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Genes within 1Mb (chr1:62380716:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -986859 sc-eQTL 3.21e-01 0.0823 0.0827 0.451 B L1
ENSG00000116641 DOCK7 -307670 sc-eQTL 9.27e-01 -0.00758 0.0829 0.451 B L1
ENSG00000125703 ATG4C -403416 sc-eQTL 5.33e-01 -0.036 0.0576 0.451 B L1
ENSG00000132849 PATJ 638310 sc-eQTL 4.39e-02 -0.14 0.0693 0.451 B L1
ENSG00000162604 TM2D1 655293 sc-eQTL 3.52e-01 0.0651 0.0697 0.451 B L1
ENSG00000162607 USP1 -55581 sc-eQTL 5.56e-01 -0.047 0.0795 0.451 B L1
ENSG00000088035 ALG6 -986859 sc-eQTL 2.55e-01 0.0872 0.0763 0.451 CD4T L1
ENSG00000116641 DOCK7 -307670 sc-eQTL 3.75e-01 0.0687 0.0774 0.451 CD4T L1
ENSG00000125703 ATG4C -403416 sc-eQTL 3.41e-01 -0.0596 0.0624 0.451 CD4T L1
ENSG00000132849 PATJ 638310 sc-eQTL 3.32e-02 -0.108 0.0502 0.451 CD4T L1
ENSG00000162604 TM2D1 655293 sc-eQTL 3.82e-01 -0.054 0.0616 0.451 CD4T L1
ENSG00000162607 USP1 -55581 sc-eQTL 8.68e-01 -0.0101 0.0607 0.451 CD4T L1
ENSG00000088035 ALG6 -986859 sc-eQTL 6.34e-01 0.0402 0.0843 0.451 CD8T L1
ENSG00000116641 DOCK7 -307670 sc-eQTL 9.37e-01 -0.00671 0.0854 0.451 CD8T L1
ENSG00000125703 ATG4C -403416 sc-eQTL 4.84e-01 -0.0568 0.081 0.451 CD8T L1
ENSG00000132849 PATJ 638310 sc-eQTL 5.10e-01 -0.0326 0.0494 0.451 CD8T L1
ENSG00000162604 TM2D1 655293 sc-eQTL 5.05e-01 0.0496 0.0742 0.451 CD8T L1
ENSG00000162607 USP1 -55581 sc-eQTL 4.65e-01 0.0517 0.0706 0.451 CD8T L1
ENSG00000088035 ALG6 -986859 sc-eQTL 2.91e-01 0.0926 0.0874 0.457 DC L1
ENSG00000116641 DOCK7 -307670 sc-eQTL 8.22e-01 0.0202 0.0898 0.457 DC L1
ENSG00000125703 ATG4C -403416 sc-eQTL 8.94e-01 0.0094 0.0703 0.457 DC L1
ENSG00000162604 TM2D1 655293 sc-eQTL 8.13e-02 -0.142 0.0813 0.457 DC L1
ENSG00000162607 USP1 -55581 sc-eQTL 8.23e-01 -0.0192 0.0858 0.457 DC L1
ENSG00000088035 ALG6 -986859 sc-eQTL 3.03e-01 0.0896 0.0867 0.451 Mono L1
ENSG00000116641 DOCK7 -307670 sc-eQTL 2.18e-02 0.192 0.0831 0.451 Mono L1
ENSG00000125703 ATG4C -403416 sc-eQTL 2.85e-01 -0.0608 0.0567 0.451 Mono L1
ENSG00000162604 TM2D1 655293 sc-eQTL 2.24e-01 -0.0766 0.0629 0.451 Mono L1
ENSG00000162607 USP1 -55581 sc-eQTL 1.50e-01 -0.106 0.0734 0.451 Mono L1
ENSG00000240563 L1TD1 185867 sc-eQTL 7.05e-01 0.0261 0.0688 0.451 Mono L1
ENSG00000088035 ALG6 -986859 sc-eQTL 9.30e-02 0.139 0.0826 0.451 NK L1
ENSG00000116641 DOCK7 -307670 sc-eQTL 1.97e-01 -0.0884 0.0682 0.451 NK L1
ENSG00000125703 ATG4C -403416 sc-eQTL 7.47e-01 0.0237 0.0735 0.451 NK L1
ENSG00000132849 PATJ 638310 sc-eQTL 7.14e-01 0.0265 0.0721 0.451 NK L1
ENSG00000162604 TM2D1 655293 sc-eQTL 4.51e-01 0.0556 0.0737 0.451 NK L1
ENSG00000162607 USP1 -55581 sc-eQTL 8.79e-01 0.0124 0.0817 0.451 NK L1
ENSG00000088035 ALG6 -986859 sc-eQTL 5.47e-01 0.0482 0.08 0.451 Other_T L1
ENSG00000116641 DOCK7 -307670 sc-eQTL 1.19e-01 -0.127 0.0813 0.451 Other_T L1
ENSG00000125703 ATG4C -403416 sc-eQTL 7.88e-01 -0.0191 0.0707 0.451 Other_T L1
ENSG00000132849 PATJ 638310 sc-eQTL 4.98e-01 0.0447 0.0658 0.451 Other_T L1
ENSG00000162604 TM2D1 655293 sc-eQTL 9.34e-01 0.0064 0.0773 0.451 Other_T L1
ENSG00000162607 USP1 -55581 sc-eQTL 5.67e-01 -0.0311 0.0543 0.451 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -986859 sc-eQTL 1.93e-01 -0.133 0.101 0.444 B_Activated L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 2.52e-02 0.211 0.0935 0.444 B_Activated L2
ENSG00000125703 ATG4C -403416 sc-eQTL 8.84e-01 0.0146 0.0998 0.444 B_Activated L2
ENSG00000132849 PATJ 638310 sc-eQTL 7.13e-01 0.0312 0.0848 0.444 B_Activated L2
ENSG00000162604 TM2D1 655293 sc-eQTL 2.54e-02 0.239 0.106 0.444 B_Activated L2
ENSG00000162607 USP1 -55581 sc-eQTL 7.78e-01 0.0299 0.106 0.444 B_Activated L2
ENSG00000088035 ALG6 -986859 sc-eQTL 7.41e-01 -0.0319 0.0967 0.448 B_Intermediate L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 7.71e-01 -0.0269 0.0923 0.448 B_Intermediate L2
ENSG00000125703 ATG4C -403416 sc-eQTL 9.03e-01 -0.00952 0.0782 0.448 B_Intermediate L2
ENSG00000132849 PATJ 638310 sc-eQTL 2.01e-02 -0.196 0.0836 0.448 B_Intermediate L2
ENSG00000162604 TM2D1 655293 sc-eQTL 5.73e-01 -0.0501 0.0888 0.448 B_Intermediate L2
ENSG00000162607 USP1 -55581 sc-eQTL 9.23e-01 0.009 0.093 0.448 B_Intermediate L2
ENSG00000088035 ALG6 -986859 sc-eQTL 1.34e-01 0.142 0.0945 0.453 B_Memory L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 3.68e-01 0.0803 0.089 0.453 B_Memory L2
ENSG00000125703 ATG4C -403416 sc-eQTL 6.78e-01 0.0352 0.0847 0.453 B_Memory L2
ENSG00000132849 PATJ 638310 sc-eQTL 1.64e-01 -0.118 0.0842 0.453 B_Memory L2
ENSG00000162604 TM2D1 655293 sc-eQTL 6.30e-01 0.0458 0.095 0.453 B_Memory L2
ENSG00000162607 USP1 -55581 sc-eQTL 1.84e-01 -0.13 0.0974 0.453 B_Memory L2
ENSG00000088035 ALG6 -986859 sc-eQTL 6.25e-01 0.0468 0.0955 0.451 B_Naive1 L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.86e-01 0.0499 0.0915 0.451 B_Naive1 L2
ENSG00000125703 ATG4C -403416 sc-eQTL 4.48e-01 -0.0536 0.0705 0.451 B_Naive1 L2
ENSG00000132849 PATJ 638310 sc-eQTL 5.02e-01 -0.0609 0.0906 0.451 B_Naive1 L2
ENSG00000162604 TM2D1 655293 sc-eQTL 4.74e-01 -0.0597 0.0833 0.451 B_Naive1 L2
ENSG00000162607 USP1 -55581 sc-eQTL 3.81e-01 0.0721 0.0822 0.451 B_Naive1 L2
ENSG00000088035 ALG6 -986859 sc-eQTL 1.50e-01 0.139 0.0963 0.453 B_Naive2 L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.99e-01 -0.049 0.093 0.453 B_Naive2 L2
ENSG00000125703 ATG4C -403416 sc-eQTL 6.68e-01 -0.0385 0.0896 0.453 B_Naive2 L2
ENSG00000132849 PATJ 638310 sc-eQTL 6.53e-01 -0.0412 0.0917 0.453 B_Naive2 L2
ENSG00000162604 TM2D1 655293 sc-eQTL 3.69e-02 0.193 0.0918 0.453 B_Naive2 L2
ENSG00000162607 USP1 -55581 sc-eQTL 4.98e-01 -0.0628 0.0924 0.453 B_Naive2 L2
ENSG00000088035 ALG6 -986859 sc-eQTL 4.26e-01 0.0803 0.101 0.452 CD4_CTL L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 3.66e-01 -0.0796 0.088 0.452 CD4_CTL L2
ENSG00000125703 ATG4C -403416 sc-eQTL 9.67e-01 -0.00372 0.0912 0.452 CD4_CTL L2
ENSG00000132849 PATJ 638310 sc-eQTL 6.91e-01 0.0291 0.073 0.452 CD4_CTL L2
ENSG00000162604 TM2D1 655293 sc-eQTL 6.27e-01 -0.0454 0.0933 0.452 CD4_CTL L2
ENSG00000162607 USP1 -55581 sc-eQTL 5.53e-01 -0.0551 0.0928 0.452 CD4_CTL L2
ENSG00000088035 ALG6 -986859 sc-eQTL 8.65e-01 -0.0144 0.0846 0.451 CD4_Naive L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 1.28e-01 0.126 0.0827 0.451 CD4_Naive L2
ENSG00000125703 ATG4C -403416 sc-eQTL 3.28e-01 -0.0719 0.0733 0.451 CD4_Naive L2
ENSG00000132849 PATJ 638310 sc-eQTL 1.54e-01 -0.0735 0.0513 0.451 CD4_Naive L2
ENSG00000162604 TM2D1 655293 sc-eQTL 2.32e-01 -0.0886 0.074 0.451 CD4_Naive L2
ENSG00000162607 USP1 -55581 sc-eQTL 7.43e-01 0.0225 0.0686 0.451 CD4_Naive L2
ENSG00000088035 ALG6 -986859 sc-eQTL 2.39e-02 0.211 0.0928 0.451 CD4_TCM L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.92e-01 0.0447 0.0832 0.451 CD4_TCM L2
ENSG00000125703 ATG4C -403416 sc-eQTL 3.26e-01 -0.0796 0.0808 0.451 CD4_TCM L2
ENSG00000132849 PATJ 638310 sc-eQTL 3.48e-01 -0.061 0.0649 0.451 CD4_TCM L2
ENSG00000162604 TM2D1 655293 sc-eQTL 3.36e-01 0.0729 0.0757 0.451 CD4_TCM L2
ENSG00000162607 USP1 -55581 sc-eQTL 9.62e-01 -0.00375 0.0783 0.451 CD4_TCM L2
ENSG00000088035 ALG6 -986859 sc-eQTL 1.27e-01 0.146 0.0954 0.451 CD4_TEM L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.76e-01 0.0524 0.0934 0.451 CD4_TEM L2
ENSG00000125703 ATG4C -403416 sc-eQTL 5.44e-01 -0.0552 0.0907 0.451 CD4_TEM L2
ENSG00000132849 PATJ 638310 sc-eQTL 3.65e-02 -0.176 0.0838 0.451 CD4_TEM L2
ENSG00000162604 TM2D1 655293 sc-eQTL 6.94e-01 -0.0351 0.0891 0.451 CD4_TEM L2
ENSG00000162607 USP1 -55581 sc-eQTL 5.96e-01 -0.0472 0.0887 0.451 CD4_TEM L2
ENSG00000088035 ALG6 -986859 sc-eQTL 9.85e-01 0.00168 0.0913 0.451 CD8_CTL L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 1.03e-01 -0.141 0.0861 0.451 CD8_CTL L2
ENSG00000125703 ATG4C -403416 sc-eQTL 2.59e-01 -0.104 0.0919 0.451 CD8_CTL L2
ENSG00000132849 PATJ 638310 sc-eQTL 5.85e-01 -0.0477 0.0873 0.451 CD8_CTL L2
ENSG00000162604 TM2D1 655293 sc-eQTL 7.23e-01 0.0284 0.0801 0.451 CD8_CTL L2
ENSG00000162607 USP1 -55581 sc-eQTL 9.19e-01 0.00871 0.0859 0.451 CD8_CTL L2
ENSG00000088035 ALG6 -986859 sc-eQTL 3.16e-01 0.0915 0.091 0.451 CD8_Naive L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 2.06e-02 0.217 0.0931 0.451 CD8_Naive L2
ENSG00000125703 ATG4C -403416 sc-eQTL 2.23e-01 -0.11 0.0902 0.451 CD8_Naive L2
ENSG00000132849 PATJ 638310 sc-eQTL 3.75e-01 -0.0615 0.0691 0.451 CD8_Naive L2
ENSG00000162604 TM2D1 655293 sc-eQTL 8.92e-01 -0.0115 0.0845 0.451 CD8_Naive L2
ENSG00000162607 USP1 -55581 sc-eQTL 3.00e-01 0.0803 0.0773 0.451 CD8_Naive L2
ENSG00000088035 ALG6 -986859 sc-eQTL 6.46e-01 -0.0447 0.0971 0.465 CD8_TCM L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 3.78e-01 -0.0837 0.0946 0.465 CD8_TCM L2
ENSG00000125703 ATG4C -403416 sc-eQTL 6.20e-01 0.0481 0.0969 0.465 CD8_TCM L2
ENSG00000132849 PATJ 638310 sc-eQTL 7.03e-01 -0.0341 0.0892 0.465 CD8_TCM L2
ENSG00000162604 TM2D1 655293 sc-eQTL 2.88e-01 0.0964 0.0904 0.465 CD8_TCM L2
ENSG00000162607 USP1 -55581 sc-eQTL 8.96e-01 -0.0119 0.0907 0.465 CD8_TCM L2
ENSG00000088035 ALG6 -986859 sc-eQTL 3.38e-01 -0.0961 0.1 0.441 CD8_TEM L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 3.48e-01 -0.0912 0.097 0.441 CD8_TEM L2
ENSG00000125703 ATG4C -403416 sc-eQTL 5.65e-01 0.0538 0.0933 0.441 CD8_TEM L2
ENSG00000132849 PATJ 638310 sc-eQTL 7.62e-01 -0.0287 0.0946 0.441 CD8_TEM L2
ENSG00000162604 TM2D1 655293 sc-eQTL 6.39e-01 -0.0453 0.0963 0.441 CD8_TEM L2
ENSG00000162607 USP1 -55581 sc-eQTL 3.53e-01 0.0897 0.0963 0.441 CD8_TEM L2
ENSG00000088035 ALG6 -986859 sc-eQTL 1.47e-01 0.132 0.0903 0.452 MAIT L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.35e-01 0.054 0.0869 0.452 MAIT L2
ENSG00000125703 ATG4C -403416 sc-eQTL 6.13e-01 -0.0464 0.0916 0.452 MAIT L2
ENSG00000132849 PATJ 638310 sc-eQTL 7.44e-01 0.0253 0.0775 0.452 MAIT L2
ENSG00000162604 TM2D1 655293 sc-eQTL 3.32e-01 -0.0856 0.088 0.452 MAIT L2
ENSG00000162607 USP1 -55581 sc-eQTL 6.20e-01 -0.0452 0.0911 0.452 MAIT L2
ENSG00000088035 ALG6 -986859 sc-eQTL 6.48e-01 -0.0439 0.0959 0.447 NK_CD56bright L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 6.66e-01 -0.0359 0.0831 0.447 NK_CD56bright L2
ENSG00000125703 ATG4C -403416 sc-eQTL 7.69e-01 0.0274 0.0929 0.447 NK_CD56bright L2
ENSG00000132849 PATJ 638310 sc-eQTL 8.38e-01 0.0186 0.0911 0.447 NK_CD56bright L2
ENSG00000162604 TM2D1 655293 sc-eQTL 7.36e-01 -0.0313 0.0926 0.447 NK_CD56bright L2
ENSG00000162607 USP1 -55581 sc-eQTL 8.02e-01 -0.025 0.0997 0.447 NK_CD56bright L2
ENSG00000088035 ALG6 -986859 sc-eQTL 1.74e-03 0.29 0.0915 0.453 NK_CD56dim L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 9.56e-01 -0.00454 0.0815 0.453 NK_CD56dim L2
ENSG00000125703 ATG4C -403416 sc-eQTL 2.77e-01 0.0899 0.0825 0.453 NK_CD56dim L2
ENSG00000132849 PATJ 638310 sc-eQTL 7.11e-01 0.0333 0.0897 0.453 NK_CD56dim L2
ENSG00000162604 TM2D1 655293 sc-eQTL 5.21e-01 0.0547 0.0851 0.453 NK_CD56dim L2
ENSG00000162607 USP1 -55581 sc-eQTL 3.61e-01 0.0834 0.0912 0.453 NK_CD56dim L2
ENSG00000088035 ALG6 -986859 sc-eQTL 6.63e-01 -0.0455 0.104 0.445 NK_HLA L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 4.33e-02 -0.16 0.0789 0.445 NK_HLA L2
ENSG00000125703 ATG4C -403416 sc-eQTL 4.78e-01 -0.0658 0.0926 0.445 NK_HLA L2
ENSG00000132849 PATJ 638310 sc-eQTL 4.70e-01 0.0622 0.0859 0.445 NK_HLA L2
ENSG00000162604 TM2D1 655293 sc-eQTL 2.40e-01 -0.115 0.0974 0.445 NK_HLA L2
ENSG00000162607 USP1 -55581 sc-eQTL 4.22e-01 -0.0819 0.102 0.445 NK_HLA L2
ENSG00000088035 ALG6 -986859 sc-eQTL 6.91e-01 -0.036 0.0904 0.453 NK_cytokine L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 9.49e-01 -0.00536 0.0838 0.453 NK_cytokine L2
ENSG00000125703 ATG4C -403416 sc-eQTL 6.02e-01 -0.0448 0.0856 0.453 NK_cytokine L2
ENSG00000132849 PATJ 638310 sc-eQTL 8.02e-01 0.0227 0.0904 0.453 NK_cytokine L2
ENSG00000162604 TM2D1 655293 sc-eQTL 9.68e-01 0.00352 0.0884 0.453 NK_cytokine L2
ENSG00000162607 USP1 -55581 sc-eQTL 2.25e-01 -0.113 0.093 0.453 NK_cytokine L2
ENSG00000088035 ALG6 -986859 sc-eQTL 2.67e-01 -0.14 0.126 0.463 PB L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 2.31e-01 -0.162 0.134 0.463 PB L2
ENSG00000125703 ATG4C -403416 sc-eQTL 5.30e-01 -0.074 0.118 0.463 PB L2
ENSG00000132849 PATJ 638310 sc-eQTL 3.60e-01 -0.112 0.122 0.463 PB L2
ENSG00000162604 TM2D1 655293 sc-eQTL 1.72e-01 0.162 0.118 0.463 PB L2
ENSG00000162607 USP1 -55581 sc-eQTL 3.45e-03 -0.336 0.113 0.463 PB L2
ENSG00000088035 ALG6 -986859 sc-eQTL 4.36e-01 0.0708 0.0908 0.45 Pro_T L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 9.04e-01 -0.011 0.0912 0.45 Pro_T L2
ENSG00000125703 ATG4C -403416 sc-eQTL 6.73e-01 0.0337 0.0798 0.45 Pro_T L2
ENSG00000132849 PATJ 638310 sc-eQTL 8.36e-01 0.0181 0.0871 0.45 Pro_T L2
ENSG00000162604 TM2D1 655293 sc-eQTL 8.66e-02 0.167 0.0969 0.45 Pro_T L2
ENSG00000162607 USP1 -55581 sc-eQTL 3.73e-01 0.0491 0.055 0.45 Pro_T L2
ENSG00000088035 ALG6 -986859 sc-eQTL 6.67e-01 0.0421 0.0976 0.451 Treg L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 3.06e-01 -0.0917 0.0895 0.451 Treg L2
ENSG00000125703 ATG4C -403416 sc-eQTL 4.16e-01 0.0746 0.0915 0.451 Treg L2
ENSG00000132849 PATJ 638310 sc-eQTL 7.35e-01 0.0288 0.0849 0.451 Treg L2
ENSG00000162604 TM2D1 655293 sc-eQTL 2.17e-01 -0.115 0.0932 0.451 Treg L2
ENSG00000162607 USP1 -55581 sc-eQTL 9.56e-01 0.00518 0.0927 0.451 Treg L2
ENSG00000088035 ALG6 -986859 sc-eQTL 9.59e-01 0.00466 0.0908 0.451 cDC L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.36e-01 -0.0552 0.089 0.451 cDC L2
ENSG00000125703 ATG4C -403416 sc-eQTL 8.26e-01 -0.017 0.0773 0.451 cDC L2
ENSG00000162604 TM2D1 655293 sc-eQTL 1.96e-01 -0.125 0.0962 0.451 cDC L2
ENSG00000162607 USP1 -55581 sc-eQTL 8.44e-01 0.0172 0.0873 0.451 cDC L2
ENSG00000088035 ALG6 -986859 sc-eQTL 2.59e-01 0.0984 0.087 0.451 cMono_IL1B L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 1.90e-02 0.215 0.0908 0.451 cMono_IL1B L2
ENSG00000125703 ATG4C -403416 sc-eQTL 3.71e-01 -0.0579 0.0646 0.451 cMono_IL1B L2
ENSG00000162604 TM2D1 655293 sc-eQTL 5.72e-01 -0.0377 0.0667 0.451 cMono_IL1B L2
ENSG00000162607 USP1 -55581 sc-eQTL 6.63e-01 0.0353 0.0808 0.451 cMono_IL1B L2
ENSG00000240563 L1TD1 185867 sc-eQTL 6.29e-01 0.0392 0.0812 0.451 cMono_IL1B L2
ENSG00000088035 ALG6 -986859 sc-eQTL 9.92e-01 0.000945 0.0974 0.451 cMono_S100A L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 1.87e-01 0.119 0.0899 0.451 cMono_S100A L2
ENSG00000125703 ATG4C -403416 sc-eQTL 2.43e-01 -0.0913 0.0779 0.451 cMono_S100A L2
ENSG00000162604 TM2D1 655293 sc-eQTL 2.82e-01 -0.0857 0.0796 0.451 cMono_S100A L2
ENSG00000162607 USP1 -55581 sc-eQTL 2.89e-01 -0.0962 0.0905 0.451 cMono_S100A L2
ENSG00000240563 L1TD1 185867 sc-eQTL 3.83e-02 -0.156 0.0747 0.451 cMono_S100A L2
ENSG00000088035 ALG6 -986859 sc-eQTL 1.76e-01 0.151 0.111 0.445 gdT L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 6.18e-01 -0.0548 0.109 0.445 gdT L2
ENSG00000125703 ATG4C -403416 sc-eQTL 3.21e-01 0.104 0.104 0.445 gdT L2
ENSG00000132849 PATJ 638310 sc-eQTL 5.32e-01 0.0639 0.102 0.445 gdT L2
ENSG00000162604 TM2D1 655293 sc-eQTL 4.71e-01 -0.0777 0.107 0.445 gdT L2
ENSG00000162607 USP1 -55581 sc-eQTL 7.65e-01 -0.0315 0.105 0.445 gdT L2
ENSG00000088035 ALG6 -986859 sc-eQTL 5.40e-01 0.0563 0.0918 0.447 intMono L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.39e-01 -0.0577 0.0938 0.447 intMono L2
ENSG00000125703 ATG4C -403416 sc-eQTL 5.97e-01 0.0475 0.0896 0.447 intMono L2
ENSG00000162604 TM2D1 655293 sc-eQTL 4.49e-01 -0.0718 0.0948 0.447 intMono L2
ENSG00000162607 USP1 -55581 sc-eQTL 2.74e-01 -0.11 0.1 0.447 intMono L2
ENSG00000240563 L1TD1 185867 sc-eQTL 6.86e-01 0.0299 0.0738 0.447 intMono L2
ENSG00000088035 ALG6 -986859 sc-eQTL 7.18e-01 -0.0351 0.0971 0.443 ncMono L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 4.00e-01 0.0804 0.0955 0.443 ncMono L2
ENSG00000125703 ATG4C -403416 sc-eQTL 4.35e-01 0.0698 0.0892 0.443 ncMono L2
ENSG00000162604 TM2D1 655293 sc-eQTL 8.28e-01 -0.021 0.0963 0.443 ncMono L2
ENSG00000162607 USP1 -55581 sc-eQTL 5.68e-01 0.0545 0.0954 0.443 ncMono L2
ENSG00000240563 L1TD1 185867 sc-eQTL 2.68e-01 0.075 0.0675 0.443 ncMono L2
ENSG00000088035 ALG6 -986859 sc-eQTL 1.98e-02 0.232 0.0986 0.446 pDC L2
ENSG00000116641 DOCK7 -307670 sc-eQTL 4.48e-01 0.0778 0.102 0.446 pDC L2
ENSG00000125703 ATG4C -403416 sc-eQTL 5.28e-01 0.0581 0.0918 0.446 pDC L2
ENSG00000162604 TM2D1 655293 sc-eQTL 2.33e-01 -0.107 0.0896 0.446 pDC L2
ENSG00000162607 USP1 -55581 sc-eQTL 9.63e-01 0.00489 0.105 0.446 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -986859 sc-eQTL 2.40e-01 0.115 0.0977 0.451 B_Memory LOneK1K
ENSG00000116641 DOCK7 -307670 sc-eQTL 9.96e-01 0.000474 0.0851 0.451 B_Memory LOneK1K
ENSG00000125703 ATG4C -403416 sc-eQTL 9.39e-01 -0.00528 0.0688 0.451 B_Memory LOneK1K
ENSG00000132849 PATJ 638310 sc-eQTL 4.68e-03 -0.214 0.0747 0.451 B_Memory LOneK1K
ENSG00000162604 TM2D1 655293 sc-eQTL 8.59e-01 -0.0154 0.0865 0.451 B_Memory LOneK1K
ENSG00000162607 USP1 -55581 sc-eQTL 2.21e-01 -0.107 0.0874 0.451 B_Memory LOneK1K
ENSG00000088035 ALG6 -986859 sc-eQTL 2.01e-01 0.122 0.0948 0.451 B_Naive LOneK1K
ENSG00000116641 DOCK7 -307670 sc-eQTL 9.85e-01 -0.00165 0.0889 0.451 B_Naive LOneK1K
ENSG00000125703 ATG4C -403416 sc-eQTL 1.64e-01 -0.0943 0.0675 0.451 B_Naive LOneK1K
ENSG00000132849 PATJ 638310 sc-eQTL 4.37e-01 -0.0631 0.081 0.451 B_Naive LOneK1K
ENSG00000162604 TM2D1 655293 sc-eQTL 7.01e-01 0.0297 0.0774 0.451 B_Naive LOneK1K
ENSG00000162607 USP1 -55581 sc-eQTL 9.88e-01 0.0012 0.0824 0.451 B_Naive LOneK1K
ENSG00000088035 ALG6 -986859 sc-eQTL 3.65e-01 0.0781 0.086 0.451 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -307670 sc-eQTL 3.72e-02 0.18 0.0858 0.451 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -403416 sc-eQTL 8.05e-02 -0.105 0.0595 0.451 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 655293 sc-eQTL 3.06e-01 -0.0639 0.0623 0.451 CD14_Mono LOneK1K
ENSG00000162607 USP1 -55581 sc-eQTL 7.04e-01 -0.0288 0.0757 0.451 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 185867 sc-eQTL 6.58e-01 -0.0364 0.0821 0.451 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -986859 sc-eQTL 5.53e-01 0.0575 0.0966 0.448 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -307670 sc-eQTL 2.99e-01 0.0994 0.0954 0.448 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -403416 sc-eQTL 1.06e-01 0.132 0.0811 0.448 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 655293 sc-eQTL 4.86e-01 -0.0665 0.0953 0.448 CD16_Mono LOneK1K
ENSG00000162607 USP1 -55581 sc-eQTL 6.95e-01 -0.0349 0.089 0.448 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 185867 sc-eQTL 3.81e-01 0.0532 0.0606 0.448 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -986859 sc-eQTL 2.74e-02 0.189 0.0849 0.453 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -307670 sc-eQTL 5.11e-01 -0.0506 0.0769 0.453 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -403416 sc-eQTL 5.69e-01 0.0438 0.0768 0.453 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 638310 sc-eQTL 6.39e-01 0.0389 0.0828 0.453 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 655293 sc-eQTL 4.36e-01 0.0592 0.0758 0.453 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -55581 sc-eQTL 8.80e-01 -0.0125 0.0827 0.453 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -307652 eQTL 0.0458 0.0478 0.0239 0.00703 0.0 0.45
ENSG00000240563 L1TD1 185867 eQTL 0.0224 0.0951 0.0416 0.0 0.0 0.45

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162607 \N -55581 8.08e-06 9.51e-06 1.35e-06 4.96e-06 2.31e-06 3.93e-06 1.04e-05 2.04e-06 8.59e-06 4.99e-06 1.12e-05 5.23e-06 1.36e-05 3.95e-06 2.34e-06 6.52e-06 4.12e-06 6.9e-06 2.61e-06 2.84e-06 5.12e-06 8.16e-06 7.47e-06 3.25e-06 1.3e-05 3.89e-06 4.74e-06 3.55e-06 9.86e-06 9.08e-06 4.95e-06 1.06e-06 1.13e-06 3.5e-06 4.09e-06 2.77e-06 1.87e-06 1.89e-06 2.11e-06 1e-06 9.4e-07 1.18e-05 1.29e-06 2.03e-07 7.57e-07 1.72e-06 1.46e-06 7.28e-07 4.86e-07
ENSG00000240563 L1TD1 185867 2.78e-06 2.44e-06 3.27e-07 1.88e-06 5.29e-07 8.21e-07 1.87e-06 7.12e-07 1.96e-06 9.88e-07 2.41e-06 1.34e-06 3.27e-06 1.36e-06 8.73e-07 1.63e-06 1.17e-06 2.23e-06 1.05e-06 1.33e-06 1.14e-06 2.9e-06 2.32e-06 1.17e-06 3.36e-06 1.21e-06 1.31e-06 1.69e-06 2.15e-06 1.78e-06 1.65e-06 3.79e-07 5.43e-07 1.24e-06 1.35e-06 9.73e-07 7.76e-07 4.38e-07 1.13e-06 4.35e-07 2.25e-07 3.32e-06 4.98e-07 1.99e-07 3.52e-07 3.27e-07 8.08e-07 1.83e-07 1.53e-07