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Genes within 1Mb (chr1:62378915:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -988660 sc-eQTL 3.52e-01 0.0772 0.0828 0.449 B L1
ENSG00000116641 DOCK7 -309471 sc-eQTL 8.91e-01 -0.0114 0.083 0.449 B L1
ENSG00000125703 ATG4C -405217 sc-eQTL 4.67e-01 -0.042 0.0576 0.449 B L1
ENSG00000132849 PATJ 636509 sc-eQTL 4.87e-02 -0.138 0.0694 0.449 B L1
ENSG00000162604 TM2D1 653492 sc-eQTL 2.97e-01 0.0729 0.0697 0.449 B L1
ENSG00000162607 USP1 -57382 sc-eQTL 4.72e-01 -0.0574 0.0796 0.449 B L1
ENSG00000088035 ALG6 -988660 sc-eQTL 2.45e-01 0.0891 0.0764 0.449 CD4T L1
ENSG00000116641 DOCK7 -309471 sc-eQTL 4.12e-01 0.0637 0.0775 0.449 CD4T L1
ENSG00000125703 ATG4C -405217 sc-eQTL 3.16e-01 -0.0628 0.0625 0.449 CD4T L1
ENSG00000132849 PATJ 636509 sc-eQTL 3.86e-02 -0.105 0.0503 0.449 CD4T L1
ENSG00000162604 TM2D1 653492 sc-eQTL 4.36e-01 -0.0482 0.0617 0.449 CD4T L1
ENSG00000162607 USP1 -57382 sc-eQTL 9.65e-01 -0.00264 0.0608 0.449 CD4T L1
ENSG00000088035 ALG6 -988660 sc-eQTL 5.53e-01 0.0502 0.0845 0.449 CD8T L1
ENSG00000116641 DOCK7 -309471 sc-eQTL 9.97e-01 -0.000312 0.0856 0.449 CD8T L1
ENSG00000125703 ATG4C -405217 sc-eQTL 5.25e-01 -0.0517 0.0813 0.449 CD8T L1
ENSG00000132849 PATJ 636509 sc-eQTL 4.10e-01 -0.0409 0.0495 0.449 CD8T L1
ENSG00000162604 TM2D1 653492 sc-eQTL 5.45e-01 0.0452 0.0744 0.449 CD8T L1
ENSG00000162607 USP1 -57382 sc-eQTL 5.04e-01 0.0473 0.0708 0.449 CD8T L1
ENSG00000088035 ALG6 -988660 sc-eQTL 2.98e-01 0.0913 0.0875 0.455 DC L1
ENSG00000116641 DOCK7 -309471 sc-eQTL 9.11e-01 0.0101 0.0899 0.455 DC L1
ENSG00000125703 ATG4C -405217 sc-eQTL 8.95e-01 0.00933 0.0704 0.455 DC L1
ENSG00000162604 TM2D1 653492 sc-eQTL 7.77e-02 -0.144 0.0813 0.455 DC L1
ENSG00000162607 USP1 -57382 sc-eQTL 8.90e-01 -0.0119 0.0859 0.455 DC L1
ENSG00000088035 ALG6 -988660 sc-eQTL 3.09e-01 0.0888 0.087 0.449 Mono L1
ENSG00000116641 DOCK7 -309471 sc-eQTL 2.04e-02 0.195 0.0833 0.449 Mono L1
ENSG00000125703 ATG4C -405217 sc-eQTL 3.19e-01 -0.0568 0.0569 0.449 Mono L1
ENSG00000162604 TM2D1 653492 sc-eQTL 2.63e-01 -0.0708 0.0631 0.449 Mono L1
ENSG00000162607 USP1 -57382 sc-eQTL 1.51e-01 -0.106 0.0736 0.449 Mono L1
ENSG00000240563 L1TD1 184066 sc-eQTL 6.67e-01 0.0297 0.069 0.449 Mono L1
ENSG00000088035 ALG6 -988660 sc-eQTL 1.04e-01 0.135 0.0829 0.448 NK L1
ENSG00000116641 DOCK7 -309471 sc-eQTL 1.64e-01 -0.0956 0.0684 0.448 NK L1
ENSG00000125703 ATG4C -405217 sc-eQTL 8.06e-01 0.0181 0.0737 0.448 NK L1
ENSG00000132849 PATJ 636509 sc-eQTL 6.73e-01 0.0305 0.0723 0.448 NK L1
ENSG00000162604 TM2D1 653492 sc-eQTL 3.88e-01 0.0639 0.0739 0.448 NK L1
ENSG00000162607 USP1 -57382 sc-eQTL 7.52e-01 0.026 0.0819 0.448 NK L1
ENSG00000088035 ALG6 -988660 sc-eQTL 5.66e-01 0.046 0.08 0.449 Other_T L1
ENSG00000116641 DOCK7 -309471 sc-eQTL 1.21e-01 -0.126 0.0813 0.449 Other_T L1
ENSG00000125703 ATG4C -405217 sc-eQTL 8.82e-01 -0.0105 0.0708 0.449 Other_T L1
ENSG00000132849 PATJ 636509 sc-eQTL 4.34e-01 0.0516 0.0658 0.449 Other_T L1
ENSG00000162604 TM2D1 653492 sc-eQTL 9.34e-01 0.00644 0.0773 0.449 Other_T L1
ENSG00000162607 USP1 -57382 sc-eQTL 5.85e-01 -0.0297 0.0544 0.449 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -988660 sc-eQTL 1.81e-01 -0.137 0.102 0.441 B_Activated L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 2.11e-02 0.218 0.0938 0.441 B_Activated L2
ENSG00000125703 ATG4C -405217 sc-eQTL 8.96e-01 0.0131 0.1 0.441 B_Activated L2
ENSG00000132849 PATJ 636509 sc-eQTL 6.71e-01 0.0362 0.0851 0.441 B_Activated L2
ENSG00000162604 TM2D1 653492 sc-eQTL 1.66e-02 0.257 0.106 0.441 B_Activated L2
ENSG00000162607 USP1 -57382 sc-eQTL 6.41e-01 0.0496 0.106 0.441 B_Activated L2
ENSG00000088035 ALG6 -988660 sc-eQTL 6.91e-01 -0.0386 0.097 0.446 B_Intermediate L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 8.83e-01 -0.0136 0.0927 0.446 B_Intermediate L2
ENSG00000125703 ATG4C -405217 sc-eQTL 7.63e-01 -0.0237 0.0785 0.446 B_Intermediate L2
ENSG00000132849 PATJ 636509 sc-eQTL 3.25e-02 -0.181 0.0841 0.446 B_Intermediate L2
ENSG00000162604 TM2D1 653492 sc-eQTL 6.09e-01 -0.0456 0.0891 0.446 B_Intermediate L2
ENSG00000162607 USP1 -57382 sc-eQTL 7.98e-01 0.024 0.0933 0.446 B_Intermediate L2
ENSG00000088035 ALG6 -988660 sc-eQTL 1.12e-01 0.151 0.0944 0.45 B_Memory L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.61e-01 0.0814 0.0889 0.45 B_Memory L2
ENSG00000125703 ATG4C -405217 sc-eQTL 6.20e-01 0.042 0.0846 0.45 B_Memory L2
ENSG00000132849 PATJ 636509 sc-eQTL 1.30e-01 -0.128 0.0841 0.45 B_Memory L2
ENSG00000162604 TM2D1 653492 sc-eQTL 7.01e-01 0.0365 0.095 0.45 B_Memory L2
ENSG00000162607 USP1 -57382 sc-eQTL 1.92e-01 -0.127 0.0973 0.45 B_Memory L2
ENSG00000088035 ALG6 -988660 sc-eQTL 6.36e-01 0.0454 0.0957 0.449 B_Naive1 L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 5.94e-01 0.0489 0.0916 0.449 B_Naive1 L2
ENSG00000125703 ATG4C -405217 sc-eQTL 4.34e-01 -0.0553 0.0705 0.449 B_Naive1 L2
ENSG00000132849 PATJ 636509 sc-eQTL 5.35e-01 -0.0563 0.0907 0.449 B_Naive1 L2
ENSG00000162604 TM2D1 653492 sc-eQTL 5.29e-01 -0.0525 0.0834 0.449 B_Naive1 L2
ENSG00000162607 USP1 -57382 sc-eQTL 4.10e-01 0.068 0.0823 0.449 B_Naive1 L2
ENSG00000088035 ALG6 -988660 sc-eQTL 1.62e-01 0.136 0.0967 0.451 B_Naive2 L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 4.49e-01 -0.0708 0.0933 0.451 B_Naive2 L2
ENSG00000125703 ATG4C -405217 sc-eQTL 5.85e-01 -0.0492 0.0898 0.451 B_Naive2 L2
ENSG00000132849 PATJ 636509 sc-eQTL 7.01e-01 -0.0353 0.092 0.451 B_Naive2 L2
ENSG00000162604 TM2D1 653492 sc-eQTL 2.90e-02 0.202 0.092 0.451 B_Naive2 L2
ENSG00000162607 USP1 -57382 sc-eQTL 3.20e-01 -0.0923 0.0926 0.451 B_Naive2 L2
ENSG00000088035 ALG6 -988660 sc-eQTL 4.26e-01 0.0803 0.101 0.452 CD4_CTL L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.66e-01 -0.0796 0.088 0.452 CD4_CTL L2
ENSG00000125703 ATG4C -405217 sc-eQTL 9.67e-01 -0.00372 0.0912 0.452 CD4_CTL L2
ENSG00000132849 PATJ 636509 sc-eQTL 6.91e-01 0.0291 0.073 0.452 CD4_CTL L2
ENSG00000162604 TM2D1 653492 sc-eQTL 6.27e-01 -0.0454 0.0933 0.452 CD4_CTL L2
ENSG00000162607 USP1 -57382 sc-eQTL 5.53e-01 -0.0551 0.0928 0.452 CD4_CTL L2
ENSG00000088035 ALG6 -988660 sc-eQTL 8.48e-01 -0.0162 0.0847 0.449 CD4_Naive L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 1.40e-01 0.123 0.0828 0.449 CD4_Naive L2
ENSG00000125703 ATG4C -405217 sc-eQTL 2.87e-01 -0.0782 0.0734 0.449 CD4_Naive L2
ENSG00000132849 PATJ 636509 sc-eQTL 1.69e-01 -0.0709 0.0514 0.449 CD4_Naive L2
ENSG00000162604 TM2D1 653492 sc-eQTL 2.95e-01 -0.0777 0.0741 0.449 CD4_Naive L2
ENSG00000162607 USP1 -57382 sc-eQTL 6.82e-01 0.0282 0.0687 0.449 CD4_Naive L2
ENSG00000088035 ALG6 -988660 sc-eQTL 2.86e-02 0.205 0.093 0.449 CD4_TCM L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 6.46e-01 0.0383 0.0833 0.449 CD4_TCM L2
ENSG00000125703 ATG4C -405217 sc-eQTL 4.79e-01 -0.0575 0.081 0.449 CD4_TCM L2
ENSG00000132849 PATJ 636509 sc-eQTL 4.37e-01 -0.0506 0.065 0.449 CD4_TCM L2
ENSG00000162604 TM2D1 653492 sc-eQTL 2.75e-01 0.0828 0.0757 0.449 CD4_TCM L2
ENSG00000162607 USP1 -57382 sc-eQTL 9.92e-01 0.000767 0.0784 0.449 CD4_TCM L2
ENSG00000088035 ALG6 -988660 sc-eQTL 9.32e-02 0.161 0.0955 0.449 CD4_TEM L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 6.66e-01 0.0405 0.0936 0.449 CD4_TEM L2
ENSG00000125703 ATG4C -405217 sc-eQTL 4.69e-01 -0.0659 0.0909 0.449 CD4_TEM L2
ENSG00000132849 PATJ 636509 sc-eQTL 3.14e-02 -0.182 0.0839 0.449 CD4_TEM L2
ENSG00000162604 TM2D1 653492 sc-eQTL 7.40e-01 -0.0297 0.0893 0.449 CD4_TEM L2
ENSG00000162607 USP1 -57382 sc-eQTL 8.70e-01 -0.0145 0.089 0.449 CD4_TEM L2
ENSG00000088035 ALG6 -988660 sc-eQTL 8.73e-01 0.0147 0.0916 0.449 CD8_CTL L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 1.12e-01 -0.138 0.0864 0.449 CD8_CTL L2
ENSG00000125703 ATG4C -405217 sc-eQTL 2.49e-01 -0.107 0.0922 0.449 CD8_CTL L2
ENSG00000132849 PATJ 636509 sc-eQTL 4.59e-01 -0.0649 0.0875 0.449 CD8_CTL L2
ENSG00000162604 TM2D1 653492 sc-eQTL 7.99e-01 0.0205 0.0804 0.449 CD8_CTL L2
ENSG00000162607 USP1 -57382 sc-eQTL 8.77e-01 0.0134 0.0861 0.449 CD8_CTL L2
ENSG00000088035 ALG6 -988660 sc-eQTL 3.07e-01 0.0934 0.0912 0.449 CD8_Naive L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 1.98e-02 0.219 0.0933 0.449 CD8_Naive L2
ENSG00000125703 ATG4C -405217 sc-eQTL 2.18e-01 -0.112 0.0904 0.449 CD8_Naive L2
ENSG00000132849 PATJ 636509 sc-eQTL 3.40e-01 -0.0662 0.0692 0.449 CD8_Naive L2
ENSG00000162604 TM2D1 653492 sc-eQTL 9.84e-01 0.00166 0.0847 0.449 CD8_Naive L2
ENSG00000162607 USP1 -57382 sc-eQTL 3.73e-01 0.0692 0.0775 0.449 CD8_Naive L2
ENSG00000088035 ALG6 -988660 sc-eQTL 7.61e-01 -0.0296 0.0973 0.463 CD8_TCM L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.60e-01 -0.087 0.0947 0.463 CD8_TCM L2
ENSG00000125703 ATG4C -405217 sc-eQTL 5.22e-01 0.0622 0.097 0.463 CD8_TCM L2
ENSG00000132849 PATJ 636509 sc-eQTL 5.87e-01 -0.0486 0.0893 0.463 CD8_TCM L2
ENSG00000162604 TM2D1 653492 sc-eQTL 2.61e-01 0.102 0.0905 0.463 CD8_TCM L2
ENSG00000162607 USP1 -57382 sc-eQTL 8.60e-01 -0.0161 0.0908 0.463 CD8_TCM L2
ENSG00000088035 ALG6 -988660 sc-eQTL 3.38e-01 -0.0961 0.1 0.441 CD8_TEM L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.48e-01 -0.0912 0.097 0.441 CD8_TEM L2
ENSG00000125703 ATG4C -405217 sc-eQTL 5.65e-01 0.0538 0.0933 0.441 CD8_TEM L2
ENSG00000132849 PATJ 636509 sc-eQTL 7.62e-01 -0.0287 0.0946 0.441 CD8_TEM L2
ENSG00000162604 TM2D1 653492 sc-eQTL 6.39e-01 -0.0453 0.0963 0.441 CD8_TEM L2
ENSG00000162607 USP1 -57382 sc-eQTL 3.53e-01 0.0897 0.0963 0.441 CD8_TEM L2
ENSG00000088035 ALG6 -988660 sc-eQTL 1.43e-01 0.132 0.09 0.45 MAIT L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 5.32e-01 0.0542 0.0866 0.45 MAIT L2
ENSG00000125703 ATG4C -405217 sc-eQTL 6.75e-01 -0.0384 0.0914 0.45 MAIT L2
ENSG00000132849 PATJ 636509 sc-eQTL 7.85e-01 0.0211 0.0773 0.45 MAIT L2
ENSG00000162604 TM2D1 653492 sc-eQTL 3.32e-01 -0.0853 0.0877 0.45 MAIT L2
ENSG00000162607 USP1 -57382 sc-eQTL 6.79e-01 -0.0376 0.0908 0.45 MAIT L2
ENSG00000088035 ALG6 -988660 sc-eQTL 5.96e-01 -0.051 0.0962 0.444 NK_CD56bright L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 7.38e-01 -0.0279 0.0834 0.444 NK_CD56bright L2
ENSG00000125703 ATG4C -405217 sc-eQTL 8.21e-01 0.0211 0.0931 0.444 NK_CD56bright L2
ENSG00000132849 PATJ 636509 sc-eQTL 9.94e-01 -0.000699 0.0913 0.444 NK_CD56bright L2
ENSG00000162604 TM2D1 653492 sc-eQTL 6.59e-01 -0.0411 0.0929 0.444 NK_CD56bright L2
ENSG00000162607 USP1 -57382 sc-eQTL 8.78e-01 -0.0154 0.1 0.444 NK_CD56bright L2
ENSG00000088035 ALG6 -988660 sc-eQTL 1.71e-03 0.292 0.0918 0.45 NK_CD56dim L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 8.07e-01 -0.02 0.0818 0.45 NK_CD56dim L2
ENSG00000125703 ATG4C -405217 sc-eQTL 2.25e-01 0.101 0.0828 0.45 NK_CD56dim L2
ENSG00000132849 PATJ 636509 sc-eQTL 6.71e-01 0.0383 0.0901 0.45 NK_CD56dim L2
ENSG00000162604 TM2D1 653492 sc-eQTL 4.36e-01 0.0667 0.0854 0.45 NK_CD56dim L2
ENSG00000162607 USP1 -57382 sc-eQTL 3.37e-01 0.0881 0.0915 0.45 NK_CD56dim L2
ENSG00000088035 ALG6 -988660 sc-eQTL 5.83e-01 -0.0575 0.104 0.443 NK_HLA L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.56e-02 -0.167 0.079 0.443 NK_HLA L2
ENSG00000125703 ATG4C -405217 sc-eQTL 4.09e-01 -0.0769 0.0928 0.443 NK_HLA L2
ENSG00000132849 PATJ 636509 sc-eQTL 4.32e-01 0.0679 0.0861 0.443 NK_HLA L2
ENSG00000162604 TM2D1 653492 sc-eQTL 2.34e-01 -0.117 0.0977 0.443 NK_HLA L2
ENSG00000162607 USP1 -57382 sc-eQTL 4.18e-01 -0.0827 0.102 0.443 NK_HLA L2
ENSG00000088035 ALG6 -988660 sc-eQTL 6.65e-01 -0.0393 0.0907 0.45 NK_cytokine L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 9.43e-01 -0.00598 0.0841 0.45 NK_cytokine L2
ENSG00000125703 ATG4C -405217 sc-eQTL 4.91e-01 -0.0593 0.0859 0.45 NK_cytokine L2
ENSG00000132849 PATJ 636509 sc-eQTL 8.06e-01 0.0223 0.0907 0.45 NK_cytokine L2
ENSG00000162604 TM2D1 653492 sc-eQTL 9.38e-01 0.00695 0.0887 0.45 NK_cytokine L2
ENSG00000162607 USP1 -57382 sc-eQTL 3.14e-01 -0.0944 0.0934 0.45 NK_cytokine L2
ENSG00000088035 ALG6 -988660 sc-eQTL 2.51e-01 -0.146 0.127 0.459 PB L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 2.40e-01 -0.16 0.135 0.459 PB L2
ENSG00000125703 ATG4C -405217 sc-eQTL 5.18e-01 -0.0769 0.119 0.459 PB L2
ENSG00000132849 PATJ 636509 sc-eQTL 3.61e-01 -0.113 0.123 0.459 PB L2
ENSG00000162604 TM2D1 653492 sc-eQTL 1.68e-01 0.165 0.119 0.459 PB L2
ENSG00000162607 USP1 -57382 sc-eQTL 2.93e-03 -0.345 0.113 0.459 PB L2
ENSG00000088035 ALG6 -988660 sc-eQTL 4.49e-01 0.0689 0.0908 0.448 Pro_T L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 9.43e-01 -0.00653 0.0912 0.448 Pro_T L2
ENSG00000125703 ATG4C -405217 sc-eQTL 6.18e-01 0.0399 0.0798 0.448 Pro_T L2
ENSG00000132849 PATJ 636509 sc-eQTL 7.83e-01 0.0241 0.0871 0.448 Pro_T L2
ENSG00000162604 TM2D1 653492 sc-eQTL 1.00e-01 0.16 0.097 0.448 Pro_T L2
ENSG00000162607 USP1 -57382 sc-eQTL 3.73e-01 0.049 0.055 0.448 Pro_T L2
ENSG00000088035 ALG6 -988660 sc-eQTL 6.31e-01 0.047 0.0979 0.449 Treg L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 2.42e-01 -0.105 0.0896 0.449 Treg L2
ENSG00000125703 ATG4C -405217 sc-eQTL 5.67e-01 0.0526 0.0918 0.449 Treg L2
ENSG00000132849 PATJ 636509 sc-eQTL 8.15e-01 0.0199 0.0851 0.449 Treg L2
ENSG00000162604 TM2D1 653492 sc-eQTL 1.81e-01 -0.125 0.0933 0.449 Treg L2
ENSG00000162607 USP1 -57382 sc-eQTL 9.90e-01 -0.00117 0.093 0.449 Treg L2
ENSG00000088035 ALG6 -988660 sc-eQTL 9.26e-01 0.00842 0.091 0.449 cDC L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 4.28e-01 -0.0708 0.0891 0.449 cDC L2
ENSG00000125703 ATG4C -405217 sc-eQTL 8.98e-01 -0.00991 0.0775 0.449 cDC L2
ENSG00000162604 TM2D1 653492 sc-eQTL 1.88e-01 -0.127 0.0964 0.449 cDC L2
ENSG00000162607 USP1 -57382 sc-eQTL 7.77e-01 0.0248 0.0875 0.449 cDC L2
ENSG00000088035 ALG6 -988660 sc-eQTL 2.97e-01 0.0913 0.0873 0.449 cMono_IL1B L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 1.83e-02 0.217 0.091 0.449 cMono_IL1B L2
ENSG00000125703 ATG4C -405217 sc-eQTL 3.93e-01 -0.0554 0.0648 0.449 cMono_IL1B L2
ENSG00000162604 TM2D1 653492 sc-eQTL 6.06e-01 -0.0345 0.0669 0.449 cMono_IL1B L2
ENSG00000162607 USP1 -57382 sc-eQTL 6.74e-01 0.0341 0.081 0.449 cMono_IL1B L2
ENSG00000240563 L1TD1 184066 sc-eQTL 6.46e-01 0.0375 0.0814 0.449 cMono_IL1B L2
ENSG00000088035 ALG6 -988660 sc-eQTL 9.67e-01 0.00406 0.0977 0.449 cMono_S100A L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 1.70e-01 0.124 0.0901 0.449 cMono_S100A L2
ENSG00000125703 ATG4C -405217 sc-eQTL 2.81e-01 -0.0845 0.0782 0.449 cMono_S100A L2
ENSG00000162604 TM2D1 653492 sc-eQTL 3.19e-01 -0.0797 0.0798 0.449 cMono_S100A L2
ENSG00000162607 USP1 -57382 sc-eQTL 2.97e-01 -0.0948 0.0908 0.449 cMono_S100A L2
ENSG00000240563 L1TD1 184066 sc-eQTL 3.66e-02 -0.158 0.0749 0.449 cMono_S100A L2
ENSG00000088035 ALG6 -988660 sc-eQTL 1.76e-01 0.151 0.111 0.445 gdT L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 6.18e-01 -0.0548 0.109 0.445 gdT L2
ENSG00000125703 ATG4C -405217 sc-eQTL 3.21e-01 0.104 0.104 0.445 gdT L2
ENSG00000132849 PATJ 636509 sc-eQTL 5.32e-01 0.0639 0.102 0.445 gdT L2
ENSG00000162604 TM2D1 653492 sc-eQTL 4.71e-01 -0.0777 0.107 0.445 gdT L2
ENSG00000162607 USP1 -57382 sc-eQTL 7.65e-01 -0.0315 0.105 0.445 gdT L2
ENSG00000088035 ALG6 -988660 sc-eQTL 5.39e-01 0.0566 0.0919 0.444 intMono L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 4.78e-01 -0.0667 0.0939 0.444 intMono L2
ENSG00000125703 ATG4C -405217 sc-eQTL 7.02e-01 0.0344 0.0897 0.444 intMono L2
ENSG00000162604 TM2D1 653492 sc-eQTL 4.89e-01 -0.0657 0.0949 0.444 intMono L2
ENSG00000162607 USP1 -57382 sc-eQTL 2.51e-01 -0.115 0.1 0.444 intMono L2
ENSG00000240563 L1TD1 184066 sc-eQTL 7.23e-01 0.0262 0.0739 0.444 intMono L2
ENSG00000088035 ALG6 -988660 sc-eQTL 7.60e-01 -0.0297 0.0972 0.441 ncMono L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.69e-01 0.0861 0.0955 0.441 ncMono L2
ENSG00000125703 ATG4C -405217 sc-eQTL 4.00e-01 0.0753 0.0892 0.441 ncMono L2
ENSG00000162604 TM2D1 653492 sc-eQTL 9.07e-01 -0.0113 0.0964 0.441 ncMono L2
ENSG00000162607 USP1 -57382 sc-eQTL 5.72e-01 0.0541 0.0955 0.441 ncMono L2
ENSG00000240563 L1TD1 184066 sc-eQTL 2.67e-01 0.0752 0.0676 0.441 ncMono L2
ENSG00000088035 ALG6 -988660 sc-eQTL 2.51e-02 0.224 0.0992 0.444 pDC L2
ENSG00000116641 DOCK7 -309471 sc-eQTL 4.04e-01 0.086 0.103 0.444 pDC L2
ENSG00000125703 ATG4C -405217 sc-eQTL 6.34e-01 0.0441 0.0923 0.444 pDC L2
ENSG00000162604 TM2D1 653492 sc-eQTL 2.35e-01 -0.107 0.0901 0.444 pDC L2
ENSG00000162607 USP1 -57382 sc-eQTL 9.43e-01 0.00761 0.106 0.444 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -988660 sc-eQTL 2.12e-01 0.123 0.0979 0.449 B_Memory LOneK1K
ENSG00000116641 DOCK7 -309471 sc-eQTL 9.44e-01 0.00602 0.0853 0.449 B_Memory LOneK1K
ENSG00000125703 ATG4C -405217 sc-eQTL 8.12e-01 -0.0164 0.0689 0.449 B_Memory LOneK1K
ENSG00000132849 PATJ 636509 sc-eQTL 5.10e-03 -0.212 0.0749 0.449 B_Memory LOneK1K
ENSG00000162604 TM2D1 653492 sc-eQTL 9.26e-01 -0.00809 0.0867 0.449 B_Memory LOneK1K
ENSG00000162607 USP1 -57382 sc-eQTL 3.18e-01 -0.0879 0.0877 0.449 B_Memory LOneK1K
ENSG00000088035 ALG6 -988660 sc-eQTL 2.10e-01 0.119 0.095 0.449 B_Naive LOneK1K
ENSG00000116641 DOCK7 -309471 sc-eQTL 8.97e-01 -0.0115 0.0891 0.449 B_Naive LOneK1K
ENSG00000125703 ATG4C -405217 sc-eQTL 1.36e-01 -0.101 0.0676 0.449 B_Naive LOneK1K
ENSG00000132849 PATJ 636509 sc-eQTL 4.90e-01 -0.0561 0.0812 0.449 B_Naive LOneK1K
ENSG00000162604 TM2D1 653492 sc-eQTL 6.15e-01 0.0391 0.0775 0.449 B_Naive LOneK1K
ENSG00000162607 USP1 -57382 sc-eQTL 8.89e-01 -0.0115 0.0825 0.449 B_Naive LOneK1K
ENSG00000088035 ALG6 -988660 sc-eQTL 3.82e-01 0.0755 0.0862 0.449 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.19e-02 0.186 0.086 0.449 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -405217 sc-eQTL 1.02e-01 -0.0981 0.0597 0.449 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 653492 sc-eQTL 3.45e-01 -0.0592 0.0626 0.449 CD14_Mono LOneK1K
ENSG00000162607 USP1 -57382 sc-eQTL 7.12e-01 -0.0281 0.076 0.449 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 184066 sc-eQTL 6.42e-01 -0.0383 0.0824 0.449 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -988660 sc-eQTL 5.31e-01 0.0607 0.0968 0.446 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -309471 sc-eQTL 3.18e-01 0.0956 0.0956 0.446 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -405217 sc-eQTL 1.22e-01 0.126 0.0812 0.446 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 653492 sc-eQTL 5.76e-01 -0.0535 0.0955 0.446 CD16_Mono LOneK1K
ENSG00000162607 USP1 -57382 sc-eQTL 6.84e-01 -0.0363 0.0891 0.446 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 184066 sc-eQTL 3.65e-01 0.055 0.0607 0.446 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -988660 sc-eQTL 3.18e-02 0.184 0.0853 0.45 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -309471 sc-eQTL 4.35e-01 -0.0603 0.0771 0.45 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -405217 sc-eQTL 6.06e-01 0.0398 0.0771 0.45 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 636509 sc-eQTL 5.82e-01 0.0457 0.083 0.45 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 653492 sc-eQTL 3.69e-01 0.0685 0.076 0.45 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -57382 sc-eQTL 9.96e-01 0.000368 0.083 0.45 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -309453 eQTL 0.0472 0.0475 0.0239 0.00775 0.0 0.446
ENSG00000240563 L1TD1 184066 eQTL 0.0222 0.0953 0.0416 0.0 0.0 0.446

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162607 \N -57382 1.11e-05 1.28e-05 2.49e-06 7.53e-06 2.42e-06 5.83e-06 1.55e-05 2.14e-06 1.18e-05 5.9e-06 1.58e-05 6.61e-06 2.01e-05 4.45e-06 3.88e-06 7.31e-06 6.74e-06 1e-05 3.62e-06 3.12e-06 6.79e-06 1.14e-05 1.1e-05 3.78e-06 2.14e-05 4.55e-06 6.68e-06 5.32e-06 1.37e-05 1.06e-05 8.5e-06 1.06e-06 1.29e-06 3.8e-06 5.46e-06 3e-06 1.76e-06 2.15e-06 2.25e-06 1.42e-06 1.05e-06 1.51e-05 1.84e-06 3.18e-07 9.15e-07 2.02e-06 1.91e-06 8.27e-07 4.59e-07
ENSG00000240563 L1TD1 184066 3.97e-06 4.3e-06 8.3e-07 2.1e-06 1.27e-06 1.29e-06 2.79e-06 8.89e-07 3.19e-06 1.73e-06 4.22e-06 2.94e-06 6.48e-06 1.36e-06 1.3e-06 2.37e-06 1.83e-06 2.54e-06 1.38e-06 8.79e-07 1.99e-06 3.96e-06 3.24e-06 1.85e-06 4.89e-06 1.14e-06 1.96e-06 1.55e-06 3.81e-06 3.1e-06 1.96e-06 4.2e-07 7.93e-07 1.73e-06 1.92e-06 9.6e-07 9.82e-07 4.08e-07 1.29e-06 3.22e-07 2.79e-07 4.49e-06 4.01e-07 1.66e-07 4.06e-07 3.75e-07 7.59e-07 4.59e-07 3.34e-07