logo

Genes within 1Mb (chr1:62692211:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -901200 sc-eQTL 5.44e-01 -0.0764 0.126 0.891 B L1
ENSG00000088035 ALG6 -675364 sc-eQTL 6.32e-01 -0.0624 0.13 0.891 B L1
ENSG00000116641 DOCK7 3825 sc-eQTL 2.33e-01 -0.155 0.13 0.891 B L1
ENSG00000125703 ATG4C -91921 sc-eQTL 5.11e-01 0.0595 0.0905 0.891 B L1
ENSG00000132849 PATJ 949805 sc-eQTL 4.54e-01 0.0824 0.11 0.891 B L1
ENSG00000142856 ITGB3BP -901510 sc-eQTL 4.29e-01 -0.114 0.144 0.891 B L1
ENSG00000162604 TM2D1 966788 sc-eQTL 8.01e-01 -0.0277 0.11 0.891 B L1
ENSG00000162607 USP1 255914 sc-eQTL 6.80e-01 0.0516 0.125 0.891 B L1
ENSG00000203965 EFCAB7 -831161 sc-eQTL 6.87e-01 0.0595 0.148 0.891 B L1
ENSG00000079739 PGM1 -901200 sc-eQTL 5.44e-01 -0.0649 0.107 0.891 CD4T L1
ENSG00000088035 ALG6 -675364 sc-eQTL 5.11e-01 0.0777 0.118 0.891 CD4T L1
ENSG00000116641 DOCK7 3825 sc-eQTL 4.78e-02 -0.236 0.118 0.891 CD4T L1
ENSG00000125703 ATG4C -91921 sc-eQTL 6.13e-01 0.0489 0.0964 0.891 CD4T L1
ENSG00000132849 PATJ 949805 sc-eQTL 8.70e-02 0.134 0.0778 0.891 CD4T L1
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.07e-01 -0.0705 0.137 0.891 CD4T L1
ENSG00000162604 TM2D1 966788 sc-eQTL 7.69e-02 0.168 0.0944 0.891 CD4T L1
ENSG00000162607 USP1 255914 sc-eQTL 4.63e-01 0.0687 0.0935 0.891 CD4T L1
ENSG00000203965 EFCAB7 -831161 sc-eQTL 8.15e-01 -0.0289 0.123 0.891 CD4T L1
ENSG00000079739 PGM1 -901200 sc-eQTL 1.36e-01 -0.177 0.118 0.891 CD8T L1
ENSG00000088035 ALG6 -675364 sc-eQTL 6.62e-01 0.0574 0.131 0.891 CD8T L1
ENSG00000116641 DOCK7 3825 sc-eQTL 9.27e-01 0.0122 0.133 0.891 CD8T L1
ENSG00000125703 ATG4C -91921 sc-eQTL 3.80e-03 0.362 0.124 0.891 CD8T L1
ENSG00000132849 PATJ 949805 sc-eQTL 3.97e-01 0.0651 0.0767 0.891 CD8T L1
ENSG00000142856 ITGB3BP -901510 sc-eQTL 3.28e-01 -0.138 0.141 0.891 CD8T L1
ENSG00000162604 TM2D1 966788 sc-eQTL 4.19e-01 0.0932 0.115 0.891 CD8T L1
ENSG00000162607 USP1 255914 sc-eQTL 1.71e-01 0.15 0.109 0.891 CD8T L1
ENSG00000203965 EFCAB7 -831161 sc-eQTL 4.27e-01 0.112 0.14 0.891 CD8T L1
ENSG00000079739 PGM1 -901200 sc-eQTL 1.65e-01 -0.184 0.132 0.89 DC L1
ENSG00000088035 ALG6 -675364 sc-eQTL 7.93e-01 0.036 0.137 0.89 DC L1
ENSG00000116641 DOCK7 3825 sc-eQTL 6.08e-01 -0.0722 0.141 0.89 DC L1
ENSG00000125703 ATG4C -91921 sc-eQTL 3.13e-01 -0.111 0.11 0.89 DC L1
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.69e-01 0.0658 0.154 0.89 DC L1
ENSG00000162604 TM2D1 966788 sc-eQTL 7.06e-01 0.0485 0.128 0.89 DC L1
ENSG00000162607 USP1 255914 sc-eQTL 6.43e-01 0.0622 0.134 0.89 DC L1
ENSG00000203965 EFCAB7 -831161 sc-eQTL 6.18e-01 0.0669 0.134 0.89 DC L1
ENSG00000079739 PGM1 -901200 sc-eQTL 2.73e-01 -0.141 0.128 0.891 Mono L1
ENSG00000088035 ALG6 -675364 sc-eQTL 2.21e-02 -0.305 0.132 0.891 Mono L1
ENSG00000116641 DOCK7 3825 sc-eQTL 8.02e-01 0.0324 0.129 0.891 Mono L1
ENSG00000125703 ATG4C -91921 sc-eQTL 7.16e-01 0.0318 0.0874 0.891 Mono L1
ENSG00000142856 ITGB3BP -901510 sc-eQTL 5.99e-01 -0.0728 0.138 0.891 Mono L1
ENSG00000162604 TM2D1 966788 sc-eQTL 9.36e-01 -0.00785 0.097 0.891 Mono L1
ENSG00000162607 USP1 255914 sc-eQTL 7.83e-01 -0.0313 0.113 0.891 Mono L1
ENSG00000240563 L1TD1 497362 sc-eQTL 5.13e-01 -0.0693 0.106 0.891 Mono L1
ENSG00000079739 PGM1 -901200 sc-eQTL 8.25e-01 0.0245 0.11 0.891 NK L1
ENSG00000088035 ALG6 -675364 sc-eQTL 1.69e-01 0.178 0.129 0.891 NK L1
ENSG00000116641 DOCK7 3825 sc-eQTL 9.97e-02 -0.175 0.106 0.891 NK L1
ENSG00000125703 ATG4C -91921 sc-eQTL 3.55e-02 0.24 0.113 0.891 NK L1
ENSG00000132849 PATJ 949805 sc-eQTL 7.25e-01 -0.0395 0.112 0.891 NK L1
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.55e-02 -0.244 0.141 0.891 NK L1
ENSG00000162604 TM2D1 966788 sc-eQTL 5.82e-01 0.0633 0.115 0.891 NK L1
ENSG00000162607 USP1 255914 sc-eQTL 5.68e-01 0.0727 0.127 0.891 NK L1
ENSG00000203965 EFCAB7 -831161 sc-eQTL 9.04e-01 0.0186 0.154 0.891 NK L1
ENSG00000079739 PGM1 -901200 sc-eQTL 7.46e-02 -0.223 0.124 0.891 Other_T L1
ENSG00000088035 ALG6 -675364 sc-eQTL 3.99e-01 0.106 0.126 0.891 Other_T L1
ENSG00000116641 DOCK7 3825 sc-eQTL 8.15e-01 -0.0302 0.128 0.891 Other_T L1
ENSG00000125703 ATG4C -91921 sc-eQTL 6.41e-01 0.0519 0.111 0.891 Other_T L1
ENSG00000132849 PATJ 949805 sc-eQTL 4.72e-01 0.0745 0.103 0.891 Other_T L1
ENSG00000142856 ITGB3BP -901510 sc-eQTL 1.19e-01 -0.153 0.098 0.891 Other_T L1
ENSG00000162604 TM2D1 966788 sc-eQTL 9.41e-02 -0.203 0.121 0.891 Other_T L1
ENSG00000162607 USP1 255914 sc-eQTL 1.03e-01 0.139 0.0849 0.891 Other_T L1
ENSG00000203965 EFCAB7 -831161 sc-eQTL 6.01e-01 -0.0796 0.152 0.891 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -901200 sc-eQTL 4.74e-01 -0.122 0.169 0.893 B_Activated L2
ENSG00000088035 ALG6 -675364 sc-eQTL 8.23e-01 0.0365 0.163 0.893 B_Activated L2
ENSG00000116641 DOCK7 3825 sc-eQTL 2.96e-01 -0.158 0.151 0.893 B_Activated L2
ENSG00000125703 ATG4C -91921 sc-eQTL 6.15e-01 0.0801 0.159 0.893 B_Activated L2
ENSG00000132849 PATJ 949805 sc-eQTL 5.70e-01 0.0769 0.135 0.893 B_Activated L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.01e-01 -0.0393 0.156 0.893 B_Activated L2
ENSG00000162604 TM2D1 966788 sc-eQTL 8.09e-01 -0.0416 0.172 0.893 B_Activated L2
ENSG00000162607 USP1 255914 sc-eQTL 9.95e-01 0.000993 0.169 0.893 B_Activated L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 9.75e-01 -0.00457 0.147 0.893 B_Activated L2
ENSG00000079739 PGM1 -901200 sc-eQTL 9.02e-01 0.0183 0.149 0.891 B_Intermediate L2
ENSG00000088035 ALG6 -675364 sc-eQTL 8.36e-02 -0.261 0.15 0.891 B_Intermediate L2
ENSG00000116641 DOCK7 3825 sc-eQTL 4.78e-03 -0.404 0.142 0.891 B_Intermediate L2
ENSG00000125703 ATG4C -91921 sc-eQTL 9.17e-01 0.0127 0.122 0.891 B_Intermediate L2
ENSG00000132849 PATJ 949805 sc-eQTL 1.09e-01 0.212 0.132 0.891 B_Intermediate L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 5.39e-01 -0.0894 0.145 0.891 B_Intermediate L2
ENSG00000162604 TM2D1 966788 sc-eQTL 9.33e-01 -0.0117 0.139 0.891 B_Intermediate L2
ENSG00000162607 USP1 255914 sc-eQTL 4.99e-01 0.0983 0.145 0.891 B_Intermediate L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 5.85e-01 0.0789 0.144 0.891 B_Intermediate L2
ENSG00000079739 PGM1 -901200 sc-eQTL 9.07e-01 -0.0169 0.144 0.89 B_Memory L2
ENSG00000088035 ALG6 -675364 sc-eQTL 8.93e-01 0.0198 0.147 0.89 B_Memory L2
ENSG00000116641 DOCK7 3825 sc-eQTL 2.45e-01 -0.16 0.137 0.89 B_Memory L2
ENSG00000125703 ATG4C -91921 sc-eQTL 5.96e-01 0.0694 0.131 0.89 B_Memory L2
ENSG00000132849 PATJ 949805 sc-eQTL 6.73e-01 -0.0552 0.13 0.89 B_Memory L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 9.06e-01 0.0176 0.15 0.89 B_Memory L2
ENSG00000162604 TM2D1 966788 sc-eQTL 8.31e-01 0.0313 0.147 0.89 B_Memory L2
ENSG00000162607 USP1 255914 sc-eQTL 3.13e-01 0.152 0.15 0.89 B_Memory L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 2.20e-01 -0.182 0.148 0.89 B_Memory L2
ENSG00000079739 PGM1 -901200 sc-eQTL 3.04e-01 -0.153 0.148 0.891 B_Naive1 L2
ENSG00000088035 ALG6 -675364 sc-eQTL 3.08e-01 -0.152 0.149 0.891 B_Naive1 L2
ENSG00000116641 DOCK7 3825 sc-eQTL 8.35e-01 0.0298 0.143 0.891 B_Naive1 L2
ENSG00000125703 ATG4C -91921 sc-eQTL 6.72e-01 0.0466 0.11 0.891 B_Naive1 L2
ENSG00000132849 PATJ 949805 sc-eQTL 3.19e-01 0.141 0.141 0.891 B_Naive1 L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 7.46e-01 -0.0473 0.146 0.891 B_Naive1 L2
ENSG00000162604 TM2D1 966788 sc-eQTL 9.12e-01 0.0144 0.13 0.891 B_Naive1 L2
ENSG00000162607 USP1 255914 sc-eQTL 5.69e-01 -0.0732 0.128 0.891 B_Naive1 L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 3.79e-01 0.137 0.156 0.891 B_Naive1 L2
ENSG00000079739 PGM1 -901200 sc-eQTL 2.24e-01 -0.176 0.145 0.891 B_Naive2 L2
ENSG00000088035 ALG6 -675364 sc-eQTL 8.20e-01 0.0345 0.151 0.891 B_Naive2 L2
ENSG00000116641 DOCK7 3825 sc-eQTL 4.30e-01 0.115 0.145 0.891 B_Naive2 L2
ENSG00000125703 ATG4C -91921 sc-eQTL 3.23e-01 -0.138 0.14 0.891 B_Naive2 L2
ENSG00000132849 PATJ 949805 sc-eQTL 8.48e-01 0.0275 0.143 0.891 B_Naive2 L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 9.60e-01 -0.00756 0.152 0.891 B_Naive2 L2
ENSG00000162604 TM2D1 966788 sc-eQTL 2.83e-01 -0.156 0.145 0.891 B_Naive2 L2
ENSG00000162607 USP1 255914 sc-eQTL 6.40e-01 -0.0677 0.145 0.891 B_Naive2 L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 7.43e-01 0.0497 0.151 0.891 B_Naive2 L2
ENSG00000079739 PGM1 -901200 sc-eQTL 6.47e-01 -0.0683 0.149 0.891 CD4_CTL L2
ENSG00000088035 ALG6 -675364 sc-eQTL 8.20e-01 -0.0358 0.157 0.891 CD4_CTL L2
ENSG00000116641 DOCK7 3825 sc-eQTL 2.00e-01 0.176 0.137 0.891 CD4_CTL L2
ENSG00000125703 ATG4C -91921 sc-eQTL 8.27e-02 0.246 0.141 0.891 CD4_CTL L2
ENSG00000132849 PATJ 949805 sc-eQTL 2.44e-01 -0.133 0.114 0.891 CD4_CTL L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.77e-01 0.0237 0.152 0.891 CD4_CTL L2
ENSG00000162604 TM2D1 966788 sc-eQTL 1.96e-02 0.338 0.144 0.891 CD4_CTL L2
ENSG00000162607 USP1 255914 sc-eQTL 8.32e-01 0.0308 0.145 0.891 CD4_CTL L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 2.14e-01 -0.179 0.144 0.891 CD4_CTL L2
ENSG00000079739 PGM1 -901200 sc-eQTL 2.74e-01 -0.132 0.12 0.891 CD4_Naive L2
ENSG00000088035 ALG6 -675364 sc-eQTL 1.35e-02 0.321 0.129 0.891 CD4_Naive L2
ENSG00000116641 DOCK7 3825 sc-eQTL 3.58e-02 -0.269 0.127 0.891 CD4_Naive L2
ENSG00000125703 ATG4C -91921 sc-eQTL 9.79e-01 0.00306 0.114 0.891 CD4_Naive L2
ENSG00000132849 PATJ 949805 sc-eQTL 3.42e-02 0.168 0.0789 0.891 CD4_Naive L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.95e-01 -0.0545 0.139 0.891 CD4_Naive L2
ENSG00000162604 TM2D1 966788 sc-eQTL 1.60e-01 0.161 0.114 0.891 CD4_Naive L2
ENSG00000162607 USP1 255914 sc-eQTL 5.36e-01 0.0658 0.106 0.891 CD4_Naive L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 9.84e-01 0.0028 0.138 0.891 CD4_Naive L2
ENSG00000079739 PGM1 -901200 sc-eQTL 4.75e-01 0.0894 0.125 0.891 CD4_TCM L2
ENSG00000088035 ALG6 -675364 sc-eQTL 2.93e-02 -0.315 0.143 0.891 CD4_TCM L2
ENSG00000116641 DOCK7 3825 sc-eQTL 1.27e-01 -0.196 0.128 0.891 CD4_TCM L2
ENSG00000125703 ATG4C -91921 sc-eQTL 4.59e-01 0.0927 0.125 0.891 CD4_TCM L2
ENSG00000132849 PATJ 949805 sc-eQTL 6.29e-01 0.0486 0.1 0.891 CD4_TCM L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.78e-01 -0.0228 0.147 0.891 CD4_TCM L2
ENSG00000162604 TM2D1 966788 sc-eQTL 1.62e-01 0.164 0.117 0.891 CD4_TCM L2
ENSG00000162607 USP1 255914 sc-eQTL 7.39e-01 0.0403 0.121 0.891 CD4_TCM L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 7.23e-01 0.0506 0.143 0.891 CD4_TCM L2
ENSG00000079739 PGM1 -901200 sc-eQTL 9.86e-01 -0.00254 0.148 0.891 CD4_TEM L2
ENSG00000088035 ALG6 -675364 sc-eQTL 2.05e-01 -0.189 0.148 0.891 CD4_TEM L2
ENSG00000116641 DOCK7 3825 sc-eQTL 1.45e-01 -0.211 0.145 0.891 CD4_TEM L2
ENSG00000125703 ATG4C -91921 sc-eQTL 8.10e-01 0.0339 0.141 0.891 CD4_TEM L2
ENSG00000132849 PATJ 949805 sc-eQTL 2.00e-01 0.168 0.131 0.891 CD4_TEM L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.73e-01 -0.0615 0.146 0.891 CD4_TEM L2
ENSG00000162604 TM2D1 966788 sc-eQTL 4.53e-01 -0.104 0.138 0.891 CD4_TEM L2
ENSG00000162607 USP1 255914 sc-eQTL 5.50e-01 0.0826 0.138 0.891 CD4_TEM L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 5.20e-01 0.0971 0.151 0.891 CD4_TEM L2
ENSG00000079739 PGM1 -901200 sc-eQTL 2.39e-01 -0.157 0.133 0.891 CD8_CTL L2
ENSG00000088035 ALG6 -675364 sc-eQTL 6.80e-01 -0.0584 0.141 0.891 CD8_CTL L2
ENSG00000116641 DOCK7 3825 sc-eQTL 7.38e-01 0.0449 0.134 0.891 CD8_CTL L2
ENSG00000125703 ATG4C -91921 sc-eQTL 3.76e-02 0.296 0.142 0.891 CD8_CTL L2
ENSG00000132849 PATJ 949805 sc-eQTL 6.04e-01 -0.0702 0.135 0.891 CD8_CTL L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 2.71e-01 -0.163 0.148 0.891 CD8_CTL L2
ENSG00000162604 TM2D1 966788 sc-eQTL 4.53e-02 0.248 0.123 0.891 CD8_CTL L2
ENSG00000162607 USP1 255914 sc-eQTL 5.00e-01 0.0898 0.133 0.891 CD8_CTL L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 6.32e-01 0.073 0.152 0.891 CD8_CTL L2
ENSG00000079739 PGM1 -901200 sc-eQTL 5.51e-01 0.0824 0.138 0.891 CD8_Naive L2
ENSG00000088035 ALG6 -675364 sc-eQTL 3.41e-01 0.136 0.143 0.891 CD8_Naive L2
ENSG00000116641 DOCK7 3825 sc-eQTL 2.96e-01 -0.154 0.147 0.891 CD8_Naive L2
ENSG00000125703 ATG4C -91921 sc-eQTL 4.51e-02 0.283 0.141 0.891 CD8_Naive L2
ENSG00000132849 PATJ 949805 sc-eQTL 7.23e-01 0.0385 0.108 0.891 CD8_Naive L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.44e-01 -0.0664 0.144 0.891 CD8_Naive L2
ENSG00000162604 TM2D1 966788 sc-eQTL 1.62e-01 -0.185 0.132 0.891 CD8_Naive L2
ENSG00000162607 USP1 255914 sc-eQTL 5.21e-01 0.0779 0.121 0.891 CD8_Naive L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 8.39e-01 0.0276 0.135 0.891 CD8_Naive L2
ENSG00000079739 PGM1 -901200 sc-eQTL 2.19e-01 -0.186 0.151 0.891 CD8_TCM L2
ENSG00000088035 ALG6 -675364 sc-eQTL 7.25e-01 -0.0542 0.154 0.891 CD8_TCM L2
ENSG00000116641 DOCK7 3825 sc-eQTL 8.00e-01 -0.038 0.15 0.891 CD8_TCM L2
ENSG00000125703 ATG4C -91921 sc-eQTL 7.75e-01 -0.0439 0.153 0.891 CD8_TCM L2
ENSG00000132849 PATJ 949805 sc-eQTL 7.22e-01 -0.0503 0.141 0.891 CD8_TCM L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 4.05e-02 -0.304 0.147 0.891 CD8_TCM L2
ENSG00000162604 TM2D1 966788 sc-eQTL 3.21e-01 0.142 0.143 0.891 CD8_TCM L2
ENSG00000162607 USP1 255914 sc-eQTL 1.16e-01 0.225 0.143 0.891 CD8_TCM L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 2.61e-01 0.171 0.151 0.891 CD8_TCM L2
ENSG00000079739 PGM1 -901200 sc-eQTL 6.58e-01 0.0686 0.155 0.897 CD8_TEM L2
ENSG00000088035 ALG6 -675364 sc-eQTL 3.99e-01 0.131 0.155 0.897 CD8_TEM L2
ENSG00000116641 DOCK7 3825 sc-eQTL 7.35e-01 0.051 0.15 0.897 CD8_TEM L2
ENSG00000125703 ATG4C -91921 sc-eQTL 1.59e-01 0.204 0.144 0.897 CD8_TEM L2
ENSG00000132849 PATJ 949805 sc-eQTL 3.39e-01 0.14 0.146 0.897 CD8_TEM L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 2.47e-01 0.181 0.156 0.897 CD8_TEM L2
ENSG00000162604 TM2D1 966788 sc-eQTL 4.53e-01 0.112 0.149 0.897 CD8_TEM L2
ENSG00000162607 USP1 255914 sc-eQTL 5.84e-01 -0.082 0.149 0.897 CD8_TEM L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 4.61e-01 -0.112 0.152 0.897 CD8_TEM L2
ENSG00000079739 PGM1 -901200 sc-eQTL 1.17e-02 -0.369 0.145 0.892 MAIT L2
ENSG00000088035 ALG6 -675364 sc-eQTL 3.46e-01 0.137 0.145 0.892 MAIT L2
ENSG00000116641 DOCK7 3825 sc-eQTL 6.86e-01 0.0566 0.14 0.892 MAIT L2
ENSG00000125703 ATG4C -91921 sc-eQTL 6.98e-01 0.0572 0.147 0.892 MAIT L2
ENSG00000132849 PATJ 949805 sc-eQTL 1.62e-01 0.174 0.124 0.892 MAIT L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 1.86e-01 -0.195 0.147 0.892 MAIT L2
ENSG00000162604 TM2D1 966788 sc-eQTL 6.79e-02 -0.258 0.14 0.892 MAIT L2
ENSG00000162607 USP1 255914 sc-eQTL 8.98e-01 -0.0188 0.146 0.892 MAIT L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 3.50e-01 -0.142 0.152 0.892 MAIT L2
ENSG00000079739 PGM1 -901200 sc-eQTL 4.59e-01 -0.107 0.144 0.891 NK_CD56bright L2
ENSG00000088035 ALG6 -675364 sc-eQTL 8.42e-01 -0.0296 0.148 0.891 NK_CD56bright L2
ENSG00000116641 DOCK7 3825 sc-eQTL 2.17e-02 -0.293 0.127 0.891 NK_CD56bright L2
ENSG00000125703 ATG4C -91921 sc-eQTL 2.97e-01 0.15 0.143 0.891 NK_CD56bright L2
ENSG00000132849 PATJ 949805 sc-eQTL 7.73e-01 -0.0406 0.141 0.891 NK_CD56bright L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.22e-01 -0.0738 0.149 0.891 NK_CD56bright L2
ENSG00000162604 TM2D1 966788 sc-eQTL 5.17e-01 0.0927 0.143 0.891 NK_CD56bright L2
ENSG00000162607 USP1 255914 sc-eQTL 5.11e-01 -0.101 0.154 0.891 NK_CD56bright L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 6.84e-01 -0.06 0.147 0.891 NK_CD56bright L2
ENSG00000079739 PGM1 -901200 sc-eQTL 1.45e-01 -0.166 0.114 0.89 NK_CD56dim L2
ENSG00000088035 ALG6 -675364 sc-eQTL 9.88e-01 -0.00211 0.145 0.89 NK_CD56dim L2
ENSG00000116641 DOCK7 3825 sc-eQTL 8.86e-01 -0.0181 0.126 0.89 NK_CD56dim L2
ENSG00000125703 ATG4C -91921 sc-eQTL 4.47e-01 0.0976 0.128 0.89 NK_CD56dim L2
ENSG00000132849 PATJ 949805 sc-eQTL 3.95e-01 -0.118 0.139 0.89 NK_CD56dim L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 3.60e-02 -0.305 0.144 0.89 NK_CD56dim L2
ENSG00000162604 TM2D1 966788 sc-eQTL 3.34e-01 0.128 0.132 0.89 NK_CD56dim L2
ENSG00000162607 USP1 255914 sc-eQTL 5.49e-01 0.0848 0.141 0.89 NK_CD56dim L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 7.63e-01 0.0475 0.158 0.89 NK_CD56dim L2
ENSG00000079739 PGM1 -901200 sc-eQTL 1.34e-01 0.23 0.153 0.888 NK_HLA L2
ENSG00000088035 ALG6 -675364 sc-eQTL 4.43e-02 0.319 0.158 0.888 NK_HLA L2
ENSG00000116641 DOCK7 3825 sc-eQTL 5.45e-01 -0.0738 0.122 0.888 NK_HLA L2
ENSG00000125703 ATG4C -91921 sc-eQTL 1.95e-01 0.183 0.141 0.888 NK_HLA L2
ENSG00000132849 PATJ 949805 sc-eQTL 1.50e-01 -0.189 0.131 0.888 NK_HLA L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 2.19e-02 -0.339 0.147 0.888 NK_HLA L2
ENSG00000162604 TM2D1 966788 sc-eQTL 5.06e-01 -0.0995 0.149 0.888 NK_HLA L2
ENSG00000162607 USP1 255914 sc-eQTL 3.60e-01 0.142 0.155 0.888 NK_HLA L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 8.83e-01 -0.0208 0.142 0.888 NK_HLA L2
ENSG00000079739 PGM1 -901200 sc-eQTL 6.01e-01 0.0658 0.126 0.89 NK_cytokine L2
ENSG00000088035 ALG6 -675364 sc-eQTL 1.23e-02 0.353 0.14 0.89 NK_cytokine L2
ENSG00000116641 DOCK7 3825 sc-eQTL 2.48e-01 -0.152 0.131 0.89 NK_cytokine L2
ENSG00000125703 ATG4C -91921 sc-eQTL 1.18e-01 0.21 0.134 0.89 NK_cytokine L2
ENSG00000132849 PATJ 949805 sc-eQTL 5.35e-01 0.0882 0.142 0.89 NK_cytokine L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 4.18e-01 -0.113 0.139 0.89 NK_cytokine L2
ENSG00000162604 TM2D1 966788 sc-eQTL 6.88e-01 0.0559 0.139 0.89 NK_cytokine L2
ENSG00000162607 USP1 255914 sc-eQTL 5.48e-01 -0.0881 0.146 0.89 NK_cytokine L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 2.86e-01 0.158 0.148 0.89 NK_cytokine L2
ENSG00000079739 PGM1 -901200 sc-eQTL 5.03e-01 -0.123 0.184 0.9 PB L2
ENSG00000088035 ALG6 -675364 sc-eQTL 4.26e-01 0.154 0.193 0.9 PB L2
ENSG00000116641 DOCK7 3825 sc-eQTL 9.47e-01 0.0138 0.207 0.9 PB L2
ENSG00000125703 ATG4C -91921 sc-eQTL 4.01e-01 0.152 0.18 0.9 PB L2
ENSG00000132849 PATJ 949805 sc-eQTL 5.85e-01 -0.102 0.187 0.9 PB L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.23e-01 0.0404 0.18 0.9 PB L2
ENSG00000162604 TM2D1 966788 sc-eQTL 8.07e-02 0.316 0.179 0.9 PB L2
ENSG00000162607 USP1 255914 sc-eQTL 1.04e-01 0.291 0.177 0.9 PB L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 2.72e-01 -0.217 0.197 0.9 PB L2
ENSG00000079739 PGM1 -901200 sc-eQTL 8.55e-01 0.0245 0.134 0.889 Pro_T L2
ENSG00000088035 ALG6 -675364 sc-eQTL 1.82e-01 -0.182 0.136 0.889 Pro_T L2
ENSG00000116641 DOCK7 3825 sc-eQTL 1.95e-01 0.177 0.136 0.889 Pro_T L2
ENSG00000125703 ATG4C -91921 sc-eQTL 8.23e-01 0.0268 0.12 0.889 Pro_T L2
ENSG00000132849 PATJ 949805 sc-eQTL 1.87e-01 -0.173 0.13 0.889 Pro_T L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 9.33e-01 0.0101 0.12 0.889 Pro_T L2
ENSG00000162604 TM2D1 966788 sc-eQTL 3.35e-01 0.141 0.146 0.889 Pro_T L2
ENSG00000162607 USP1 255914 sc-eQTL 2.56e-01 0.0939 0.0825 0.889 Pro_T L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 8.94e-01 0.0187 0.14 0.889 Pro_T L2
ENSG00000079739 PGM1 -901200 sc-eQTL 8.83e-01 -0.0216 0.146 0.891 Treg L2
ENSG00000088035 ALG6 -675364 sc-eQTL 4.27e-01 -0.124 0.156 0.891 Treg L2
ENSG00000116641 DOCK7 3825 sc-eQTL 3.01e-01 -0.148 0.143 0.891 Treg L2
ENSG00000125703 ATG4C -91921 sc-eQTL 9.21e-01 0.0145 0.146 0.891 Treg L2
ENSG00000132849 PATJ 949805 sc-eQTL 4.68e-01 -0.0985 0.135 0.891 Treg L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 5.54e-01 0.0907 0.153 0.891 Treg L2
ENSG00000162604 TM2D1 966788 sc-eQTL 9.68e-01 0.00594 0.149 0.891 Treg L2
ENSG00000162607 USP1 255914 sc-eQTL 8.97e-01 -0.0192 0.148 0.891 Treg L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 1.94e-01 -0.19 0.146 0.891 Treg L2
ENSG00000079739 PGM1 -901200 sc-eQTL 1.40e-01 -0.211 0.142 0.885 cDC L2
ENSG00000088035 ALG6 -675364 sc-eQTL 4.97e-01 -0.0987 0.145 0.885 cDC L2
ENSG00000116641 DOCK7 3825 sc-eQTL 9.87e-01 -0.00234 0.142 0.885 cDC L2
ENSG00000125703 ATG4C -91921 sc-eQTL 6.06e-01 -0.0638 0.124 0.885 cDC L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.36e-01 0.0742 0.157 0.885 cDC L2
ENSG00000162604 TM2D1 966788 sc-eQTL 1.00e+00 8.4e-05 0.154 0.885 cDC L2
ENSG00000162607 USP1 255914 sc-eQTL 5.92e-01 -0.0749 0.139 0.885 cDC L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 2.26e-01 0.152 0.125 0.885 cDC L2
ENSG00000079739 PGM1 -901200 sc-eQTL 3.68e-01 -0.121 0.134 0.891 cMono_IL1B L2
ENSG00000088035 ALG6 -675364 sc-eQTL 7.36e-02 -0.24 0.134 0.891 cMono_IL1B L2
ENSG00000116641 DOCK7 3825 sc-eQTL 6.01e-01 0.0743 0.142 0.891 cMono_IL1B L2
ENSG00000125703 ATG4C -91921 sc-eQTL 8.09e-01 0.0242 0.0998 0.891 cMono_IL1B L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.88e-01 0.02 0.141 0.891 cMono_IL1B L2
ENSG00000162604 TM2D1 966788 sc-eQTL 2.61e-01 0.116 0.103 0.891 cMono_IL1B L2
ENSG00000162607 USP1 255914 sc-eQTL 4.93e-01 0.0856 0.125 0.891 cMono_IL1B L2
ENSG00000240563 L1TD1 497362 sc-eQTL 3.92e-01 -0.107 0.125 0.891 cMono_IL1B L2
ENSG00000079739 PGM1 -901200 sc-eQTL 2.58e-01 -0.169 0.149 0.891 cMono_S100A L2
ENSG00000088035 ALG6 -675364 sc-eQTL 1.61e-03 -0.473 0.148 0.891 cMono_S100A L2
ENSG00000116641 DOCK7 3825 sc-eQTL 5.05e-01 -0.0937 0.14 0.891 cMono_S100A L2
ENSG00000125703 ATG4C -91921 sc-eQTL 8.30e-01 0.0261 0.122 0.891 cMono_S100A L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.61e-01 0.024 0.137 0.891 cMono_S100A L2
ENSG00000162604 TM2D1 966788 sc-eQTL 3.62e-01 -0.113 0.124 0.891 cMono_S100A L2
ENSG00000162607 USP1 255914 sc-eQTL 1.74e-02 -0.334 0.139 0.891 cMono_S100A L2
ENSG00000240563 L1TD1 497362 sc-eQTL 1.93e-01 0.153 0.117 0.891 cMono_S100A L2
ENSG00000079739 PGM1 -901200 sc-eQTL 6.70e-01 -0.0691 0.162 0.888 gdT L2
ENSG00000088035 ALG6 -675364 sc-eQTL 2.80e-01 -0.186 0.172 0.888 gdT L2
ENSG00000116641 DOCK7 3825 sc-eQTL 4.87e-01 -0.118 0.169 0.888 gdT L2
ENSG00000125703 ATG4C -91921 sc-eQTL 3.65e-01 -0.146 0.161 0.888 gdT L2
ENSG00000132849 PATJ 949805 sc-eQTL 9.23e-01 -0.0153 0.158 0.888 gdT L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 7.65e-01 -0.0514 0.171 0.888 gdT L2
ENSG00000162604 TM2D1 966788 sc-eQTL 5.70e-01 0.0944 0.166 0.888 gdT L2
ENSG00000162607 USP1 255914 sc-eQTL 4.83e-01 0.114 0.162 0.888 gdT L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 4.63e-01 -0.124 0.168 0.888 gdT L2
ENSG00000079739 PGM1 -901200 sc-eQTL 5.03e-01 0.0999 0.149 0.891 intMono L2
ENSG00000088035 ALG6 -675364 sc-eQTL 1.39e-01 0.205 0.138 0.891 intMono L2
ENSG00000116641 DOCK7 3825 sc-eQTL 2.70e-01 0.157 0.141 0.891 intMono L2
ENSG00000125703 ATG4C -91921 sc-eQTL 1.37e-01 0.201 0.135 0.891 intMono L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 2.91e-01 -0.158 0.149 0.891 intMono L2
ENSG00000162604 TM2D1 966788 sc-eQTL 1.39e-02 -0.351 0.141 0.891 intMono L2
ENSG00000162607 USP1 255914 sc-eQTL 1.14e-01 -0.239 0.151 0.891 intMono L2
ENSG00000240563 L1TD1 497362 sc-eQTL 4.95e-01 0.0762 0.111 0.891 intMono L2
ENSG00000079739 PGM1 -901200 sc-eQTL 5.92e-01 0.0705 0.131 0.885 ncMono L2
ENSG00000088035 ALG6 -675364 sc-eQTL 6.50e-01 0.0655 0.144 0.885 ncMono L2
ENSG00000116641 DOCK7 3825 sc-eQTL 5.59e-01 0.083 0.142 0.885 ncMono L2
ENSG00000125703 ATG4C -91921 sc-eQTL 8.16e-01 -0.031 0.133 0.885 ncMono L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.57e-01 -0.025 0.139 0.885 ncMono L2
ENSG00000162604 TM2D1 966788 sc-eQTL 9.12e-01 -0.0158 0.143 0.885 ncMono L2
ENSG00000162607 USP1 255914 sc-eQTL 9.94e-01 -0.00111 0.142 0.885 ncMono L2
ENSG00000240563 L1TD1 497362 sc-eQTL 6.62e-01 -0.044 0.1 0.885 ncMono L2
ENSG00000079739 PGM1 -901200 sc-eQTL 8.32e-01 -0.033 0.155 0.876 pDC L2
ENSG00000088035 ALG6 -675364 sc-eQTL 1.35e-01 0.226 0.15 0.876 pDC L2
ENSG00000116641 DOCK7 3825 sc-eQTL 5.75e-01 -0.0867 0.154 0.876 pDC L2
ENSG00000125703 ATG4C -91921 sc-eQTL 5.76e-01 -0.0774 0.138 0.876 pDC L2
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.16e-01 0.078 0.155 0.876 pDC L2
ENSG00000162604 TM2D1 966788 sc-eQTL 8.55e-01 0.0248 0.136 0.876 pDC L2
ENSG00000162607 USP1 255914 sc-eQTL 1.36e-01 0.236 0.157 0.876 pDC L2
ENSG00000203965 EFCAB7 -831161 sc-eQTL 9.03e-01 0.0168 0.138 0.876 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -901200 sc-eQTL 8.36e-01 -0.0288 0.139 0.891 B_Memory LOneK1K
ENSG00000088035 ALG6 -675364 sc-eQTL 1.59e-01 -0.216 0.153 0.891 B_Memory LOneK1K
ENSG00000116641 DOCK7 3825 sc-eQTL 2.48e-02 -0.298 0.132 0.891 B_Memory LOneK1K
ENSG00000125703 ATG4C -91921 sc-eQTL 6.45e-01 0.0498 0.108 0.891 B_Memory LOneK1K
ENSG00000132849 PATJ 949805 sc-eQTL 2.45e-01 0.139 0.119 0.891 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -901510 sc-eQTL 3.60e-01 -0.13 0.141 0.891 B_Memory LOneK1K
ENSG00000162604 TM2D1 966788 sc-eQTL 9.89e-01 0.00184 0.136 0.891 B_Memory LOneK1K
ENSG00000162607 USP1 255914 sc-eQTL 1.03e-01 0.224 0.137 0.891 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -831161 sc-eQTL 9.14e-01 -0.016 0.148 0.891 B_Memory LOneK1K
ENSG00000079739 PGM1 -901200 sc-eQTL 1.95e-01 -0.187 0.144 0.891 B_Naive LOneK1K
ENSG00000088035 ALG6 -675364 sc-eQTL 7.48e-01 -0.0479 0.149 0.891 B_Naive LOneK1K
ENSG00000116641 DOCK7 3825 sc-eQTL 9.08e-01 0.016 0.139 0.891 B_Naive LOneK1K
ENSG00000125703 ATG4C -91921 sc-eQTL 8.78e-01 0.0164 0.106 0.891 B_Naive LOneK1K
ENSG00000132849 PATJ 949805 sc-eQTL 3.80e-01 0.111 0.127 0.891 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -901510 sc-eQTL 6.09e-01 -0.0769 0.15 0.891 B_Naive LOneK1K
ENSG00000162604 TM2D1 966788 sc-eQTL 4.19e-01 -0.098 0.121 0.891 B_Naive LOneK1K
ENSG00000162607 USP1 255914 sc-eQTL 6.81e-01 -0.053 0.129 0.891 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -831161 sc-eQTL 3.58e-01 0.139 0.151 0.891 B_Naive LOneK1K
ENSG00000079739 PGM1 -901200 sc-eQTL 1.66e-01 -0.19 0.137 0.891 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -675364 sc-eQTL 1.33e-03 -0.422 0.13 0.891 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 3825 sc-eQTL 8.90e-01 0.0186 0.134 0.891 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -91921 sc-eQTL 9.63e-01 0.00428 0.0926 0.891 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -901510 sc-eQTL 8.44e-01 0.0269 0.137 0.891 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 966788 sc-eQTL 6.60e-01 0.0425 0.0965 0.891 CD14_Mono LOneK1K
ENSG00000162607 USP1 255914 sc-eQTL 3.55e-01 -0.108 0.117 0.891 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 497362 sc-eQTL 8.65e-01 0.0216 0.127 0.891 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -901200 sc-eQTL 4.23e-01 0.104 0.13 0.89 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -675364 sc-eQTL 2.48e-01 0.171 0.147 0.89 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 3825 sc-eQTL 2.82e-01 0.157 0.146 0.89 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -91921 sc-eQTL 2.57e-01 0.141 0.124 0.89 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -901510 sc-eQTL 2.20e-01 -0.177 0.144 0.89 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 966788 sc-eQTL 2.51e-01 -0.167 0.145 0.89 CD16_Mono LOneK1K
ENSG00000162607 USP1 255914 sc-eQTL 8.42e-01 -0.0271 0.136 0.89 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 497362 sc-eQTL 5.80e-01 -0.0513 0.0927 0.89 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -901200 sc-eQTL 9.28e-01 0.0101 0.112 0.89 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -675364 sc-eQTL 9.01e-02 0.227 0.133 0.89 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 3825 sc-eQTL 4.91e-01 -0.0829 0.12 0.89 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -91921 sc-eQTL 4.88e-02 0.236 0.119 0.89 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 949805 sc-eQTL 7.26e-01 -0.0454 0.129 0.89 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -901510 sc-eQTL 5.03e-02 -0.277 0.141 0.89 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 966788 sc-eQTL 6.81e-01 0.0487 0.119 0.89 NK_CD56dim LOneK1K
ENSG00000162607 USP1 255914 sc-eQTL 5.20e-01 0.0831 0.129 0.89 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -831161 sc-eQTL 9.54e-01 0.00916 0.157 0.89 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 3843 eQTL 0.0295 0.0754 0.0346 0.0 0.0 0.113
ENSG00000125703 ATG4C -91921 eQTL 0.00702 0.0708 0.0262 0.0 0.0 0.113
ENSG00000132855 ANGPTL3 94724 pQTL 0.00588 -0.126 0.0455 0.0 0.0 0.112
ENSG00000203965 EFCAB7 -831161 eQTL 1.41e-02 -0.0922 0.0375 0.00131 0.0 0.113

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina