logo

Genes within 1Mb (chr1:62427538:A:AT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -940037 sc-eQTL 5.34e-02 0.149 0.0767 0.498 B L1
ENSG00000116641 DOCK7 -260848 sc-eQTL 8.93e-01 0.0104 0.0774 0.498 B L1
ENSG00000125703 ATG4C -356594 sc-eQTL 1.63e-01 -0.075 0.0536 0.498 B L1
ENSG00000132849 PATJ 685132 sc-eQTL 5.13e-01 -0.0428 0.0652 0.498 B L1
ENSG00000162604 TM2D1 702115 sc-eQTL 1.68e-02 0.155 0.0643 0.498 B L1
ENSG00000162607 USP1 -8759 sc-eQTL 4.17e-01 0.0603 0.0742 0.498 B L1
ENSG00000088035 ALG6 -940037 sc-eQTL 2.38e-01 0.0838 0.0708 0.498 CD4T L1
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.12e-01 -0.0472 0.0719 0.498 CD4T L1
ENSG00000125703 ATG4C -356594 sc-eQTL 6.44e-01 -0.0269 0.0581 0.498 CD4T L1
ENSG00000132849 PATJ 685132 sc-eQTL 3.24e-02 -0.1 0.0466 0.498 CD4T L1
ENSG00000162604 TM2D1 702115 sc-eQTL 2.06e-01 -0.0724 0.0571 0.498 CD4T L1
ENSG00000162607 USP1 -8759 sc-eQTL 7.73e-01 0.0163 0.0564 0.498 CD4T L1
ENSG00000088035 ALG6 -940037 sc-eQTL 5.41e-02 0.151 0.078 0.498 CD8T L1
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.80e-01 0.0442 0.0797 0.498 CD8T L1
ENSG00000125703 ATG4C -356594 sc-eQTL 8.83e-02 -0.129 0.0752 0.498 CD8T L1
ENSG00000132849 PATJ 685132 sc-eQTL 7.29e-01 -0.016 0.0462 0.498 CD8T L1
ENSG00000162604 TM2D1 702115 sc-eQTL 4.10e-01 0.0572 0.0692 0.498 CD8T L1
ENSG00000162607 USP1 -8759 sc-eQTL 7.18e-01 0.0238 0.066 0.498 CD8T L1
ENSG00000088035 ALG6 -940037 sc-eQTL 3.75e-01 -0.0725 0.0814 0.5 DC L1
ENSG00000116641 DOCK7 -260848 sc-eQTL 3.97e-01 -0.0708 0.0834 0.5 DC L1
ENSG00000125703 ATG4C -356594 sc-eQTL 9.36e-01 -0.00525 0.0654 0.5 DC L1
ENSG00000162604 TM2D1 702115 sc-eQTL 1.15e-01 -0.12 0.0757 0.5 DC L1
ENSG00000162607 USP1 -8759 sc-eQTL 9.22e-01 0.00779 0.0798 0.5 DC L1
ENSG00000088035 ALG6 -940037 sc-eQTL 9.28e-01 0.0073 0.0805 0.498 Mono L1
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.68e-01 0.0445 0.0778 0.498 Mono L1
ENSG00000125703 ATG4C -356594 sc-eQTL 3.75e-01 -0.0467 0.0525 0.498 Mono L1
ENSG00000162604 TM2D1 702115 sc-eQTL 7.47e-01 0.0188 0.0584 0.498 Mono L1
ENSG00000162607 USP1 -8759 sc-eQTL 8.96e-01 -0.00891 0.0683 0.498 Mono L1
ENSG00000240563 L1TD1 232689 sc-eQTL 1.60e-01 0.0895 0.0634 0.498 Mono L1
ENSG00000088035 ALG6 -940037 sc-eQTL 4.07e-01 0.065 0.0782 0.496 NK L1
ENSG00000116641 DOCK7 -260848 sc-eQTL 1.04e-03 -0.209 0.0629 0.496 NK L1
ENSG00000125703 ATG4C -356594 sc-eQTL 7.65e-01 -0.0207 0.0693 0.496 NK L1
ENSG00000132849 PATJ 685132 sc-eQTL 2.70e-01 0.0749 0.0677 0.496 NK L1
ENSG00000162604 TM2D1 702115 sc-eQTL 3.11e-01 -0.0705 0.0694 0.496 NK L1
ENSG00000162607 USP1 -8759 sc-eQTL 4.48e-01 0.0585 0.0768 0.496 NK L1
ENSG00000088035 ALG6 -940037 sc-eQTL 3.03e-01 -0.0785 0.076 0.498 Other_T L1
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.98e-01 -0.0411 0.0777 0.498 Other_T L1
ENSG00000125703 ATG4C -356594 sc-eQTL 5.70e-01 -0.0383 0.0673 0.498 Other_T L1
ENSG00000132849 PATJ 685132 sc-eQTL 8.37e-01 -0.0129 0.0627 0.498 Other_T L1
ENSG00000162604 TM2D1 702115 sc-eQTL 9.34e-01 -0.00612 0.0736 0.498 Other_T L1
ENSG00000162607 USP1 -8759 sc-eQTL 9.78e-01 -0.00143 0.0518 0.498 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -940037 sc-eQTL 3.69e-01 -0.0887 0.0983 0.49 B_Activated L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 1.24e-01 0.141 0.0911 0.49 B_Activated L2
ENSG00000125703 ATG4C -356594 sc-eQTL 2.39e-01 -0.114 0.0961 0.49 B_Activated L2
ENSG00000132849 PATJ 685132 sc-eQTL 6.39e-01 -0.0386 0.082 0.49 B_Activated L2
ENSG00000162604 TM2D1 702115 sc-eQTL 2.28e-01 0.126 0.104 0.49 B_Activated L2
ENSG00000162607 USP1 -8759 sc-eQTL 8.89e-01 0.0142 0.102 0.49 B_Activated L2
ENSG00000088035 ALG6 -940037 sc-eQTL 2.36e-01 0.108 0.0907 0.496 B_Intermediate L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 4.37e-01 0.0676 0.0868 0.496 B_Intermediate L2
ENSG00000125703 ATG4C -356594 sc-eQTL 4.27e-01 0.0584 0.0735 0.496 B_Intermediate L2
ENSG00000132849 PATJ 685132 sc-eQTL 7.24e-01 -0.0281 0.0797 0.496 B_Intermediate L2
ENSG00000162604 TM2D1 702115 sc-eQTL 7.47e-01 0.027 0.0836 0.496 B_Intermediate L2
ENSG00000162607 USP1 -8759 sc-eQTL 3.64e-01 0.0794 0.0873 0.496 B_Intermediate L2
ENSG00000088035 ALG6 -940037 sc-eQTL 4.52e-01 -0.0679 0.0901 0.496 B_Memory L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 3.38e-01 -0.0811 0.0844 0.496 B_Memory L2
ENSG00000125703 ATG4C -356594 sc-eQTL 6.64e-01 0.035 0.0804 0.496 B_Memory L2
ENSG00000132849 PATJ 685132 sc-eQTL 8.25e-01 -0.0178 0.0803 0.496 B_Memory L2
ENSG00000162604 TM2D1 702115 sc-eQTL 1.41e-01 0.133 0.0898 0.496 B_Memory L2
ENSG00000162607 USP1 -8759 sc-eQTL 3.19e-01 -0.0926 0.0926 0.496 B_Memory L2
ENSG00000088035 ALG6 -940037 sc-eQTL 1.06e-01 0.144 0.0889 0.498 B_Naive1 L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 8.21e-01 -0.0194 0.0857 0.498 B_Naive1 L2
ENSG00000125703 ATG4C -356594 sc-eQTL 2.48e-01 -0.0763 0.0658 0.498 B_Naive1 L2
ENSG00000132849 PATJ 685132 sc-eQTL 2.67e-01 -0.094 0.0846 0.498 B_Naive1 L2
ENSG00000162604 TM2D1 702115 sc-eQTL 5.03e-01 0.0523 0.0779 0.498 B_Naive1 L2
ENSG00000162607 USP1 -8759 sc-eQTL 2.69e-01 0.0852 0.0768 0.498 B_Naive1 L2
ENSG00000088035 ALG6 -940037 sc-eQTL 2.41e-02 0.206 0.0906 0.496 B_Naive2 L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 2.23e-01 0.107 0.0879 0.496 B_Naive2 L2
ENSG00000125703 ATG4C -356594 sc-eQTL 9.88e-01 0.00125 0.0849 0.496 B_Naive2 L2
ENSG00000132849 PATJ 685132 sc-eQTL 7.31e-01 0.0299 0.0869 0.496 B_Naive2 L2
ENSG00000162604 TM2D1 702115 sc-eQTL 5.94e-02 0.165 0.0872 0.496 B_Naive2 L2
ENSG00000162607 USP1 -8759 sc-eQTL 3.44e-01 0.0829 0.0875 0.496 B_Naive2 L2
ENSG00000088035 ALG6 -940037 sc-eQTL 9.73e-01 0.00328 0.0951 0.507 CD4_CTL L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.51e-01 -0.0497 0.0831 0.507 CD4_CTL L2
ENSG00000125703 ATG4C -356594 sc-eQTL 7.33e-01 -0.0294 0.086 0.507 CD4_CTL L2
ENSG00000132849 PATJ 685132 sc-eQTL 6.14e-01 0.0347 0.0689 0.507 CD4_CTL L2
ENSG00000162604 TM2D1 702115 sc-eQTL 2.01e-02 -0.204 0.0869 0.507 CD4_CTL L2
ENSG00000162607 USP1 -8759 sc-eQTL 6.67e-01 -0.0378 0.0876 0.507 CD4_CTL L2
ENSG00000088035 ALG6 -940037 sc-eQTL 4.77e-01 -0.0558 0.0784 0.498 CD4_Naive L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 8.59e-01 -0.0138 0.0772 0.498 CD4_Naive L2
ENSG00000125703 ATG4C -356594 sc-eQTL 6.99e-01 -0.0264 0.0682 0.498 CD4_Naive L2
ENSG00000132849 PATJ 685132 sc-eQTL 1.19e-01 -0.0746 0.0476 0.498 CD4_Naive L2
ENSG00000162604 TM2D1 702115 sc-eQTL 5.55e-01 -0.0407 0.0689 0.498 CD4_Naive L2
ENSG00000162607 USP1 -8759 sc-eQTL 7.87e-01 -0.0173 0.0637 0.498 CD4_Naive L2
ENSG00000088035 ALG6 -940037 sc-eQTL 4.79e-04 0.303 0.0855 0.498 CD4_TCM L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.35e-01 0.0484 0.0779 0.498 CD4_TCM L2
ENSG00000125703 ATG4C -356594 sc-eQTL 4.80e-01 -0.0537 0.0758 0.498 CD4_TCM L2
ENSG00000132849 PATJ 685132 sc-eQTL 3.85e-01 -0.053 0.0608 0.498 CD4_TCM L2
ENSG00000162604 TM2D1 702115 sc-eQTL 4.26e-01 -0.0566 0.071 0.498 CD4_TCM L2
ENSG00000162607 USP1 -8759 sc-eQTL 3.29e-01 0.0716 0.0732 0.498 CD4_TCM L2
ENSG00000088035 ALG6 -940037 sc-eQTL 3.52e-01 0.0854 0.0916 0.498 CD4_TEM L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 8.29e-01 -0.0194 0.0895 0.498 CD4_TEM L2
ENSG00000125703 ATG4C -356594 sc-eQTL 4.83e-01 -0.061 0.0868 0.498 CD4_TEM L2
ENSG00000132849 PATJ 685132 sc-eQTL 2.24e-01 -0.0985 0.0807 0.498 CD4_TEM L2
ENSG00000162604 TM2D1 702115 sc-eQTL 3.15e-01 -0.0857 0.0851 0.498 CD4_TEM L2
ENSG00000162607 USP1 -8759 sc-eQTL 4.03e-01 -0.0711 0.0848 0.498 CD4_TEM L2
ENSG00000088035 ALG6 -940037 sc-eQTL 1.73e-01 0.118 0.0866 0.498 CD8_CTL L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.19e-01 0.0533 0.0825 0.498 CD8_CTL L2
ENSG00000125703 ATG4C -356594 sc-eQTL 2.04e-02 -0.203 0.0868 0.498 CD8_CTL L2
ENSG00000132849 PATJ 685132 sc-eQTL 7.12e-01 -0.0307 0.0832 0.498 CD8_CTL L2
ENSG00000162604 TM2D1 702115 sc-eQTL 1.74e-01 0.104 0.076 0.498 CD8_CTL L2
ENSG00000162607 USP1 -8759 sc-eQTL 7.18e-01 0.0296 0.0818 0.498 CD8_CTL L2
ENSG00000088035 ALG6 -940037 sc-eQTL 3.90e-01 0.073 0.0848 0.498 CD8_Naive L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 7.61e-02 0.155 0.0871 0.498 CD8_Naive L2
ENSG00000125703 ATG4C -356594 sc-eQTL 2.58e-01 -0.0953 0.084 0.498 CD8_Naive L2
ENSG00000132849 PATJ 685132 sc-eQTL 5.36e-01 -0.0399 0.0644 0.498 CD8_Naive L2
ENSG00000162604 TM2D1 702115 sc-eQTL 3.14e-01 0.0792 0.0785 0.498 CD8_Naive L2
ENSG00000162607 USP1 -8759 sc-eQTL 6.06e-01 -0.0373 0.0721 0.498 CD8_Naive L2
ENSG00000088035 ALG6 -940037 sc-eQTL 6.00e-01 -0.0487 0.0928 0.505 CD8_TCM L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 4.91e-01 -0.0624 0.0905 0.505 CD8_TCM L2
ENSG00000125703 ATG4C -356594 sc-eQTL 5.84e-01 0.0509 0.0926 0.505 CD8_TCM L2
ENSG00000132849 PATJ 685132 sc-eQTL 8.31e-01 0.0182 0.0853 0.505 CD8_TCM L2
ENSG00000162604 TM2D1 702115 sc-eQTL 6.21e-01 -0.0429 0.0867 0.505 CD8_TCM L2
ENSG00000162607 USP1 -8759 sc-eQTL 3.25e-01 0.0853 0.0865 0.505 CD8_TCM L2
ENSG00000088035 ALG6 -940037 sc-eQTL 9.07e-01 0.011 0.0943 0.498 CD8_TEM L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 8.67e-01 0.0153 0.0914 0.498 CD8_TEM L2
ENSG00000125703 ATG4C -356594 sc-eQTL 5.81e-01 -0.0485 0.0878 0.498 CD8_TEM L2
ENSG00000132849 PATJ 685132 sc-eQTL 2.07e-01 -0.112 0.0886 0.498 CD8_TEM L2
ENSG00000162604 TM2D1 702115 sc-eQTL 3.67e-01 0.0817 0.0904 0.498 CD8_TEM L2
ENSG00000162607 USP1 -8759 sc-eQTL 1.90e-02 0.212 0.0895 0.498 CD8_TEM L2
ENSG00000088035 ALG6 -940037 sc-eQTL 5.86e-01 -0.046 0.0843 0.5 MAIT L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 7.34e-01 0.0275 0.0808 0.5 MAIT L2
ENSG00000125703 ATG4C -356594 sc-eQTL 2.98e-01 -0.0888 0.085 0.5 MAIT L2
ENSG00000132849 PATJ 685132 sc-eQTL 5.94e-01 0.0385 0.0721 0.5 MAIT L2
ENSG00000162604 TM2D1 702115 sc-eQTL 8.05e-01 0.0202 0.082 0.5 MAIT L2
ENSG00000162607 USP1 -8759 sc-eQTL 7.32e-01 0.0291 0.0847 0.5 MAIT L2
ENSG00000088035 ALG6 -940037 sc-eQTL 1.01e-01 0.147 0.089 0.498 NK_CD56bright L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 3.02e-01 -0.0802 0.0774 0.498 NK_CD56bright L2
ENSG00000125703 ATG4C -356594 sc-eQTL 3.85e-01 0.0753 0.0865 0.498 NK_CD56bright L2
ENSG00000132849 PATJ 685132 sc-eQTL 2.44e-01 0.0989 0.0847 0.498 NK_CD56bright L2
ENSG00000162604 TM2D1 702115 sc-eQTL 1.64e-01 -0.12 0.0861 0.498 NK_CD56bright L2
ENSG00000162607 USP1 -8759 sc-eQTL 4.78e-01 -0.0662 0.093 0.498 NK_CD56bright L2
ENSG00000088035 ALG6 -940037 sc-eQTL 8.14e-01 0.0207 0.0878 0.498 NK_CD56dim L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.15e-03 -0.212 0.075 0.498 NK_CD56dim L2
ENSG00000125703 ATG4C -356594 sc-eQTL 8.07e-01 0.019 0.0776 0.498 NK_CD56dim L2
ENSG00000132849 PATJ 685132 sc-eQTL 1.65e-01 0.117 0.0838 0.498 NK_CD56dim L2
ENSG00000162604 TM2D1 702115 sc-eQTL 1.95e-01 -0.103 0.0796 0.498 NK_CD56dim L2
ENSG00000162607 USP1 -8759 sc-eQTL 9.30e-01 -0.00755 0.0856 0.498 NK_CD56dim L2
ENSG00000088035 ALG6 -940037 sc-eQTL 2.07e-01 0.124 0.0982 0.495 NK_HLA L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 4.55e-01 -0.0564 0.0753 0.495 NK_HLA L2
ENSG00000125703 ATG4C -356594 sc-eQTL 9.66e-01 -0.00377 0.0877 0.495 NK_HLA L2
ENSG00000132849 PATJ 685132 sc-eQTL 9.51e-01 -0.00496 0.0814 0.495 NK_HLA L2
ENSG00000162604 TM2D1 702115 sc-eQTL 5.87e-01 -0.0502 0.0924 0.495 NK_HLA L2
ENSG00000162607 USP1 -8759 sc-eQTL 5.83e-01 -0.0529 0.0963 0.495 NK_HLA L2
ENSG00000088035 ALG6 -940037 sc-eQTL 4.71e-01 -0.062 0.0858 0.498 NK_cytokine L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.37e-01 -0.0491 0.0795 0.498 NK_cytokine L2
ENSG00000125703 ATG4C -356594 sc-eQTL 7.08e-01 -0.0305 0.0814 0.498 NK_cytokine L2
ENSG00000132849 PATJ 685132 sc-eQTL 9.54e-01 -0.00495 0.0859 0.498 NK_cytokine L2
ENSG00000162604 TM2D1 702115 sc-eQTL 7.80e-01 -0.0235 0.084 0.498 NK_cytokine L2
ENSG00000162607 USP1 -8759 sc-eQTL 1.60e-01 0.124 0.0883 0.498 NK_cytokine L2
ENSG00000088035 ALG6 -940037 sc-eQTL 7.69e-01 0.0334 0.113 0.504 PB L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 2.65e-01 -0.135 0.12 0.504 PB L2
ENSG00000125703 ATG4C -356594 sc-eQTL 2.92e-01 -0.111 0.105 0.504 PB L2
ENSG00000132849 PATJ 685132 sc-eQTL 7.34e-01 -0.0373 0.109 0.504 PB L2
ENSG00000162604 TM2D1 702115 sc-eQTL 5.93e-01 0.0569 0.106 0.504 PB L2
ENSG00000162607 USP1 -8759 sc-eQTL 5.64e-01 -0.0606 0.105 0.504 PB L2
ENSG00000088035 ALG6 -940037 sc-eQTL 3.25e-01 -0.0825 0.0837 0.5 Pro_T L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 4.79e-01 -0.0596 0.084 0.5 Pro_T L2
ENSG00000125703 ATG4C -356594 sc-eQTL 5.56e-01 -0.0434 0.0736 0.5 Pro_T L2
ENSG00000132849 PATJ 685132 sc-eQTL 7.52e-01 -0.0254 0.0804 0.5 Pro_T L2
ENSG00000162604 TM2D1 702115 sc-eQTL 9.63e-01 0.0042 0.09 0.5 Pro_T L2
ENSG00000162607 USP1 -8759 sc-eQTL 2.91e-01 -0.0536 0.0507 0.5 Pro_T L2
ENSG00000088035 ALG6 -940037 sc-eQTL 5.68e-01 -0.0527 0.0922 0.498 Treg L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 2.20e-01 -0.104 0.0844 0.498 Treg L2
ENSG00000125703 ATG4C -356594 sc-eQTL 5.36e-01 -0.0536 0.0865 0.498 Treg L2
ENSG00000132849 PATJ 685132 sc-eQTL 5.07e-01 0.0533 0.0801 0.498 Treg L2
ENSG00000162604 TM2D1 702115 sc-eQTL 3.68e-01 -0.0796 0.0881 0.498 Treg L2
ENSG00000162607 USP1 -8759 sc-eQTL 4.06e-01 0.0728 0.0875 0.498 Treg L2
ENSG00000088035 ALG6 -940037 sc-eQTL 7.69e-01 0.0253 0.0861 0.495 cDC L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 2.22e-02 -0.192 0.0833 0.495 cDC L2
ENSG00000125703 ATG4C -356594 sc-eQTL 8.65e-01 0.0125 0.0734 0.495 cDC L2
ENSG00000162604 TM2D1 702115 sc-eQTL 2.76e-01 -0.0998 0.0914 0.495 cDC L2
ENSG00000162607 USP1 -8759 sc-eQTL 5.57e-01 0.0486 0.0827 0.495 cDC L2
ENSG00000088035 ALG6 -940037 sc-eQTL 4.75e-01 -0.058 0.081 0.498 cMono_IL1B L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 4.54e-01 0.0641 0.0854 0.498 cMono_IL1B L2
ENSG00000125703 ATG4C -356594 sc-eQTL 7.06e-01 -0.0227 0.0601 0.498 cMono_IL1B L2
ENSG00000162604 TM2D1 702115 sc-eQTL 8.69e-01 -0.0103 0.062 0.498 cMono_IL1B L2
ENSG00000162607 USP1 -8759 sc-eQTL 9.79e-01 0.00194 0.0751 0.498 cMono_IL1B L2
ENSG00000240563 L1TD1 232689 sc-eQTL 1.58e-01 0.106 0.0751 0.498 cMono_IL1B L2
ENSG00000088035 ALG6 -940037 sc-eQTL 5.35e-01 0.0562 0.0905 0.498 cMono_S100A L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 9.48e-01 -0.00544 0.084 0.498 cMono_S100A L2
ENSG00000125703 ATG4C -356594 sc-eQTL 1.69e-01 -0.0998 0.0724 0.498 cMono_S100A L2
ENSG00000162604 TM2D1 702115 sc-eQTL 5.46e-01 0.0448 0.0741 0.498 cMono_S100A L2
ENSG00000162607 USP1 -8759 sc-eQTL 8.35e-01 -0.0176 0.0844 0.498 cMono_S100A L2
ENSG00000240563 L1TD1 232689 sc-eQTL 7.05e-01 -0.0266 0.0702 0.498 cMono_S100A L2
ENSG00000088035 ALG6 -940037 sc-eQTL 6.48e-02 0.202 0.109 0.485 gdT L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.33e-01 -0.0673 0.108 0.485 gdT L2
ENSG00000125703 ATG4C -356594 sc-eQTL 1.11e-01 0.164 0.102 0.485 gdT L2
ENSG00000132849 PATJ 685132 sc-eQTL 8.59e-01 -0.0179 0.101 0.485 gdT L2
ENSG00000162604 TM2D1 702115 sc-eQTL 2.53e-02 -0.235 0.104 0.485 gdT L2
ENSG00000162607 USP1 -8759 sc-eQTL 9.25e-01 -0.00982 0.104 0.485 gdT L2
ENSG00000088035 ALG6 -940037 sc-eQTL 8.82e-01 0.0125 0.0835 0.5 intMono L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 4.92e-01 -0.0587 0.0852 0.5 intMono L2
ENSG00000125703 ATG4C -356594 sc-eQTL 6.36e-01 0.0386 0.0814 0.5 intMono L2
ENSG00000162604 TM2D1 702115 sc-eQTL 8.06e-01 0.0212 0.0862 0.5 intMono L2
ENSG00000162607 USP1 -8759 sc-eQTL 2.00e-01 0.117 0.0909 0.5 intMono L2
ENSG00000240563 L1TD1 232689 sc-eQTL 6.43e-01 0.0311 0.0671 0.5 intMono L2
ENSG00000088035 ALG6 -940037 sc-eQTL 2.90e-01 -0.094 0.0885 0.493 ncMono L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 8.34e-01 0.0184 0.0874 0.493 ncMono L2
ENSG00000125703 ATG4C -356594 sc-eQTL 3.38e-01 0.0782 0.0814 0.493 ncMono L2
ENSG00000162604 TM2D1 702115 sc-eQTL 4.99e-01 0.0596 0.0879 0.493 ncMono L2
ENSG00000162607 USP1 -8759 sc-eQTL 9.61e-01 0.00432 0.0872 0.493 ncMono L2
ENSG00000240563 L1TD1 232689 sc-eQTL 7.32e-02 0.111 0.0614 0.493 ncMono L2
ENSG00000088035 ALG6 -940037 sc-eQTL 5.44e-01 -0.0549 0.0903 0.492 pDC L2
ENSG00000116641 DOCK7 -260848 sc-eQTL 1.75e-02 0.218 0.0907 0.492 pDC L2
ENSG00000125703 ATG4C -356594 sc-eQTL 8.66e-01 -0.014 0.0828 0.492 pDC L2
ENSG00000162604 TM2D1 702115 sc-eQTL 3.18e-01 -0.081 0.0809 0.492 pDC L2
ENSG00000162607 USP1 -8759 sc-eQTL 6.47e-01 -0.0434 0.0947 0.492 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -940037 sc-eQTL 3.77e-01 0.0826 0.0933 0.498 B_Memory LOneK1K
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.09e-01 0.0537 0.081 0.498 B_Memory LOneK1K
ENSG00000125703 ATG4C -356594 sc-eQTL 7.54e-01 0.0206 0.0655 0.498 B_Memory LOneK1K
ENSG00000132849 PATJ 685132 sc-eQTL 4.58e-01 -0.0539 0.0725 0.498 B_Memory LOneK1K
ENSG00000162604 TM2D1 702115 sc-eQTL 2.20e-01 0.101 0.0822 0.498 B_Memory LOneK1K
ENSG00000162607 USP1 -8759 sc-eQTL 5.41e-01 -0.0511 0.0836 0.498 B_Memory LOneK1K
ENSG00000088035 ALG6 -940037 sc-eQTL 1.39e-02 0.22 0.0887 0.498 B_Naive LOneK1K
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.90e-01 0.0454 0.084 0.498 B_Naive LOneK1K
ENSG00000125703 ATG4C -356594 sc-eQTL 1.20e-01 -0.0996 0.0638 0.498 B_Naive LOneK1K
ENSG00000132849 PATJ 685132 sc-eQTL 7.81e-01 -0.0213 0.0767 0.498 B_Naive LOneK1K
ENSG00000162604 TM2D1 702115 sc-eQTL 1.53e-01 0.104 0.0728 0.498 B_Naive LOneK1K
ENSG00000162607 USP1 -8759 sc-eQTL 2.13e-01 0.0969 0.0776 0.498 B_Naive LOneK1K
ENSG00000088035 ALG6 -940037 sc-eQTL 9.65e-01 -0.00348 0.0796 0.498 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -260848 sc-eQTL 5.75e-01 0.045 0.0801 0.498 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -356594 sc-eQTL 1.29e-01 -0.084 0.0551 0.498 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 702115 sc-eQTL 8.00e-01 0.0147 0.0578 0.498 CD14_Mono LOneK1K
ENSG00000162607 USP1 -8759 sc-eQTL 8.61e-01 -0.0123 0.07 0.498 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 232689 sc-eQTL 4.11e-01 0.0625 0.0758 0.498 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -940037 sc-eQTL 8.15e-01 -0.0209 0.0894 0.496 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -260848 sc-eQTL 7.24e-01 -0.0313 0.0884 0.496 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -356594 sc-eQTL 1.80e-01 0.101 0.0751 0.496 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 702115 sc-eQTL 6.40e-01 0.0412 0.0881 0.496 CD16_Mono LOneK1K
ENSG00000162607 USP1 -8759 sc-eQTL 2.82e-01 0.0884 0.082 0.496 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 232689 sc-eQTL 1.44e-01 0.0819 0.0558 0.496 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -940037 sc-eQTL 8.51e-01 0.0153 0.0814 0.498 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -260848 sc-eQTL 4.79e-03 -0.204 0.0715 0.498 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -356594 sc-eQTL 9.20e-01 -0.00731 0.0728 0.498 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 685132 sc-eQTL 2.06e-01 0.0991 0.0781 0.498 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 702115 sc-eQTL 5.80e-01 -0.0398 0.0718 0.498 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -8759 sc-eQTL 4.43e-01 0.0601 0.0782 0.498 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -260830 eQTL 0.019 -0.0538 0.0229 0.0 0.0 0.492
ENSG00000125703 ATG4C -356594 eQTL 0.00998 -0.0448 0.0174 0.0 0.0 0.492
ENSG00000132855 ANGPTL3 -169949 pQTL 0.00255 -0.0911 0.0301 0.0 0.0 0.499
ENSG00000162607 USP1 -8759 eQTL 0.00427 -0.0381 0.0133 0.0 0.0 0.492

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000125703 ATG4C -356594 1.4e-05 1.27e-05 1.59e-06 8.5e-06 1.56e-06 5.16e-06 1.23e-05 1.29e-06 1.05e-05 5.39e-06 1.15e-05 5.03e-06 2.16e-05 3.74e-06 3.71e-06 6.64e-06 5.57e-06 9.67e-06 2.58e-06 2.92e-06 6.18e-06 1.03e-05 1.02e-05 3.3e-06 1.26e-05 3.49e-06 5.47e-06 4.58e-06 1.19e-05 7.65e-06 5.06e-06 9.93e-07 1.23e-06 3.59e-06 5.17e-06 2.07e-06 1.78e-06 1.99e-06 2.17e-06 2.02e-06 8.61e-07 1.68e-05 1.38e-06 2.52e-07 6.7e-07 1.62e-06 1.46e-06 6.23e-07 6.16e-07
ENSG00000162607 USP1 -8759 6.88e-05 5.5e-05 6.49e-06 1.84e-05 6.02e-06 2.06e-05 5.83e-05 6.25e-06 4.93e-05 1.83e-05 5.89e-05 2.29e-05 7.69e-05 1.96e-05 7.23e-06 2.71e-05 2.47e-05 3.18e-05 8.18e-06 8.12e-06 1.94e-05 4.67e-05 4.21e-05 9.9e-06 5.19e-05 9.39e-06 1.99e-05 1.68e-05 4.02e-05 2.99e-05 2.64e-05 1.62e-06 3.07e-06 7.73e-06 1.4e-05 6.44e-06 3.57e-06 3.25e-06 5.89e-06 3.88e-06 1.7e-06 5.34e-05 5.45e-06 3.59e-07 2.87e-06 4.98e-06 4.3e-06 2.17e-06 1.48e-06