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Genes within 1Mb (chr1:62426411:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -941164 sc-eQTL 7.75e-01 0.0231 0.081 0.387 B L1
ENSG00000116641 DOCK7 -261975 sc-eQTL 7.16e-01 -0.0295 0.081 0.387 B L1
ENSG00000125703 ATG4C -357721 sc-eQTL 5.92e-01 -0.0302 0.0563 0.387 B L1
ENSG00000132849 PATJ 684005 sc-eQTL 7.34e-01 -0.0233 0.0683 0.387 B L1
ENSG00000162604 TM2D1 700988 sc-eQTL 4.02e-02 0.139 0.0676 0.387 B L1
ENSG00000162607 USP1 -9886 sc-eQTL 2.47e-01 0.0899 0.0775 0.387 B L1
ENSG00000088035 ALG6 -941164 sc-eQTL 2.53e-01 0.0852 0.0743 0.387 CD4T L1
ENSG00000116641 DOCK7 -261975 sc-eQTL 3.74e-01 -0.0671 0.0753 0.387 CD4T L1
ENSG00000125703 ATG4C -357721 sc-eQTL 9.04e-01 0.00736 0.0609 0.387 CD4T L1
ENSG00000132849 PATJ 684005 sc-eQTL 5.68e-01 -0.0283 0.0494 0.387 CD4T L1
ENSG00000162604 TM2D1 700988 sc-eQTL 3.51e-01 -0.056 0.0599 0.387 CD4T L1
ENSG00000162607 USP1 -9886 sc-eQTL 8.99e-01 0.00751 0.0591 0.387 CD4T L1
ENSG00000088035 ALG6 -941164 sc-eQTL 4.07e-02 0.168 0.0817 0.387 CD8T L1
ENSG00000116641 DOCK7 -261975 sc-eQTL 6.08e-01 -0.043 0.0835 0.387 CD8T L1
ENSG00000125703 ATG4C -357721 sc-eQTL 1.29e-01 -0.12 0.079 0.387 CD8T L1
ENSG00000132849 PATJ 684005 sc-eQTL 4.52e-01 -0.0364 0.0484 0.387 CD8T L1
ENSG00000162604 TM2D1 700988 sc-eQTL 6.03e-01 0.0378 0.0726 0.387 CD8T L1
ENSG00000162607 USP1 -9886 sc-eQTL 9.35e-01 0.00565 0.0692 0.387 CD8T L1
ENSG00000088035 ALG6 -941164 sc-eQTL 8.76e-01 -0.0136 0.087 0.39 DC L1
ENSG00000116641 DOCK7 -261975 sc-eQTL 6.86e-01 -0.0361 0.0892 0.39 DC L1
ENSG00000125703 ATG4C -357721 sc-eQTL 2.76e-01 -0.0761 0.0696 0.39 DC L1
ENSG00000162604 TM2D1 700988 sc-eQTL 3.74e-02 -0.169 0.0805 0.39 DC L1
ENSG00000162607 USP1 -9886 sc-eQTL 7.05e-01 -0.0323 0.0852 0.39 DC L1
ENSG00000088035 ALG6 -941164 sc-eQTL 9.85e-01 -0.00164 0.0846 0.387 Mono L1
ENSG00000116641 DOCK7 -261975 sc-eQTL 7.43e-01 0.0269 0.0818 0.387 Mono L1
ENSG00000125703 ATG4C -357721 sc-eQTL 6.73e-01 -0.0234 0.0553 0.387 Mono L1
ENSG00000162604 TM2D1 700988 sc-eQTL 5.29e-01 0.0387 0.0613 0.387 Mono L1
ENSG00000162607 USP1 -9886 sc-eQTL 5.97e-01 -0.038 0.0717 0.387 Mono L1
ENSG00000240563 L1TD1 231562 sc-eQTL 3.18e-01 0.0669 0.0668 0.387 Mono L1
ENSG00000088035 ALG6 -941164 sc-eQTL 7.85e-01 0.0224 0.0819 0.384 NK L1
ENSG00000116641 DOCK7 -261975 sc-eQTL 5.56e-05 -0.267 0.0649 0.384 NK L1
ENSG00000125703 ATG4C -357721 sc-eQTL 3.45e-01 -0.0684 0.0723 0.384 NK L1
ENSG00000132849 PATJ 684005 sc-eQTL 2.59e-01 0.0801 0.0708 0.384 NK L1
ENSG00000162604 TM2D1 700988 sc-eQTL 9.80e-01 -0.00184 0.0727 0.384 NK L1
ENSG00000162607 USP1 -9886 sc-eQTL 3.95e-01 0.0684 0.0803 0.384 NK L1
ENSG00000088035 ALG6 -941164 sc-eQTL 3.40e-01 -0.0764 0.0798 0.387 Other_T L1
ENSG00000116641 DOCK7 -261975 sc-eQTL 4.23e-01 -0.0655 0.0815 0.387 Other_T L1
ENSG00000125703 ATG4C -357721 sc-eQTL 9.22e-01 0.00692 0.0707 0.387 Other_T L1
ENSG00000132849 PATJ 684005 sc-eQTL 6.23e-01 0.0324 0.0658 0.387 Other_T L1
ENSG00000162604 TM2D1 700988 sc-eQTL 3.89e-01 -0.0665 0.0771 0.387 Other_T L1
ENSG00000162607 USP1 -9886 sc-eQTL 9.25e-01 0.00515 0.0543 0.387 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -941164 sc-eQTL 1.62e-01 -0.147 0.105 0.383 B_Activated L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 1.85e-01 0.13 0.0975 0.383 B_Activated L2
ENSG00000125703 ATG4C -357721 sc-eQTL 5.25e-01 -0.0656 0.103 0.383 B_Activated L2
ENSG00000132849 PATJ 684005 sc-eQTL 6.56e-01 -0.0391 0.0875 0.383 B_Activated L2
ENSG00000162604 TM2D1 700988 sc-eQTL 7.03e-01 0.0425 0.111 0.383 B_Activated L2
ENSG00000162607 USP1 -9886 sc-eQTL 8.30e-01 0.0235 0.109 0.383 B_Activated L2
ENSG00000088035 ALG6 -941164 sc-eQTL 6.29e-01 -0.0462 0.0956 0.386 B_Intermediate L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.19e-01 0.00928 0.0914 0.386 B_Intermediate L2
ENSG00000125703 ATG4C -357721 sc-eQTL 4.45e-01 0.0591 0.0772 0.386 B_Intermediate L2
ENSG00000132849 PATJ 684005 sc-eQTL 6.65e-01 -0.0363 0.0837 0.386 B_Intermediate L2
ENSG00000162604 TM2D1 700988 sc-eQTL 9.15e-01 -0.00936 0.0879 0.386 B_Intermediate L2
ENSG00000162607 USP1 -9886 sc-eQTL 5.64e-01 0.0532 0.0919 0.386 B_Intermediate L2
ENSG00000088035 ALG6 -941164 sc-eQTL 4.67e-01 -0.069 0.0947 0.384 B_Memory L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 2.49e-01 -0.102 0.0886 0.384 B_Memory L2
ENSG00000125703 ATG4C -357721 sc-eQTL 1.32e-01 0.127 0.084 0.384 B_Memory L2
ENSG00000132849 PATJ 684005 sc-eQTL 8.26e-01 0.0186 0.0844 0.384 B_Memory L2
ENSG00000162604 TM2D1 700988 sc-eQTL 1.88e-02 0.222 0.0936 0.384 B_Memory L2
ENSG00000162607 USP1 -9886 sc-eQTL 4.33e-01 -0.0766 0.0974 0.384 B_Memory L2
ENSG00000088035 ALG6 -941164 sc-eQTL 5.04e-01 0.0628 0.0938 0.387 B_Naive1 L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 7.63e-01 -0.0271 0.09 0.387 B_Naive1 L2
ENSG00000125703 ATG4C -357721 sc-eQTL 6.27e-01 -0.0337 0.0693 0.387 B_Naive1 L2
ENSG00000132849 PATJ 684005 sc-eQTL 2.30e-01 -0.107 0.0888 0.387 B_Naive1 L2
ENSG00000162604 TM2D1 700988 sc-eQTL 9.24e-01 -0.00783 0.0819 0.387 B_Naive1 L2
ENSG00000162607 USP1 -9886 sc-eQTL 2.71e-01 0.089 0.0806 0.387 B_Naive1 L2
ENSG00000088035 ALG6 -941164 sc-eQTL 2.56e-01 0.11 0.0963 0.384 B_Naive2 L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 3.82e-01 0.0813 0.0927 0.384 B_Naive2 L2
ENSG00000125703 ATG4C -357721 sc-eQTL 8.75e-01 -0.0141 0.0894 0.384 B_Naive2 L2
ENSG00000132849 PATJ 684005 sc-eQTL 5.45e-01 0.0555 0.0914 0.384 B_Naive2 L2
ENSG00000162604 TM2D1 700988 sc-eQTL 5.92e-02 0.174 0.0918 0.384 B_Naive2 L2
ENSG00000162607 USP1 -9886 sc-eQTL 1.11e-01 0.147 0.0917 0.384 B_Naive2 L2
ENSG00000088035 ALG6 -941164 sc-eQTL 9.84e-01 -0.00205 0.1 0.391 CD4_CTL L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 3.76e-01 -0.0776 0.0875 0.391 CD4_CTL L2
ENSG00000125703 ATG4C -357721 sc-eQTL 9.22e-01 -0.00894 0.0907 0.391 CD4_CTL L2
ENSG00000132849 PATJ 684005 sc-eQTL 9.96e-01 0.000327 0.0726 0.391 CD4_CTL L2
ENSG00000162604 TM2D1 700988 sc-eQTL 2.83e-01 -0.0996 0.0926 0.391 CD4_CTL L2
ENSG00000162607 USP1 -9886 sc-eQTL 7.15e-01 -0.0337 0.0923 0.391 CD4_CTL L2
ENSG00000088035 ALG6 -941164 sc-eQTL 7.31e-01 -0.0283 0.0822 0.387 CD4_Naive L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 8.67e-01 -0.0135 0.0808 0.387 CD4_Naive L2
ENSG00000125703 ATG4C -357721 sc-eQTL 9.57e-01 -0.00382 0.0715 0.387 CD4_Naive L2
ENSG00000132849 PATJ 684005 sc-eQTL 7.00e-01 0.0194 0.0501 0.387 CD4_Naive L2
ENSG00000162604 TM2D1 700988 sc-eQTL 5.91e-01 -0.0388 0.0721 0.387 CD4_Naive L2
ENSG00000162607 USP1 -9886 sc-eQTL 6.25e-01 -0.0326 0.0667 0.387 CD4_Naive L2
ENSG00000088035 ALG6 -941164 sc-eQTL 6.82e-03 0.248 0.0908 0.387 CD4_TCM L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.80e-01 0.00203 0.0819 0.387 CD4_TCM L2
ENSG00000125703 ATG4C -357721 sc-eQTL 7.81e-01 -0.0222 0.0797 0.387 CD4_TCM L2
ENSG00000132849 PATJ 684005 sc-eQTL 3.14e-01 -0.0644 0.0638 0.387 CD4_TCM L2
ENSG00000162604 TM2D1 700988 sc-eQTL 8.02e-01 -0.0187 0.0746 0.387 CD4_TCM L2
ENSG00000162607 USP1 -9886 sc-eQTL 6.65e-01 0.0334 0.077 0.387 CD4_TCM L2
ENSG00000088035 ALG6 -941164 sc-eQTL 2.95e-01 0.1 0.0953 0.387 CD4_TEM L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 5.28e-01 -0.0588 0.0931 0.387 CD4_TEM L2
ENSG00000125703 ATG4C -357721 sc-eQTL 6.23e-01 -0.0445 0.0904 0.387 CD4_TEM L2
ENSG00000132849 PATJ 684005 sc-eQTL 7.88e-01 -0.0227 0.0843 0.387 CD4_TEM L2
ENSG00000162604 TM2D1 700988 sc-eQTL 1.10e-01 -0.142 0.0883 0.387 CD4_TEM L2
ENSG00000162607 USP1 -9886 sc-eQTL 4.01e-01 -0.0743 0.0883 0.387 CD4_TEM L2
ENSG00000088035 ALG6 -941164 sc-eQTL 2.87e-01 0.0968 0.0908 0.387 CD8_CTL L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.46e-01 -0.00583 0.0864 0.387 CD8_CTL L2
ENSG00000125703 ATG4C -357721 sc-eQTL 1.53e-02 -0.222 0.0907 0.387 CD8_CTL L2
ENSG00000132849 PATJ 684005 sc-eQTL 9.87e-01 -0.00144 0.0871 0.387 CD8_CTL L2
ENSG00000162604 TM2D1 700988 sc-eQTL 2.14e-01 0.0991 0.0796 0.387 CD8_CTL L2
ENSG00000162607 USP1 -9886 sc-eQTL 5.79e-01 -0.0475 0.0856 0.387 CD8_CTL L2
ENSG00000088035 ALG6 -941164 sc-eQTL 2.02e-01 0.113 0.0882 0.387 CD8_Naive L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 8.45e-01 -0.0179 0.0915 0.387 CD8_Naive L2
ENSG00000125703 ATG4C -357721 sc-eQTL 2.29e-01 -0.106 0.0876 0.387 CD8_Naive L2
ENSG00000132849 PATJ 684005 sc-eQTL 5.47e-01 -0.0405 0.0671 0.387 CD8_Naive L2
ENSG00000162604 TM2D1 700988 sc-eQTL 8.05e-01 0.0203 0.0821 0.387 CD8_Naive L2
ENSG00000162607 USP1 -9886 sc-eQTL 5.20e-01 -0.0485 0.0752 0.387 CD8_Naive L2
ENSG00000088035 ALG6 -941164 sc-eQTL 6.16e-01 0.0495 0.0987 0.389 CD8_TCM L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 4.75e-01 -0.0689 0.0962 0.389 CD8_TCM L2
ENSG00000125703 ATG4C -357721 sc-eQTL 7.85e-01 -0.027 0.0985 0.389 CD8_TCM L2
ENSG00000132849 PATJ 684005 sc-eQTL 8.00e-01 -0.023 0.0906 0.389 CD8_TCM L2
ENSG00000162604 TM2D1 700988 sc-eQTL 4.65e-01 -0.0673 0.0921 0.389 CD8_TCM L2
ENSG00000162607 USP1 -9886 sc-eQTL 3.72e-01 0.0822 0.092 0.389 CD8_TCM L2
ENSG00000088035 ALG6 -941164 sc-eQTL 7.21e-01 -0.0346 0.0968 0.39 CD8_TEM L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 7.29e-01 -0.0326 0.0938 0.39 CD8_TEM L2
ENSG00000125703 ATG4C -357721 sc-eQTL 9.49e-01 -0.00575 0.0902 0.39 CD8_TEM L2
ENSG00000132849 PATJ 684005 sc-eQTL 1.32e-01 -0.137 0.0908 0.39 CD8_TEM L2
ENSG00000162604 TM2D1 700988 sc-eQTL 3.05e-01 0.0953 0.0928 0.39 CD8_TEM L2
ENSG00000162607 USP1 -9886 sc-eQTL 3.65e-01 0.0844 0.093 0.39 CD8_TEM L2
ENSG00000088035 ALG6 -941164 sc-eQTL 7.06e-01 -0.0336 0.0889 0.39 MAIT L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 5.40e-01 0.0523 0.0852 0.39 MAIT L2
ENSG00000125703 ATG4C -357721 sc-eQTL 5.30e-01 -0.0565 0.0898 0.39 MAIT L2
ENSG00000132849 PATJ 684005 sc-eQTL 2.59e-01 0.0858 0.0758 0.39 MAIT L2
ENSG00000162604 TM2D1 700988 sc-eQTL 4.80e-01 -0.0611 0.0863 0.39 MAIT L2
ENSG00000162607 USP1 -9886 sc-eQTL 8.64e-01 -0.0154 0.0893 0.39 MAIT L2
ENSG00000088035 ALG6 -941164 sc-eQTL 8.80e-01 0.0142 0.0942 0.382 NK_CD56bright L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 1.13e-01 -0.129 0.0811 0.382 NK_CD56bright L2
ENSG00000125703 ATG4C -357721 sc-eQTL 7.42e-01 0.0301 0.0912 0.382 NK_CD56bright L2
ENSG00000132849 PATJ 684005 sc-eQTL 1.95e-01 0.116 0.089 0.382 NK_CD56bright L2
ENSG00000162604 TM2D1 700988 sc-eQTL 9.87e-01 0.00151 0.091 0.382 NK_CD56bright L2
ENSG00000162607 USP1 -9886 sc-eQTL 5.43e-01 -0.0597 0.0978 0.382 NK_CD56bright L2
ENSG00000088035 ALG6 -941164 sc-eQTL 8.77e-01 0.0143 0.092 0.386 NK_CD56dim L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 1.54e-04 -0.298 0.0773 0.386 NK_CD56dim L2
ENSG00000125703 ATG4C -357721 sc-eQTL 8.22e-01 -0.0183 0.0813 0.386 NK_CD56dim L2
ENSG00000132849 PATJ 684005 sc-eQTL 3.00e-01 0.0913 0.0879 0.386 NK_CD56dim L2
ENSG00000162604 TM2D1 700988 sc-eQTL 5.31e-01 -0.0525 0.0836 0.386 NK_CD56dim L2
ENSG00000162607 USP1 -9886 sc-eQTL 7.38e-01 0.0301 0.0897 0.386 NK_CD56dim L2
ENSG00000088035 ALG6 -941164 sc-eQTL 3.05e-01 0.106 0.103 0.386 NK_HLA L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 5.88e-01 -0.0428 0.079 0.386 NK_HLA L2
ENSG00000125703 ATG4C -357721 sc-eQTL 8.00e-01 0.0234 0.0919 0.386 NK_HLA L2
ENSG00000132849 PATJ 684005 sc-eQTL 7.71e-01 0.0249 0.0853 0.386 NK_HLA L2
ENSG00000162604 TM2D1 700988 sc-eQTL 3.81e-01 -0.085 0.0967 0.386 NK_HLA L2
ENSG00000162607 USP1 -9886 sc-eQTL 6.03e-01 0.0526 0.101 0.386 NK_HLA L2
ENSG00000088035 ALG6 -941164 sc-eQTL 5.83e-01 -0.0496 0.09 0.386 NK_cytokine L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 4.50e-02 -0.167 0.0827 0.386 NK_cytokine L2
ENSG00000125703 ATG4C -357721 sc-eQTL 3.91e-01 -0.0733 0.0852 0.386 NK_cytokine L2
ENSG00000132849 PATJ 684005 sc-eQTL 8.92e-01 -0.0123 0.0901 0.386 NK_cytokine L2
ENSG00000162604 TM2D1 700988 sc-eQTL 8.82e-01 0.0131 0.0881 0.386 NK_cytokine L2
ENSG00000162607 USP1 -9886 sc-eQTL 6.91e-01 0.037 0.0929 0.386 NK_cytokine L2
ENSG00000088035 ALG6 -941164 sc-eQTL 8.99e-01 0.0157 0.123 0.389 PB L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 2.51e-01 -0.151 0.131 0.389 PB L2
ENSG00000125703 ATG4C -357721 sc-eQTL 9.77e-01 -0.00325 0.115 0.389 PB L2
ENSG00000132849 PATJ 684005 sc-eQTL 5.53e-01 -0.0707 0.119 0.389 PB L2
ENSG00000162604 TM2D1 700988 sc-eQTL 3.03e-01 0.119 0.115 0.389 PB L2
ENSG00000162607 USP1 -9886 sc-eQTL 8.61e-01 -0.02 0.114 0.389 PB L2
ENSG00000088035 ALG6 -941164 sc-eQTL 3.02e-01 -0.0906 0.0875 0.387 Pro_T L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.62e-01 -0.00419 0.0881 0.387 Pro_T L2
ENSG00000125703 ATG4C -357721 sc-eQTL 8.58e-01 0.0138 0.0771 0.387 Pro_T L2
ENSG00000132849 PATJ 684005 sc-eQTL 6.49e-01 0.0384 0.0841 0.387 Pro_T L2
ENSG00000162604 TM2D1 700988 sc-eQTL 5.85e-01 0.0515 0.0942 0.387 Pro_T L2
ENSG00000162607 USP1 -9886 sc-eQTL 6.51e-01 -0.0241 0.0531 0.387 Pro_T L2
ENSG00000088035 ALG6 -941164 sc-eQTL 3.86e-01 -0.0843 0.0972 0.387 Treg L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 5.59e-02 -0.17 0.0886 0.387 Treg L2
ENSG00000125703 ATG4C -357721 sc-eQTL 2.12e-01 -0.114 0.091 0.387 Treg L2
ENSG00000132849 PATJ 684005 sc-eQTL 3.52e-01 0.0788 0.0844 0.387 Treg L2
ENSG00000162604 TM2D1 700988 sc-eQTL 4.01e-01 -0.0783 0.093 0.387 Treg L2
ENSG00000162607 USP1 -9886 sc-eQTL 5.00e-01 0.0624 0.0923 0.387 Treg L2
ENSG00000088035 ALG6 -941164 sc-eQTL 7.42e-01 0.0304 0.0921 0.388 cDC L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 8.93e-02 -0.153 0.0897 0.388 cDC L2
ENSG00000125703 ATG4C -357721 sc-eQTL 2.60e-01 -0.0885 0.0783 0.388 cDC L2
ENSG00000162604 TM2D1 700988 sc-eQTL 2.25e-01 -0.119 0.0978 0.388 cDC L2
ENSG00000162607 USP1 -9886 sc-eQTL 9.81e-01 0.00206 0.0886 0.388 cDC L2
ENSG00000088035 ALG6 -941164 sc-eQTL 7.25e-01 -0.0299 0.0849 0.387 cMono_IL1B L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 6.40e-01 0.0419 0.0895 0.387 cMono_IL1B L2
ENSG00000125703 ATG4C -357721 sc-eQTL 4.07e-01 -0.0522 0.0629 0.387 cMono_IL1B L2
ENSG00000162604 TM2D1 700988 sc-eQTL 3.65e-01 0.0588 0.0648 0.387 cMono_IL1B L2
ENSG00000162607 USP1 -9886 sc-eQTL 8.02e-01 0.0197 0.0787 0.387 cMono_IL1B L2
ENSG00000240563 L1TD1 231562 sc-eQTL 4.99e-01 0.0535 0.079 0.387 cMono_IL1B L2
ENSG00000088035 ALG6 -941164 sc-eQTL 8.19e-01 -0.0217 0.095 0.387 cMono_S100A L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 4.23e-01 -0.0707 0.088 0.387 cMono_S100A L2
ENSG00000125703 ATG4C -357721 sc-eQTL 8.82e-01 0.0113 0.0763 0.387 cMono_S100A L2
ENSG00000162604 TM2D1 700988 sc-eQTL 9.23e-01 -0.00752 0.0778 0.387 cMono_S100A L2
ENSG00000162607 USP1 -9886 sc-eQTL 2.94e-01 -0.0929 0.0883 0.387 cMono_S100A L2
ENSG00000240563 L1TD1 231562 sc-eQTL 7.05e-01 -0.028 0.0737 0.387 cMono_S100A L2
ENSG00000088035 ALG6 -941164 sc-eQTL 6.75e-02 0.206 0.112 0.382 gdT L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 3.90e-01 -0.0955 0.111 0.382 gdT L2
ENSG00000125703 ATG4C -357721 sc-eQTL 2.25e-01 0.129 0.106 0.382 gdT L2
ENSG00000132849 PATJ 684005 sc-eQTL 7.50e-01 -0.0331 0.104 0.382 gdT L2
ENSG00000162604 TM2D1 700988 sc-eQTL 4.84e-02 -0.214 0.108 0.382 gdT L2
ENSG00000162607 USP1 -9886 sc-eQTL 8.05e-01 -0.0264 0.107 0.382 gdT L2
ENSG00000088035 ALG6 -941164 sc-eQTL 1.82e-01 0.118 0.0882 0.387 intMono L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 8.44e-01 0.0178 0.0905 0.387 intMono L2
ENSG00000125703 ATG4C -357721 sc-eQTL 3.80e-01 0.0759 0.0862 0.387 intMono L2
ENSG00000162604 TM2D1 700988 sc-eQTL 5.15e-01 -0.0596 0.0914 0.387 intMono L2
ENSG00000162607 USP1 -9886 sc-eQTL 7.41e-01 0.032 0.0967 0.387 intMono L2
ENSG00000240563 L1TD1 231562 sc-eQTL 6.89e-01 0.0285 0.0711 0.387 intMono L2
ENSG00000088035 ALG6 -941164 sc-eQTL 1.93e-01 -0.123 0.094 0.378 ncMono L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.11e-01 0.0104 0.0929 0.378 ncMono L2
ENSG00000125703 ATG4C -357721 sc-eQTL 7.77e-01 0.0246 0.0868 0.378 ncMono L2
ENSG00000162604 TM2D1 700988 sc-eQTL 8.47e-02 0.161 0.0929 0.378 ncMono L2
ENSG00000162607 USP1 -9886 sc-eQTL 4.43e-01 -0.0713 0.0926 0.378 ncMono L2
ENSG00000240563 L1TD1 231562 sc-eQTL 5.01e-02 0.128 0.0652 0.378 ncMono L2
ENSG00000088035 ALG6 -941164 sc-eQTL 7.27e-01 0.0336 0.0962 0.381 pDC L2
ENSG00000116641 DOCK7 -261975 sc-eQTL 1.10e-01 0.157 0.0975 0.381 pDC L2
ENSG00000125703 ATG4C -357721 sc-eQTL 6.85e-01 -0.0358 0.0882 0.381 pDC L2
ENSG00000162604 TM2D1 700988 sc-eQTL 1.52e-01 -0.124 0.0858 0.381 pDC L2
ENSG00000162607 USP1 -9886 sc-eQTL 7.52e-01 0.0319 0.101 0.381 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -941164 sc-eQTL 3.76e-01 -0.0858 0.0967 0.387 B_Memory LOneK1K
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.05e-01 -0.01 0.0841 0.387 B_Memory LOneK1K
ENSG00000125703 ATG4C -357721 sc-eQTL 1.52e-01 0.0972 0.0677 0.387 B_Memory LOneK1K
ENSG00000132849 PATJ 684005 sc-eQTL 6.72e-01 -0.0319 0.0753 0.387 B_Memory LOneK1K
ENSG00000162604 TM2D1 700988 sc-eQTL 2.46e-01 0.0992 0.0852 0.387 B_Memory LOneK1K
ENSG00000162607 USP1 -9886 sc-eQTL 6.12e-01 -0.044 0.0867 0.387 B_Memory LOneK1K
ENSG00000088035 ALG6 -941164 sc-eQTL 3.29e-01 0.0921 0.0942 0.387 B_Naive LOneK1K
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.10e-01 0.01 0.0882 0.387 B_Naive LOneK1K
ENSG00000125703 ATG4C -357721 sc-eQTL 2.03e-01 -0.0857 0.067 0.387 B_Naive LOneK1K
ENSG00000132849 PATJ 684005 sc-eQTL 7.23e-01 -0.0286 0.0805 0.387 B_Naive LOneK1K
ENSG00000162604 TM2D1 700988 sc-eQTL 4.02e-01 0.0644 0.0767 0.387 B_Naive LOneK1K
ENSG00000162607 USP1 -9886 sc-eQTL 9.24e-02 0.137 0.0812 0.387 B_Naive LOneK1K
ENSG00000088035 ALG6 -941164 sc-eQTL 7.35e-01 -0.0284 0.0837 0.387 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -261975 sc-eQTL 9.20e-01 0.00846 0.0843 0.387 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -357721 sc-eQTL 4.30e-01 -0.0461 0.0582 0.387 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 700988 sc-eQTL 4.72e-01 0.0437 0.0607 0.387 CD14_Mono LOneK1K
ENSG00000162607 USP1 -9886 sc-eQTL 6.80e-01 -0.0304 0.0736 0.387 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 231562 sc-eQTL 7.66e-01 0.0238 0.0798 0.387 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -941164 sc-eQTL 8.41e-01 0.0189 0.0941 0.384 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -261975 sc-eQTL 7.01e-01 0.0358 0.0931 0.384 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -357721 sc-eQTL 3.36e-01 0.0765 0.0792 0.384 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 700988 sc-eQTL 4.45e-01 0.071 0.0927 0.384 CD16_Mono LOneK1K
ENSG00000162607 USP1 -9886 sc-eQTL 4.23e-01 0.0695 0.0865 0.384 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 231562 sc-eQTL 1.32e-01 0.0889 0.0588 0.384 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -941164 sc-eQTL 8.55e-01 0.0156 0.0852 0.386 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -261975 sc-eQTL 2.17e-04 -0.278 0.0739 0.386 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -357721 sc-eQTL 6.89e-01 -0.0305 0.0762 0.386 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 684005 sc-eQTL 3.21e-01 0.0816 0.082 0.386 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 700988 sc-eQTL 9.39e-01 -0.00574 0.0753 0.386 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -9886 sc-eQTL 2.26e-01 0.0992 0.0817 0.386 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -261957 eQTL 0.378 -0.0208 0.0236 0.0137 0.0445 0.373
ENSG00000125703 ATG4C -357721 eQTL 0.048 -0.0354 0.0179 0.0 0.0 0.373
ENSG00000132855 ANGPTL3 -171076 pQTL 0.00123 -0.101 0.0312 0.0 0.0 0.378
ENSG00000162607 USP1 -9886 eQTL 0.00977 -0.0355 0.0137 0.0 0.0 0.373

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000132849 \N 684005 4.65e-06 2.1e-06 2.7e-07 2.02e-06 1.14e-07 8e-07 1.49e-06 2.74e-07 1.49e-06 3.46e-07 2.01e-06 6.43e-07 2.46e-06 2.76e-07 4.16e-07 9.16e-07 7.68e-07 1.06e-06 4.82e-07 3.57e-07 5.66e-07 1.89e-06 8.31e-07 2.68e-07 1.64e-06 3.28e-07 6.16e-07 5.31e-07 1.48e-06 1.24e-06 6.29e-07 3.68e-08 5.95e-08 7.03e-07 1.61e-06 2.91e-07 1.02e-07 1.54e-07 1.23e-07 1.63e-08 4.42e-08 3.26e-06 7.37e-08 1.24e-08 5.32e-08 1.38e-07 1.1e-07 0.0 4.61e-08
ENSG00000162607 USP1 -9886 0.00016 0.000154 4.08e-05 7.33e-05 4.33e-05 7.02e-05 0.0002 4.76e-05 0.000186 0.000124 0.000262 0.000108 0.000248 7.79e-05 4.28e-05 0.000181 9.83e-05 0.000143 4.47e-05 4.28e-05 0.000109 0.00024 0.00017 6.65e-05 0.000244 6.59e-05 0.000107 9.12e-05 0.000169 9.55e-05 0.000135 2.21e-05 3.19e-05 4.51e-05 6.84e-05 3.79e-05 2.58e-05 2.85e-05 3.06e-05 2.78e-05 1.59e-05 0.000191 2.14e-05 3.66e-06 1.88e-05 3.16e-05 2.95e-05 1.87e-05 1.38e-05