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Genes within 1Mb (chr1:62731316:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -862095 sc-eQTL 3.87e-01 -0.109 0.126 0.893 B L1
ENSG00000088035 ALG6 -636259 sc-eQTL 5.99e-01 -0.0688 0.131 0.893 B L1
ENSG00000116641 DOCK7 42930 sc-eQTL 2.20e-01 -0.16 0.13 0.893 B L1
ENSG00000125703 ATG4C -52816 sc-eQTL 4.71e-01 0.0655 0.0907 0.893 B L1
ENSG00000132849 PATJ 988910 sc-eQTL 5.28e-01 0.0697 0.11 0.893 B L1
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.63e-01 -0.106 0.144 0.893 B L1
ENSG00000162607 USP1 295019 sc-eQTL 7.92e-01 0.0331 0.125 0.893 B L1
ENSG00000203965 EFCAB7 -792056 sc-eQTL 7.03e-01 0.0565 0.148 0.893 B L1
ENSG00000079739 PGM1 -862095 sc-eQTL 4.77e-01 -0.0767 0.108 0.893 CD4T L1
ENSG00000088035 ALG6 -636259 sc-eQTL 4.83e-01 0.0836 0.119 0.893 CD4T L1
ENSG00000116641 DOCK7 42930 sc-eQTL 4.05e-02 -0.246 0.119 0.893 CD4T L1
ENSG00000125703 ATG4C -52816 sc-eQTL 5.89e-01 0.0525 0.0972 0.893 CD4T L1
ENSG00000132849 PATJ 988910 sc-eQTL 1.77e-01 0.107 0.0786 0.893 CD4T L1
ENSG00000142856 ITGB3BP -862405 sc-eQTL 5.54e-01 -0.0818 0.138 0.893 CD4T L1
ENSG00000162607 USP1 295019 sc-eQTL 7.03e-01 0.0361 0.0944 0.893 CD4T L1
ENSG00000203965 EFCAB7 -792056 sc-eQTL 7.38e-01 -0.0415 0.124 0.893 CD4T L1
ENSG00000079739 PGM1 -862095 sc-eQTL 1.18e-01 -0.186 0.119 0.893 CD8T L1
ENSG00000088035 ALG6 -636259 sc-eQTL 5.58e-01 0.0772 0.131 0.893 CD8T L1
ENSG00000116641 DOCK7 42930 sc-eQTL 9.87e-01 0.00225 0.133 0.893 CD8T L1
ENSG00000125703 ATG4C -52816 sc-eQTL 3.53e-03 0.366 0.124 0.893 CD8T L1
ENSG00000132849 PATJ 988910 sc-eQTL 3.78e-01 0.0681 0.0771 0.893 CD8T L1
ENSG00000142856 ITGB3BP -862405 sc-eQTL 2.42e-01 -0.166 0.141 0.893 CD8T L1
ENSG00000162607 USP1 295019 sc-eQTL 1.88e-01 0.145 0.11 0.893 CD8T L1
ENSG00000203965 EFCAB7 -792056 sc-eQTL 4.28e-01 0.112 0.141 0.893 CD8T L1
ENSG00000079739 PGM1 -862095 sc-eQTL 1.90e-01 -0.175 0.133 0.892 DC L1
ENSG00000088035 ALG6 -636259 sc-eQTL 9.13e-01 0.0151 0.138 0.892 DC L1
ENSG00000116641 DOCK7 42930 sc-eQTL 5.84e-01 -0.0775 0.141 0.892 DC L1
ENSG00000125703 ATG4C -52816 sc-eQTL 4.42e-01 -0.0852 0.111 0.892 DC L1
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.96e-01 0.105 0.155 0.892 DC L1
ENSG00000162607 USP1 295019 sc-eQTL 6.68e-01 0.058 0.135 0.892 DC L1
ENSG00000203965 EFCAB7 -792056 sc-eQTL 7.37e-01 0.0452 0.135 0.892 DC L1
ENSG00000079739 PGM1 -862095 sc-eQTL 2.21e-01 -0.158 0.128 0.893 Mono L1
ENSG00000088035 ALG6 -636259 sc-eQTL 3.08e-02 -0.289 0.133 0.893 Mono L1
ENSG00000116641 DOCK7 42930 sc-eQTL 7.15e-01 0.0475 0.13 0.893 Mono L1
ENSG00000125703 ATG4C -52816 sc-eQTL 6.12e-01 0.0447 0.0879 0.893 Mono L1
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.20e-01 -0.112 0.139 0.893 Mono L1
ENSG00000162607 USP1 295019 sc-eQTL 8.36e-01 -0.0237 0.114 0.893 Mono L1
ENSG00000240563 L1TD1 536467 sc-eQTL 5.88e-01 -0.0578 0.106 0.893 Mono L1
ENSG00000079739 PGM1 -862095 sc-eQTL 9.48e-01 0.00727 0.111 0.893 NK L1
ENSG00000088035 ALG6 -636259 sc-eQTL 1.73e-01 0.177 0.13 0.893 NK L1
ENSG00000116641 DOCK7 42930 sc-eQTL 1.07e-01 -0.172 0.107 0.893 NK L1
ENSG00000125703 ATG4C -52816 sc-eQTL 4.34e-02 0.232 0.114 0.893 NK L1
ENSG00000132849 PATJ 988910 sc-eQTL 7.50e-01 -0.0359 0.113 0.893 NK L1
ENSG00000142856 ITGB3BP -862405 sc-eQTL 7.72e-02 -0.252 0.142 0.893 NK L1
ENSG00000162607 USP1 295019 sc-eQTL 6.81e-01 0.0526 0.128 0.893 NK L1
ENSG00000203965 EFCAB7 -792056 sc-eQTL 9.13e-01 0.017 0.155 0.893 NK L1
ENSG00000079739 PGM1 -862095 sc-eQTL 6.49e-02 -0.232 0.125 0.893 Other_T L1
ENSG00000088035 ALG6 -636259 sc-eQTL 4.11e-01 0.104 0.126 0.893 Other_T L1
ENSG00000116641 DOCK7 42930 sc-eQTL 8.41e-01 -0.026 0.129 0.893 Other_T L1
ENSG00000125703 ATG4C -52816 sc-eQTL 7.70e-01 0.0327 0.112 0.893 Other_T L1
ENSG00000132849 PATJ 988910 sc-eQTL 4.91e-01 0.0719 0.104 0.893 Other_T L1
ENSG00000142856 ITGB3BP -862405 sc-eQTL 1.18e-01 -0.155 0.0986 0.893 Other_T L1
ENSG00000162607 USP1 295019 sc-eQTL 7.76e-02 0.151 0.0853 0.893 Other_T L1
ENSG00000203965 EFCAB7 -792056 sc-eQTL 5.87e-01 -0.0831 0.153 0.893 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -862095 sc-eQTL 5.83e-01 -0.094 0.171 0.895 B_Activated L2
ENSG00000088035 ALG6 -636259 sc-eQTL 7.53e-01 0.0517 0.164 0.895 B_Activated L2
ENSG00000116641 DOCK7 42930 sc-eQTL 3.11e-01 -0.155 0.152 0.895 B_Activated L2
ENSG00000125703 ATG4C -52816 sc-eQTL 6.42e-01 0.0747 0.16 0.895 B_Activated L2
ENSG00000132849 PATJ 988910 sc-eQTL 6.12e-01 0.0694 0.136 0.895 B_Activated L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 7.07e-01 -0.059 0.157 0.895 B_Activated L2
ENSG00000162607 USP1 295019 sc-eQTL 8.99e-01 -0.0215 0.17 0.895 B_Activated L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 9.98e-01 0.000383 0.149 0.895 B_Activated L2
ENSG00000079739 PGM1 -862095 sc-eQTL 9.49e-01 0.00954 0.15 0.893 B_Intermediate L2
ENSG00000088035 ALG6 -636259 sc-eQTL 7.53e-02 -0.27 0.151 0.893 B_Intermediate L2
ENSG00000116641 DOCK7 42930 sc-eQTL 4.92e-03 -0.405 0.142 0.893 B_Intermediate L2
ENSG00000125703 ATG4C -52816 sc-eQTL 8.30e-01 0.0265 0.123 0.893 B_Intermediate L2
ENSG00000132849 PATJ 988910 sc-eQTL 1.15e-01 0.209 0.132 0.893 B_Intermediate L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.52e-01 -0.11 0.146 0.893 B_Intermediate L2
ENSG00000162607 USP1 295019 sc-eQTL 5.45e-01 0.0886 0.146 0.893 B_Intermediate L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 6.17e-01 0.0725 0.145 0.893 B_Intermediate L2
ENSG00000079739 PGM1 -862095 sc-eQTL 7.82e-01 -0.0403 0.145 0.892 B_Memory L2
ENSG00000088035 ALG6 -636259 sc-eQTL 8.84e-01 0.0215 0.148 0.892 B_Memory L2
ENSG00000116641 DOCK7 42930 sc-eQTL 2.81e-01 -0.149 0.138 0.892 B_Memory L2
ENSG00000125703 ATG4C -52816 sc-eQTL 5.28e-01 0.083 0.131 0.892 B_Memory L2
ENSG00000132849 PATJ 988910 sc-eQTL 7.85e-01 -0.0359 0.131 0.892 B_Memory L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 8.81e-01 0.0225 0.151 0.892 B_Memory L2
ENSG00000162607 USP1 295019 sc-eQTL 3.01e-01 0.157 0.151 0.892 B_Memory L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 2.11e-01 -0.187 0.149 0.892 B_Memory L2
ENSG00000079739 PGM1 -862095 sc-eQTL 2.12e-01 -0.186 0.149 0.893 B_Naive1 L2
ENSG00000088035 ALG6 -636259 sc-eQTL 3.24e-01 -0.148 0.15 0.893 B_Naive1 L2
ENSG00000116641 DOCK7 42930 sc-eQTL 7.81e-01 0.0401 0.144 0.893 B_Naive1 L2
ENSG00000125703 ATG4C -52816 sc-eQTL 7.12e-01 0.0408 0.111 0.893 B_Naive1 L2
ENSG00000132849 PATJ 988910 sc-eQTL 3.68e-01 0.128 0.142 0.893 B_Naive1 L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 7.67e-01 -0.0435 0.147 0.893 B_Naive1 L2
ENSG00000162607 USP1 295019 sc-eQTL 5.01e-01 -0.087 0.129 0.893 B_Naive1 L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 3.53e-01 0.146 0.156 0.893 B_Naive1 L2
ENSG00000079739 PGM1 -862095 sc-eQTL 1.67e-01 -0.202 0.145 0.893 B_Naive2 L2
ENSG00000088035 ALG6 -636259 sc-eQTL 8.88e-01 0.0214 0.152 0.893 B_Naive2 L2
ENSG00000116641 DOCK7 42930 sc-eQTL 4.87e-01 0.102 0.146 0.893 B_Naive2 L2
ENSG00000125703 ATG4C -52816 sc-eQTL 3.73e-01 -0.126 0.141 0.893 B_Naive2 L2
ENSG00000132849 PATJ 988910 sc-eQTL 9.47e-01 0.00959 0.144 0.893 B_Naive2 L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 9.63e-01 -0.00712 0.153 0.893 B_Naive2 L2
ENSG00000162607 USP1 295019 sc-eQTL 5.77e-01 -0.0811 0.145 0.893 B_Naive2 L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 7.29e-01 0.0528 0.152 0.893 B_Naive2 L2
ENSG00000079739 PGM1 -862095 sc-eQTL 6.02e-01 -0.0782 0.15 0.893 CD4_CTL L2
ENSG00000088035 ALG6 -636259 sc-eQTL 8.23e-01 -0.0356 0.159 0.893 CD4_CTL L2
ENSG00000116641 DOCK7 42930 sc-eQTL 1.96e-01 0.179 0.138 0.893 CD4_CTL L2
ENSG00000125703 ATG4C -52816 sc-eQTL 6.58e-02 0.263 0.142 0.893 CD4_CTL L2
ENSG00000132849 PATJ 988910 sc-eQTL 2.13e-01 -0.143 0.114 0.893 CD4_CTL L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 8.42e-01 0.0307 0.153 0.893 CD4_CTL L2
ENSG00000162607 USP1 295019 sc-eQTL 9.63e-01 0.00671 0.146 0.893 CD4_CTL L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 2.03e-01 -0.185 0.145 0.893 CD4_CTL L2
ENSG00000079739 PGM1 -862095 sc-eQTL 2.05e-01 -0.153 0.121 0.893 CD4_Naive L2
ENSG00000088035 ALG6 -636259 sc-eQTL 1.45e-02 0.32 0.13 0.893 CD4_Naive L2
ENSG00000116641 DOCK7 42930 sc-eQTL 2.39e-02 -0.291 0.128 0.893 CD4_Naive L2
ENSG00000125703 ATG4C -52816 sc-eQTL 8.75e-01 0.0181 0.114 0.893 CD4_Naive L2
ENSG00000132849 PATJ 988910 sc-eQTL 8.75e-02 0.137 0.0797 0.893 CD4_Naive L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 6.33e-01 -0.0668 0.14 0.893 CD4_Naive L2
ENSG00000162607 USP1 295019 sc-eQTL 7.65e-01 0.032 0.107 0.893 CD4_Naive L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 9.07e-01 -0.0162 0.139 0.893 CD4_Naive L2
ENSG00000079739 PGM1 -862095 sc-eQTL 5.58e-01 0.0738 0.126 0.893 CD4_TCM L2
ENSG00000088035 ALG6 -636259 sc-eQTL 3.72e-02 -0.304 0.145 0.893 CD4_TCM L2
ENSG00000116641 DOCK7 42930 sc-eQTL 9.53e-02 -0.216 0.129 0.893 CD4_TCM L2
ENSG00000125703 ATG4C -52816 sc-eQTL 5.11e-01 0.0829 0.126 0.893 CD4_TCM L2
ENSG00000132849 PATJ 988910 sc-eQTL 6.20e-01 0.0503 0.101 0.893 CD4_TCM L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 6.68e-01 -0.0639 0.149 0.893 CD4_TCM L2
ENSG00000162607 USP1 295019 sc-eQTL 8.13e-01 0.0289 0.122 0.893 CD4_TCM L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 7.07e-01 0.0542 0.144 0.893 CD4_TCM L2
ENSG00000079739 PGM1 -862095 sc-eQTL 9.03e-01 -0.0183 0.149 0.893 CD4_TEM L2
ENSG00000088035 ALG6 -636259 sc-eQTL 2.46e-01 -0.174 0.149 0.893 CD4_TEM L2
ENSG00000116641 DOCK7 42930 sc-eQTL 2.19e-01 -0.179 0.146 0.893 CD4_TEM L2
ENSG00000125703 ATG4C -52816 sc-eQTL 9.93e-01 0.00131 0.142 0.893 CD4_TEM L2
ENSG00000132849 PATJ 988910 sc-eQTL 2.36e-01 0.157 0.132 0.893 CD4_TEM L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 7.89e-01 -0.0392 0.146 0.893 CD4_TEM L2
ENSG00000162607 USP1 295019 sc-eQTL 4.56e-01 0.104 0.139 0.893 CD4_TEM L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 6.35e-01 0.0722 0.152 0.893 CD4_TEM L2
ENSG00000079739 PGM1 -862095 sc-eQTL 1.92e-01 -0.174 0.133 0.893 CD8_CTL L2
ENSG00000088035 ALG6 -636259 sc-eQTL 6.98e-01 -0.0553 0.142 0.893 CD8_CTL L2
ENSG00000116641 DOCK7 42930 sc-eQTL 8.10e-01 0.0325 0.135 0.893 CD8_CTL L2
ENSG00000125703 ATG4C -52816 sc-eQTL 3.45e-02 0.303 0.142 0.893 CD8_CTL L2
ENSG00000132849 PATJ 988910 sc-eQTL 6.09e-01 -0.0697 0.136 0.893 CD8_CTL L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 2.57e-01 -0.169 0.149 0.893 CD8_CTL L2
ENSG00000162607 USP1 295019 sc-eQTL 5.40e-01 0.0821 0.134 0.893 CD8_CTL L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 6.84e-01 0.0623 0.153 0.893 CD8_CTL L2
ENSG00000079739 PGM1 -862095 sc-eQTL 5.68e-01 0.0795 0.139 0.893 CD8_Naive L2
ENSG00000088035 ALG6 -636259 sc-eQTL 3.93e-01 0.123 0.144 0.893 CD8_Naive L2
ENSG00000116641 DOCK7 42930 sc-eQTL 3.71e-01 -0.133 0.149 0.893 CD8_Naive L2
ENSG00000125703 ATG4C -52816 sc-eQTL 6.05e-02 0.267 0.142 0.893 CD8_Naive L2
ENSG00000132849 PATJ 988910 sc-eQTL 5.96e-01 0.0579 0.109 0.893 CD8_Naive L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.91e-01 -0.0996 0.144 0.893 CD8_Naive L2
ENSG00000162607 USP1 295019 sc-eQTL 5.40e-01 0.075 0.122 0.893 CD8_Naive L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 7.57e-01 0.0422 0.136 0.893 CD8_Naive L2
ENSG00000079739 PGM1 -862095 sc-eQTL 2.00e-01 -0.195 0.152 0.894 CD8_TCM L2
ENSG00000088035 ALG6 -636259 sc-eQTL 7.81e-01 -0.043 0.154 0.894 CD8_TCM L2
ENSG00000116641 DOCK7 42930 sc-eQTL 6.45e-01 -0.0696 0.151 0.894 CD8_TCM L2
ENSG00000125703 ATG4C -52816 sc-eQTL 9.22e-01 0.0152 0.154 0.894 CD8_TCM L2
ENSG00000132849 PATJ 988910 sc-eQTL 9.35e-01 -0.0116 0.142 0.894 CD8_TCM L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.56e-02 -0.298 0.148 0.894 CD8_TCM L2
ENSG00000162607 USP1 295019 sc-eQTL 8.08e-02 0.251 0.143 0.894 CD8_TCM L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 1.72e-01 0.208 0.152 0.894 CD8_TCM L2
ENSG00000079739 PGM1 -862095 sc-eQTL 5.85e-01 0.0851 0.156 0.9 CD8_TEM L2
ENSG00000088035 ALG6 -636259 sc-eQTL 3.12e-01 0.158 0.156 0.9 CD8_TEM L2
ENSG00000116641 DOCK7 42930 sc-eQTL 6.76e-01 0.0635 0.152 0.9 CD8_TEM L2
ENSG00000125703 ATG4C -52816 sc-eQTL 1.80e-01 0.195 0.145 0.9 CD8_TEM L2
ENSG00000132849 PATJ 988910 sc-eQTL 3.73e-01 0.132 0.147 0.9 CD8_TEM L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 3.17e-01 0.158 0.157 0.9 CD8_TEM L2
ENSG00000162607 USP1 295019 sc-eQTL 5.70e-01 -0.0856 0.15 0.9 CD8_TEM L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 4.76e-01 -0.109 0.153 0.9 CD8_TEM L2
ENSG00000079739 PGM1 -862095 sc-eQTL 6.95e-03 -0.397 0.145 0.894 MAIT L2
ENSG00000088035 ALG6 -636259 sc-eQTL 3.49e-01 0.137 0.146 0.894 MAIT L2
ENSG00000116641 DOCK7 42930 sc-eQTL 6.84e-01 0.0572 0.14 0.894 MAIT L2
ENSG00000125703 ATG4C -52816 sc-eQTL 7.59e-01 0.0455 0.148 0.894 MAIT L2
ENSG00000132849 PATJ 988910 sc-eQTL 1.76e-01 0.169 0.125 0.894 MAIT L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 2.18e-01 -0.183 0.148 0.894 MAIT L2
ENSG00000162607 USP1 295019 sc-eQTL 9.34e-01 -0.0121 0.147 0.894 MAIT L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 3.67e-01 -0.138 0.152 0.894 MAIT L2
ENSG00000079739 PGM1 -862095 sc-eQTL 5.10e-01 -0.096 0.145 0.893 NK_CD56bright L2
ENSG00000088035 ALG6 -636259 sc-eQTL 7.26e-01 -0.0522 0.149 0.893 NK_CD56bright L2
ENSG00000116641 DOCK7 42930 sc-eQTL 3.05e-02 -0.278 0.128 0.893 NK_CD56bright L2
ENSG00000125703 ATG4C -52816 sc-eQTL 3.56e-01 0.133 0.144 0.893 NK_CD56bright L2
ENSG00000132849 PATJ 988910 sc-eQTL 7.98e-01 -0.0362 0.141 0.893 NK_CD56bright L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 5.85e-01 -0.0821 0.15 0.893 NK_CD56bright L2
ENSG00000162607 USP1 295019 sc-eQTL 4.98e-01 -0.105 0.155 0.893 NK_CD56bright L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 8.41e-01 -0.0297 0.148 0.893 NK_CD56bright L2
ENSG00000079739 PGM1 -862095 sc-eQTL 1.13e-01 -0.182 0.114 0.892 NK_CD56dim L2
ENSG00000088035 ALG6 -636259 sc-eQTL 9.05e-01 0.0174 0.146 0.892 NK_CD56dim L2
ENSG00000116641 DOCK7 42930 sc-eQTL 8.13e-01 -0.0301 0.127 0.892 NK_CD56dim L2
ENSG00000125703 ATG4C -52816 sc-eQTL 4.88e-01 0.0893 0.129 0.892 NK_CD56dim L2
ENSG00000132849 PATJ 988910 sc-eQTL 3.99e-01 -0.118 0.139 0.892 NK_CD56dim L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.15e-02 -0.298 0.145 0.892 NK_CD56dim L2
ENSG00000162607 USP1 295019 sc-eQTL 6.12e-01 0.0721 0.142 0.892 NK_CD56dim L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 7.84e-01 0.0435 0.158 0.892 NK_CD56dim L2
ENSG00000079739 PGM1 -862095 sc-eQTL 1.83e-01 0.206 0.154 0.89 NK_HLA L2
ENSG00000088035 ALG6 -636259 sc-eQTL 6.82e-02 0.291 0.159 0.89 NK_HLA L2
ENSG00000116641 DOCK7 42930 sc-eQTL 6.33e-01 -0.0585 0.122 0.89 NK_HLA L2
ENSG00000125703 ATG4C -52816 sc-eQTL 1.89e-01 0.187 0.142 0.89 NK_HLA L2
ENSG00000132849 PATJ 988910 sc-eQTL 1.62e-01 -0.185 0.131 0.89 NK_HLA L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 1.83e-02 -0.351 0.147 0.89 NK_HLA L2
ENSG00000162607 USP1 295019 sc-eQTL 4.19e-01 0.127 0.156 0.89 NK_HLA L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 9.03e-01 -0.0174 0.142 0.89 NK_HLA L2
ENSG00000079739 PGM1 -862095 sc-eQTL 7.23e-01 0.0449 0.126 0.892 NK_cytokine L2
ENSG00000088035 ALG6 -636259 sc-eQTL 1.61e-02 0.341 0.141 0.892 NK_cytokine L2
ENSG00000116641 DOCK7 42930 sc-eQTL 2.60e-01 -0.149 0.132 0.892 NK_cytokine L2
ENSG00000125703 ATG4C -52816 sc-eQTL 1.03e-01 0.22 0.134 0.892 NK_cytokine L2
ENSG00000132849 PATJ 988910 sc-eQTL 5.26e-01 0.0905 0.143 0.892 NK_cytokine L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 3.09e-01 -0.143 0.14 0.892 NK_cytokine L2
ENSG00000162607 USP1 295019 sc-eQTL 4.83e-01 -0.103 0.147 0.892 NK_cytokine L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 3.16e-01 0.15 0.149 0.892 NK_cytokine L2
ENSG00000079739 PGM1 -862095 sc-eQTL 5.01e-01 -0.125 0.185 0.904 PB L2
ENSG00000088035 ALG6 -636259 sc-eQTL 3.36e-01 0.187 0.194 0.904 PB L2
ENSG00000116641 DOCK7 42930 sc-eQTL 6.40e-01 0.0974 0.208 0.904 PB L2
ENSG00000125703 ATG4C -52816 sc-eQTL 5.00e-01 0.122 0.181 0.904 PB L2
ENSG00000132849 PATJ 988910 sc-eQTL 5.57e-01 -0.111 0.188 0.904 PB L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 9.41e-01 -0.0134 0.181 0.904 PB L2
ENSG00000162607 USP1 295019 sc-eQTL 9.55e-02 0.299 0.178 0.904 PB L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 1.74e-01 -0.27 0.197 0.904 PB L2
ENSG00000079739 PGM1 -862095 sc-eQTL 9.09e-01 0.0155 0.135 0.891 Pro_T L2
ENSG00000088035 ALG6 -636259 sc-eQTL 1.79e-01 -0.185 0.137 0.891 Pro_T L2
ENSG00000116641 DOCK7 42930 sc-eQTL 1.47e-01 0.2 0.137 0.891 Pro_T L2
ENSG00000125703 ATG4C -52816 sc-eQTL 8.93e-01 0.0163 0.121 0.891 Pro_T L2
ENSG00000132849 PATJ 988910 sc-eQTL 1.97e-01 -0.17 0.131 0.891 Pro_T L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 9.61e-01 0.00593 0.121 0.891 Pro_T L2
ENSG00000162607 USP1 295019 sc-eQTL 2.28e-01 0.1 0.083 0.891 Pro_T L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 8.04e-01 0.035 0.141 0.891 Pro_T L2
ENSG00000079739 PGM1 -862095 sc-eQTL 8.74e-01 -0.0232 0.146 0.893 Treg L2
ENSG00000088035 ALG6 -636259 sc-eQTL 5.43e-01 -0.0953 0.156 0.893 Treg L2
ENSG00000116641 DOCK7 42930 sc-eQTL 4.34e-01 -0.113 0.144 0.893 Treg L2
ENSG00000125703 ATG4C -52816 sc-eQTL 9.86e-01 0.00257 0.147 0.893 Treg L2
ENSG00000132849 PATJ 988910 sc-eQTL 3.29e-01 -0.133 0.136 0.893 Treg L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.92e-01 0.106 0.153 0.893 Treg L2
ENSG00000162607 USP1 295019 sc-eQTL 8.86e-01 -0.0214 0.149 0.893 Treg L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 3.19e-01 -0.147 0.147 0.893 Treg L2
ENSG00000079739 PGM1 -862095 sc-eQTL 1.55e-01 -0.205 0.143 0.888 cDC L2
ENSG00000088035 ALG6 -636259 sc-eQTL 6.00e-01 -0.0769 0.146 0.888 cDC L2
ENSG00000116641 DOCK7 42930 sc-eQTL 8.04e-01 -0.0356 0.144 0.888 cDC L2
ENSG00000125703 ATG4C -52816 sc-eQTL 9.90e-01 0.00159 0.125 0.888 cDC L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.46e-01 0.121 0.158 0.888 cDC L2
ENSG00000162607 USP1 295019 sc-eQTL 6.94e-01 -0.0554 0.141 0.888 cDC L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 2.44e-01 0.148 0.127 0.888 cDC L2
ENSG00000079739 PGM1 -862095 sc-eQTL 3.23e-01 -0.134 0.135 0.893 cMono_IL1B L2
ENSG00000088035 ALG6 -636259 sc-eQTL 9.91e-02 -0.223 0.135 0.893 cMono_IL1B L2
ENSG00000116641 DOCK7 42930 sc-eQTL 6.95e-01 0.0561 0.143 0.893 cMono_IL1B L2
ENSG00000125703 ATG4C -52816 sc-eQTL 7.04e-01 0.0382 0.1 0.893 cMono_IL1B L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 8.02e-01 -0.0357 0.142 0.893 cMono_IL1B L2
ENSG00000162607 USP1 295019 sc-eQTL 4.94e-01 0.0858 0.125 0.893 cMono_IL1B L2
ENSG00000240563 L1TD1 536467 sc-eQTL 4.11e-01 -0.104 0.126 0.893 cMono_IL1B L2
ENSG00000079739 PGM1 -862095 sc-eQTL 2.20e-01 -0.184 0.15 0.893 cMono_S100A L2
ENSG00000088035 ALG6 -636259 sc-eQTL 9.12e-04 -0.499 0.148 0.893 cMono_S100A L2
ENSG00000116641 DOCK7 42930 sc-eQTL 6.72e-01 -0.0598 0.141 0.893 cMono_S100A L2
ENSG00000125703 ATG4C -52816 sc-eQTL 6.91e-01 0.0486 0.122 0.893 cMono_S100A L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 8.87e-01 0.0196 0.138 0.893 cMono_S100A L2
ENSG00000162607 USP1 295019 sc-eQTL 1.31e-02 -0.35 0.14 0.893 cMono_S100A L2
ENSG00000240563 L1TD1 536467 sc-eQTL 2.22e-01 0.144 0.118 0.893 cMono_S100A L2
ENSG00000079739 PGM1 -862095 sc-eQTL 8.32e-01 -0.0347 0.163 0.891 gdT L2
ENSG00000088035 ALG6 -636259 sc-eQTL 2.90e-01 -0.184 0.173 0.891 gdT L2
ENSG00000116641 DOCK7 42930 sc-eQTL 3.97e-01 -0.145 0.17 0.891 gdT L2
ENSG00000125703 ATG4C -52816 sc-eQTL 3.21e-01 -0.162 0.162 0.891 gdT L2
ENSG00000132849 PATJ 988910 sc-eQTL 8.80e-01 -0.024 0.159 0.891 gdT L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 7.05e-01 -0.0656 0.173 0.891 gdT L2
ENSG00000162607 USP1 295019 sc-eQTL 3.83e-01 0.143 0.163 0.891 gdT L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 3.88e-01 -0.147 0.17 0.891 gdT L2
ENSG00000079739 PGM1 -862095 sc-eQTL 5.09e-01 0.0993 0.15 0.893 intMono L2
ENSG00000088035 ALG6 -636259 sc-eQTL 1.10e-01 0.223 0.139 0.893 intMono L2
ENSG00000116641 DOCK7 42930 sc-eQTL 2.66e-01 0.159 0.143 0.893 intMono L2
ENSG00000125703 ATG4C -52816 sc-eQTL 1.63e-01 0.19 0.136 0.893 intMono L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 2.06e-01 -0.19 0.15 0.893 intMono L2
ENSG00000162607 USP1 295019 sc-eQTL 1.20e-01 -0.237 0.152 0.893 intMono L2
ENSG00000240563 L1TD1 536467 sc-eQTL 5.73e-01 0.0634 0.112 0.893 intMono L2
ENSG00000079739 PGM1 -862095 sc-eQTL 6.45e-01 0.0611 0.132 0.887 ncMono L2
ENSG00000088035 ALG6 -636259 sc-eQTL 4.84e-01 0.102 0.145 0.887 ncMono L2
ENSG00000116641 DOCK7 42930 sc-eQTL 4.67e-01 0.104 0.143 0.887 ncMono L2
ENSG00000125703 ATG4C -52816 sc-eQTL 8.44e-01 -0.0263 0.134 0.887 ncMono L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 8.01e-01 -0.0354 0.14 0.887 ncMono L2
ENSG00000162607 USP1 295019 sc-eQTL 8.60e-01 0.0252 0.143 0.887 ncMono L2
ENSG00000240563 L1TD1 536467 sc-eQTL 7.45e-01 -0.0331 0.101 0.887 ncMono L2
ENSG00000079739 PGM1 -862095 sc-eQTL 8.42e-01 -0.0311 0.156 0.879 pDC L2
ENSG00000088035 ALG6 -636259 sc-eQTL 2.15e-01 0.188 0.151 0.879 pDC L2
ENSG00000116641 DOCK7 42930 sc-eQTL 7.23e-01 -0.0551 0.155 0.879 pDC L2
ENSG00000125703 ATG4C -52816 sc-eQTL 4.82e-01 -0.098 0.139 0.879 pDC L2
ENSG00000142856 ITGB3BP -862405 sc-eQTL 5.55e-01 0.0923 0.156 0.879 pDC L2
ENSG00000162607 USP1 295019 sc-eQTL 2.00e-01 0.204 0.159 0.879 pDC L2
ENSG00000203965 EFCAB7 -792056 sc-eQTL 9.45e-01 -0.0095 0.138 0.879 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -862095 sc-eQTL 7.85e-01 -0.0381 0.14 0.893 B_Memory LOneK1K
ENSG00000088035 ALG6 -636259 sc-eQTL 1.67e-01 -0.213 0.154 0.893 B_Memory LOneK1K
ENSG00000116641 DOCK7 42930 sc-eQTL 2.66e-02 -0.296 0.132 0.893 B_Memory LOneK1K
ENSG00000125703 ATG4C -52816 sc-eQTL 5.55e-01 0.0639 0.108 0.893 B_Memory LOneK1K
ENSG00000132849 PATJ 988910 sc-eQTL 2.10e-01 0.15 0.119 0.893 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -862405 sc-eQTL 3.40e-01 -0.136 0.142 0.893 B_Memory LOneK1K
ENSG00000162607 USP1 295019 sc-eQTL 1.16e-01 0.217 0.137 0.893 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -792056 sc-eQTL 8.74e-01 -0.0235 0.148 0.893 B_Memory LOneK1K
ENSG00000079739 PGM1 -862095 sc-eQTL 1.17e-01 -0.227 0.144 0.893 B_Naive LOneK1K
ENSG00000088035 ALG6 -636259 sc-eQTL 6.83e-01 -0.0611 0.15 0.893 B_Naive LOneK1K
ENSG00000116641 DOCK7 42930 sc-eQTL 9.10e-01 0.0158 0.14 0.893 B_Naive LOneK1K
ENSG00000125703 ATG4C -52816 sc-eQTL 8.75e-01 0.0168 0.107 0.893 B_Naive LOneK1K
ENSG00000132849 PATJ 988910 sc-eQTL 4.54e-01 0.0955 0.127 0.893 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -862405 sc-eQTL 6.60e-01 -0.0664 0.151 0.893 B_Naive LOneK1K
ENSG00000162607 USP1 295019 sc-eQTL 6.00e-01 -0.0679 0.129 0.893 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -792056 sc-eQTL 3.60e-01 0.139 0.151 0.893 B_Naive LOneK1K
ENSG00000079739 PGM1 -862095 sc-eQTL 1.31e-01 -0.208 0.137 0.893 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -636259 sc-eQTL 1.28e-03 -0.426 0.13 0.893 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 42930 sc-eQTL 8.58e-01 0.0241 0.135 0.893 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -52816 sc-eQTL 8.00e-01 0.0236 0.093 0.893 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -862405 sc-eQTL 8.76e-01 -0.0215 0.138 0.893 CD14_Mono LOneK1K
ENSG00000162607 USP1 295019 sc-eQTL 3.29e-01 -0.115 0.117 0.893 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 536467 sc-eQTL 8.53e-01 0.0237 0.127 0.893 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -862095 sc-eQTL 4.47e-01 0.0998 0.131 0.892 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -636259 sc-eQTL 1.69e-01 0.204 0.148 0.892 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 42930 sc-eQTL 2.23e-01 0.18 0.147 0.892 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -52816 sc-eQTL 2.86e-01 0.134 0.125 0.892 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -862405 sc-eQTL 1.72e-01 -0.199 0.145 0.892 CD16_Mono LOneK1K
ENSG00000162607 USP1 295019 sc-eQTL 9.91e-01 -0.00162 0.137 0.892 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 536467 sc-eQTL 6.66e-01 -0.0404 0.0934 0.892 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -862095 sc-eQTL 9.32e-01 -0.00958 0.112 0.892 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -636259 sc-eQTL 8.63e-02 0.231 0.134 0.892 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 42930 sc-eQTL 4.91e-01 -0.0834 0.121 0.892 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -52816 sc-eQTL 5.41e-02 0.232 0.12 0.892 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 988910 sc-eQTL 7.53e-01 -0.0409 0.13 0.892 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -862405 sc-eQTL 4.79e-02 -0.282 0.142 0.892 NK_CD56dim LOneK1K
ENSG00000162607 USP1 295019 sc-eQTL 6.15e-01 0.0654 0.13 0.892 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -792056 sc-eQTL 9.84e-01 0.00324 0.158 0.892 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 42948 eQTL 0.0343 0.0732 0.0345 0.0 0.0 0.113
ENSG00000125703 ATG4C -52816 eQTL 0.00569 0.0725 0.0262 0.0 0.0 0.113
ENSG00000132855 ANGPTL3 133829 pQTL 0.0085 -0.12 0.0455 0.0 0.0 0.112
ENSG00000203965 EFCAB7 -792056 eQTL 2.40e-02 -0.0847 0.0375 0.00105 0.0 0.113

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000230798 \N -593125 2.69e-07 1.11e-07 4.69e-08 2.07e-07 9.25e-08 9.91e-08 1.49e-07 5.33e-08 1.44e-07 4.74e-08 1.56e-07 7.78e-08 1.45e-07 6.56e-08 6e-08 7.5e-08 3.87e-08 1.14e-07 5.39e-08 4.89e-08 1.13e-07 1.26e-07 1.34e-07 3.68e-08 1.4e-07 1.14e-07 1.07e-07 9.57e-08 1.05e-07 1.12e-07 9.64e-08 4.85e-08 3.89e-08 8.25e-08 3.02e-08 3.95e-08 5.3e-08 8.25e-08 6.55e-08 3.77e-08 5.33e-08 1.33e-07 4.7e-08 1.14e-08 3.36e-08 1.89e-08 1.22e-07 3.79e-09 4.85e-08