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Genes within 1Mb (chr1:62494904:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -872671 sc-eQTL 7.31e-01 0.0341 0.0993 0.801 B L1
ENSG00000116641 DOCK7 -193482 sc-eQTL 5.00e-02 0.194 0.0984 0.801 B L1
ENSG00000125703 ATG4C -289228 sc-eQTL 7.47e-01 -0.0223 0.069 0.801 B L1
ENSG00000132849 PATJ 752498 sc-eQTL 8.54e-01 -0.0154 0.0838 0.801 B L1
ENSG00000162604 TM2D1 769481 sc-eQTL 1.16e-01 -0.131 0.0832 0.801 B L1
ENSG00000162607 USP1 58607 sc-eQTL 7.82e-01 -0.0264 0.0954 0.801 B L1
ENSG00000088035 ALG6 -872671 sc-eQTL 7.96e-01 0.0235 0.0909 0.801 CD4T L1
ENSG00000116641 DOCK7 -193482 sc-eQTL 4.96e-01 0.0626 0.0919 0.801 CD4T L1
ENSG00000125703 ATG4C -289228 sc-eQTL 8.87e-01 -0.0106 0.0743 0.801 CD4T L1
ENSG00000132849 PATJ 752498 sc-eQTL 3.80e-01 0.0529 0.0602 0.801 CD4T L1
ENSG00000162604 TM2D1 769481 sc-eQTL 1.10e-01 0.117 0.0728 0.801 CD4T L1
ENSG00000162607 USP1 58607 sc-eQTL 9.94e-01 -0.000565 0.0721 0.801 CD4T L1
ENSG00000088035 ALG6 -872671 sc-eQTL 7.83e-01 -0.0277 0.101 0.801 CD8T L1
ENSG00000116641 DOCK7 -193482 sc-eQTL 1.10e-01 0.163 0.101 0.801 CD8T L1
ENSG00000125703 ATG4C -289228 sc-eQTL 2.19e-01 0.119 0.0965 0.801 CD8T L1
ENSG00000132849 PATJ 752498 sc-eQTL 5.65e-02 0.112 0.0585 0.801 CD8T L1
ENSG00000162604 TM2D1 769481 sc-eQTL 6.62e-01 0.0387 0.0886 0.801 CD8T L1
ENSG00000162607 USP1 58607 sc-eQTL 9.91e-01 0.000901 0.0844 0.801 CD8T L1
ENSG00000088035 ALG6 -872671 sc-eQTL 8.35e-01 0.0216 0.104 0.802 DC L1
ENSG00000116641 DOCK7 -193482 sc-eQTL 5.08e-01 0.0703 0.106 0.802 DC L1
ENSG00000125703 ATG4C -289228 sc-eQTL 1.63e-01 0.116 0.0827 0.802 DC L1
ENSG00000162604 TM2D1 769481 sc-eQTL 9.00e-01 -0.0122 0.0968 0.802 DC L1
ENSG00000162607 USP1 58607 sc-eQTL 3.70e-01 0.091 0.101 0.802 DC L1
ENSG00000088035 ALG6 -872671 sc-eQTL 6.35e-02 -0.191 0.102 0.801 Mono L1
ENSG00000116641 DOCK7 -193482 sc-eQTL 7.65e-02 0.176 0.099 0.801 Mono L1
ENSG00000125703 ATG4C -289228 sc-eQTL 4.44e-01 0.0516 0.0673 0.801 Mono L1
ENSG00000162604 TM2D1 769481 sc-eQTL 5.26e-02 -0.144 0.0741 0.801 Mono L1
ENSG00000162607 USP1 58607 sc-eQTL 8.45e-01 0.0171 0.0874 0.801 Mono L1
ENSG00000240563 L1TD1 300055 sc-eQTL 6.14e-01 -0.0412 0.0816 0.801 Mono L1
ENSG00000088035 ALG6 -872671 sc-eQTL 8.76e-01 0.0155 0.0991 0.803 NK L1
ENSG00000116641 DOCK7 -193482 sc-eQTL 1.87e-02 0.191 0.0805 0.803 NK L1
ENSG00000125703 ATG4C -289228 sc-eQTL 7.23e-01 0.0311 0.0876 0.803 NK L1
ENSG00000132849 PATJ 752498 sc-eQTL 3.90e-02 -0.177 0.085 0.803 NK L1
ENSG00000162604 TM2D1 769481 sc-eQTL 4.59e-01 0.0652 0.0878 0.803 NK L1
ENSG00000162607 USP1 58607 sc-eQTL 2.81e-01 -0.105 0.0971 0.803 NK L1
ENSG00000088035 ALG6 -872671 sc-eQTL 2.04e-01 0.122 0.096 0.801 Other_T L1
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.50e-01 0.092 0.0982 0.801 Other_T L1
ENSG00000125703 ATG4C -289228 sc-eQTL 3.51e-01 0.0795 0.085 0.801 Other_T L1
ENSG00000132849 PATJ 752498 sc-eQTL 3.84e-01 0.0691 0.0792 0.801 Other_T L1
ENSG00000162604 TM2D1 769481 sc-eQTL 2.64e-01 -0.104 0.0928 0.801 Other_T L1
ENSG00000162607 USP1 58607 sc-eQTL 8.41e-01 -0.0131 0.0655 0.801 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -872671 sc-eQTL 6.17e-01 0.0614 0.123 0.804 B_Activated L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 6.93e-01 -0.0453 0.114 0.804 B_Activated L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.75e-01 0.107 0.12 0.804 B_Activated L2
ENSG00000132849 PATJ 752498 sc-eQTL 5.56e-02 0.195 0.101 0.804 B_Activated L2
ENSG00000162604 TM2D1 769481 sc-eQTL 8.88e-02 0.22 0.129 0.804 B_Activated L2
ENSG00000162607 USP1 58607 sc-eQTL 2.66e-01 0.142 0.127 0.804 B_Activated L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.39e-01 -0.0552 0.118 0.8 B_Intermediate L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.08e-01 0.114 0.112 0.8 B_Intermediate L2
ENSG00000125703 ATG4C -289228 sc-eQTL 7.94e-01 -0.0248 0.0951 0.8 B_Intermediate L2
ENSG00000132849 PATJ 752498 sc-eQTL 9.68e-01 0.00419 0.103 0.8 B_Intermediate L2
ENSG00000162604 TM2D1 769481 sc-eQTL 7.90e-01 0.0288 0.108 0.8 B_Intermediate L2
ENSG00000162607 USP1 58607 sc-eQTL 6.33e-01 0.054 0.113 0.8 B_Intermediate L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.54e-01 0.0517 0.115 0.802 B_Memory L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 2.57e-01 0.122 0.108 0.802 B_Memory L2
ENSG00000125703 ATG4C -289228 sc-eQTL 9.19e-01 0.0104 0.103 0.802 B_Memory L2
ENSG00000132849 PATJ 752498 sc-eQTL 7.28e-02 -0.183 0.102 0.802 B_Memory L2
ENSG00000162604 TM2D1 769481 sc-eQTL 7.48e-02 -0.205 0.114 0.802 B_Memory L2
ENSG00000162607 USP1 58607 sc-eQTL 5.69e-01 0.0675 0.118 0.802 B_Memory L2
ENSG00000088035 ALG6 -872671 sc-eQTL 9.02e-01 0.0141 0.115 0.801 B_Naive1 L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 5.37e-01 0.0678 0.11 0.801 B_Naive1 L2
ENSG00000125703 ATG4C -289228 sc-eQTL 5.19e-01 0.0546 0.0845 0.801 B_Naive1 L2
ENSG00000132849 PATJ 752498 sc-eQTL 4.23e-01 0.0871 0.109 0.801 B_Naive1 L2
ENSG00000162604 TM2D1 769481 sc-eQTL 9.93e-01 0.000837 0.1 0.801 B_Naive1 L2
ENSG00000162607 USP1 58607 sc-eQTL 4.41e-01 -0.076 0.0985 0.801 B_Naive1 L2
ENSG00000088035 ALG6 -872671 sc-eQTL 2.89e-01 -0.124 0.117 0.803 B_Naive2 L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 6.53e-01 0.0508 0.113 0.803 B_Naive2 L2
ENSG00000125703 ATG4C -289228 sc-eQTL 1.96e-01 -0.141 0.108 0.803 B_Naive2 L2
ENSG00000132849 PATJ 752498 sc-eQTL 9.40e-01 -0.00832 0.111 0.803 B_Naive2 L2
ENSG00000162604 TM2D1 769481 sc-eQTL 4.95e-03 -0.314 0.111 0.803 B_Naive2 L2
ENSG00000162607 USP1 58607 sc-eQTL 2.56e-01 -0.128 0.112 0.803 B_Naive2 L2
ENSG00000088035 ALG6 -872671 sc-eQTL 5.45e-01 -0.0726 0.12 0.802 CD4_CTL L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 7.85e-02 0.184 0.104 0.802 CD4_CTL L2
ENSG00000125703 ATG4C -289228 sc-eQTL 8.05e-01 0.0268 0.108 0.802 CD4_CTL L2
ENSG00000132849 PATJ 752498 sc-eQTL 3.35e-01 -0.0837 0.0867 0.802 CD4_CTL L2
ENSG00000162604 TM2D1 769481 sc-eQTL 7.94e-01 0.0291 0.111 0.802 CD4_CTL L2
ENSG00000162607 USP1 58607 sc-eQTL 5.46e-01 0.0668 0.11 0.802 CD4_CTL L2
ENSG00000088035 ALG6 -872671 sc-eQTL 2.36e-01 0.119 0.0997 0.801 CD4_Naive L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 9.32e-01 -0.00838 0.0984 0.801 CD4_Naive L2
ENSG00000125703 ATG4C -289228 sc-eQTL 7.51e-01 0.0276 0.0869 0.801 CD4_Naive L2
ENSG00000132849 PATJ 752498 sc-eQTL 6.50e-01 0.0277 0.061 0.801 CD4_Naive L2
ENSG00000162604 TM2D1 769481 sc-eQTL 4.69e-02 0.174 0.087 0.801 CD4_Naive L2
ENSG00000162607 USP1 58607 sc-eQTL 8.96e-01 -0.0106 0.0812 0.801 CD4_Naive L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.05e-02 -0.208 0.11 0.801 CD4_TCM L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 4.81e-01 0.0695 0.0984 0.801 CD4_TCM L2
ENSG00000125703 ATG4C -289228 sc-eQTL 7.98e-01 0.0246 0.0959 0.801 CD4_TCM L2
ENSG00000132849 PATJ 752498 sc-eQTL 1.96e-01 0.0994 0.0767 0.801 CD4_TCM L2
ENSG00000162604 TM2D1 769481 sc-eQTL 4.49e-01 0.068 0.0897 0.801 CD4_TCM L2
ENSG00000162607 USP1 58607 sc-eQTL 6.12e-01 -0.0471 0.0927 0.801 CD4_TCM L2
ENSG00000088035 ALG6 -872671 sc-eQTL 9.08e-01 -0.0135 0.116 0.801 CD4_TEM L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 6.57e-01 -0.0503 0.113 0.801 CD4_TEM L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.65e-01 -0.0997 0.11 0.801 CD4_TEM L2
ENSG00000132849 PATJ 752498 sc-eQTL 8.19e-01 0.0234 0.102 0.801 CD4_TEM L2
ENSG00000162604 TM2D1 769481 sc-eQTL 2.58e-01 0.122 0.108 0.801 CD4_TEM L2
ENSG00000162607 USP1 58607 sc-eQTL 2.02e-01 0.137 0.107 0.801 CD4_TEM L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.11e-01 0.0564 0.111 0.801 CD8_CTL L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 4.50e-02 0.21 0.104 0.801 CD8_CTL L2
ENSG00000125703 ATG4C -289228 sc-eQTL 1.77e-02 0.264 0.11 0.801 CD8_CTL L2
ENSG00000132849 PATJ 752498 sc-eQTL 2.47e-01 0.122 0.106 0.801 CD8_CTL L2
ENSG00000162604 TM2D1 769481 sc-eQTL 7.88e-01 0.0261 0.0971 0.801 CD8_CTL L2
ENSG00000162607 USP1 58607 sc-eQTL 5.28e-01 -0.0658 0.104 0.801 CD8_CTL L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.57e-01 -0.0481 0.108 0.801 CD8_Naive L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 1.80e-01 -0.15 0.111 0.801 CD8_Naive L2
ENSG00000125703 ATG4C -289228 sc-eQTL 6.17e-01 0.0537 0.107 0.801 CD8_Naive L2
ENSG00000132849 PATJ 752498 sc-eQTL 4.92e-02 0.161 0.0813 0.801 CD8_Naive L2
ENSG00000162604 TM2D1 769481 sc-eQTL 9.79e-01 0.00259 0.1 0.801 CD8_Naive L2
ENSG00000162607 USP1 58607 sc-eQTL 7.91e-01 0.0243 0.0919 0.801 CD8_Naive L2
ENSG00000088035 ALG6 -872671 sc-eQTL 8.46e-01 0.0233 0.12 0.801 CD8_TCM L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.16e-01 0.117 0.117 0.801 CD8_TCM L2
ENSG00000125703 ATG4C -289228 sc-eQTL 6.11e-01 -0.0608 0.119 0.801 CD8_TCM L2
ENSG00000132849 PATJ 752498 sc-eQTL 7.72e-01 -0.032 0.11 0.801 CD8_TCM L2
ENSG00000162604 TM2D1 769481 sc-eQTL 8.14e-02 0.194 0.111 0.801 CD8_TCM L2
ENSG00000162607 USP1 58607 sc-eQTL 5.23e-01 0.0714 0.112 0.801 CD8_TCM L2
ENSG00000088035 ALG6 -872671 sc-eQTL 4.71e-02 0.24 0.12 0.804 CD8_TEM L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 2.97e-01 -0.123 0.117 0.804 CD8_TEM L2
ENSG00000125703 ATG4C -289228 sc-eQTL 5.47e-01 0.0681 0.113 0.804 CD8_TEM L2
ENSG00000132849 PATJ 752498 sc-eQTL 3.05e-01 0.117 0.114 0.804 CD8_TEM L2
ENSG00000162604 TM2D1 769481 sc-eQTL 8.74e-01 -0.0185 0.117 0.804 CD8_TEM L2
ENSG00000162607 USP1 58607 sc-eQTL 7.60e-01 0.0358 0.117 0.804 CD8_TEM L2
ENSG00000088035 ALG6 -872671 sc-eQTL 8.45e-01 0.0213 0.109 0.801 MAIT L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 2.28e-01 0.126 0.104 0.801 MAIT L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.03e-01 0.114 0.11 0.801 MAIT L2
ENSG00000132849 PATJ 752498 sc-eQTL 5.95e-01 0.0497 0.0934 0.801 MAIT L2
ENSG00000162604 TM2D1 769481 sc-eQTL 7.46e-01 -0.0345 0.106 0.801 MAIT L2
ENSG00000162607 USP1 58607 sc-eQTL 7.88e-01 0.0295 0.11 0.801 MAIT L2
ENSG00000088035 ALG6 -872671 sc-eQTL 9.31e-01 -0.00992 0.115 0.804 NK_CD56bright L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 5.94e-01 -0.0531 0.0994 0.804 NK_CD56bright L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.25e-01 -0.109 0.111 0.804 NK_CD56bright L2
ENSG00000132849 PATJ 752498 sc-eQTL 1.31e-01 -0.164 0.108 0.804 NK_CD56bright L2
ENSG00000162604 TM2D1 769481 sc-eQTL 8.60e-01 0.0195 0.111 0.804 NK_CD56bright L2
ENSG00000162607 USP1 58607 sc-eQTL 5.87e-01 0.0649 0.119 0.804 NK_CD56bright L2
ENSG00000088035 ALG6 -872671 sc-eQTL 8.38e-01 0.0228 0.112 0.804 NK_CD56dim L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.22e-02 0.207 0.096 0.804 NK_CD56dim L2
ENSG00000125703 ATG4C -289228 sc-eQTL 5.12e-01 -0.0647 0.0985 0.804 NK_CD56dim L2
ENSG00000132849 PATJ 752498 sc-eQTL 1.77e-03 -0.331 0.104 0.804 NK_CD56dim L2
ENSG00000162604 TM2D1 769481 sc-eQTL 6.58e-01 0.0449 0.101 0.804 NK_CD56dim L2
ENSG00000162607 USP1 58607 sc-eQTL 9.40e-01 -0.00819 0.109 0.804 NK_CD56dim L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.80e-01 -0.0505 0.123 0.804 NK_HLA L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 6.02e-01 0.0489 0.0937 0.804 NK_HLA L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.68e-01 0.0981 0.109 0.804 NK_HLA L2
ENSG00000132849 PATJ 752498 sc-eQTL 1.63e-01 -0.141 0.101 0.804 NK_HLA L2
ENSG00000162604 TM2D1 769481 sc-eQTL 7.95e-01 0.0299 0.115 0.804 NK_HLA L2
ENSG00000162607 USP1 58607 sc-eQTL 3.15e-01 0.12 0.119 0.804 NK_HLA L2
ENSG00000088035 ALG6 -872671 sc-eQTL 7.29e-01 0.0376 0.108 0.804 NK_cytokine L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 1.99e-04 0.368 0.0972 0.804 NK_cytokine L2
ENSG00000125703 ATG4C -289228 sc-eQTL 2.23e-01 0.125 0.102 0.804 NK_cytokine L2
ENSG00000132849 PATJ 752498 sc-eQTL 3.72e-01 0.0969 0.108 0.804 NK_cytokine L2
ENSG00000162604 TM2D1 769481 sc-eQTL 6.36e-01 0.0502 0.106 0.804 NK_cytokine L2
ENSG00000162607 USP1 58607 sc-eQTL 6.92e-02 -0.203 0.111 0.804 NK_cytokine L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.12e-01 0.0689 0.135 0.778 PB L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 9.26e-01 -0.0135 0.145 0.778 PB L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.09e-01 -0.129 0.126 0.778 PB L2
ENSG00000132849 PATJ 752498 sc-eQTL 2.99e-01 -0.136 0.13 0.778 PB L2
ENSG00000162604 TM2D1 769481 sc-eQTL 2.72e-01 -0.14 0.127 0.778 PB L2
ENSG00000162607 USP1 58607 sc-eQTL 9.34e-01 0.0104 0.125 0.778 PB L2
ENSG00000088035 ALG6 -872671 sc-eQTL 3.27e-01 0.106 0.108 0.802 Pro_T L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 1.03e-01 0.177 0.108 0.802 Pro_T L2
ENSG00000125703 ATG4C -289228 sc-eQTL 4.16e-01 -0.0775 0.0951 0.802 Pro_T L2
ENSG00000132849 PATJ 752498 sc-eQTL 5.13e-01 0.068 0.104 0.802 Pro_T L2
ENSG00000162604 TM2D1 769481 sc-eQTL 7.10e-01 -0.0434 0.116 0.802 Pro_T L2
ENSG00000162607 USP1 58607 sc-eQTL 2.93e-01 0.0691 0.0655 0.802 Pro_T L2
ENSG00000088035 ALG6 -872671 sc-eQTL 3.50e-01 0.109 0.116 0.801 Treg L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.64e-01 0.0969 0.106 0.801 Treg L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.82e-01 0.0954 0.109 0.801 Treg L2
ENSG00000132849 PATJ 752498 sc-eQTL 8.80e-01 -0.0153 0.101 0.801 Treg L2
ENSG00000162604 TM2D1 769481 sc-eQTL 6.83e-01 -0.0455 0.111 0.801 Treg L2
ENSG00000162607 USP1 58607 sc-eQTL 7.17e-01 -0.0401 0.11 0.801 Treg L2
ENSG00000088035 ALG6 -872671 sc-eQTL 5.32e-01 -0.0712 0.114 0.807 cDC L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.36e-01 0.107 0.111 0.807 cDC L2
ENSG00000125703 ATG4C -289228 sc-eQTL 6.23e-01 0.0477 0.0969 0.807 cDC L2
ENSG00000162604 TM2D1 769481 sc-eQTL 6.50e-01 0.0551 0.121 0.807 cDC L2
ENSG00000162607 USP1 58607 sc-eQTL 7.88e-01 -0.0295 0.109 0.807 cDC L2
ENSG00000088035 ALG6 -872671 sc-eQTL 1.42e-01 -0.153 0.104 0.801 cMono_IL1B L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.97e-02 0.225 0.109 0.801 cMono_IL1B L2
ENSG00000125703 ATG4C -289228 sc-eQTL 9.52e-01 0.00464 0.0772 0.801 cMono_IL1B L2
ENSG00000162604 TM2D1 769481 sc-eQTL 4.54e-01 -0.0596 0.0795 0.801 cMono_IL1B L2
ENSG00000162607 USP1 58607 sc-eQTL 6.65e-01 -0.0418 0.0964 0.801 cMono_IL1B L2
ENSG00000240563 L1TD1 300055 sc-eQTL 9.97e-01 0.000416 0.0969 0.801 cMono_IL1B L2
ENSG00000088035 ALG6 -872671 sc-eQTL 2.77e-02 -0.257 0.116 0.801 cMono_S100A L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 2.01e-01 0.139 0.108 0.801 cMono_S100A L2
ENSG00000125703 ATG4C -289228 sc-eQTL 9.50e-01 0.00587 0.0942 0.801 cMono_S100A L2
ENSG00000162604 TM2D1 769481 sc-eQTL 1.68e-01 -0.132 0.0957 0.801 cMono_S100A L2
ENSG00000162607 USP1 58607 sc-eQTL 3.38e-01 0.105 0.109 0.801 cMono_S100A L2
ENSG00000240563 L1TD1 300055 sc-eQTL 8.21e-01 -0.0206 0.091 0.801 cMono_S100A L2
ENSG00000088035 ALG6 -872671 sc-eQTL 7.36e-01 -0.0478 0.141 0.806 gdT L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 5.85e-01 0.0759 0.139 0.806 gdT L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.37e-01 -0.127 0.132 0.806 gdT L2
ENSG00000132849 PATJ 752498 sc-eQTL 4.41e-01 0.0997 0.129 0.806 gdT L2
ENSG00000162604 TM2D1 769481 sc-eQTL 5.99e-01 -0.0718 0.136 0.806 gdT L2
ENSG00000162607 USP1 58607 sc-eQTL 1.00e-01 -0.218 0.132 0.806 gdT L2
ENSG00000088035 ALG6 -872671 sc-eQTL 4.05e-01 0.0925 0.111 0.807 intMono L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 4.44e-01 -0.0868 0.113 0.807 intMono L2
ENSG00000125703 ATG4C -289228 sc-eQTL 1.88e-01 0.142 0.108 0.807 intMono L2
ENSG00000162604 TM2D1 769481 sc-eQTL 2.91e-01 -0.121 0.114 0.807 intMono L2
ENSG00000162607 USP1 58607 sc-eQTL 5.73e-02 -0.23 0.12 0.807 intMono L2
ENSG00000240563 L1TD1 300055 sc-eQTL 5.71e-01 0.0506 0.0891 0.807 intMono L2
ENSG00000088035 ALG6 -872671 sc-eQTL 3.21e-01 0.113 0.114 0.808 ncMono L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 4.94e-01 0.077 0.112 0.808 ncMono L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.50e-01 0.0983 0.105 0.808 ncMono L2
ENSG00000162604 TM2D1 769481 sc-eQTL 4.34e-01 -0.0888 0.113 0.808 ncMono L2
ENSG00000162607 USP1 58607 sc-eQTL 1.85e-01 -0.149 0.112 0.808 ncMono L2
ENSG00000240563 L1TD1 300055 sc-eQTL 2.50e-01 -0.0916 0.0794 0.808 ncMono L2
ENSG00000088035 ALG6 -872671 sc-eQTL 6.79e-01 0.051 0.123 0.805 pDC L2
ENSG00000116641 DOCK7 -193482 sc-eQTL 8.29e-01 -0.0272 0.126 0.805 pDC L2
ENSG00000125703 ATG4C -289228 sc-eQTL 3.95e-01 0.0961 0.113 0.805 pDC L2
ENSG00000162604 TM2D1 769481 sc-eQTL 4.04e-01 -0.0923 0.11 0.805 pDC L2
ENSG00000162607 USP1 58607 sc-eQTL 2.10e-01 0.162 0.129 0.805 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -872671 sc-eQTL 9.50e-01 -0.00751 0.118 0.801 B_Memory LOneK1K
ENSG00000116641 DOCK7 -193482 sc-eQTL 2.40e-01 0.121 0.102 0.801 B_Memory LOneK1K
ENSG00000125703 ATG4C -289228 sc-eQTL 8.59e-01 -0.0148 0.0831 0.801 B_Memory LOneK1K
ENSG00000132849 PATJ 752498 sc-eQTL 5.56e-01 -0.0542 0.092 0.801 B_Memory LOneK1K
ENSG00000162604 TM2D1 769481 sc-eQTL 9.08e-01 -0.012 0.105 0.801 B_Memory LOneK1K
ENSG00000162607 USP1 58607 sc-eQTL 2.10e-01 0.133 0.106 0.801 B_Memory LOneK1K
ENSG00000088035 ALG6 -872671 sc-eQTL 9.86e-01 -0.00197 0.114 0.801 B_Naive LOneK1K
ENSG00000116641 DOCK7 -193482 sc-eQTL 5.47e-01 0.0643 0.107 0.801 B_Naive LOneK1K
ENSG00000125703 ATG4C -289228 sc-eQTL 7.97e-01 -0.021 0.0814 0.801 B_Naive LOneK1K
ENSG00000132849 PATJ 752498 sc-eQTL 5.12e-01 0.064 0.0973 0.801 B_Naive LOneK1K
ENSG00000162604 TM2D1 769481 sc-eQTL 9.66e-02 -0.154 0.0923 0.801 B_Naive LOneK1K
ENSG00000162607 USP1 58607 sc-eQTL 3.75e-01 -0.0878 0.0987 0.801 B_Naive LOneK1K
ENSG00000088035 ALG6 -872671 sc-eQTL 1.40e-02 -0.251 0.101 0.801 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -193482 sc-eQTL 3.62e-02 0.216 0.102 0.801 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -289228 sc-eQTL 7.96e-01 0.0185 0.0715 0.801 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 769481 sc-eQTL 1.03e-01 -0.121 0.0741 0.801 CD14_Mono LOneK1K
ENSG00000162607 USP1 58607 sc-eQTL 6.39e-01 0.0424 0.0904 0.801 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 300055 sc-eQTL 8.38e-01 0.02 0.098 0.801 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -872671 sc-eQTL 2.44e-01 0.133 0.114 0.804 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -193482 sc-eQTL 7.14e-01 0.0415 0.113 0.804 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -289228 sc-eQTL 2.64e-01 0.108 0.0963 0.804 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 769481 sc-eQTL 1.47e-01 -0.163 0.112 0.804 CD16_Mono LOneK1K
ENSG00000162607 USP1 58607 sc-eQTL 1.72e-02 -0.25 0.104 0.804 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 300055 sc-eQTL 6.26e-01 -0.035 0.0718 0.804 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -872671 sc-eQTL 8.92e-01 0.0141 0.103 0.804 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -193482 sc-eQTL 2.33e-03 0.279 0.0905 0.804 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -289228 sc-eQTL 5.85e-01 0.0505 0.0923 0.804 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 752498 sc-eQTL 5.21e-02 -0.193 0.0987 0.804 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 769481 sc-eQTL 5.10e-01 0.0601 0.0912 0.804 NK_CD56dim LOneK1K
ENSG00000162607 USP1 58607 sc-eQTL 1.11e-01 -0.158 0.0988 0.804 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -193464 eQTL 8.17e-38 0.319 0.0237 0.0 0.0 0.223
ENSG00000125703 ATG4C -289228 eQTL 0.008 0.052 0.0196 0.0 0.0 0.223
ENSG00000132855 ANGPTL3 -102583 pQTL 1.91e-09 0.206 0.0341 0.0 0.0 0.223
ENSG00000162607 USP1 58607 eQTL 4.63e-13 0.107 0.0146 0.0283 0.0244 0.223

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 -193464 2.41e-06 2.61e-06 2.62e-07 1.86e-06 4.92e-07 7.92e-07 1.78e-06 4.28e-07 1.74e-06 7.42e-07 2.48e-06 1.45e-06 3.27e-06 1.42e-06 4.38e-07 1.1e-06 1.27e-06 1.89e-06 7.66e-07 8.01e-07 7.19e-07 2.25e-06 2.12e-06 9.4e-07 3.97e-06 1.02e-06 1.15e-06 9.81e-07 1.92e-06 2.94e-06 1.45e-06 2.83e-07 3.85e-07 1.23e-06 1.03e-06 7.09e-07 7.29e-07 4.41e-07 1.11e-06 1.87e-07 3.56e-07 3.28e-06 4.1e-07 1.99e-07 3.13e-07 2.97e-07 4.79e-07 2.65e-07 2.91e-07
ENSG00000162607 USP1 58607 7.7e-06 9.64e-06 1.35e-06 4.79e-06 1.72e-06 3.28e-06 9.38e-06 1.21e-06 6.18e-06 4.2e-06 1.06e-05 4.59e-06 1.27e-05 3.95e-06 1.54e-06 4.99e-06 4.13e-06 5.52e-06 2.58e-06 2.26e-06 3.66e-06 7.66e-06 6.87e-06 2.76e-06 1.31e-05 2.35e-06 3.64e-06 1.75e-06 7.82e-06 8.81e-06 4.49e-06 4.86e-07 7.42e-07 2.77e-06 3.55e-06 2.1e-06 1.3e-06 1.35e-06 1.61e-06 8.66e-07 7.64e-07 1.18e-05 8.57e-07 1.75e-07 7.87e-07 9.69e-07 9.78e-07 6.09e-07 6.03e-07