIT L2
ENSG00000079739 PGM1 -859810 sc-eQTL 2.89e-01 -0.112 0.105 0.769 NK_CD56bright L2
ENSG00000088035 ALG6 -633974 sc-eQTL 3.76e-01 -0.0954 0.108 0.769 NK_CD56bright L2
ENSG00000116641 DOCK7 45215 sc-eQTL 4.80e-01 -0.0661 0.0933 0.769 NK_CD56bright L2
ENSG00000125703 ATG4C -50531 sc-eQTL 7.08e-01 0.0391 0.104 0.769 NK_CD56bright L2
ENSG00000132849 PATJ 991195 sc-eQTL 1.93e-01 -0.133 0.102 0.769 NK_CD56bright L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 8.49e-01 -0.0207 0.109 0.769 NK_CD56bright L2
ENSG00000162607 USP1 297304 sc-eQTL 5.81e-01 0.0619 0.112 0.769 NK_CD56bright L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 3.35e-01 -0.103 0.107 0.769 NK_CD56bright L2
ENSG00000079739 PGM1 -859810 sc-eQTL 5.26e-01 -0.0521 0.0821 0.772 NK_CD56dim L2
ENSG00000088035 ALG6 -633974 sc-eQTL 7.83e-01 0.0288 0.104 0.772 NK_CD56dim L2
ENSG00000116641 DOCK7 45215 sc-eQTL 4.73e-01 0.0651 0.0906 0.772 NK_CD56dim L2
ENSG00000125703 ATG4C -50531 sc-eQTL 9.60e-01 -0.00465 0.0921 0.772 NK_CD56dim L2
ENSG00000132849 PATJ 991195 sc-eQTL 1.16e-02 -0.251 0.0984 0.772 NK_CD56dim L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 7.63e-01 -0.0316 0.105 0.772 NK_CD56dim L2
ENSG00000162607 USP1 297304 sc-eQTL 1.11e-01 0.162 0.101 0.772 NK_CD56dim L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 4.02e-01 0.0949 0.113 0.772 NK_CD56dim L2
ENSG00000079739 PGM1 -859810 sc-eQTL 1.99e-01 0.142 0.11 0.765 NK_HLA L2
ENSG00000088035 ALG6 -633974 sc-eQTL 7.79e-01 -0.0323 0.115 0.765 NK_HLA L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.24e-01 0.056 0.0878 0.765 NK_HLA L2
ENSG00000125703 ATG4C -50531 sc-eQTL 2.03e-01 0.13 0.102 0.765 NK_HLA L2
ENSG00000132849 PATJ 991195 sc-eQTL 4.24e-01 -0.0759 0.0947 0.765 NK_HLA L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.34e-01 -0.084 0.107 0.765 NK_HLA L2
ENSG00000162607 USP1 297304 sc-eQTL 3.40e-01 0.107 0.112 0.765 NK_HLA L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 5.24e-01 0.0652 0.102 0.765 NK_HLA L2
ENSG00000079739 PGM1 -859810 sc-eQTL 6.71e-01 0.0382 0.09 0.772 NK_cytokine L2
ENSG00000088035 ALG6 -633974 sc-eQTL 7.04e-02 0.184 0.101 0.772 NK_cytokine L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.27e-02 0.182 0.0934 0.772 NK_cytokine L2
ENSG00000125703 ATG4C -50531 sc-eQTL 2.01e-01 0.123 0.096 0.772 NK_cytokine L2
ENSG00000132849 PATJ 991195 sc-eQTL 6.85e-02 0.185 0.101 0.772 NK_cytokine L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.65e-01 -0.0731 0.0997 0.772 NK_cytokine L2
ENSG00000162607 USP1 297304 sc-eQTL 3.45e-01 -0.0991 0.105 0.772 NK_cytokine L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 3.16e-01 0.107 0.106 0.772 NK_cytokine L2
ENSG00000079739 PGM1 -859810 sc-eQTL 6.04e-01 -0.0667 0.128 0.759 PB L2
ENSG00000088035 ALG6 -633974 sc-eQTL 3.84e-01 0.118 0.135 0.759 PB L2
ENSG00000116641 DOCK7 45215 sc-eQTL 8.06e-01 0.0354 0.144 0.759 PB L2
ENSG00000125703 ATG4C -50531 sc-eQTL 4.16e-01 -0.102 0.125 0.759 PB L2
ENSG00000132849 PATJ 991195 sc-eQTL 6.03e-01 -0.0681 0.131 0.759 PB L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 5.05e-01 0.0839 0.125 0.759 PB L2
ENSG00000162607 USP1 297304 sc-eQTL 3.10e-01 0.127 0.124 0.759 PB L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 9.42e-01 -0.0101 0.138 0.759 PB L2
ENSG00000079739 PGM1 -859810 sc-eQTL 5.24e-01 0.0629 0.0985 0.772 Pro_T L2
ENSG00000088035 ALG6 -633974 sc-eQTL 9.52e-01 0.00608 0.1 0.772 Pro_T L2
ENSG00000116641 DOCK7 45215 sc-eQTL 9.89e-02 0.166 0.1 0.772 Pro_T L2
ENSG00000125703 ATG4C -50531 sc-eQTL 9.60e-01 0.00442 0.0881 0.772 Pro_T L2
ENSG00000132849 PATJ 991195 sc-eQTL 9.58e-01 0.00511 0.0962 0.772 Pro_T L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.46e-01 -0.0674 0.0883 0.772 Pro_T L2
ENSG00000162607 USP1 297304 sc-eQTL 1.92e-01 0.0793 0.0605 0.772 Pro_T L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 6.60e-01 0.0453 0.103 0.772 Pro_T L2
ENSG00000079739 PGM1 -859810 sc-eQTL 9.55e-01 0.00578 0.103 0.771 Treg L2
ENSG00000088035 ALG6 -633974 sc-eQTL 4.13e-01 0.0905 0.11 0.771 Treg L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.51e-01 0.0606 0.101 0.771 Treg L2
ENSG00000125703 ATG4C -50531 sc-eQTL 5.79e-01 0.0576 0.104 0.771 Treg L2
ENSG00000132849 PATJ 991195 sc-eQTL 6.05e-01 -0.0498 0.0961 0.771 Treg L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 9.74e-01 0.00354 0.109 0.771 Treg L2
ENSG00000162607 USP1 297304 sc-eQTL 6.82e-01 -0.0431 0.105 0.771 Treg L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 9.58e-01 0.00548 0.104 0.771 Treg L2
ENSG00000079739 PGM1 -859810 sc-eQTL 3.98e-01 -0.0884 0.104 0.768 cDC L2
ENSG00000088035 ALG6 -633974 sc-eQTL 2.28e-01 -0.128 0.106 0.768 cDC L2
ENSG00000116641 DOCK7 45215 sc-eQTL 9.94e-01 -0.000794 0.104 0.768 cDC L2
ENSG00000125703 ATG4C -50531 sc-eQTL 4.15e-01 0.0737 0.0902 0.768 cDC L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 3.97e-01 0.0969 0.114 0.768 cDC L2
ENSG00000162607 USP1 297304 sc-eQTL 6.76e-01 0.0426 0.102 0.768 cDC L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.98e-01 0.0236 0.092 0.768 cDC L2
ENSG00000079739 PGM1 -859810 sc-eQTL 8.16e-01 -0.0224 0.0965 0.771 cMono_IL1B L2
ENSG00000088035 ALG6 -633974 sc-eQTL 7.74e-02 -0.17 0.0959 0.771 cMono_IL1B L2
ENSG00000116641 DOCK7 45215 sc-eQTL 1.27e-01 0.155 0.101 0.771 cMono_IL1B L2
ENSG00000125703 ATG4C -50531 sc-eQTL 3.53e-01 0.0665 0.0715 0.771 cMono_IL1B L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 9.26e-01 0.0094 0.101 0.771 cMono_IL1B L2
ENSG00000162607 USP1 297304 sc-eQTL 8.50e-01 0.0169 0.0895 0.771 cMono_IL1B L2
ENSG00000240563 L1TD1 538752 sc-eQTL 3.90e-01 -0.0773 0.0897 0.771 cMono_IL1B L2
ENSG00000079739 PGM1 -859810 sc-eQTL 5.51e-01 -0.0641 0.107 0.771 cMono_S100A L2
ENSG00000088035 ALG6 -633974 sc-eQTL 2.68e-03 -0.324 0.107 0.771 cMono_S100A L2
ENSG00000116641 DOCK7 45215 sc-eQTL 9.38e-01 0.00787 0.101 0.771 cMono_S100A L2
ENSG00000125703 ATG4C -50531 sc-eQTL 9.06e-01 -0.0103 0.0874 0.771 cMono_S100A L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.84e-01 -0.069 0.0985 0.771 cMono_S100A L2
ENSG00000162607 USP1 297304 sc-eQTL 3.76e-01 -0.0899 0.101 0.771 cMono_S100A L2
ENSG00000240563 L1TD1 538752 sc-eQTL 3.21e-01 0.0838 0.0843 0.771 cMono_S100A L2
ENSG00000079739 PGM1 -859810 sc-eQTL 2.45e-01 0.142 0.121 0.764 gdT L2
ENSG00000088035 ALG6 -633974 sc-eQTL 4.23e-01 -0.104 0.13 0.764 gdT L2
ENSG00000116641 DOCK7 45215 sc-eQTL 5.20e-01 -0.0822 0.127 0.764 gdT L2
ENSG00000125703 ATG4C -50531 sc-eQTL 1.97e-01 -0.157 0.121 0.764 gdT L2
ENSG00000132849 PATJ 991195 sc-eQTL 7.35e-01 0.0403 0.119 0.764 gdT L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 6.87e-01 -0.0522 0.129 0.764 gdT L2
ENSG00000162607 USP1 297304 sc-eQTL 3.57e-01 -0.113 0.122 0.764 gdT L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 6.49e-01 -0.0581 0.127 0.764 gdT L2
ENSG00000079739 PGM1 -859810 sc-eQTL 3.01e-01 0.112 0.108 0.773 intMono L2
ENSG00000088035 ALG6 -633974 sc-eQTL 1.88e-01 0.133 0.1 0.773 intMono L2
ENSG00000116641 DOCK7 45215 sc-eQTL 7.62e-01 -0.0311 0.103 0.773 intMono L2
ENSG00000125703 ATG4C -50531 sc-eQTL 1.30e-01 0.148 0.0976 0.773 intMono L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 7.72e-01 -0.0314 0.108 0.773 intMono L2
ENSG00000162607 USP1 297304 sc-eQTL 3.63e-01 -0.1 0.11 0.773 intMono L2
ENSG00000240563 L1TD1 538752 sc-eQTL 5.90e-01 0.0436 0.0809 0.773 intMono L2
ENSG00000079739 PGM1 -859810 sc-eQTL 6.72e-01 -0.0416 0.0981 0.774 ncMono L2
ENSG00000088035 ALG6 -633974 sc-eQTL 4.07e-01 0.0896 0.108 0.774 ncMono L2
ENSG00000116641 DOCK7 45215 sc-eQTL 2.78e-01 0.115 0.106 0.774 ncMono L2
ENSG00000125703 ATG4C -50531 sc-eQTL 7.87e-01 0.0269 0.0991 0.774 ncMono L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 6.65e-01 -0.045 0.104 0.774 ncMono L2
ENSG00000162607 USP1 297304 sc-eQTL 8.72e-01 0.0171 0.106 0.774 ncMono L2
ENSG00000240563 L1TD1 538752 sc-eQTL 1.98e-01 -0.0967 0.0748 0.774 ncMono L2
ENSG00000079739 PGM1 -859810 sc-eQTL 9.52e-01 -0.00717 0.119 0.766 pDC L2
ENSG00000088035 ALG6 -633974 sc-eQTL 2.76e-01 0.126 0.115 0.766 pDC L2
ENSG00000116641 DOCK7 45215 sc-eQTL 2.94e-01 -0.124 0.118 0.766 pDC L2
ENSG00000125703 ATG4C -50531 sc-eQTL 6.46e-01 0.0488 0.106 0.766 pDC L2
ENSG00000142856 ITGB3BP -860120 sc-eQTL 2.18e-01 -0.147 0.119 0.766 pDC L2
ENSG00000162607 USP1 297304 sc-eQTL 6.67e-02 0.222 0.12 0.766 pDC L2
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.10e-01 0.0392 0.105 0.766 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -859810 sc-eQTL 9.22e-01 0.00992 0.101 0.771 B_Memory LOneK1K
ENSG00000088035 ALG6 -633974 sc-eQTL 8.18e-01 -0.0257 0.111 0.771 B_Memory LOneK1K
ENSG00000116641 DOCK7 45215 sc-eQTL 6.61e-01 0.0425 0.0967 0.771 B_Memory LOneK1K
ENSG00000125703 ATG4C -50531 sc-eQTL 7.29e-01 0.0272 0.0782 0.771 B_Memory LOneK1K
ENSG00000132849 PATJ 991195 sc-eQTL 6.19e-01 -0.0431 0.0866 0.771 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -860120 sc-eQTL 1.14e-01 -0.162 0.102 0.771 B_Memory LOneK1K
ENSG00000162607 USP1 297304 sc-eQTL 2.45e-02 0.223 0.0986 0.771 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -789771 sc-eQTL 7.53e-01 -0.0337 0.107 0.771 B_Memory LOneK1K
ENSG00000079739 PGM1 -859810 sc-eQTL 3.31e-01 0.102 0.105 0.771 B_Naive LOneK1K
ENSG00000088035 ALG6 -633974 sc-eQTL 6.65e-01 -0.0468 0.108 0.771 B_Naive LOneK1K
ENSG00000116641 DOCK7 45215 sc-eQTL 5.20e-01 0.0649 0.101 0.771 B_Naive LOneK1K
ENSG00000125703 ATG4C -50531 sc-eQTL 6.09e-01 -0.0394 0.0769 0.771 B_Naive LOneK1K
ENSG00000132849 PATJ 991195 sc-eQTL 7.89e-01 -0.0246 0.092 0.771 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.87e-01 -0.0756 0.109 0.771 B_Naive LOneK1K
ENSG00000162607 USP1 297304 sc-eQTL 6.65e-01 -0.0405 0.0934 0.771 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -789771 sc-eQTL 4.94e-01 0.0748 0.109 0.771 B_Naive LOneK1K
ENSG00000079739 PGM1 -859810 sc-eQTL 4.20e-01 -0.0794 0.0983 0.771 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -633974 sc-eQTL 1.36e-03 -0.302 0.093 0.771 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 45215 sc-eQTL 2.72e-01 0.105 0.0957 0.771 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -50531 sc-eQTL 6.25e-01 0.0325 0.0663 0.771 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -860120 sc-eQTL 9.89e-01 -0.00134 0.0981 0.771 CD14_Mono LOneK1K
ENSG00000162607 USP1 297304 sc-eQTL 6.79e-01 -0.0347 0.0838 0.771 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 538752 sc-eQTL 7.97e-01 0.0235 0.0909 0.771 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -859810 sc-eQTL 8.05e-01 0.0235 0.0951 0.774 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -633974 sc-eQTL 3.21e-01 0.107 0.108 0.774 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 45215 sc-eQTL 5.27e-01 0.0677 0.107 0.774 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -50531 sc-eQTL 1.61e-01 0.128 0.0907 0.774 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -860120 sc-eQTL 4.89e-01 -0.0733 0.106 0.774 CD16_Mono LOneK1K
ENSG00000162607 USP1 297304 sc-eQTL 4.57e-01 -0.074 0.0993 0.774 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 538752 sc-eQTL 2.36e-01 -0.0804 0.0676 0.774 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -859810 sc-eQTL 7.21e-01 0.0287 0.0803 0.772 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -633974 sc-eQTL 3.36e-01 0.0927 0.0962 0.772 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 45215 sc-eQTL 2.10e-01 0.108 0.086 0.772 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -50531 sc-eQTL 2.94e-01 0.0905 0.086 0.772 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 991195 sc-eQTL 3.49e-01 -0.0871 0.0927 0.772 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -860120 sc-eQTL 9.38e-01 -0.00797 0.102 0.772 NK_CD56dim LOneK1K
ENSG00000162607 USP1 297304 sc-eQTL 5.83e-01 0.051 0.0927 0.772 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -789771 sc-eQTL 3.30e-01 0.11 0.113 0.772 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 45233 eQTL 1.3e-18 0.225 0.0251 0.0 0.0 0.216
ENSG00000125703 ATG4C -50531 eQTL 0.00057 0.0682 0.0197 0.0 0.0 0.216
ENSG00000132855 ANGPTL3 136114 pQTL 0.000729 0.117 0.0344 0.0 0.0 0.222
ENSG00000162607 USP1 297304 eQTL 2.01e-10 0.0957 0.0149 0.0 0.0 0.216

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 45233 1.86e-05 2.32e-05 4.04e-06 1.39e-05 3.26e-06 8.4e-06 2.58e-05 3.41e-06 2.01e-05 9.15e-06 2.29e-05 9.52e-06 3.92e-05 9.68e-06 5.31e-06 1.11e-05 1.11e-05 1.6e-05 5.69e-06 5.66e-06 8.88e-06 1.98e-05 1.95e-05 6.42e-06 3.11e-05 5.4e-06 8.18e-06 8.98e-06 1.98e-05 1.81e-05 1.34e-05 1.63e-06 1.96e-06 6.33e-06 9.41e-06 4.5e-06 2.82e-06 2.86e-06 4.24e-06 3.17e-06 1.63e-06 2.57e-05 2.68e-06 1.76e-07 1.83e-06 2.79e-06 3.07e-06 1.29e-06 1.01e-06
ENSG00000162607 USP1 297304 1.29e-06 1.84e-06 2.9e-07 1.62e-06 3.6e-07 6.12e-07 1.57e-06 3.98e-07 1.5e-06 4.11e-07 1.87e-06 6.43e-07 3.53e-06 4.13e-07 5.03e-07 8.19e-07 9.81e-07 6.8e-07 8.2e-07 1.11e-06 6.56e-07 1.36e-06 9.01e-07 6.31e-07 2.25e-06 5.38e-07 9.05e-07 8.46e-07 1.46e-06 1.3e-06 8.51e-07 3.78e-07 2.9e-07 1.16e-06 7.04e-07 6.24e-07 9.3e-07 3.37e-07 1.35e-06 3.46e-07 3.03e-07 1.8e-06 5.42e-07 5.67e-08 1.69e-07 1.24e-07 2.36e-07 5.92e-08 1.47e-07