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Genes within 1Mb (chr1:62707434:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -885977 sc-eQTL 5.44e-01 -0.0764 0.126 0.891 B L1
ENSG00000088035 ALG6 -660141 sc-eQTL 6.32e-01 -0.0624 0.13 0.891 B L1
ENSG00000116641 DOCK7 19048 sc-eQTL 2.33e-01 -0.155 0.13 0.891 B L1
ENSG00000125703 ATG4C -76698 sc-eQTL 5.11e-01 0.0595 0.0905 0.891 B L1
ENSG00000132849 PATJ 965028 sc-eQTL 4.54e-01 0.0824 0.11 0.891 B L1
ENSG00000142856 ITGB3BP -886287 sc-eQTL 4.29e-01 -0.114 0.144 0.891 B L1
ENSG00000162604 TM2D1 982011 sc-eQTL 8.01e-01 -0.0277 0.11 0.891 B L1
ENSG00000162607 USP1 271137 sc-eQTL 6.80e-01 0.0516 0.125 0.891 B L1
ENSG00000203965 EFCAB7 -815938 sc-eQTL 6.87e-01 0.0595 0.148 0.891 B L1
ENSG00000079739 PGM1 -885977 sc-eQTL 5.44e-01 -0.0649 0.107 0.891 CD4T L1
ENSG00000088035 ALG6 -660141 sc-eQTL 5.11e-01 0.0777 0.118 0.891 CD4T L1
ENSG00000116641 DOCK7 19048 sc-eQTL 4.78e-02 -0.236 0.118 0.891 CD4T L1
ENSG00000125703 ATG4C -76698 sc-eQTL 6.13e-01 0.0489 0.0964 0.891 CD4T L1
ENSG00000132849 PATJ 965028 sc-eQTL 8.70e-02 0.134 0.0778 0.891 CD4T L1
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.07e-01 -0.0705 0.137 0.891 CD4T L1
ENSG00000162604 TM2D1 982011 sc-eQTL 7.69e-02 0.168 0.0944 0.891 CD4T L1
ENSG00000162607 USP1 271137 sc-eQTL 4.63e-01 0.0687 0.0935 0.891 CD4T L1
ENSG00000203965 EFCAB7 -815938 sc-eQTL 8.15e-01 -0.0289 0.123 0.891 CD4T L1
ENSG00000079739 PGM1 -885977 sc-eQTL 1.36e-01 -0.177 0.118 0.891 CD8T L1
ENSG00000088035 ALG6 -660141 sc-eQTL 6.62e-01 0.0574 0.131 0.891 CD8T L1
ENSG00000116641 DOCK7 19048 sc-eQTL 9.27e-01 0.0122 0.133 0.891 CD8T L1
ENSG00000125703 ATG4C -76698 sc-eQTL 3.80e-03 0.362 0.124 0.891 CD8T L1
ENSG00000132849 PATJ 965028 sc-eQTL 3.97e-01 0.0651 0.0767 0.891 CD8T L1
ENSG00000142856 ITGB3BP -886287 sc-eQTL 3.28e-01 -0.138 0.141 0.891 CD8T L1
ENSG00000162604 TM2D1 982011 sc-eQTL 4.19e-01 0.0932 0.115 0.891 CD8T L1
ENSG00000162607 USP1 271137 sc-eQTL 1.71e-01 0.15 0.109 0.891 CD8T L1
ENSG00000203965 EFCAB7 -815938 sc-eQTL 4.27e-01 0.112 0.14 0.891 CD8T L1
ENSG00000079739 PGM1 -885977 sc-eQTL 1.65e-01 -0.184 0.132 0.89 DC L1
ENSG00000088035 ALG6 -660141 sc-eQTL 7.93e-01 0.036 0.137 0.89 DC L1
ENSG00000116641 DOCK7 19048 sc-eQTL 6.08e-01 -0.0722 0.141 0.89 DC L1
ENSG00000125703 ATG4C -76698 sc-eQTL 3.13e-01 -0.111 0.11 0.89 DC L1
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.69e-01 0.0658 0.154 0.89 DC L1
ENSG00000162604 TM2D1 982011 sc-eQTL 7.06e-01 0.0485 0.128 0.89 DC L1
ENSG00000162607 USP1 271137 sc-eQTL 6.43e-01 0.0622 0.134 0.89 DC L1
ENSG00000203965 EFCAB7 -815938 sc-eQTL 6.18e-01 0.0669 0.134 0.89 DC L1
ENSG00000079739 PGM1 -885977 sc-eQTL 2.73e-01 -0.141 0.128 0.891 Mono L1
ENSG00000088035 ALG6 -660141 sc-eQTL 2.21e-02 -0.305 0.132 0.891 Mono L1
ENSG00000116641 DOCK7 19048 sc-eQTL 8.02e-01 0.0324 0.129 0.891 Mono L1
ENSG00000125703 ATG4C -76698 sc-eQTL 7.16e-01 0.0318 0.0874 0.891 Mono L1
ENSG00000142856 ITGB3BP -886287 sc-eQTL 5.99e-01 -0.0728 0.138 0.891 Mono L1
ENSG00000162604 TM2D1 982011 sc-eQTL 9.36e-01 -0.00785 0.097 0.891 Mono L1
ENSG00000162607 USP1 271137 sc-eQTL 7.83e-01 -0.0313 0.113 0.891 Mono L1
ENSG00000240563 L1TD1 512585 sc-eQTL 5.13e-01 -0.0693 0.106 0.891 Mono L1
ENSG00000079739 PGM1 -885977 sc-eQTL 8.25e-01 0.0245 0.11 0.891 NK L1
ENSG00000088035 ALG6 -660141 sc-eQTL 1.69e-01 0.178 0.129 0.891 NK L1
ENSG00000116641 DOCK7 19048 sc-eQTL 9.97e-02 -0.175 0.106 0.891 NK L1
ENSG00000125703 ATG4C -76698 sc-eQTL 3.55e-02 0.24 0.113 0.891 NK L1
ENSG00000132849 PATJ 965028 sc-eQTL 7.25e-01 -0.0395 0.112 0.891 NK L1
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.55e-02 -0.244 0.141 0.891 NK L1
ENSG00000162604 TM2D1 982011 sc-eQTL 5.82e-01 0.0633 0.115 0.891 NK L1
ENSG00000162607 USP1 271137 sc-eQTL 5.68e-01 0.0727 0.127 0.891 NK L1
ENSG00000203965 EFCAB7 -815938 sc-eQTL 9.04e-01 0.0186 0.154 0.891 NK L1
ENSG00000079739 PGM1 -885977 sc-eQTL 7.46e-02 -0.223 0.124 0.891 Other_T L1
ENSG00000088035 ALG6 -660141 sc-eQTL 3.99e-01 0.106 0.126 0.891 Other_T L1
ENSG00000116641 DOCK7 19048 sc-eQTL 8.15e-01 -0.0302 0.128 0.891 Other_T L1
ENSG00000125703 ATG4C -76698 sc-eQTL 6.41e-01 0.0519 0.111 0.891 Other_T L1
ENSG00000132849 PATJ 965028 sc-eQTL 4.72e-01 0.0745 0.103 0.891 Other_T L1
ENSG00000142856 ITGB3BP -886287 sc-eQTL 1.19e-01 -0.153 0.098 0.891 Other_T L1
ENSG00000162604 TM2D1 982011 sc-eQTL 9.41e-02 -0.203 0.121 0.891 Other_T L1
ENSG00000162607 USP1 271137 sc-eQTL 1.03e-01 0.139 0.0849 0.891 Other_T L1
ENSG00000203965 EFCAB7 -815938 sc-eQTL 6.01e-01 -0.0796 0.152 0.891 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -885977 sc-eQTL 4.74e-01 -0.122 0.169 0.893 B_Activated L2
ENSG00000088035 ALG6 -660141 sc-eQTL 8.23e-01 0.0365 0.163 0.893 B_Activated L2
ENSG00000116641 DOCK7 19048 sc-eQTL 2.96e-01 -0.158 0.151 0.893 B_Activated L2
ENSG00000125703 ATG4C -76698 sc-eQTL 6.15e-01 0.0801 0.159 0.893 B_Activated L2
ENSG00000132849 PATJ 965028 sc-eQTL 5.70e-01 0.0769 0.135 0.893 B_Activated L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.01e-01 -0.0393 0.156 0.893 B_Activated L2
ENSG00000162604 TM2D1 982011 sc-eQTL 8.09e-01 -0.0416 0.172 0.893 B_Activated L2
ENSG00000162607 USP1 271137 sc-eQTL 9.95e-01 0.000993 0.169 0.893 B_Activated L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 9.75e-01 -0.00457 0.147 0.893 B_Activated L2
ENSG00000079739 PGM1 -885977 sc-eQTL 9.02e-01 0.0183 0.149 0.891 B_Intermediate L2
ENSG00000088035 ALG6 -660141 sc-eQTL 8.36e-02 -0.261 0.15 0.891 B_Intermediate L2
ENSG00000116641 DOCK7 19048 sc-eQTL 4.78e-03 -0.404 0.142 0.891 B_Intermediate L2
ENSG00000125703 ATG4C -76698 sc-eQTL 9.17e-01 0.0127 0.122 0.891 B_Intermediate L2
ENSG00000132849 PATJ 965028 sc-eQTL 1.09e-01 0.212 0.132 0.891 B_Intermediate L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 5.39e-01 -0.0894 0.145 0.891 B_Intermediate L2
ENSG00000162604 TM2D1 982011 sc-eQTL 9.33e-01 -0.0117 0.139 0.891 B_Intermediate L2
ENSG00000162607 USP1 271137 sc-eQTL 4.99e-01 0.0983 0.145 0.891 B_Intermediate L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 5.85e-01 0.0789 0.144 0.891 B_Intermediate L2
ENSG00000079739 PGM1 -885977 sc-eQTL 9.07e-01 -0.0169 0.144 0.89 B_Memory L2
ENSG00000088035 ALG6 -660141 sc-eQTL 8.93e-01 0.0198 0.147 0.89 B_Memory L2
ENSG00000116641 DOCK7 19048 sc-eQTL 2.45e-01 -0.16 0.137 0.89 B_Memory L2
ENSG00000125703 ATG4C -76698 sc-eQTL 5.96e-01 0.0694 0.131 0.89 B_Memory L2
ENSG00000132849 PATJ 965028 sc-eQTL 6.73e-01 -0.0552 0.13 0.89 B_Memory L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 9.06e-01 0.0176 0.15 0.89 B_Memory L2
ENSG00000162604 TM2D1 982011 sc-eQTL 8.31e-01 0.0313 0.147 0.89 B_Memory L2
ENSG00000162607 USP1 271137 sc-eQTL 3.13e-01 0.152 0.15 0.89 B_Memory L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 2.20e-01 -0.182 0.148 0.89 B_Memory L2
ENSG00000079739 PGM1 -885977 sc-eQTL 3.04e-01 -0.153 0.148 0.891 B_Naive1 L2
ENSG00000088035 ALG6 -660141 sc-eQTL 3.08e-01 -0.152 0.149 0.891 B_Naive1 L2
ENSG00000116641 DOCK7 19048 sc-eQTL 8.35e-01 0.0298 0.143 0.891 B_Naive1 L2
ENSG00000125703 ATG4C -76698 sc-eQTL 6.72e-01 0.0466 0.11 0.891 B_Naive1 L2
ENSG00000132849 PATJ 965028 sc-eQTL 3.19e-01 0.141 0.141 0.891 B_Naive1 L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 7.46e-01 -0.0473 0.146 0.891 B_Naive1 L2
ENSG00000162604 TM2D1 982011 sc-eQTL 9.12e-01 0.0144 0.13 0.891 B_Naive1 L2
ENSG00000162607 USP1 271137 sc-eQTL 5.69e-01 -0.0732 0.128 0.891 B_Naive1 L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 3.79e-01 0.137 0.156 0.891 B_Naive1 L2
ENSG00000079739 PGM1 -885977 sc-eQTL 2.24e-01 -0.176 0.145 0.891 B_Naive2 L2
ENSG00000088035 ALG6 -660141 sc-eQTL 8.20e-01 0.0345 0.151 0.891 B_Naive2 L2
ENSG00000116641 DOCK7 19048 sc-eQTL 4.30e-01 0.115 0.145 0.891 B_Naive2 L2
ENSG00000125703 ATG4C -76698 sc-eQTL 3.23e-01 -0.138 0.14 0.891 B_Naive2 L2
ENSG00000132849 PATJ 965028 sc-eQTL 8.48e-01 0.0275 0.143 0.891 B_Naive2 L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 9.60e-01 -0.00756 0.152 0.891 B_Naive2 L2
ENSG00000162604 TM2D1 982011 sc-eQTL 2.83e-01 -0.156 0.145 0.891 B_Naive2 L2
ENSG00000162607 USP1 271137 sc-eQTL 6.40e-01 -0.0677 0.145 0.891 B_Naive2 L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 7.43e-01 0.0497 0.151 0.891 B_Naive2 L2
ENSG00000079739 PGM1 -885977 sc-eQTL 6.47e-01 -0.0683 0.149 0.891 CD4_CTL L2
ENSG00000088035 ALG6 -660141 sc-eQTL 8.20e-01 -0.0358 0.157 0.891 CD4_CTL L2
ENSG00000116641 DOCK7 19048 sc-eQTL 2.00e-01 0.176 0.137 0.891 CD4_CTL L2
ENSG00000125703 ATG4C -76698 sc-eQTL 8.27e-02 0.246 0.141 0.891 CD4_CTL L2
ENSG00000132849 PATJ 965028 sc-eQTL 2.44e-01 -0.133 0.114 0.891 CD4_CTL L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.77e-01 0.0237 0.152 0.891 CD4_CTL L2
ENSG00000162604 TM2D1 982011 sc-eQTL 1.96e-02 0.338 0.144 0.891 CD4_CTL L2
ENSG00000162607 USP1 271137 sc-eQTL 8.32e-01 0.0308 0.145 0.891 CD4_CTL L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 2.14e-01 -0.179 0.144 0.891 CD4_CTL L2
ENSG00000079739 PGM1 -885977 sc-eQTL 2.74e-01 -0.132 0.12 0.891 CD4_Naive L2
ENSG00000088035 ALG6 -660141 sc-eQTL 1.35e-02 0.321 0.129 0.891 CD4_Naive L2
ENSG00000116641 DOCK7 19048 sc-eQTL 3.58e-02 -0.269 0.127 0.891 CD4_Naive L2
ENSG00000125703 ATG4C -76698 sc-eQTL 9.79e-01 0.00306 0.114 0.891 CD4_Naive L2
ENSG00000132849 PATJ 965028 sc-eQTL 3.42e-02 0.168 0.0789 0.891 CD4_Naive L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.95e-01 -0.0545 0.139 0.891 CD4_Naive L2
ENSG00000162604 TM2D1 982011 sc-eQTL 1.60e-01 0.161 0.114 0.891 CD4_Naive L2
ENSG00000162607 USP1 271137 sc-eQTL 5.36e-01 0.0658 0.106 0.891 CD4_Naive L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 9.84e-01 0.0028 0.138 0.891 CD4_Naive L2
ENSG00000079739 PGM1 -885977 sc-eQTL 4.75e-01 0.0894 0.125 0.891 CD4_TCM L2
ENSG00000088035 ALG6 -660141 sc-eQTL 2.93e-02 -0.315 0.143 0.891 CD4_TCM L2
ENSG00000116641 DOCK7 19048 sc-eQTL 1.27e-01 -0.196 0.128 0.891 CD4_TCM L2
ENSG00000125703 ATG4C -76698 sc-eQTL 4.59e-01 0.0927 0.125 0.891 CD4_TCM L2
ENSG00000132849 PATJ 965028 sc-eQTL 6.29e-01 0.0486 0.1 0.891 CD4_TCM L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.78e-01 -0.0228 0.147 0.891 CD4_TCM L2
ENSG00000162604 TM2D1 982011 sc-eQTL 1.62e-01 0.164 0.117 0.891 CD4_TCM L2
ENSG00000162607 USP1 271137 sc-eQTL 7.39e-01 0.0403 0.121 0.891 CD4_TCM L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 7.23e-01 0.0506 0.143 0.891 CD4_TCM L2
ENSG00000079739 PGM1 -885977 sc-eQTL 9.86e-01 -0.00254 0.148 0.891 CD4_TEM L2
ENSG00000088035 ALG6 -660141 sc-eQTL 2.05e-01 -0.189 0.148 0.891 CD4_TEM L2
ENSG00000116641 DOCK7 19048 sc-eQTL 1.45e-01 -0.211 0.145 0.891 CD4_TEM L2
ENSG00000125703 ATG4C -76698 sc-eQTL 8.10e-01 0.0339 0.141 0.891 CD4_TEM L2
ENSG00000132849 PATJ 965028 sc-eQTL 2.00e-01 0.168 0.131 0.891 CD4_TEM L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.73e-01 -0.0615 0.146 0.891 CD4_TEM L2
ENSG00000162604 TM2D1 982011 sc-eQTL 4.53e-01 -0.104 0.138 0.891 CD4_TEM L2
ENSG00000162607 USP1 271137 sc-eQTL 5.50e-01 0.0826 0.138 0.891 CD4_TEM L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 5.20e-01 0.0971 0.151 0.891 CD4_TEM L2
ENSG00000079739 PGM1 -885977 sc-eQTL 2.39e-01 -0.157 0.133 0.891 CD8_CTL L2
ENSG00000088035 ALG6 -660141 sc-eQTL 6.80e-01 -0.0584 0.141 0.891 CD8_CTL L2
ENSG00000116641 DOCK7 19048 sc-eQTL 7.38e-01 0.0449 0.134 0.891 CD8_CTL L2
ENSG00000125703 ATG4C -76698 sc-eQTL 3.76e-02 0.296 0.142 0.891 CD8_CTL L2
ENSG00000132849 PATJ 965028 sc-eQTL 6.04e-01 -0.0702 0.135 0.891 CD8_CTL L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 2.71e-01 -0.163 0.148 0.891 CD8_CTL L2
ENSG00000162604 TM2D1 982011 sc-eQTL 4.53e-02 0.248 0.123 0.891 CD8_CTL L2
ENSG00000162607 USP1 271137 sc-eQTL 5.00e-01 0.0898 0.133 0.891 CD8_CTL L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 6.32e-01 0.073 0.152 0.891 CD8_CTL L2
ENSG00000079739 PGM1 -885977 sc-eQTL 5.51e-01 0.0824 0.138 0.891 CD8_Naive L2
ENSG00000088035 ALG6 -660141 sc-eQTL 3.41e-01 0.136 0.143 0.891 CD8_Naive L2
ENSG00000116641 DOCK7 19048 sc-eQTL 2.96e-01 -0.154 0.147 0.891 CD8_Naive L2
ENSG00000125703 ATG4C -76698 sc-eQTL 4.51e-02 0.283 0.141 0.891 CD8_Naive L2
ENSG00000132849 PATJ 965028 sc-eQTL 7.23e-01 0.0385 0.108 0.891 CD8_Naive L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.44e-01 -0.0664 0.144 0.891 CD8_Naive L2
ENSG00000162604 TM2D1 982011 sc-eQTL 1.62e-01 -0.185 0.132 0.891 CD8_Naive L2
ENSG00000162607 USP1 271137 sc-eQTL 5.21e-01 0.0779 0.121 0.891 CD8_Naive L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 8.39e-01 0.0276 0.135 0.891 CD8_Naive L2
ENSG00000079739 PGM1 -885977 sc-eQTL 2.19e-01 -0.186 0.151 0.891 CD8_TCM L2
ENSG00000088035 ALG6 -660141 sc-eQTL 7.25e-01 -0.0542 0.154 0.891 CD8_TCM L2
ENSG00000116641 DOCK7 19048 sc-eQTL 8.00e-01 -0.038 0.15 0.891 CD8_TCM L2
ENSG00000125703 ATG4C -76698 sc-eQTL 7.75e-01 -0.0439 0.153 0.891 CD8_TCM L2
ENSG00000132849 PATJ 965028 sc-eQTL 7.22e-01 -0.0503 0.141 0.891 CD8_TCM L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 4.05e-02 -0.304 0.147 0.891 CD8_TCM L2
ENSG00000162604 TM2D1 982011 sc-eQTL 3.21e-01 0.142 0.143 0.891 CD8_TCM L2
ENSG00000162607 USP1 271137 sc-eQTL 1.16e-01 0.225 0.143 0.891 CD8_TCM L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 2.61e-01 0.171 0.151 0.891 CD8_TCM L2
ENSG00000079739 PGM1 -885977 sc-eQTL 6.58e-01 0.0686 0.155 0.897 CD8_TEM L2
ENSG00000088035 ALG6 -660141 sc-eQTL 3.99e-01 0.131 0.155 0.897 CD8_TEM L2
ENSG00000116641 DOCK7 19048 sc-eQTL 7.35e-01 0.051 0.15 0.897 CD8_TEM L2
ENSG00000125703 ATG4C -76698 sc-eQTL 1.59e-01 0.204 0.144 0.897 CD8_TEM L2
ENSG00000132849 PATJ 965028 sc-eQTL 3.39e-01 0.14 0.146 0.897 CD8_TEM L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 2.47e-01 0.181 0.156 0.897 CD8_TEM L2
ENSG00000162604 TM2D1 982011 sc-eQTL 4.53e-01 0.112 0.149 0.897 CD8_TEM L2
ENSG00000162607 USP1 271137 sc-eQTL 5.84e-01 -0.082 0.149 0.897 CD8_TEM L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 4.61e-01 -0.112 0.152 0.897 CD8_TEM L2
ENSG00000079739 PGM1 -885977 sc-eQTL 1.17e-02 -0.369 0.145 0.892 MAIT L2
ENSG00000088035 ALG6 -660141 sc-eQTL 3.46e-01 0.137 0.145 0.892 MAIT L2
ENSG00000116641 DOCK7 19048 sc-eQTL 6.86e-01 0.0566 0.14 0.892 MAIT L2
ENSG00000125703 ATG4C -76698 sc-eQTL 6.98e-01 0.0572 0.147 0.892 MAIT L2
ENSG00000132849 PATJ 965028 sc-eQTL 1.62e-01 0.174 0.124 0.892 MAIT L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 1.86e-01 -0.195 0.147 0.892 MAIT L2
ENSG00000162604 TM2D1 982011 sc-eQTL 6.79e-02 -0.258 0.14 0.892 MAIT L2
ENSG00000162607 USP1 271137 sc-eQTL 8.98e-01 -0.0188 0.146 0.892 MAIT L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 3.50e-01 -0.142 0.152 0.892 MAIT L2
ENSG00000079739 PGM1 -885977 sc-eQTL 4.59e-01 -0.107 0.144 0.891 NK_CD56bright L2
ENSG00000088035 ALG6 -660141 sc-eQTL 8.42e-01 -0.0296 0.148 0.891 NK_CD56bright L2
ENSG00000116641 DOCK7 19048 sc-eQTL 2.17e-02 -0.293 0.127 0.891 NK_CD56bright L2
ENSG00000125703 ATG4C -76698 sc-eQTL 2.97e-01 0.15 0.143 0.891 NK_CD56bright L2
ENSG00000132849 PATJ 965028 sc-eQTL 7.73e-01 -0.0406 0.141 0.891 NK_CD56bright L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.22e-01 -0.0738 0.149 0.891 NK_CD56bright L2
ENSG00000162604 TM2D1 982011 sc-eQTL 5.17e-01 0.0927 0.143 0.891 NK_CD56bright L2
ENSG00000162607 USP1 271137 sc-eQTL 5.11e-01 -0.101 0.154 0.891 NK_CD56bright L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 6.84e-01 -0.06 0.147 0.891 NK_CD56bright L2
ENSG00000079739 PGM1 -885977 sc-eQTL 1.45e-01 -0.166 0.114 0.89 NK_CD56dim L2
ENSG00000088035 ALG6 -660141 sc-eQTL 9.88e-01 -0.00211 0.145 0.89 NK_CD56dim L2
ENSG00000116641 DOCK7 19048 sc-eQTL 8.86e-01 -0.0181 0.126 0.89 NK_CD56dim L2
ENSG00000125703 ATG4C -76698 sc-eQTL 4.47e-01 0.0976 0.128 0.89 NK_CD56dim L2
ENSG00000132849 PATJ 965028 sc-eQTL 3.95e-01 -0.118 0.139 0.89 NK_CD56dim L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 3.60e-02 -0.305 0.144 0.89 NK_CD56dim L2
ENSG00000162604 TM2D1 982011 sc-eQTL 3.34e-01 0.128 0.132 0.89 NK_CD56dim L2
ENSG00000162607 USP1 271137 sc-eQTL 5.49e-01 0.0848 0.141 0.89 NK_CD56dim L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 7.63e-01 0.0475 0.158 0.89 NK_CD56dim L2
ENSG00000079739 PGM1 -885977 sc-eQTL 1.34e-01 0.23 0.153 0.888 NK_HLA L2
ENSG00000088035 ALG6 -660141 sc-eQTL 4.43e-02 0.319 0.158 0.888 NK_HLA L2
ENSG00000116641 DOCK7 19048 sc-eQTL 5.45e-01 -0.0738 0.122 0.888 NK_HLA L2
ENSG00000125703 ATG4C -76698 sc-eQTL 1.95e-01 0.183 0.141 0.888 NK_HLA L2
ENSG00000132849 PATJ 965028 sc-eQTL 1.50e-01 -0.189 0.131 0.888 NK_HLA L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 2.19e-02 -0.339 0.147 0.888 NK_HLA L2
ENSG00000162604 TM2D1 982011 sc-eQTL 5.06e-01 -0.0995 0.149 0.888 NK_HLA L2
ENSG00000162607 USP1 271137 sc-eQTL 3.60e-01 0.142 0.155 0.888 NK_HLA L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 8.83e-01 -0.0208 0.142 0.888 NK_HLA L2
ENSG00000079739 PGM1 -885977 sc-eQTL 6.01e-01 0.0658 0.126 0.89 NK_cytokine L2
ENSG00000088035 ALG6 -660141 sc-eQTL 1.23e-02 0.353 0.14 0.89 NK_cytokine L2
ENSG00000116641 DOCK7 19048 sc-eQTL 2.48e-01 -0.152 0.131 0.89 NK_cytokine L2
ENSG00000125703 ATG4C -76698 sc-eQTL 1.18e-01 0.21 0.134 0.89 NK_cytokine L2
ENSG00000132849 PATJ 965028 sc-eQTL 5.35e-01 0.0882 0.142 0.89 NK_cytokine L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 4.18e-01 -0.113 0.139 0.89 NK_cytokine L2
ENSG00000162604 TM2D1 982011 sc-eQTL 6.88e-01 0.0559 0.139 0.89 NK_cytokine L2
ENSG00000162607 USP1 271137 sc-eQTL 5.48e-01 -0.0881 0.146 0.89 NK_cytokine L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 2.86e-01 0.158 0.148 0.89 NK_cytokine L2
ENSG00000079739 PGM1 -885977 sc-eQTL 5.03e-01 -0.123 0.184 0.9 PB L2
ENSG00000088035 ALG6 -660141 sc-eQTL 4.26e-01 0.154 0.193 0.9 PB L2
ENSG00000116641 DOCK7 19048 sc-eQTL 9.47e-01 0.0138 0.207 0.9 PB L2
ENSG00000125703 ATG4C -76698 sc-eQTL 4.01e-01 0.152 0.18 0.9 PB L2
ENSG00000132849 PATJ 965028 sc-eQTL 5.85e-01 -0.102 0.187 0.9 PB L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.23e-01 0.0404 0.18 0.9 PB L2
ENSG00000162604 TM2D1 982011 sc-eQTL 8.07e-02 0.316 0.179 0.9 PB L2
ENSG00000162607 USP1 271137 sc-eQTL 1.04e-01 0.291 0.177 0.9 PB L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 2.72e-01 -0.217 0.197 0.9 PB L2
ENSG00000079739 PGM1 -885977 sc-eQTL 8.55e-01 0.0245 0.134 0.889 Pro_T L2
ENSG00000088035 ALG6 -660141 sc-eQTL 1.82e-01 -0.182 0.136 0.889 Pro_T L2
ENSG00000116641 DOCK7 19048 sc-eQTL 1.95e-01 0.177 0.136 0.889 Pro_T L2
ENSG00000125703 ATG4C -76698 sc-eQTL 8.23e-01 0.0268 0.12 0.889 Pro_T L2
ENSG00000132849 PATJ 965028 sc-eQTL 1.87e-01 -0.173 0.13 0.889 Pro_T L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 9.33e-01 0.0101 0.12 0.889 Pro_T L2
ENSG00000162604 TM2D1 982011 sc-eQTL 3.35e-01 0.141 0.146 0.889 Pro_T L2
ENSG00000162607 USP1 271137 sc-eQTL 2.56e-01 0.0939 0.0825 0.889 Pro_T L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 8.94e-01 0.0187 0.14 0.889 Pro_T L2
ENSG00000079739 PGM1 -885977 sc-eQTL 8.83e-01 -0.0216 0.146 0.891 Treg L2
ENSG00000088035 ALG6 -660141 sc-eQTL 4.27e-01 -0.124 0.156 0.891 Treg L2
ENSG00000116641 DOCK7 19048 sc-eQTL 3.01e-01 -0.148 0.143 0.891 Treg L2
ENSG00000125703 ATG4C -76698 sc-eQTL 9.21e-01 0.0145 0.146 0.891 Treg L2
ENSG00000132849 PATJ 965028 sc-eQTL 4.68e-01 -0.0985 0.135 0.891 Treg L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 5.54e-01 0.0907 0.153 0.891 Treg L2
ENSG00000162604 TM2D1 982011 sc-eQTL 9.68e-01 0.00594 0.149 0.891 Treg L2
ENSG00000162607 USP1 271137 sc-eQTL 8.97e-01 -0.0192 0.148 0.891 Treg L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 1.94e-01 -0.19 0.146 0.891 Treg L2
ENSG00000079739 PGM1 -885977 sc-eQTL 1.40e-01 -0.211 0.142 0.885 cDC L2
ENSG00000088035 ALG6 -660141 sc-eQTL 4.97e-01 -0.0987 0.145 0.885 cDC L2
ENSG00000116641 DOCK7 19048 sc-eQTL 9.87e-01 -0.00234 0.142 0.885 cDC L2
ENSG00000125703 ATG4C -76698 sc-eQTL 6.06e-01 -0.0638 0.124 0.885 cDC L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.36e-01 0.0742 0.157 0.885 cDC L2
ENSG00000162604 TM2D1 982011 sc-eQTL 1.00e+00 8.4e-05 0.154 0.885 cDC L2
ENSG00000162607 USP1 271137 sc-eQTL 5.92e-01 -0.0749 0.139 0.885 cDC L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 2.26e-01 0.152 0.125 0.885 cDC L2
ENSG00000079739 PGM1 -885977 sc-eQTL 3.68e-01 -0.121 0.134 0.891 cMono_IL1B L2
ENSG00000088035 ALG6 -660141 sc-eQTL 7.36e-02 -0.24 0.134 0.891 cMono_IL1B L2
ENSG00000116641 DOCK7 19048 sc-eQTL 6.01e-01 0.0743 0.142 0.891 cMono_IL1B L2
ENSG00000125703 ATG4C -76698 sc-eQTL 8.09e-01 0.0242 0.0998 0.891 cMono_IL1B L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.88e-01 0.02 0.141 0.891 cMono_IL1B L2
ENSG00000162604 TM2D1 982011 sc-eQTL 2.61e-01 0.116 0.103 0.891 cMono_IL1B L2
ENSG00000162607 USP1 271137 sc-eQTL 4.93e-01 0.0856 0.125 0.891 cMono_IL1B L2
ENSG00000240563 L1TD1 512585 sc-eQTL 3.92e-01 -0.107 0.125 0.891 cMono_IL1B L2
ENSG00000079739 PGM1 -885977 sc-eQTL 2.58e-01 -0.169 0.149 0.891 cMono_S100A L2
ENSG00000088035 ALG6 -660141 sc-eQTL 1.61e-03 -0.473 0.148 0.891 cMono_S100A L2
ENSG00000116641 DOCK7 19048 sc-eQTL 5.05e-01 -0.0937 0.14 0.891 cMono_S100A L2
ENSG00000125703 ATG4C -76698 sc-eQTL 8.30e-01 0.0261 0.122 0.891 cMono_S100A L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.61e-01 0.024 0.137 0.891 cMono_S100A L2
ENSG00000162604 TM2D1 982011 sc-eQTL 3.62e-01 -0.113 0.124 0.891 cMono_S100A L2
ENSG00000162607 USP1 271137 sc-eQTL 1.74e-02 -0.334 0.139 0.891 cMono_S100A L2
ENSG00000240563 L1TD1 512585 sc-eQTL 1.93e-01 0.153 0.117 0.891 cMono_S100A L2
ENSG00000079739 PGM1 -885977 sc-eQTL 6.70e-01 -0.0691 0.162 0.888 gdT L2
ENSG00000088035 ALG6 -660141 sc-eQTL 2.80e-01 -0.186 0.172 0.888 gdT L2
ENSG00000116641 DOCK7 19048 sc-eQTL 4.87e-01 -0.118 0.169 0.888 gdT L2
ENSG00000125703 ATG4C -76698 sc-eQTL 3.65e-01 -0.146 0.161 0.888 gdT L2
ENSG00000132849 PATJ 965028 sc-eQTL 9.23e-01 -0.0153 0.158 0.888 gdT L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 7.65e-01 -0.0514 0.171 0.888 gdT L2
ENSG00000162604 TM2D1 982011 sc-eQTL 5.70e-01 0.0944 0.166 0.888 gdT L2
ENSG00000162607 USP1 271137 sc-eQTL 4.83e-01 0.114 0.162 0.888 gdT L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 4.63e-01 -0.124 0.168 0.888 gdT L2
ENSG00000079739 PGM1 -885977 sc-eQTL 5.03e-01 0.0999 0.149 0.891 intMono L2
ENSG00000088035 ALG6 -660141 sc-eQTL 1.39e-01 0.205 0.138 0.891 intMono L2
ENSG00000116641 DOCK7 19048 sc-eQTL 2.70e-01 0.157 0.141 0.891 intMono L2
ENSG00000125703 ATG4C -76698 sc-eQTL 1.37e-01 0.201 0.135 0.891 intMono L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 2.91e-01 -0.158 0.149 0.891 intMono L2
ENSG00000162604 TM2D1 982011 sc-eQTL 1.39e-02 -0.351 0.141 0.891 intMono L2
ENSG00000162607 USP1 271137 sc-eQTL 1.14e-01 -0.239 0.151 0.891 intMono L2
ENSG00000240563 L1TD1 512585 sc-eQTL 4.95e-01 0.0762 0.111 0.891 intMono L2
ENSG00000079739 PGM1 -885977 sc-eQTL 5.92e-01 0.0705 0.131 0.885 ncMono L2
ENSG00000088035 ALG6 -660141 sc-eQTL 6.50e-01 0.0655 0.144 0.885 ncMono L2
ENSG00000116641 DOCK7 19048 sc-eQTL 5.59e-01 0.083 0.142 0.885 ncMono L2
ENSG00000125703 ATG4C -76698 sc-eQTL 8.16e-01 -0.031 0.133 0.885 ncMono L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.57e-01 -0.025 0.139 0.885 ncMono L2
ENSG00000162604 TM2D1 982011 sc-eQTL 9.12e-01 -0.0158 0.143 0.885 ncMono L2
ENSG00000162607 USP1 271137 sc-eQTL 9.94e-01 -0.00111 0.142 0.885 ncMono L2
ENSG00000240563 L1TD1 512585 sc-eQTL 6.62e-01 -0.044 0.1 0.885 ncMono L2
ENSG00000079739 PGM1 -885977 sc-eQTL 8.32e-01 -0.033 0.155 0.876 pDC L2
ENSG00000088035 ALG6 -660141 sc-eQTL 1.35e-01 0.226 0.15 0.876 pDC L2
ENSG00000116641 DOCK7 19048 sc-eQTL 5.75e-01 -0.0867 0.154 0.876 pDC L2
ENSG00000125703 ATG4C -76698 sc-eQTL 5.76e-01 -0.0774 0.138 0.876 pDC L2
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.16e-01 0.078 0.155 0.876 pDC L2
ENSG00000162604 TM2D1 982011 sc-eQTL 8.55e-01 0.0248 0.136 0.876 pDC L2
ENSG00000162607 USP1 271137 sc-eQTL 1.36e-01 0.236 0.157 0.876 pDC L2
ENSG00000203965 EFCAB7 -815938 sc-eQTL 9.03e-01 0.0168 0.138 0.876 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -885977 sc-eQTL 8.36e-01 -0.0288 0.139 0.891 B_Memory LOneK1K
ENSG00000088035 ALG6 -660141 sc-eQTL 1.59e-01 -0.216 0.153 0.891 B_Memory LOneK1K
ENSG00000116641 DOCK7 19048 sc-eQTL 2.48e-02 -0.298 0.132 0.891 B_Memory LOneK1K
ENSG00000125703 ATG4C -76698 sc-eQTL 6.45e-01 0.0498 0.108 0.891 B_Memory LOneK1K
ENSG00000132849 PATJ 965028 sc-eQTL 2.45e-01 0.139 0.119 0.891 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -886287 sc-eQTL 3.60e-01 -0.13 0.141 0.891 B_Memory LOneK1K
ENSG00000162604 TM2D1 982011 sc-eQTL 9.89e-01 0.00184 0.136 0.891 B_Memory LOneK1K
ENSG00000162607 USP1 271137 sc-eQTL 1.03e-01 0.224 0.137 0.891 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -815938 sc-eQTL 9.14e-01 -0.016 0.148 0.891 B_Memory LOneK1K
ENSG00000079739 PGM1 -885977 sc-eQTL 1.95e-01 -0.187 0.144 0.891 B_Naive LOneK1K
ENSG00000088035 ALG6 -660141 sc-eQTL 7.48e-01 -0.0479 0.149 0.891 B_Naive LOneK1K
ENSG00000116641 DOCK7 19048 sc-eQTL 9.08e-01 0.016 0.139 0.891 B_Naive LOneK1K
ENSG00000125703 ATG4C -76698 sc-eQTL 8.78e-01 0.0164 0.106 0.891 B_Naive LOneK1K
ENSG00000132849 PATJ 965028 sc-eQTL 3.80e-01 0.111 0.127 0.891 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -886287 sc-eQTL 6.09e-01 -0.0769 0.15 0.891 B_Naive LOneK1K
ENSG00000162604 TM2D1 982011 sc-eQTL 4.19e-01 -0.098 0.121 0.891 B_Naive LOneK1K
ENSG00000162607 USP1 271137 sc-eQTL 6.81e-01 -0.053 0.129 0.891 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -815938 sc-eQTL 3.58e-01 0.139 0.151 0.891 B_Naive LOneK1K
ENSG00000079739 PGM1 -885977 sc-eQTL 1.66e-01 -0.19 0.137 0.891 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -660141 sc-eQTL 1.33e-03 -0.422 0.13 0.891 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 19048 sc-eQTL 8.90e-01 0.0186 0.134 0.891 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -76698 sc-eQTL 9.63e-01 0.00428 0.0926 0.891 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -886287 sc-eQTL 8.44e-01 0.0269 0.137 0.891 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 982011 sc-eQTL 6.60e-01 0.0425 0.0965 0.891 CD14_Mono LOneK1K
ENSG00000162607 USP1 271137 sc-eQTL 3.55e-01 -0.108 0.117 0.891 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 512585 sc-eQTL 8.65e-01 0.0216 0.127 0.891 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -885977 sc-eQTL 4.23e-01 0.104 0.13 0.89 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -660141 sc-eQTL 2.48e-01 0.171 0.147 0.89 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 19048 sc-eQTL 2.82e-01 0.157 0.146 0.89 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -76698 sc-eQTL 2.57e-01 0.141 0.124 0.89 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -886287 sc-eQTL 2.20e-01 -0.177 0.144 0.89 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 982011 sc-eQTL 2.51e-01 -0.167 0.145 0.89 CD16_Mono LOneK1K
ENSG00000162607 USP1 271137 sc-eQTL 8.42e-01 -0.0271 0.136 0.89 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 512585 sc-eQTL 5.80e-01 -0.0513 0.0927 0.89 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -885977 sc-eQTL 9.28e-01 0.0101 0.112 0.89 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -660141 sc-eQTL 9.01e-02 0.227 0.133 0.89 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 19048 sc-eQTL 4.91e-01 -0.0829 0.12 0.89 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -76698 sc-eQTL 4.88e-02 0.236 0.119 0.89 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 965028 sc-eQTL 7.26e-01 -0.0454 0.129 0.89 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -886287 sc-eQTL 5.03e-02 -0.277 0.141 0.89 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 982011 sc-eQTL 6.81e-01 0.0487 0.119 0.89 NK_CD56dim LOneK1K
ENSG00000162607 USP1 271137 sc-eQTL 5.20e-01 0.0831 0.129 0.89 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -815938 sc-eQTL 9.54e-01 0.00916 0.157 0.89 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 19066 eQTL 0.0327 0.0739 0.0346 0.0 0.0 0.113
ENSG00000125703 ATG4C -76698 eQTL 0.00559 0.0728 0.0262 0.0 0.0 0.113
ENSG00000132855 ANGPTL3 109947 pQTL 0.00757 -0.122 0.0455 0.0 0.0 0.112
ENSG00000203965 EFCAB7 -815938 eQTL 2.35e-02 -0.085 0.0375 0.00106 0.0 0.113

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina