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Genes within 1Mb (chr1:62379247:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -988328 sc-eQTL 3.52e-01 0.0772 0.0828 0.449 B L1
ENSG00000116641 DOCK7 -309139 sc-eQTL 8.91e-01 -0.0114 0.083 0.449 B L1
ENSG00000125703 ATG4C -404885 sc-eQTL 4.67e-01 -0.042 0.0576 0.449 B L1
ENSG00000132849 PATJ 636841 sc-eQTL 4.87e-02 -0.138 0.0694 0.449 B L1
ENSG00000162604 TM2D1 653824 sc-eQTL 2.97e-01 0.0729 0.0697 0.449 B L1
ENSG00000162607 USP1 -57050 sc-eQTL 4.72e-01 -0.0574 0.0796 0.449 B L1
ENSG00000088035 ALG6 -988328 sc-eQTL 2.45e-01 0.0891 0.0764 0.449 CD4T L1
ENSG00000116641 DOCK7 -309139 sc-eQTL 4.12e-01 0.0637 0.0775 0.449 CD4T L1
ENSG00000125703 ATG4C -404885 sc-eQTL 3.16e-01 -0.0628 0.0625 0.449 CD4T L1
ENSG00000132849 PATJ 636841 sc-eQTL 3.86e-02 -0.105 0.0503 0.449 CD4T L1
ENSG00000162604 TM2D1 653824 sc-eQTL 4.36e-01 -0.0482 0.0617 0.449 CD4T L1
ENSG00000162607 USP1 -57050 sc-eQTL 9.65e-01 -0.00264 0.0608 0.449 CD4T L1
ENSG00000088035 ALG6 -988328 sc-eQTL 5.53e-01 0.0502 0.0845 0.449 CD8T L1
ENSG00000116641 DOCK7 -309139 sc-eQTL 9.97e-01 -0.000312 0.0856 0.449 CD8T L1
ENSG00000125703 ATG4C -404885 sc-eQTL 5.25e-01 -0.0517 0.0813 0.449 CD8T L1
ENSG00000132849 PATJ 636841 sc-eQTL 4.10e-01 -0.0409 0.0495 0.449 CD8T L1
ENSG00000162604 TM2D1 653824 sc-eQTL 5.45e-01 0.0452 0.0744 0.449 CD8T L1
ENSG00000162607 USP1 -57050 sc-eQTL 5.04e-01 0.0473 0.0708 0.449 CD8T L1
ENSG00000088035 ALG6 -988328 sc-eQTL 2.98e-01 0.0913 0.0875 0.455 DC L1
ENSG00000116641 DOCK7 -309139 sc-eQTL 9.11e-01 0.0101 0.0899 0.455 DC L1
ENSG00000125703 ATG4C -404885 sc-eQTL 8.95e-01 0.00933 0.0704 0.455 DC L1
ENSG00000162604 TM2D1 653824 sc-eQTL 7.77e-02 -0.144 0.0813 0.455 DC L1
ENSG00000162607 USP1 -57050 sc-eQTL 8.90e-01 -0.0119 0.0859 0.455 DC L1
ENSG00000088035 ALG6 -988328 sc-eQTL 3.09e-01 0.0888 0.087 0.449 Mono L1
ENSG00000116641 DOCK7 -309139 sc-eQTL 2.04e-02 0.195 0.0833 0.449 Mono L1
ENSG00000125703 ATG4C -404885 sc-eQTL 3.19e-01 -0.0568 0.0569 0.449 Mono L1
ENSG00000162604 TM2D1 653824 sc-eQTL 2.63e-01 -0.0708 0.0631 0.449 Mono L1
ENSG00000162607 USP1 -57050 sc-eQTL 1.51e-01 -0.106 0.0736 0.449 Mono L1
ENSG00000240563 L1TD1 184398 sc-eQTL 6.67e-01 0.0297 0.069 0.449 Mono L1
ENSG00000088035 ALG6 -988328 sc-eQTL 1.04e-01 0.135 0.0829 0.448 NK L1
ENSG00000116641 DOCK7 -309139 sc-eQTL 1.64e-01 -0.0956 0.0684 0.448 NK L1
ENSG00000125703 ATG4C -404885 sc-eQTL 8.06e-01 0.0181 0.0737 0.448 NK L1
ENSG00000132849 PATJ 636841 sc-eQTL 6.73e-01 0.0305 0.0723 0.448 NK L1
ENSG00000162604 TM2D1 653824 sc-eQTL 3.88e-01 0.0639 0.0739 0.448 NK L1
ENSG00000162607 USP1 -57050 sc-eQTL 7.52e-01 0.026 0.0819 0.448 NK L1
ENSG00000088035 ALG6 -988328 sc-eQTL 5.66e-01 0.046 0.08 0.449 Other_T L1
ENSG00000116641 DOCK7 -309139 sc-eQTL 1.21e-01 -0.126 0.0813 0.449 Other_T L1
ENSG00000125703 ATG4C -404885 sc-eQTL 8.82e-01 -0.0105 0.0708 0.449 Other_T L1
ENSG00000132849 PATJ 636841 sc-eQTL 4.34e-01 0.0516 0.0658 0.449 Other_T L1
ENSG00000162604 TM2D1 653824 sc-eQTL 9.34e-01 0.00644 0.0773 0.449 Other_T L1
ENSG00000162607 USP1 -57050 sc-eQTL 5.85e-01 -0.0297 0.0544 0.449 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -988328 sc-eQTL 1.81e-01 -0.137 0.102 0.441 B_Activated L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 2.11e-02 0.218 0.0938 0.441 B_Activated L2
ENSG00000125703 ATG4C -404885 sc-eQTL 8.96e-01 0.0131 0.1 0.441 B_Activated L2
ENSG00000132849 PATJ 636841 sc-eQTL 6.71e-01 0.0362 0.0851 0.441 B_Activated L2
ENSG00000162604 TM2D1 653824 sc-eQTL 1.66e-02 0.257 0.106 0.441 B_Activated L2
ENSG00000162607 USP1 -57050 sc-eQTL 6.41e-01 0.0496 0.106 0.441 B_Activated L2
ENSG00000088035 ALG6 -988328 sc-eQTL 6.91e-01 -0.0386 0.097 0.446 B_Intermediate L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 8.83e-01 -0.0136 0.0927 0.446 B_Intermediate L2
ENSG00000125703 ATG4C -404885 sc-eQTL 7.63e-01 -0.0237 0.0785 0.446 B_Intermediate L2
ENSG00000132849 PATJ 636841 sc-eQTL 3.25e-02 -0.181 0.0841 0.446 B_Intermediate L2
ENSG00000162604 TM2D1 653824 sc-eQTL 6.09e-01 -0.0456 0.0891 0.446 B_Intermediate L2
ENSG00000162607 USP1 -57050 sc-eQTL 7.98e-01 0.024 0.0933 0.446 B_Intermediate L2
ENSG00000088035 ALG6 -988328 sc-eQTL 1.12e-01 0.151 0.0944 0.45 B_Memory L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.61e-01 0.0814 0.0889 0.45 B_Memory L2
ENSG00000125703 ATG4C -404885 sc-eQTL 6.20e-01 0.042 0.0846 0.45 B_Memory L2
ENSG00000132849 PATJ 636841 sc-eQTL 1.30e-01 -0.128 0.0841 0.45 B_Memory L2
ENSG00000162604 TM2D1 653824 sc-eQTL 7.01e-01 0.0365 0.095 0.45 B_Memory L2
ENSG00000162607 USP1 -57050 sc-eQTL 1.92e-01 -0.127 0.0973 0.45 B_Memory L2
ENSG00000088035 ALG6 -988328 sc-eQTL 6.36e-01 0.0454 0.0957 0.449 B_Naive1 L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 5.94e-01 0.0489 0.0916 0.449 B_Naive1 L2
ENSG00000125703 ATG4C -404885 sc-eQTL 4.34e-01 -0.0553 0.0705 0.449 B_Naive1 L2
ENSG00000132849 PATJ 636841 sc-eQTL 5.35e-01 -0.0563 0.0907 0.449 B_Naive1 L2
ENSG00000162604 TM2D1 653824 sc-eQTL 5.29e-01 -0.0525 0.0834 0.449 B_Naive1 L2
ENSG00000162607 USP1 -57050 sc-eQTL 4.10e-01 0.068 0.0823 0.449 B_Naive1 L2
ENSG00000088035 ALG6 -988328 sc-eQTL 1.62e-01 0.136 0.0967 0.451 B_Naive2 L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 4.49e-01 -0.0708 0.0933 0.451 B_Naive2 L2
ENSG00000125703 ATG4C -404885 sc-eQTL 5.85e-01 -0.0492 0.0898 0.451 B_Naive2 L2
ENSG00000132849 PATJ 636841 sc-eQTL 7.01e-01 -0.0353 0.092 0.451 B_Naive2 L2
ENSG00000162604 TM2D1 653824 sc-eQTL 2.90e-02 0.202 0.092 0.451 B_Naive2 L2
ENSG00000162607 USP1 -57050 sc-eQTL 3.20e-01 -0.0923 0.0926 0.451 B_Naive2 L2
ENSG00000088035 ALG6 -988328 sc-eQTL 4.26e-01 0.0803 0.101 0.452 CD4_CTL L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.66e-01 -0.0796 0.088 0.452 CD4_CTL L2
ENSG00000125703 ATG4C -404885 sc-eQTL 9.67e-01 -0.00372 0.0912 0.452 CD4_CTL L2
ENSG00000132849 PATJ 636841 sc-eQTL 6.91e-01 0.0291 0.073 0.452 CD4_CTL L2
ENSG00000162604 TM2D1 653824 sc-eQTL 6.27e-01 -0.0454 0.0933 0.452 CD4_CTL L2
ENSG00000162607 USP1 -57050 sc-eQTL 5.53e-01 -0.0551 0.0928 0.452 CD4_CTL L2
ENSG00000088035 ALG6 -988328 sc-eQTL 8.48e-01 -0.0162 0.0847 0.449 CD4_Naive L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 1.40e-01 0.123 0.0828 0.449 CD4_Naive L2
ENSG00000125703 ATG4C -404885 sc-eQTL 2.87e-01 -0.0782 0.0734 0.449 CD4_Naive L2
ENSG00000132849 PATJ 636841 sc-eQTL 1.69e-01 -0.0709 0.0514 0.449 CD4_Naive L2
ENSG00000162604 TM2D1 653824 sc-eQTL 2.95e-01 -0.0777 0.0741 0.449 CD4_Naive L2
ENSG00000162607 USP1 -57050 sc-eQTL 6.82e-01 0.0282 0.0687 0.449 CD4_Naive L2
ENSG00000088035 ALG6 -988328 sc-eQTL 2.86e-02 0.205 0.093 0.449 CD4_TCM L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 6.46e-01 0.0383 0.0833 0.449 CD4_TCM L2
ENSG00000125703 ATG4C -404885 sc-eQTL 4.79e-01 -0.0575 0.081 0.449 CD4_TCM L2
ENSG00000132849 PATJ 636841 sc-eQTL 4.37e-01 -0.0506 0.065 0.449 CD4_TCM L2
ENSG00000162604 TM2D1 653824 sc-eQTL 2.75e-01 0.0828 0.0757 0.449 CD4_TCM L2
ENSG00000162607 USP1 -57050 sc-eQTL 9.92e-01 0.000767 0.0784 0.449 CD4_TCM L2
ENSG00000088035 ALG6 -988328 sc-eQTL 9.32e-02 0.161 0.0955 0.449 CD4_TEM L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 6.66e-01 0.0405 0.0936 0.449 CD4_TEM L2
ENSG00000125703 ATG4C -404885 sc-eQTL 4.69e-01 -0.0659 0.0909 0.449 CD4_TEM L2
ENSG00000132849 PATJ 636841 sc-eQTL 3.14e-02 -0.182 0.0839 0.449 CD4_TEM L2
ENSG00000162604 TM2D1 653824 sc-eQTL 7.40e-01 -0.0297 0.0893 0.449 CD4_TEM L2
ENSG00000162607 USP1 -57050 sc-eQTL 8.70e-01 -0.0145 0.089 0.449 CD4_TEM L2
ENSG00000088035 ALG6 -988328 sc-eQTL 8.73e-01 0.0147 0.0916 0.449 CD8_CTL L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 1.12e-01 -0.138 0.0864 0.449 CD8_CTL L2
ENSG00000125703 ATG4C -404885 sc-eQTL 2.49e-01 -0.107 0.0922 0.449 CD8_CTL L2
ENSG00000132849 PATJ 636841 sc-eQTL 4.59e-01 -0.0649 0.0875 0.449 CD8_CTL L2
ENSG00000162604 TM2D1 653824 sc-eQTL 7.99e-01 0.0205 0.0804 0.449 CD8_CTL L2
ENSG00000162607 USP1 -57050 sc-eQTL 8.77e-01 0.0134 0.0861 0.449 CD8_CTL L2
ENSG00000088035 ALG6 -988328 sc-eQTL 3.07e-01 0.0934 0.0912 0.449 CD8_Naive L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 1.98e-02 0.219 0.0933 0.449 CD8_Naive L2
ENSG00000125703 ATG4C -404885 sc-eQTL 2.18e-01 -0.112 0.0904 0.449 CD8_Naive L2
ENSG00000132849 PATJ 636841 sc-eQTL 3.40e-01 -0.0662 0.0692 0.449 CD8_Naive L2
ENSG00000162604 TM2D1 653824 sc-eQTL 9.84e-01 0.00166 0.0847 0.449 CD8_Naive L2
ENSG00000162607 USP1 -57050 sc-eQTL 3.73e-01 0.0692 0.0775 0.449 CD8_Naive L2
ENSG00000088035 ALG6 -988328 sc-eQTL 7.61e-01 -0.0296 0.0973 0.463 CD8_TCM L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.60e-01 -0.087 0.0947 0.463 CD8_TCM L2
ENSG00000125703 ATG4C -404885 sc-eQTL 5.22e-01 0.0622 0.097 0.463 CD8_TCM L2
ENSG00000132849 PATJ 636841 sc-eQTL 5.87e-01 -0.0486 0.0893 0.463 CD8_TCM L2
ENSG00000162604 TM2D1 653824 sc-eQTL 2.61e-01 0.102 0.0905 0.463 CD8_TCM L2
ENSG00000162607 USP1 -57050 sc-eQTL 8.60e-01 -0.0161 0.0908 0.463 CD8_TCM L2
ENSG00000088035 ALG6 -988328 sc-eQTL 3.38e-01 -0.0961 0.1 0.441 CD8_TEM L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.48e-01 -0.0912 0.097 0.441 CD8_TEM L2
ENSG00000125703 ATG4C -404885 sc-eQTL 5.65e-01 0.0538 0.0933 0.441 CD8_TEM L2
ENSG00000132849 PATJ 636841 sc-eQTL 7.62e-01 -0.0287 0.0946 0.441 CD8_TEM L2
ENSG00000162604 TM2D1 653824 sc-eQTL 6.39e-01 -0.0453 0.0963 0.441 CD8_TEM L2
ENSG00000162607 USP1 -57050 sc-eQTL 3.53e-01 0.0897 0.0963 0.441 CD8_TEM L2
ENSG00000088035 ALG6 -988328 sc-eQTL 1.43e-01 0.132 0.09 0.45 MAIT L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 5.32e-01 0.0542 0.0866 0.45 MAIT L2
ENSG00000125703 ATG4C -404885 sc-eQTL 6.75e-01 -0.0384 0.0914 0.45 MAIT L2
ENSG00000132849 PATJ 636841 sc-eQTL 7.85e-01 0.0211 0.0773 0.45 MAIT L2
ENSG00000162604 TM2D1 653824 sc-eQTL 3.32e-01 -0.0853 0.0877 0.45 MAIT L2
ENSG00000162607 USP1 -57050 sc-eQTL 6.79e-01 -0.0376 0.0908 0.45 MAIT L2
ENSG00000088035 ALG6 -988328 sc-eQTL 5.96e-01 -0.051 0.0962 0.444 NK_CD56bright L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 7.38e-01 -0.0279 0.0834 0.444 NK_CD56bright L2
ENSG00000125703 ATG4C -404885 sc-eQTL 8.21e-01 0.0211 0.0931 0.444 NK_CD56bright L2
ENSG00000132849 PATJ 636841 sc-eQTL 9.94e-01 -0.000699 0.0913 0.444 NK_CD56bright L2
ENSG00000162604 TM2D1 653824 sc-eQTL 6.59e-01 -0.0411 0.0929 0.444 NK_CD56bright L2
ENSG00000162607 USP1 -57050 sc-eQTL 8.78e-01 -0.0154 0.1 0.444 NK_CD56bright L2
ENSG00000088035 ALG6 -988328 sc-eQTL 1.71e-03 0.292 0.0918 0.45 NK_CD56dim L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 8.07e-01 -0.02 0.0818 0.45 NK_CD56dim L2
ENSG00000125703 ATG4C -404885 sc-eQTL 2.25e-01 0.101 0.0828 0.45 NK_CD56dim L2
ENSG00000132849 PATJ 636841 sc-eQTL 6.71e-01 0.0383 0.0901 0.45 NK_CD56dim L2
ENSG00000162604 TM2D1 653824 sc-eQTL 4.36e-01 0.0667 0.0854 0.45 NK_CD56dim L2
ENSG00000162607 USP1 -57050 sc-eQTL 3.37e-01 0.0881 0.0915 0.45 NK_CD56dim L2
ENSG00000088035 ALG6 -988328 sc-eQTL 5.83e-01 -0.0575 0.104 0.443 NK_HLA L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.56e-02 -0.167 0.079 0.443 NK_HLA L2
ENSG00000125703 ATG4C -404885 sc-eQTL 4.09e-01 -0.0769 0.0928 0.443 NK_HLA L2
ENSG00000132849 PATJ 636841 sc-eQTL 4.32e-01 0.0679 0.0861 0.443 NK_HLA L2
ENSG00000162604 TM2D1 653824 sc-eQTL 2.34e-01 -0.117 0.0977 0.443 NK_HLA L2
ENSG00000162607 USP1 -57050 sc-eQTL 4.18e-01 -0.0827 0.102 0.443 NK_HLA L2
ENSG00000088035 ALG6 -988328 sc-eQTL 6.65e-01 -0.0393 0.0907 0.45 NK_cytokine L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 9.43e-01 -0.00598 0.0841 0.45 NK_cytokine L2
ENSG00000125703 ATG4C -404885 sc-eQTL 4.91e-01 -0.0593 0.0859 0.45 NK_cytokine L2
ENSG00000132849 PATJ 636841 sc-eQTL 8.06e-01 0.0223 0.0907 0.45 NK_cytokine L2
ENSG00000162604 TM2D1 653824 sc-eQTL 9.38e-01 0.00695 0.0887 0.45 NK_cytokine L2
ENSG00000162607 USP1 -57050 sc-eQTL 3.14e-01 -0.0944 0.0934 0.45 NK_cytokine L2
ENSG00000088035 ALG6 -988328 sc-eQTL 2.51e-01 -0.146 0.127 0.459 PB L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 2.40e-01 -0.16 0.135 0.459 PB L2
ENSG00000125703 ATG4C -404885 sc-eQTL 5.18e-01 -0.0769 0.119 0.459 PB L2
ENSG00000132849 PATJ 636841 sc-eQTL 3.61e-01 -0.113 0.123 0.459 PB L2
ENSG00000162604 TM2D1 653824 sc-eQTL 1.68e-01 0.165 0.119 0.459 PB L2
ENSG00000162607 USP1 -57050 sc-eQTL 2.93e-03 -0.345 0.113 0.459 PB L2
ENSG00000088035 ALG6 -988328 sc-eQTL 4.49e-01 0.0689 0.0908 0.448 Pro_T L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 9.43e-01 -0.00653 0.0912 0.448 Pro_T L2
ENSG00000125703 ATG4C -404885 sc-eQTL 6.18e-01 0.0399 0.0798 0.448 Pro_T L2
ENSG00000132849 PATJ 636841 sc-eQTL 7.83e-01 0.0241 0.0871 0.448 Pro_T L2
ENSG00000162604 TM2D1 653824 sc-eQTL 1.00e-01 0.16 0.097 0.448 Pro_T L2
ENSG00000162607 USP1 -57050 sc-eQTL 3.73e-01 0.049 0.055 0.448 Pro_T L2
ENSG00000088035 ALG6 -988328 sc-eQTL 6.31e-01 0.047 0.0979 0.449 Treg L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 2.42e-01 -0.105 0.0896 0.449 Treg L2
ENSG00000125703 ATG4C -404885 sc-eQTL 5.67e-01 0.0526 0.0918 0.449 Treg L2
ENSG00000132849 PATJ 636841 sc-eQTL 8.15e-01 0.0199 0.0851 0.449 Treg L2
ENSG00000162604 TM2D1 653824 sc-eQTL 1.81e-01 -0.125 0.0933 0.449 Treg L2
ENSG00000162607 USP1 -57050 sc-eQTL 9.90e-01 -0.00117 0.093 0.449 Treg L2
ENSG00000088035 ALG6 -988328 sc-eQTL 9.26e-01 0.00842 0.091 0.449 cDC L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 4.28e-01 -0.0708 0.0891 0.449 cDC L2
ENSG00000125703 ATG4C -404885 sc-eQTL 8.98e-01 -0.00991 0.0775 0.449 cDC L2
ENSG00000162604 TM2D1 653824 sc-eQTL 1.88e-01 -0.127 0.0964 0.449 cDC L2
ENSG00000162607 USP1 -57050 sc-eQTL 7.77e-01 0.0248 0.0875 0.449 cDC L2
ENSG00000088035 ALG6 -988328 sc-eQTL 2.97e-01 0.0913 0.0873 0.449 cMono_IL1B L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 1.83e-02 0.217 0.091 0.449 cMono_IL1B L2
ENSG00000125703 ATG4C -404885 sc-eQTL 3.93e-01 -0.0554 0.0648 0.449 cMono_IL1B L2
ENSG00000162604 TM2D1 653824 sc-eQTL 6.06e-01 -0.0345 0.0669 0.449 cMono_IL1B L2
ENSG00000162607 USP1 -57050 sc-eQTL 6.74e-01 0.0341 0.081 0.449 cMono_IL1B L2
ENSG00000240563 L1TD1 184398 sc-eQTL 6.46e-01 0.0375 0.0814 0.449 cMono_IL1B L2
ENSG00000088035 ALG6 -988328 sc-eQTL 9.67e-01 0.00406 0.0977 0.449 cMono_S100A L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 1.70e-01 0.124 0.0901 0.449 cMono_S100A L2
ENSG00000125703 ATG4C -404885 sc-eQTL 2.81e-01 -0.0845 0.0782 0.449 cMono_S100A L2
ENSG00000162604 TM2D1 653824 sc-eQTL 3.19e-01 -0.0797 0.0798 0.449 cMono_S100A L2
ENSG00000162607 USP1 -57050 sc-eQTL 2.97e-01 -0.0948 0.0908 0.449 cMono_S100A L2
ENSG00000240563 L1TD1 184398 sc-eQTL 3.66e-02 -0.158 0.0749 0.449 cMono_S100A L2
ENSG00000088035 ALG6 -988328 sc-eQTL 1.76e-01 0.151 0.111 0.445 gdT L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 6.18e-01 -0.0548 0.109 0.445 gdT L2
ENSG00000125703 ATG4C -404885 sc-eQTL 3.21e-01 0.104 0.104 0.445 gdT L2
ENSG00000132849 PATJ 636841 sc-eQTL 5.32e-01 0.0639 0.102 0.445 gdT L2
ENSG00000162604 TM2D1 653824 sc-eQTL 4.71e-01 -0.0777 0.107 0.445 gdT L2
ENSG00000162607 USP1 -57050 sc-eQTL 7.65e-01 -0.0315 0.105 0.445 gdT L2
ENSG00000088035 ALG6 -988328 sc-eQTL 5.39e-01 0.0566 0.0919 0.444 intMono L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 4.78e-01 -0.0667 0.0939 0.444 intMono L2
ENSG00000125703 ATG4C -404885 sc-eQTL 7.02e-01 0.0344 0.0897 0.444 intMono L2
ENSG00000162604 TM2D1 653824 sc-eQTL 4.89e-01 -0.0657 0.0949 0.444 intMono L2
ENSG00000162607 USP1 -57050 sc-eQTL 2.51e-01 -0.115 0.1 0.444 intMono L2
ENSG00000240563 L1TD1 184398 sc-eQTL 7.23e-01 0.0262 0.0739 0.444 intMono L2
ENSG00000088035 ALG6 -988328 sc-eQTL 7.60e-01 -0.0297 0.0972 0.441 ncMono L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.69e-01 0.0861 0.0955 0.441 ncMono L2
ENSG00000125703 ATG4C -404885 sc-eQTL 4.00e-01 0.0753 0.0892 0.441 ncMono L2
ENSG00000162604 TM2D1 653824 sc-eQTL 9.07e-01 -0.0113 0.0964 0.441 ncMono L2
ENSG00000162607 USP1 -57050 sc-eQTL 5.72e-01 0.0541 0.0955 0.441 ncMono L2
ENSG00000240563 L1TD1 184398 sc-eQTL 2.67e-01 0.0752 0.0676 0.441 ncMono L2
ENSG00000088035 ALG6 -988328 sc-eQTL 2.51e-02 0.224 0.0992 0.444 pDC L2
ENSG00000116641 DOCK7 -309139 sc-eQTL 4.04e-01 0.086 0.103 0.444 pDC L2
ENSG00000125703 ATG4C -404885 sc-eQTL 6.34e-01 0.0441 0.0923 0.444 pDC L2
ENSG00000162604 TM2D1 653824 sc-eQTL 2.35e-01 -0.107 0.0901 0.444 pDC L2
ENSG00000162607 USP1 -57050 sc-eQTL 9.43e-01 0.00761 0.106 0.444 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -988328 sc-eQTL 2.12e-01 0.123 0.0979 0.449 B_Memory LOneK1K
ENSG00000116641 DOCK7 -309139 sc-eQTL 9.44e-01 0.00602 0.0853 0.449 B_Memory LOneK1K
ENSG00000125703 ATG4C -404885 sc-eQTL 8.12e-01 -0.0164 0.0689 0.449 B_Memory LOneK1K
ENSG00000132849 PATJ 636841 sc-eQTL 5.10e-03 -0.212 0.0749 0.449 B_Memory LOneK1K
ENSG00000162604 TM2D1 653824 sc-eQTL 9.26e-01 -0.00809 0.0867 0.449 B_Memory LOneK1K
ENSG00000162607 USP1 -57050 sc-eQTL 3.18e-01 -0.0879 0.0877 0.449 B_Memory LOneK1K
ENSG00000088035 ALG6 -988328 sc-eQTL 2.10e-01 0.119 0.095 0.449 B_Naive LOneK1K
ENSG00000116641 DOCK7 -309139 sc-eQTL 8.97e-01 -0.0115 0.0891 0.449 B_Naive LOneK1K
ENSG00000125703 ATG4C -404885 sc-eQTL 1.36e-01 -0.101 0.0676 0.449 B_Naive LOneK1K
ENSG00000132849 PATJ 636841 sc-eQTL 4.90e-01 -0.0561 0.0812 0.449 B_Naive LOneK1K
ENSG00000162604 TM2D1 653824 sc-eQTL 6.15e-01 0.0391 0.0775 0.449 B_Naive LOneK1K
ENSG00000162607 USP1 -57050 sc-eQTL 8.89e-01 -0.0115 0.0825 0.449 B_Naive LOneK1K
ENSG00000088035 ALG6 -988328 sc-eQTL 3.82e-01 0.0755 0.0862 0.449 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.19e-02 0.186 0.086 0.449 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -404885 sc-eQTL 1.02e-01 -0.0981 0.0597 0.449 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 653824 sc-eQTL 3.45e-01 -0.0592 0.0626 0.449 CD14_Mono LOneK1K
ENSG00000162607 USP1 -57050 sc-eQTL 7.12e-01 -0.0281 0.076 0.449 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 184398 sc-eQTL 6.42e-01 -0.0383 0.0824 0.449 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -988328 sc-eQTL 5.31e-01 0.0607 0.0968 0.446 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -309139 sc-eQTL 3.18e-01 0.0956 0.0956 0.446 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -404885 sc-eQTL 1.22e-01 0.126 0.0812 0.446 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 653824 sc-eQTL 5.76e-01 -0.0535 0.0955 0.446 CD16_Mono LOneK1K
ENSG00000162607 USP1 -57050 sc-eQTL 6.84e-01 -0.0363 0.0891 0.446 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 184398 sc-eQTL 3.65e-01 0.055 0.0607 0.446 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -988328 sc-eQTL 3.18e-02 0.184 0.0853 0.45 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -309139 sc-eQTL 4.35e-01 -0.0603 0.0771 0.45 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -404885 sc-eQTL 6.06e-01 0.0398 0.0771 0.45 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 636841 sc-eQTL 5.82e-01 0.0457 0.083 0.45 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 653824 sc-eQTL 3.69e-01 0.0685 0.076 0.45 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -57050 sc-eQTL 9.96e-01 0.000368 0.083 0.45 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -309121 eQTL 0.0409 0.0489 0.0239 0.00983 0.00112 0.446
ENSG00000240563 L1TD1 184398 eQTL 0.0255 0.093 0.0416 0.0 0.0 0.446

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162607 \N -57050 7.46e-06 9.04e-06 1.34e-06 4.31e-06 2.4e-06 3.7e-06 9.61e-06 1.84e-06 7.13e-06 4.24e-06 1.04e-05 4.64e-06 1.22e-05 3.82e-06 2.13e-06 6.1e-06 3.8e-06 6.08e-06 2.5e-06 2.77e-06 4.6e-06 7.81e-06 6.89e-06 3.38e-06 1.25e-05 3.33e-06 4.39e-06 3.24e-06 8.37e-06 8.01e-06 4.46e-06 9.96e-07 1.25e-06 3.35e-06 3.49e-06 2.67e-06 1.84e-06 2e-06 2.19e-06 1e-06 1.11e-06 1.02e-05 1.19e-06 2.52e-07 8.18e-07 1.68e-06 1.27e-06 7.8e-07 4.4e-07
ENSG00000240563 L1TD1 184398 1.91e-06 2.19e-06 2.88e-07 1.41e-06 4.74e-07 6.91e-07 1.31e-06 4.97e-07 1.66e-06 7.32e-07 1.86e-06 1.45e-06 3.2e-06 8.3e-07 4.59e-07 1.2e-06 1.12e-06 1.46e-06 5.3e-07 9.31e-07 6.53e-07 1.99e-06 1.78e-06 9.4e-07 2.67e-06 1.22e-06 1.16e-06 1.29e-06 1.78e-06 1.64e-06 9.44e-07 2.65e-07 4.55e-07 1.1e-06 9.13e-07 8.65e-07 7.47e-07 4.02e-07 9.27e-07 2.76e-07 1.96e-07 2.75e-06 3.9e-07 1.99e-07 3.29e-07 2.94e-07 4.12e-07 2.43e-07 2.79e-07