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Genes within 1Mb (chr1:62580907:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -786668 sc-eQTL 9.83e-01 -0.002 0.0963 0.788 B L1
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.21e-01 0.149 0.0957 0.788 B L1
ENSG00000125703 ATG4C -203225 sc-eQTL 8.29e-01 -0.0145 0.0669 0.788 B L1
ENSG00000132849 PATJ 838501 sc-eQTL 7.45e-01 -0.0265 0.0812 0.788 B L1
ENSG00000162604 TM2D1 855484 sc-eQTL 1.06e-01 -0.131 0.0806 0.788 B L1
ENSG00000162607 USP1 144610 sc-eQTL 5.01e-01 -0.0622 0.0923 0.788 B L1
ENSG00000203965 EFCAB7 -942465 sc-eQTL 7.72e-01 0.0316 0.109 0.788 B L1
ENSG00000088035 ALG6 -786668 sc-eQTL 8.59e-01 0.0156 0.0876 0.788 CD4T L1
ENSG00000116641 DOCK7 -107479 sc-eQTL 4.50e-01 0.067 0.0886 0.788 CD4T L1
ENSG00000125703 ATG4C -203225 sc-eQTL 9.75e-01 0.00221 0.0716 0.788 CD4T L1
ENSG00000132849 PATJ 838501 sc-eQTL 3.80e-01 0.051 0.058 0.788 CD4T L1
ENSG00000162604 TM2D1 855484 sc-eQTL 1.36e-01 0.105 0.0703 0.788 CD4T L1
ENSG00000162607 USP1 144610 sc-eQTL 7.97e-01 -0.0179 0.0695 0.788 CD4T L1
ENSG00000203965 EFCAB7 -942465 sc-eQTL 2.50e-01 -0.105 0.091 0.788 CD4T L1
ENSG00000088035 ALG6 -786668 sc-eQTL 9.93e-01 -0.000835 0.0971 0.788 CD8T L1
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.62e-01 0.138 0.0979 0.788 CD8T L1
ENSG00000125703 ATG4C -203225 sc-eQTL 3.03e-01 0.0962 0.0932 0.788 CD8T L1
ENSG00000132849 PATJ 838501 sc-eQTL 4.83e-02 0.112 0.0565 0.788 CD8T L1
ENSG00000162604 TM2D1 855484 sc-eQTL 6.45e-01 0.0394 0.0855 0.788 CD8T L1
ENSG00000162607 USP1 144610 sc-eQTL 9.48e-01 0.00532 0.0814 0.788 CD8T L1
ENSG00000203965 EFCAB7 -942465 sc-eQTL 7.95e-01 -0.0271 0.104 0.788 CD8T L1
ENSG00000088035 ALG6 -786668 sc-eQTL 9.85e-01 0.00192 0.0998 0.788 DC L1
ENSG00000116641 DOCK7 -107479 sc-eQTL 6.59e-01 0.0452 0.102 0.788 DC L1
ENSG00000125703 ATG4C -203225 sc-eQTL 3.49e-02 0.168 0.0791 0.788 DC L1
ENSG00000162604 TM2D1 855484 sc-eQTL 9.32e-01 -0.00794 0.0932 0.788 DC L1
ENSG00000162607 USP1 144610 sc-eQTL 3.44e-01 0.0924 0.0974 0.788 DC L1
ENSG00000203965 EFCAB7 -942465 sc-eQTL 3.74e-01 0.0866 0.0972 0.788 DC L1
ENSG00000088035 ALG6 -786668 sc-eQTL 5.25e-02 -0.192 0.0985 0.788 Mono L1
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.51e-02 0.232 0.0948 0.788 Mono L1
ENSG00000125703 ATG4C -203225 sc-eQTL 4.91e-01 0.0448 0.0649 0.788 Mono L1
ENSG00000162604 TM2D1 855484 sc-eQTL 1.18e-02 -0.18 0.071 0.788 Mono L1
ENSG00000162607 USP1 144610 sc-eQTL 6.78e-01 0.035 0.0843 0.788 Mono L1
ENSG00000240563 L1TD1 386058 sc-eQTL 4.64e-01 -0.0577 0.0786 0.788 Mono L1
ENSG00000088035 ALG6 -786668 sc-eQTL 8.76e-01 0.0148 0.095 0.79 NK L1
ENSG00000116641 DOCK7 -107479 sc-eQTL 9.46e-03 0.202 0.077 0.79 NK L1
ENSG00000125703 ATG4C -203225 sc-eQTL 8.77e-01 0.013 0.084 0.79 NK L1
ENSG00000132849 PATJ 838501 sc-eQTL 2.96e-02 -0.178 0.0815 0.79 NK L1
ENSG00000162604 TM2D1 855484 sc-eQTL 4.30e-01 0.0667 0.0842 0.79 NK L1
ENSG00000162607 USP1 144610 sc-eQTL 5.48e-01 -0.0562 0.0933 0.79 NK L1
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.81e-01 0.0171 0.113 0.79 NK L1
ENSG00000088035 ALG6 -786668 sc-eQTL 2.77e-01 0.101 0.0929 0.788 Other_T L1
ENSG00000116641 DOCK7 -107479 sc-eQTL 5.46e-01 0.0574 0.095 0.788 Other_T L1
ENSG00000125703 ATG4C -203225 sc-eQTL 7.55e-01 0.0257 0.0823 0.788 Other_T L1
ENSG00000132849 PATJ 838501 sc-eQTL 2.38e-01 0.0904 0.0764 0.788 Other_T L1
ENSG00000162604 TM2D1 855484 sc-eQTL 1.96e-01 -0.116 0.0895 0.788 Other_T L1
ENSG00000162607 USP1 144610 sc-eQTL 7.74e-01 -0.0182 0.0632 0.788 Other_T L1
ENSG00000203965 EFCAB7 -942465 sc-eQTL 3.35e-01 0.109 0.112 0.788 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -786668 sc-eQTL 4.63e-01 0.0884 0.12 0.793 B_Activated L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 7.22e-01 -0.04 0.112 0.793 B_Activated L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.35e-01 0.114 0.118 0.793 B_Activated L2
ENSG00000132849 PATJ 838501 sc-eQTL 1.82e-02 0.235 0.0986 0.793 B_Activated L2
ENSG00000162604 TM2D1 855484 sc-eQTL 1.02e-01 0.208 0.126 0.793 B_Activated L2
ENSG00000162607 USP1 144610 sc-eQTL 1.52e-01 0.179 0.124 0.793 B_Activated L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 9.33e-01 -0.00915 0.109 0.793 B_Activated L2
ENSG00000088035 ALG6 -786668 sc-eQTL 5.34e-01 -0.0706 0.113 0.788 B_Intermediate L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 4.69e-01 0.0785 0.108 0.788 B_Intermediate L2
ENSG00000125703 ATG4C -203225 sc-eQTL 4.66e-01 0.0669 0.0916 0.788 B_Intermediate L2
ENSG00000132849 PATJ 838501 sc-eQTL 8.41e-01 -0.0199 0.0993 0.788 B_Intermediate L2
ENSG00000162604 TM2D1 855484 sc-eQTL 6.99e-01 -0.0404 0.104 0.788 B_Intermediate L2
ENSG00000162607 USP1 144610 sc-eQTL 9.38e-01 0.00845 0.109 0.788 B_Intermediate L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 6.91e-01 -0.0431 0.108 0.788 B_Intermediate L2
ENSG00000088035 ALG6 -786668 sc-eQTL 8.64e-01 0.019 0.111 0.789 B_Memory L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.78e-01 0.14 0.104 0.789 B_Memory L2
ENSG00000125703 ATG4C -203225 sc-eQTL 9.51e-01 -0.00611 0.0989 0.789 B_Memory L2
ENSG00000132849 PATJ 838501 sc-eQTL 2.72e-02 -0.217 0.0976 0.789 B_Memory L2
ENSG00000162604 TM2D1 855484 sc-eQTL 6.05e-02 -0.208 0.11 0.789 B_Memory L2
ENSG00000162607 USP1 144610 sc-eQTL 4.68e-01 0.0828 0.114 0.789 B_Memory L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 4.11e-01 0.0923 0.112 0.789 B_Memory L2
ENSG00000088035 ALG6 -786668 sc-eQTL 6.34e-01 -0.0528 0.111 0.788 B_Naive1 L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 9.67e-01 0.00441 0.106 0.788 B_Naive1 L2
ENSG00000125703 ATG4C -203225 sc-eQTL 7.95e-01 0.0213 0.0816 0.788 B_Naive1 L2
ENSG00000132849 PATJ 838501 sc-eQTL 6.45e-01 0.0485 0.105 0.788 B_Naive1 L2
ENSG00000162604 TM2D1 855484 sc-eQTL 9.29e-01 0.00858 0.0965 0.788 B_Naive1 L2
ENSG00000162607 USP1 144610 sc-eQTL 2.19e-01 -0.117 0.0949 0.788 B_Naive1 L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 9.79e-01 0.00301 0.116 0.788 B_Naive1 L2
ENSG00000088035 ALG6 -786668 sc-eQTL 4.21e-01 -0.0914 0.113 0.79 B_Naive2 L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 4.82e-01 0.0767 0.109 0.79 B_Naive2 L2
ENSG00000125703 ATG4C -203225 sc-eQTL 1.36e-01 -0.156 0.104 0.79 B_Naive2 L2
ENSG00000132849 PATJ 838501 sc-eQTL 9.50e-01 -0.00679 0.107 0.79 B_Naive2 L2
ENSG00000162604 TM2D1 855484 sc-eQTL 5.20e-03 -0.301 0.107 0.79 B_Naive2 L2
ENSG00000162607 USP1 144610 sc-eQTL 2.94e-01 -0.114 0.108 0.79 B_Naive2 L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.36e-01 0.0235 0.113 0.79 B_Naive2 L2
ENSG00000088035 ALG6 -786668 sc-eQTL 4.16e-01 -0.0941 0.116 0.789 CD4_CTL L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.87e-01 0.133 0.101 0.789 CD4_CTL L2
ENSG00000125703 ATG4C -203225 sc-eQTL 6.39e-01 0.0491 0.105 0.789 CD4_CTL L2
ENSG00000132849 PATJ 838501 sc-eQTL 1.36e-01 -0.125 0.0834 0.789 CD4_CTL L2
ENSG00000162604 TM2D1 855484 sc-eQTL 5.97e-01 0.0568 0.107 0.789 CD4_CTL L2
ENSG00000162607 USP1 144610 sc-eQTL 3.85e-01 0.0926 0.106 0.789 CD4_CTL L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 2.57e-01 -0.121 0.106 0.789 CD4_CTL L2
ENSG00000088035 ALG6 -786668 sc-eQTL 2.53e-01 0.11 0.0961 0.788 CD4_Naive L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 8.31e-01 -0.0202 0.0947 0.788 CD4_Naive L2
ENSG00000125703 ATG4C -203225 sc-eQTL 6.78e-01 0.0349 0.0837 0.788 CD4_Naive L2
ENSG00000132849 PATJ 838501 sc-eQTL 8.37e-01 0.0121 0.0588 0.788 CD4_Naive L2
ENSG00000162604 TM2D1 855484 sc-eQTL 7.83e-02 0.149 0.084 0.788 CD4_Naive L2
ENSG00000162607 USP1 144610 sc-eQTL 5.93e-01 -0.0418 0.0781 0.788 CD4_Naive L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 3.16e-01 -0.102 0.101 0.788 CD4_Naive L2
ENSG00000088035 ALG6 -786668 sc-eQTL 7.79e-02 -0.189 0.107 0.788 CD4_TCM L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 2.63e-01 0.107 0.095 0.788 CD4_TCM L2
ENSG00000125703 ATG4C -203225 sc-eQTL 9.09e-01 0.0106 0.0928 0.788 CD4_TCM L2
ENSG00000132849 PATJ 838501 sc-eQTL 1.38e-01 0.11 0.0741 0.788 CD4_TCM L2
ENSG00000162604 TM2D1 855484 sc-eQTL 1.81e-01 0.116 0.0865 0.788 CD4_TCM L2
ENSG00000162607 USP1 144610 sc-eQTL 7.17e-01 -0.0325 0.0896 0.788 CD4_TCM L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 7.18e-01 0.0382 0.106 0.788 CD4_TCM L2
ENSG00000088035 ALG6 -786668 sc-eQTL 9.15e-01 -0.012 0.111 0.788 CD4_TEM L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 8.17e-01 -0.0252 0.109 0.788 CD4_TEM L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.48e-01 -0.099 0.105 0.788 CD4_TEM L2
ENSG00000132849 PATJ 838501 sc-eQTL 7.94e-01 0.0257 0.0984 0.788 CD4_TEM L2
ENSG00000162604 TM2D1 855484 sc-eQTL 1.80e-01 0.139 0.103 0.788 CD4_TEM L2
ENSG00000162607 USP1 144610 sc-eQTL 2.14e-01 0.128 0.103 0.788 CD4_TEM L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 7.40e-01 -0.0375 0.113 0.788 CD4_TEM L2
ENSG00000088035 ALG6 -786668 sc-eQTL 4.85e-01 0.0749 0.107 0.788 CD8_CTL L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 9.76e-02 0.168 0.101 0.788 CD8_CTL L2
ENSG00000125703 ATG4C -203225 sc-eQTL 2.32e-02 0.244 0.107 0.788 CD8_CTL L2
ENSG00000132849 PATJ 838501 sc-eQTL 2.54e-01 0.117 0.102 0.788 CD8_CTL L2
ENSG00000162604 TM2D1 855484 sc-eQTL 8.07e-01 0.023 0.0941 0.788 CD8_CTL L2
ENSG00000162607 USP1 144610 sc-eQTL 5.65e-01 -0.058 0.101 0.788 CD8_CTL L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 5.44e-01 -0.07 0.115 0.788 CD8_CTL L2
ENSG00000088035 ALG6 -786668 sc-eQTL 9.81e-01 -0.00255 0.105 0.788 CD8_Naive L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.21e-01 -0.167 0.108 0.788 CD8_Naive L2
ENSG00000125703 ATG4C -203225 sc-eQTL 6.36e-01 0.0491 0.104 0.788 CD8_Naive L2
ENSG00000132849 PATJ 838501 sc-eQTL 7.65e-02 0.14 0.0788 0.788 CD8_Naive L2
ENSG00000162604 TM2D1 855484 sc-eQTL 9.52e-01 0.0058 0.097 0.788 CD8_Naive L2
ENSG00000162607 USP1 144610 sc-eQTL 7.90e-01 0.0237 0.0889 0.788 CD8_Naive L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.36e-01 0.0206 0.0991 0.788 CD8_Naive L2
ENSG00000088035 ALG6 -786668 sc-eQTL 9.04e-01 0.0139 0.115 0.787 CD8_TCM L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 2.60e-01 0.127 0.112 0.787 CD8_TCM L2
ENSG00000125703 ATG4C -203225 sc-eQTL 5.42e-01 -0.0703 0.115 0.787 CD8_TCM L2
ENSG00000132849 PATJ 838501 sc-eQTL 6.48e-01 -0.0485 0.106 0.787 CD8_TCM L2
ENSG00000162604 TM2D1 855484 sc-eQTL 3.86e-02 0.222 0.107 0.787 CD8_TCM L2
ENSG00000162607 USP1 144610 sc-eQTL 7.68e-01 0.0318 0.108 0.787 CD8_TCM L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.85e-01 -0.0165 0.114 0.787 CD8_TCM L2
ENSG00000088035 ALG6 -786668 sc-eQTL 1.33e-01 0.176 0.116 0.79 CD8_TEM L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 4.98e-01 -0.0769 0.113 0.79 CD8_TEM L2
ENSG00000125703 ATG4C -203225 sc-eQTL 5.20e-01 0.0702 0.109 0.79 CD8_TEM L2
ENSG00000132849 PATJ 838501 sc-eQTL 1.49e-01 0.159 0.11 0.79 CD8_TEM L2
ENSG00000162604 TM2D1 855484 sc-eQTL 7.89e-01 0.0301 0.112 0.79 CD8_TEM L2
ENSG00000162607 USP1 144610 sc-eQTL 4.16e-01 0.0916 0.112 0.79 CD8_TEM L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 3.41e-01 0.109 0.114 0.79 CD8_TEM L2
ENSG00000088035 ALG6 -786668 sc-eQTL 7.48e-01 0.0338 0.105 0.788 MAIT L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 5.95e-01 0.0536 0.101 0.788 MAIT L2
ENSG00000125703 ATG4C -203225 sc-eQTL 6.02e-01 0.0554 0.106 0.788 MAIT L2
ENSG00000132849 PATJ 838501 sc-eQTL 3.38e-01 0.086 0.0896 0.788 MAIT L2
ENSG00000162604 TM2D1 855484 sc-eQTL 5.99e-01 -0.0537 0.102 0.788 MAIT L2
ENSG00000162607 USP1 144610 sc-eQTL 9.88e-01 -0.00159 0.106 0.788 MAIT L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 2.27e-01 0.132 0.109 0.788 MAIT L2
ENSG00000088035 ALG6 -786668 sc-eQTL 9.76e-01 -0.00329 0.111 0.791 NK_CD56bright L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 3.97e-01 -0.0811 0.0957 0.791 NK_CD56bright L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.29e-01 -0.104 0.107 0.791 NK_CD56bright L2
ENSG00000132849 PATJ 838501 sc-eQTL 1.24e-01 -0.161 0.104 0.791 NK_CD56bright L2
ENSG00000162604 TM2D1 855484 sc-eQTL 7.25e-01 0.0375 0.107 0.791 NK_CD56bright L2
ENSG00000162607 USP1 144610 sc-eQTL 4.25e-01 0.0918 0.115 0.791 NK_CD56bright L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 1.47e-01 -0.159 0.109 0.791 NK_CD56bright L2
ENSG00000088035 ALG6 -786668 sc-eQTL 9.78e-01 -0.00301 0.107 0.791 NK_CD56dim L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 3.65e-03 0.269 0.0916 0.791 NK_CD56dim L2
ENSG00000125703 ATG4C -203225 sc-eQTL 4.03e-01 -0.0795 0.0948 0.791 NK_CD56dim L2
ENSG00000132849 PATJ 838501 sc-eQTL 1.15e-03 -0.331 0.1 0.791 NK_CD56dim L2
ENSG00000162604 TM2D1 855484 sc-eQTL 8.74e-01 0.0155 0.0978 0.791 NK_CD56dim L2
ENSG00000162607 USP1 144610 sc-eQTL 9.75e-01 -0.00333 0.105 0.791 NK_CD56dim L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 7.26e-01 0.041 0.117 0.791 NK_CD56dim L2
ENSG00000088035 ALG6 -786668 sc-eQTL 6.44e-01 -0.0548 0.118 0.788 NK_HLA L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 5.25e-01 0.0575 0.0904 0.788 NK_HLA L2
ENSG00000125703 ATG4C -203225 sc-eQTL 7.28e-01 0.0366 0.105 0.788 NK_HLA L2
ENSG00000132849 PATJ 838501 sc-eQTL 2.13e-01 -0.122 0.0972 0.788 NK_HLA L2
ENSG00000162604 TM2D1 855484 sc-eQTL 5.80e-01 0.0614 0.111 0.788 NK_HLA L2
ENSG00000162607 USP1 144610 sc-eQTL 5.55e-01 0.0683 0.115 0.788 NK_HLA L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 2.84e-01 0.113 0.105 0.788 NK_HLA L2
ENSG00000088035 ALG6 -786668 sc-eQTL 4.19e-01 0.0842 0.104 0.791 NK_cytokine L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.90e-04 0.354 0.0933 0.791 NK_cytokine L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.71e-01 0.0882 0.0985 0.791 NK_cytokine L2
ENSG00000132849 PATJ 838501 sc-eQTL 3.80e-01 0.0914 0.104 0.791 NK_cytokine L2
ENSG00000162604 TM2D1 855484 sc-eQTL 4.54e-01 0.0762 0.102 0.791 NK_cytokine L2
ENSG00000162607 USP1 144610 sc-eQTL 9.72e-02 -0.178 0.107 0.791 NK_cytokine L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 2.26e-01 0.132 0.108 0.791 NK_cytokine L2
ENSG00000088035 ALG6 -786668 sc-eQTL 7.10e-01 0.0494 0.132 0.767 PB L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 5.80e-01 0.0784 0.141 0.767 PB L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.22e-01 -0.122 0.123 0.767 PB L2
ENSG00000132849 PATJ 838501 sc-eQTL 2.03e-01 -0.163 0.127 0.767 PB L2
ENSG00000162604 TM2D1 855484 sc-eQTL 3.93e-01 -0.106 0.124 0.767 PB L2
ENSG00000162607 USP1 144610 sc-eQTL 9.52e-01 0.00745 0.123 0.767 PB L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.20e-01 0.0308 0.135 0.767 PB L2
ENSG00000088035 ALG6 -786668 sc-eQTL 3.94e-01 0.089 0.104 0.789 Pro_T L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.26e-01 0.16 0.104 0.789 Pro_T L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.32e-01 -0.0889 0.0915 0.789 Pro_T L2
ENSG00000132849 PATJ 838501 sc-eQTL 7.54e-01 0.0314 0.1 0.789 Pro_T L2
ENSG00000162604 TM2D1 855484 sc-eQTL 7.58e-01 -0.0345 0.112 0.789 Pro_T L2
ENSG00000162607 USP1 144610 sc-eQTL 3.40e-01 0.0604 0.0631 0.789 Pro_T L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.35e-01 -0.0223 0.107 0.789 Pro_T L2
ENSG00000088035 ALG6 -786668 sc-eQTL 3.65e-01 0.102 0.112 0.788 Treg L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 2.63e-01 0.115 0.103 0.788 Treg L2
ENSG00000125703 ATG4C -203225 sc-eQTL 2.85e-01 0.113 0.105 0.788 Treg L2
ENSG00000132849 PATJ 838501 sc-eQTL 8.32e-01 0.0207 0.0976 0.788 Treg L2
ENSG00000162604 TM2D1 855484 sc-eQTL 8.44e-01 -0.0211 0.108 0.788 Treg L2
ENSG00000162607 USP1 144610 sc-eQTL 9.71e-01 0.00382 0.107 0.788 Treg L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 3.54e-01 -0.0977 0.105 0.788 Treg L2
ENSG00000088035 ALG6 -786668 sc-eQTL 3.45e-01 -0.104 0.11 0.798 cDC L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 2.57e-01 0.122 0.107 0.798 cDC L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.50e-01 0.0875 0.0934 0.798 cDC L2
ENSG00000162604 TM2D1 855484 sc-eQTL 6.85e-01 0.0476 0.117 0.798 cDC L2
ENSG00000162607 USP1 144610 sc-eQTL 5.97e-01 -0.0559 0.106 0.798 cDC L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.55e-01 -0.0174 0.0953 0.798 cDC L2
ENSG00000088035 ALG6 -786668 sc-eQTL 2.34e-01 -0.119 0.0998 0.788 cMono_IL1B L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 1.25e-02 0.262 0.104 0.788 cMono_IL1B L2
ENSG00000125703 ATG4C -203225 sc-eQTL 9.59e-01 0.00383 0.0742 0.788 cMono_IL1B L2
ENSG00000162604 TM2D1 855484 sc-eQTL 4.50e-01 -0.0579 0.0765 0.788 cMono_IL1B L2
ENSG00000162607 USP1 144610 sc-eQTL 6.48e-01 -0.0423 0.0927 0.788 cMono_IL1B L2
ENSG00000240563 L1TD1 386058 sc-eQTL 9.31e-01 0.00804 0.0932 0.788 cMono_IL1B L2
ENSG00000088035 ALG6 -786668 sc-eQTL 2.62e-02 -0.25 0.112 0.788 cMono_S100A L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 4.89e-02 0.206 0.104 0.788 cMono_S100A L2
ENSG00000125703 ATG4C -203225 sc-eQTL 8.69e-01 0.0149 0.0908 0.788 cMono_S100A L2
ENSG00000162604 TM2D1 855484 sc-eQTL 3.95e-02 -0.19 0.0917 0.788 cMono_S100A L2
ENSG00000162607 USP1 144610 sc-eQTL 2.16e-01 0.13 0.105 0.788 cMono_S100A L2
ENSG00000240563 L1TD1 386058 sc-eQTL 8.84e-01 -0.0128 0.0877 0.788 cMono_S100A L2
ENSG00000088035 ALG6 -786668 sc-eQTL 6.66e-01 -0.0578 0.134 0.785 gdT L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 9.62e-01 0.00621 0.131 0.785 gdT L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.41e-01 -0.119 0.125 0.785 gdT L2
ENSG00000132849 PATJ 838501 sc-eQTL 6.64e-01 0.0533 0.122 0.785 gdT L2
ENSG00000162604 TM2D1 855484 sc-eQTL 6.05e-01 -0.0668 0.129 0.785 gdT L2
ENSG00000162607 USP1 144610 sc-eQTL 3.12e-01 -0.127 0.125 0.785 gdT L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 4.14e-01 -0.107 0.131 0.785 gdT L2
ENSG00000088035 ALG6 -786668 sc-eQTL 7.04e-01 0.0404 0.106 0.793 intMono L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 8.55e-01 -0.0198 0.108 0.793 intMono L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.12e-01 0.105 0.103 0.793 intMono L2
ENSG00000162604 TM2D1 855484 sc-eQTL 5.99e-01 -0.0576 0.109 0.793 intMono L2
ENSG00000162607 USP1 144610 sc-eQTL 1.88e-01 -0.152 0.115 0.793 intMono L2
ENSG00000240563 L1TD1 386058 sc-eQTL 5.54e-01 0.0504 0.0851 0.793 intMono L2
ENSG00000088035 ALG6 -786668 sc-eQTL 4.20e-01 0.0892 0.11 0.794 ncMono L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 3.78e-01 0.0958 0.108 0.794 ncMono L2
ENSG00000125703 ATG4C -203225 sc-eQTL 3.56e-01 0.0938 0.101 0.794 ncMono L2
ENSG00000162604 TM2D1 855484 sc-eQTL 2.77e-01 -0.119 0.109 0.794 ncMono L2
ENSG00000162607 USP1 144610 sc-eQTL 2.53e-01 -0.124 0.108 0.794 ncMono L2
ENSG00000240563 L1TD1 386058 sc-eQTL 1.79e-01 -0.103 0.0766 0.794 ncMono L2
ENSG00000088035 ALG6 -786668 sc-eQTL 7.19e-01 0.0426 0.118 0.794 pDC L2
ENSG00000116641 DOCK7 -107479 sc-eQTL 8.18e-01 -0.0279 0.121 0.794 pDC L2
ENSG00000125703 ATG4C -203225 sc-eQTL 2.16e-01 0.134 0.108 0.794 pDC L2
ENSG00000162604 TM2D1 855484 sc-eQTL 5.49e-01 -0.0637 0.106 0.794 pDC L2
ENSG00000162607 USP1 144610 sc-eQTL 1.10e-01 0.198 0.123 0.794 pDC L2
ENSG00000203965 EFCAB7 -942465 sc-eQTL 3.79e-01 0.0948 0.107 0.794 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -786668 sc-eQTL 7.26e-01 -0.0402 0.114 0.788 B_Memory LOneK1K
ENSG00000116641 DOCK7 -107479 sc-eQTL 2.30e-01 0.119 0.099 0.788 B_Memory LOneK1K
ENSG00000125703 ATG4C -203225 sc-eQTL 5.13e-01 0.0526 0.0803 0.788 B_Memory LOneK1K
ENSG00000132849 PATJ 838501 sc-eQTL 4.27e-01 -0.0707 0.0889 0.788 B_Memory LOneK1K
ENSG00000162604 TM2D1 855484 sc-eQTL 4.82e-01 -0.0711 0.101 0.788 B_Memory LOneK1K
ENSG00000162607 USP1 144610 sc-eQTL 1.88e-01 0.135 0.102 0.788 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -942465 sc-eQTL 8.15e-01 0.0258 0.11 0.788 B_Memory LOneK1K
ENSG00000088035 ALG6 -786668 sc-eQTL 6.96e-01 -0.0432 0.11 0.788 B_Naive LOneK1K
ENSG00000116641 DOCK7 -107479 sc-eQTL 8.24e-01 0.0229 0.103 0.788 B_Naive LOneK1K
ENSG00000125703 ATG4C -203225 sc-eQTL 5.30e-01 -0.0494 0.0785 0.788 B_Naive LOneK1K
ENSG00000132849 PATJ 838501 sc-eQTL 6.55e-01 0.0421 0.094 0.788 B_Naive LOneK1K
ENSG00000162604 TM2D1 855484 sc-eQTL 1.23e-01 -0.138 0.0892 0.788 B_Naive LOneK1K
ENSG00000162607 USP1 144610 sc-eQTL 2.50e-01 -0.11 0.0952 0.788 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -942465 sc-eQTL 6.17e-01 0.056 0.112 0.788 B_Naive LOneK1K
ENSG00000088035 ALG6 -786668 sc-eQTL 1.88e-02 -0.232 0.0978 0.788 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -107479 sc-eQTL 6.57e-03 0.269 0.098 0.788 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -203225 sc-eQTL 7.74e-01 0.0198 0.0689 0.788 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 855484 sc-eQTL 2.62e-02 -0.159 0.0711 0.788 CD14_Mono LOneK1K
ENSG00000162607 USP1 144610 sc-eQTL 5.28e-01 0.055 0.0871 0.788 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 386058 sc-eQTL 7.83e-01 0.026 0.0945 0.788 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -786668 sc-eQTL 4.57e-01 0.082 0.11 0.791 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -107479 sc-eQTL 4.98e-01 0.0739 0.109 0.791 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -203225 sc-eQTL 2.48e-01 0.107 0.0926 0.791 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 855484 sc-eQTL 1.54e-01 -0.155 0.108 0.791 CD16_Mono LOneK1K
ENSG00000162607 USP1 144610 sc-eQTL 5.65e-02 -0.193 0.1 0.791 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 386058 sc-eQTL 4.37e-01 -0.0538 0.069 0.791 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -786668 sc-eQTL 7.91e-01 0.0263 0.0991 0.791 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -107479 sc-eQTL 4.45e-04 0.308 0.0862 0.791 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -203225 sc-eQTL 7.62e-01 0.0269 0.0886 0.791 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 838501 sc-eQTL 5.08e-02 -0.186 0.0946 0.791 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 855484 sc-eQTL 5.34e-01 0.0545 0.0875 0.791 NK_CD56dim LOneK1K
ENSG00000162607 USP1 144610 sc-eQTL 2.33e-01 -0.114 0.095 0.791 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -942465 sc-eQTL 3.94e-01 0.0988 0.116 0.791 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -107461 eQTL 6.28e-41 0.327 0.0233 0.0072 0.00742 0.222
ENSG00000125703 ATG4C -203225 eQTL 0.00757 0.0518 0.0194 0.0 0.0 0.222
ENSG00000132855 ANGPTL3 -16580 pQTL 3.59e-09 0.2 0.0337 0.0 0.0 0.222
ENSG00000162607 USP1 144610 eQTL 2.46e-12 0.103 0.0145 0.00506 0.00472 0.222

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 -107461 4.83e-06 5.16e-06 7.62e-07 3.51e-06 1.71e-06 1.55e-06 6.35e-06 1.19e-06 4.82e-06 2.9e-06 6.52e-06 2.94e-06 8.24e-06 1.7e-06 1.02e-06 3.93e-06 2.36e-06 3.84e-06 1.65e-06 1.61e-06 2.75e-06 5.51e-06 4.77e-06 1.91e-06 8.28e-06 2.08e-06 2.86e-06 1.73e-06 5.34e-06 5.28e-06 2.57e-06 5.57e-07 8.1e-07 2.53e-06 1.89e-06 1.59e-06 1.14e-06 5.07e-07 1.25e-06 7.31e-07 9.55e-07 6.52e-06 6.61e-07 1.67e-07 7.96e-07 9.77e-07 1.05e-06 6.26e-07 6.2e-07
ENSG00000162607 USP1 144610 4.24e-06 4.35e-06 8.35e-07 2.42e-06 1.43e-06 1.19e-06 2.91e-06 9.78e-07 4.15e-06 2.12e-06 4.34e-06 3.39e-06 6.47e-06 1.74e-06 1.42e-06 3.03e-06 2.06e-06 2.79e-06 1.44e-06 1.02e-06 2.63e-06 4.23e-06 3.43e-06 1.56e-06 4.97e-06 1.62e-06 2.56e-06 1.81e-06 4.38e-06 3.62e-06 2.02e-06 4.88e-07 6.1e-07 1.6e-06 2.03e-06 9e-07 9.46e-07 4.24e-07 9.49e-07 3.71e-07 6.7e-07 5.01e-06 3.82e-07 1.65e-07 6.11e-07 6.57e-07 9.78e-07 5.2e-07 3.6e-07