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Genes within 1Mb (chr1:62377904:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -989671 sc-eQTL 3.52e-01 0.0772 0.0828 0.449 B L1
ENSG00000116641 DOCK7 -310482 sc-eQTL 8.91e-01 -0.0114 0.083 0.449 B L1
ENSG00000125703 ATG4C -406228 sc-eQTL 4.67e-01 -0.042 0.0576 0.449 B L1
ENSG00000132849 PATJ 635498 sc-eQTL 4.87e-02 -0.138 0.0694 0.449 B L1
ENSG00000162604 TM2D1 652481 sc-eQTL 2.97e-01 0.0729 0.0697 0.449 B L1
ENSG00000162607 USP1 -58393 sc-eQTL 4.72e-01 -0.0574 0.0796 0.449 B L1
ENSG00000088035 ALG6 -989671 sc-eQTL 2.45e-01 0.0891 0.0764 0.449 CD4T L1
ENSG00000116641 DOCK7 -310482 sc-eQTL 4.12e-01 0.0637 0.0775 0.449 CD4T L1
ENSG00000125703 ATG4C -406228 sc-eQTL 3.16e-01 -0.0628 0.0625 0.449 CD4T L1
ENSG00000132849 PATJ 635498 sc-eQTL 3.86e-02 -0.105 0.0503 0.449 CD4T L1
ENSG00000162604 TM2D1 652481 sc-eQTL 4.36e-01 -0.0482 0.0617 0.449 CD4T L1
ENSG00000162607 USP1 -58393 sc-eQTL 9.65e-01 -0.00264 0.0608 0.449 CD4T L1
ENSG00000088035 ALG6 -989671 sc-eQTL 5.53e-01 0.0502 0.0845 0.449 CD8T L1
ENSG00000116641 DOCK7 -310482 sc-eQTL 9.97e-01 -0.000312 0.0856 0.449 CD8T L1
ENSG00000125703 ATG4C -406228 sc-eQTL 5.25e-01 -0.0517 0.0813 0.449 CD8T L1
ENSG00000132849 PATJ 635498 sc-eQTL 4.10e-01 -0.0409 0.0495 0.449 CD8T L1
ENSG00000162604 TM2D1 652481 sc-eQTL 5.45e-01 0.0452 0.0744 0.449 CD8T L1
ENSG00000162607 USP1 -58393 sc-eQTL 5.04e-01 0.0473 0.0708 0.449 CD8T L1
ENSG00000088035 ALG6 -989671 sc-eQTL 2.98e-01 0.0913 0.0875 0.455 DC L1
ENSG00000116641 DOCK7 -310482 sc-eQTL 9.11e-01 0.0101 0.0899 0.455 DC L1
ENSG00000125703 ATG4C -406228 sc-eQTL 8.95e-01 0.00933 0.0704 0.455 DC L1
ENSG00000162604 TM2D1 652481 sc-eQTL 7.77e-02 -0.144 0.0813 0.455 DC L1
ENSG00000162607 USP1 -58393 sc-eQTL 8.90e-01 -0.0119 0.0859 0.455 DC L1
ENSG00000088035 ALG6 -989671 sc-eQTL 3.09e-01 0.0888 0.087 0.449 Mono L1
ENSG00000116641 DOCK7 -310482 sc-eQTL 2.04e-02 0.195 0.0833 0.449 Mono L1
ENSG00000125703 ATG4C -406228 sc-eQTL 3.19e-01 -0.0568 0.0569 0.449 Mono L1
ENSG00000162604 TM2D1 652481 sc-eQTL 2.63e-01 -0.0708 0.0631 0.449 Mono L1
ENSG00000162607 USP1 -58393 sc-eQTL 1.51e-01 -0.106 0.0736 0.449 Mono L1
ENSG00000240563 L1TD1 183055 sc-eQTL 6.67e-01 0.0297 0.069 0.449 Mono L1
ENSG00000088035 ALG6 -989671 sc-eQTL 1.04e-01 0.135 0.0829 0.448 NK L1
ENSG00000116641 DOCK7 -310482 sc-eQTL 1.64e-01 -0.0956 0.0684 0.448 NK L1
ENSG00000125703 ATG4C -406228 sc-eQTL 8.06e-01 0.0181 0.0737 0.448 NK L1
ENSG00000132849 PATJ 635498 sc-eQTL 6.73e-01 0.0305 0.0723 0.448 NK L1
ENSG00000162604 TM2D1 652481 sc-eQTL 3.88e-01 0.0639 0.0739 0.448 NK L1
ENSG00000162607 USP1 -58393 sc-eQTL 7.52e-01 0.026 0.0819 0.448 NK L1
ENSG00000088035 ALG6 -989671 sc-eQTL 5.66e-01 0.046 0.08 0.449 Other_T L1
ENSG00000116641 DOCK7 -310482 sc-eQTL 1.21e-01 -0.126 0.0813 0.449 Other_T L1
ENSG00000125703 ATG4C -406228 sc-eQTL 8.82e-01 -0.0105 0.0708 0.449 Other_T L1
ENSG00000132849 PATJ 635498 sc-eQTL 4.34e-01 0.0516 0.0658 0.449 Other_T L1
ENSG00000162604 TM2D1 652481 sc-eQTL 9.34e-01 0.00644 0.0773 0.449 Other_T L1
ENSG00000162607 USP1 -58393 sc-eQTL 5.85e-01 -0.0297 0.0544 0.449 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -989671 sc-eQTL 1.81e-01 -0.137 0.102 0.441 B_Activated L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 2.11e-02 0.218 0.0938 0.441 B_Activated L2
ENSG00000125703 ATG4C -406228 sc-eQTL 8.96e-01 0.0131 0.1 0.441 B_Activated L2
ENSG00000132849 PATJ 635498 sc-eQTL 6.71e-01 0.0362 0.0851 0.441 B_Activated L2
ENSG00000162604 TM2D1 652481 sc-eQTL 1.66e-02 0.257 0.106 0.441 B_Activated L2
ENSG00000162607 USP1 -58393 sc-eQTL 6.41e-01 0.0496 0.106 0.441 B_Activated L2
ENSG00000088035 ALG6 -989671 sc-eQTL 6.91e-01 -0.0386 0.097 0.446 B_Intermediate L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 8.83e-01 -0.0136 0.0927 0.446 B_Intermediate L2
ENSG00000125703 ATG4C -406228 sc-eQTL 7.63e-01 -0.0237 0.0785 0.446 B_Intermediate L2
ENSG00000132849 PATJ 635498 sc-eQTL 3.25e-02 -0.181 0.0841 0.446 B_Intermediate L2
ENSG00000162604 TM2D1 652481 sc-eQTL 6.09e-01 -0.0456 0.0891 0.446 B_Intermediate L2
ENSG00000162607 USP1 -58393 sc-eQTL 7.98e-01 0.024 0.0933 0.446 B_Intermediate L2
ENSG00000088035 ALG6 -989671 sc-eQTL 1.12e-01 0.151 0.0944 0.45 B_Memory L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.61e-01 0.0814 0.0889 0.45 B_Memory L2
ENSG00000125703 ATG4C -406228 sc-eQTL 6.20e-01 0.042 0.0846 0.45 B_Memory L2
ENSG00000132849 PATJ 635498 sc-eQTL 1.30e-01 -0.128 0.0841 0.45 B_Memory L2
ENSG00000162604 TM2D1 652481 sc-eQTL 7.01e-01 0.0365 0.095 0.45 B_Memory L2
ENSG00000162607 USP1 -58393 sc-eQTL 1.92e-01 -0.127 0.0973 0.45 B_Memory L2
ENSG00000088035 ALG6 -989671 sc-eQTL 6.36e-01 0.0454 0.0957 0.449 B_Naive1 L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 5.94e-01 0.0489 0.0916 0.449 B_Naive1 L2
ENSG00000125703 ATG4C -406228 sc-eQTL 4.34e-01 -0.0553 0.0705 0.449 B_Naive1 L2
ENSG00000132849 PATJ 635498 sc-eQTL 5.35e-01 -0.0563 0.0907 0.449 B_Naive1 L2
ENSG00000162604 TM2D1 652481 sc-eQTL 5.29e-01 -0.0525 0.0834 0.449 B_Naive1 L2
ENSG00000162607 USP1 -58393 sc-eQTL 4.10e-01 0.068 0.0823 0.449 B_Naive1 L2
ENSG00000088035 ALG6 -989671 sc-eQTL 1.62e-01 0.136 0.0967 0.451 B_Naive2 L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 4.49e-01 -0.0708 0.0933 0.451 B_Naive2 L2
ENSG00000125703 ATG4C -406228 sc-eQTL 5.85e-01 -0.0492 0.0898 0.451 B_Naive2 L2
ENSG00000132849 PATJ 635498 sc-eQTL 7.01e-01 -0.0353 0.092 0.451 B_Naive2 L2
ENSG00000162604 TM2D1 652481 sc-eQTL 2.90e-02 0.202 0.092 0.451 B_Naive2 L2
ENSG00000162607 USP1 -58393 sc-eQTL 3.20e-01 -0.0923 0.0926 0.451 B_Naive2 L2
ENSG00000088035 ALG6 -989671 sc-eQTL 4.26e-01 0.0803 0.101 0.452 CD4_CTL L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.66e-01 -0.0796 0.088 0.452 CD4_CTL L2
ENSG00000125703 ATG4C -406228 sc-eQTL 9.67e-01 -0.00372 0.0912 0.452 CD4_CTL L2
ENSG00000132849 PATJ 635498 sc-eQTL 6.91e-01 0.0291 0.073 0.452 CD4_CTL L2
ENSG00000162604 TM2D1 652481 sc-eQTL 6.27e-01 -0.0454 0.0933 0.452 CD4_CTL L2
ENSG00000162607 USP1 -58393 sc-eQTL 5.53e-01 -0.0551 0.0928 0.452 CD4_CTL L2
ENSG00000088035 ALG6 -989671 sc-eQTL 8.48e-01 -0.0162 0.0847 0.449 CD4_Naive L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 1.40e-01 0.123 0.0828 0.449 CD4_Naive L2
ENSG00000125703 ATG4C -406228 sc-eQTL 2.87e-01 -0.0782 0.0734 0.449 CD4_Naive L2
ENSG00000132849 PATJ 635498 sc-eQTL 1.69e-01 -0.0709 0.0514 0.449 CD4_Naive L2
ENSG00000162604 TM2D1 652481 sc-eQTL 2.95e-01 -0.0777 0.0741 0.449 CD4_Naive L2
ENSG00000162607 USP1 -58393 sc-eQTL 6.82e-01 0.0282 0.0687 0.449 CD4_Naive L2
ENSG00000088035 ALG6 -989671 sc-eQTL 2.86e-02 0.205 0.093 0.449 CD4_TCM L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 6.46e-01 0.0383 0.0833 0.449 CD4_TCM L2
ENSG00000125703 ATG4C -406228 sc-eQTL 4.79e-01 -0.0575 0.081 0.449 CD4_TCM L2
ENSG00000132849 PATJ 635498 sc-eQTL 4.37e-01 -0.0506 0.065 0.449 CD4_TCM L2
ENSG00000162604 TM2D1 652481 sc-eQTL 2.75e-01 0.0828 0.0757 0.449 CD4_TCM L2
ENSG00000162607 USP1 -58393 sc-eQTL 9.92e-01 0.000767 0.0784 0.449 CD4_TCM L2
ENSG00000088035 ALG6 -989671 sc-eQTL 9.32e-02 0.161 0.0955 0.449 CD4_TEM L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 6.66e-01 0.0405 0.0936 0.449 CD4_TEM L2
ENSG00000125703 ATG4C -406228 sc-eQTL 4.69e-01 -0.0659 0.0909 0.449 CD4_TEM L2
ENSG00000132849 PATJ 635498 sc-eQTL 3.14e-02 -0.182 0.0839 0.449 CD4_TEM L2
ENSG00000162604 TM2D1 652481 sc-eQTL 7.40e-01 -0.0297 0.0893 0.449 CD4_TEM L2
ENSG00000162607 USP1 -58393 sc-eQTL 8.70e-01 -0.0145 0.089 0.449 CD4_TEM L2
ENSG00000088035 ALG6 -989671 sc-eQTL 8.73e-01 0.0147 0.0916 0.449 CD8_CTL L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 1.12e-01 -0.138 0.0864 0.449 CD8_CTL L2
ENSG00000125703 ATG4C -406228 sc-eQTL 2.49e-01 -0.107 0.0922 0.449 CD8_CTL L2
ENSG00000132849 PATJ 635498 sc-eQTL 4.59e-01 -0.0649 0.0875 0.449 CD8_CTL L2
ENSG00000162604 TM2D1 652481 sc-eQTL 7.99e-01 0.0205 0.0804 0.449 CD8_CTL L2
ENSG00000162607 USP1 -58393 sc-eQTL 8.77e-01 0.0134 0.0861 0.449 CD8_CTL L2
ENSG00000088035 ALG6 -989671 sc-eQTL 3.07e-01 0.0934 0.0912 0.449 CD8_Naive L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 1.98e-02 0.219 0.0933 0.449 CD8_Naive L2
ENSG00000125703 ATG4C -406228 sc-eQTL 2.18e-01 -0.112 0.0904 0.449 CD8_Naive L2
ENSG00000132849 PATJ 635498 sc-eQTL 3.40e-01 -0.0662 0.0692 0.449 CD8_Naive L2
ENSG00000162604 TM2D1 652481 sc-eQTL 9.84e-01 0.00166 0.0847 0.449 CD8_Naive L2
ENSG00000162607 USP1 -58393 sc-eQTL 3.73e-01 0.0692 0.0775 0.449 CD8_Naive L2
ENSG00000088035 ALG6 -989671 sc-eQTL 7.61e-01 -0.0296 0.0973 0.463 CD8_TCM L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.60e-01 -0.087 0.0947 0.463 CD8_TCM L2
ENSG00000125703 ATG4C -406228 sc-eQTL 5.22e-01 0.0622 0.097 0.463 CD8_TCM L2
ENSG00000132849 PATJ 635498 sc-eQTL 5.87e-01 -0.0486 0.0893 0.463 CD8_TCM L2
ENSG00000162604 TM2D1 652481 sc-eQTL 2.61e-01 0.102 0.0905 0.463 CD8_TCM L2
ENSG00000162607 USP1 -58393 sc-eQTL 8.60e-01 -0.0161 0.0908 0.463 CD8_TCM L2
ENSG00000088035 ALG6 -989671 sc-eQTL 3.38e-01 -0.0961 0.1 0.441 CD8_TEM L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.48e-01 -0.0912 0.097 0.441 CD8_TEM L2
ENSG00000125703 ATG4C -406228 sc-eQTL 5.65e-01 0.0538 0.0933 0.441 CD8_TEM L2
ENSG00000132849 PATJ 635498 sc-eQTL 7.62e-01 -0.0287 0.0946 0.441 CD8_TEM L2
ENSG00000162604 TM2D1 652481 sc-eQTL 6.39e-01 -0.0453 0.0963 0.441 CD8_TEM L2
ENSG00000162607 USP1 -58393 sc-eQTL 3.53e-01 0.0897 0.0963 0.441 CD8_TEM L2
ENSG00000088035 ALG6 -989671 sc-eQTL 1.43e-01 0.132 0.09 0.45 MAIT L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 5.32e-01 0.0542 0.0866 0.45 MAIT L2
ENSG00000125703 ATG4C -406228 sc-eQTL 6.75e-01 -0.0384 0.0914 0.45 MAIT L2
ENSG00000132849 PATJ 635498 sc-eQTL 7.85e-01 0.0211 0.0773 0.45 MAIT L2
ENSG00000162604 TM2D1 652481 sc-eQTL 3.32e-01 -0.0853 0.0877 0.45 MAIT L2
ENSG00000162607 USP1 -58393 sc-eQTL 6.79e-01 -0.0376 0.0908 0.45 MAIT L2
ENSG00000088035 ALG6 -989671 sc-eQTL 5.96e-01 -0.051 0.0962 0.444 NK_CD56bright L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 7.38e-01 -0.0279 0.0834 0.444 NK_CD56bright L2
ENSG00000125703 ATG4C -406228 sc-eQTL 8.21e-01 0.0211 0.0931 0.444 NK_CD56bright L2
ENSG00000132849 PATJ 635498 sc-eQTL 9.94e-01 -0.000699 0.0913 0.444 NK_CD56bright L2
ENSG00000162604 TM2D1 652481 sc-eQTL 6.59e-01 -0.0411 0.0929 0.444 NK_CD56bright L2
ENSG00000162607 USP1 -58393 sc-eQTL 8.78e-01 -0.0154 0.1 0.444 NK_CD56bright L2
ENSG00000088035 ALG6 -989671 sc-eQTL 1.71e-03 0.292 0.0918 0.45 NK_CD56dim L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 8.07e-01 -0.02 0.0818 0.45 NK_CD56dim L2
ENSG00000125703 ATG4C -406228 sc-eQTL 2.25e-01 0.101 0.0828 0.45 NK_CD56dim L2
ENSG00000132849 PATJ 635498 sc-eQTL 6.71e-01 0.0383 0.0901 0.45 NK_CD56dim L2
ENSG00000162604 TM2D1 652481 sc-eQTL 4.36e-01 0.0667 0.0854 0.45 NK_CD56dim L2
ENSG00000162607 USP1 -58393 sc-eQTL 3.37e-01 0.0881 0.0915 0.45 NK_CD56dim L2
ENSG00000088035 ALG6 -989671 sc-eQTL 5.83e-01 -0.0575 0.104 0.443 NK_HLA L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.56e-02 -0.167 0.079 0.443 NK_HLA L2
ENSG00000125703 ATG4C -406228 sc-eQTL 4.09e-01 -0.0769 0.0928 0.443 NK_HLA L2
ENSG00000132849 PATJ 635498 sc-eQTL 4.32e-01 0.0679 0.0861 0.443 NK_HLA L2
ENSG00000162604 TM2D1 652481 sc-eQTL 2.34e-01 -0.117 0.0977 0.443 NK_HLA L2
ENSG00000162607 USP1 -58393 sc-eQTL 4.18e-01 -0.0827 0.102 0.443 NK_HLA L2
ENSG00000088035 ALG6 -989671 sc-eQTL 6.65e-01 -0.0393 0.0907 0.45 NK_cytokine L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 9.43e-01 -0.00598 0.0841 0.45 NK_cytokine L2
ENSG00000125703 ATG4C -406228 sc-eQTL 4.91e-01 -0.0593 0.0859 0.45 NK_cytokine L2
ENSG00000132849 PATJ 635498 sc-eQTL 8.06e-01 0.0223 0.0907 0.45 NK_cytokine L2
ENSG00000162604 TM2D1 652481 sc-eQTL 9.38e-01 0.00695 0.0887 0.45 NK_cytokine L2
ENSG00000162607 USP1 -58393 sc-eQTL 3.14e-01 -0.0944 0.0934 0.45 NK_cytokine L2
ENSG00000088035 ALG6 -989671 sc-eQTL 2.51e-01 -0.146 0.127 0.459 PB L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 2.40e-01 -0.16 0.135 0.459 PB L2
ENSG00000125703 ATG4C -406228 sc-eQTL 5.18e-01 -0.0769 0.119 0.459 PB L2
ENSG00000132849 PATJ 635498 sc-eQTL 3.61e-01 -0.113 0.123 0.459 PB L2
ENSG00000162604 TM2D1 652481 sc-eQTL 1.68e-01 0.165 0.119 0.459 PB L2
ENSG00000162607 USP1 -58393 sc-eQTL 2.93e-03 -0.345 0.113 0.459 PB L2
ENSG00000088035 ALG6 -989671 sc-eQTL 4.49e-01 0.0689 0.0908 0.448 Pro_T L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 9.43e-01 -0.00653 0.0912 0.448 Pro_T L2
ENSG00000125703 ATG4C -406228 sc-eQTL 6.18e-01 0.0399 0.0798 0.448 Pro_T L2
ENSG00000132849 PATJ 635498 sc-eQTL 7.83e-01 0.0241 0.0871 0.448 Pro_T L2
ENSG00000162604 TM2D1 652481 sc-eQTL 1.00e-01 0.16 0.097 0.448 Pro_T L2
ENSG00000162607 USP1 -58393 sc-eQTL 3.73e-01 0.049 0.055 0.448 Pro_T L2
ENSG00000088035 ALG6 -989671 sc-eQTL 6.31e-01 0.047 0.0979 0.449 Treg L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 2.42e-01 -0.105 0.0896 0.449 Treg L2
ENSG00000125703 ATG4C -406228 sc-eQTL 5.67e-01 0.0526 0.0918 0.449 Treg L2
ENSG00000132849 PATJ 635498 sc-eQTL 8.15e-01 0.0199 0.0851 0.449 Treg L2
ENSG00000162604 TM2D1 652481 sc-eQTL 1.81e-01 -0.125 0.0933 0.449 Treg L2
ENSG00000162607 USP1 -58393 sc-eQTL 9.90e-01 -0.00117 0.093 0.449 Treg L2
ENSG00000088035 ALG6 -989671 sc-eQTL 9.26e-01 0.00842 0.091 0.449 cDC L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 4.28e-01 -0.0708 0.0891 0.449 cDC L2
ENSG00000125703 ATG4C -406228 sc-eQTL 8.98e-01 -0.00991 0.0775 0.449 cDC L2
ENSG00000162604 TM2D1 652481 sc-eQTL 1.88e-01 -0.127 0.0964 0.449 cDC L2
ENSG00000162607 USP1 -58393 sc-eQTL 7.77e-01 0.0248 0.0875 0.449 cDC L2
ENSG00000088035 ALG6 -989671 sc-eQTL 2.97e-01 0.0913 0.0873 0.449 cMono_IL1B L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 1.83e-02 0.217 0.091 0.449 cMono_IL1B L2
ENSG00000125703 ATG4C -406228 sc-eQTL 3.93e-01 -0.0554 0.0648 0.449 cMono_IL1B L2
ENSG00000162604 TM2D1 652481 sc-eQTL 6.06e-01 -0.0345 0.0669 0.449 cMono_IL1B L2
ENSG00000162607 USP1 -58393 sc-eQTL 6.74e-01 0.0341 0.081 0.449 cMono_IL1B L2
ENSG00000240563 L1TD1 183055 sc-eQTL 6.46e-01 0.0375 0.0814 0.449 cMono_IL1B L2
ENSG00000088035 ALG6 -989671 sc-eQTL 9.67e-01 0.00406 0.0977 0.449 cMono_S100A L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 1.70e-01 0.124 0.0901 0.449 cMono_S100A L2
ENSG00000125703 ATG4C -406228 sc-eQTL 2.81e-01 -0.0845 0.0782 0.449 cMono_S100A L2
ENSG00000162604 TM2D1 652481 sc-eQTL 3.19e-01 -0.0797 0.0798 0.449 cMono_S100A L2
ENSG00000162607 USP1 -58393 sc-eQTL 2.97e-01 -0.0948 0.0908 0.449 cMono_S100A L2
ENSG00000240563 L1TD1 183055 sc-eQTL 3.66e-02 -0.158 0.0749 0.449 cMono_S100A L2
ENSG00000088035 ALG6 -989671 sc-eQTL 1.76e-01 0.151 0.111 0.445 gdT L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 6.18e-01 -0.0548 0.109 0.445 gdT L2
ENSG00000125703 ATG4C -406228 sc-eQTL 3.21e-01 0.104 0.104 0.445 gdT L2
ENSG00000132849 PATJ 635498 sc-eQTL 5.32e-01 0.0639 0.102 0.445 gdT L2
ENSG00000162604 TM2D1 652481 sc-eQTL 4.71e-01 -0.0777 0.107 0.445 gdT L2
ENSG00000162607 USP1 -58393 sc-eQTL 7.65e-01 -0.0315 0.105 0.445 gdT L2
ENSG00000088035 ALG6 -989671 sc-eQTL 5.39e-01 0.0566 0.0919 0.444 intMono L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 4.78e-01 -0.0667 0.0939 0.444 intMono L2
ENSG00000125703 ATG4C -406228 sc-eQTL 7.02e-01 0.0344 0.0897 0.444 intMono L2
ENSG00000162604 TM2D1 652481 sc-eQTL 4.89e-01 -0.0657 0.0949 0.444 intMono L2
ENSG00000162607 USP1 -58393 sc-eQTL 2.51e-01 -0.115 0.1 0.444 intMono L2
ENSG00000240563 L1TD1 183055 sc-eQTL 7.23e-01 0.0262 0.0739 0.444 intMono L2
ENSG00000088035 ALG6 -989671 sc-eQTL 7.60e-01 -0.0297 0.0972 0.441 ncMono L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.69e-01 0.0861 0.0955 0.441 ncMono L2
ENSG00000125703 ATG4C -406228 sc-eQTL 4.00e-01 0.0753 0.0892 0.441 ncMono L2
ENSG00000162604 TM2D1 652481 sc-eQTL 9.07e-01 -0.0113 0.0964 0.441 ncMono L2
ENSG00000162607 USP1 -58393 sc-eQTL 5.72e-01 0.0541 0.0955 0.441 ncMono L2
ENSG00000240563 L1TD1 183055 sc-eQTL 2.67e-01 0.0752 0.0676 0.441 ncMono L2
ENSG00000088035 ALG6 -989671 sc-eQTL 2.51e-02 0.224 0.0992 0.444 pDC L2
ENSG00000116641 DOCK7 -310482 sc-eQTL 4.04e-01 0.086 0.103 0.444 pDC L2
ENSG00000125703 ATG4C -406228 sc-eQTL 6.34e-01 0.0441 0.0923 0.444 pDC L2
ENSG00000162604 TM2D1 652481 sc-eQTL 2.35e-01 -0.107 0.0901 0.444 pDC L2
ENSG00000162607 USP1 -58393 sc-eQTL 9.43e-01 0.00761 0.106 0.444 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -989671 sc-eQTL 2.12e-01 0.123 0.0979 0.449 B_Memory LOneK1K
ENSG00000116641 DOCK7 -310482 sc-eQTL 9.44e-01 0.00602 0.0853 0.449 B_Memory LOneK1K
ENSG00000125703 ATG4C -406228 sc-eQTL 8.12e-01 -0.0164 0.0689 0.449 B_Memory LOneK1K
ENSG00000132849 PATJ 635498 sc-eQTL 5.10e-03 -0.212 0.0749 0.449 B_Memory LOneK1K
ENSG00000162604 TM2D1 652481 sc-eQTL 9.26e-01 -0.00809 0.0867 0.449 B_Memory LOneK1K
ENSG00000162607 USP1 -58393 sc-eQTL 3.18e-01 -0.0879 0.0877 0.449 B_Memory LOneK1K
ENSG00000088035 ALG6 -989671 sc-eQTL 2.10e-01 0.119 0.095 0.449 B_Naive LOneK1K
ENSG00000116641 DOCK7 -310482 sc-eQTL 8.97e-01 -0.0115 0.0891 0.449 B_Naive LOneK1K
ENSG00000125703 ATG4C -406228 sc-eQTL 1.36e-01 -0.101 0.0676 0.449 B_Naive LOneK1K
ENSG00000132849 PATJ 635498 sc-eQTL 4.90e-01 -0.0561 0.0812 0.449 B_Naive LOneK1K
ENSG00000162604 TM2D1 652481 sc-eQTL 6.15e-01 0.0391 0.0775 0.449 B_Naive LOneK1K
ENSG00000162607 USP1 -58393 sc-eQTL 8.89e-01 -0.0115 0.0825 0.449 B_Naive LOneK1K
ENSG00000088035 ALG6 -989671 sc-eQTL 3.82e-01 0.0755 0.0862 0.449 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.19e-02 0.186 0.086 0.449 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -406228 sc-eQTL 1.02e-01 -0.0981 0.0597 0.449 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 652481 sc-eQTL 3.45e-01 -0.0592 0.0626 0.449 CD14_Mono LOneK1K
ENSG00000162607 USP1 -58393 sc-eQTL 7.12e-01 -0.0281 0.076 0.449 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 183055 sc-eQTL 6.42e-01 -0.0383 0.0824 0.449 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -989671 sc-eQTL 5.31e-01 0.0607 0.0968 0.446 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -310482 sc-eQTL 3.18e-01 0.0956 0.0956 0.446 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -406228 sc-eQTL 1.22e-01 0.126 0.0812 0.446 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 652481 sc-eQTL 5.76e-01 -0.0535 0.0955 0.446 CD16_Mono LOneK1K
ENSG00000162607 USP1 -58393 sc-eQTL 6.84e-01 -0.0363 0.0891 0.446 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 183055 sc-eQTL 3.65e-01 0.055 0.0607 0.446 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -989671 sc-eQTL 3.18e-02 0.184 0.0853 0.45 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -310482 sc-eQTL 4.35e-01 -0.0603 0.0771 0.45 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -406228 sc-eQTL 6.06e-01 0.0398 0.0771 0.45 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 635498 sc-eQTL 5.82e-01 0.0457 0.083 0.45 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 652481 sc-eQTL 3.69e-01 0.0685 0.076 0.45 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -58393 sc-eQTL 9.96e-01 0.000368 0.083 0.45 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -310464 eQTL 0.0409 0.0489 0.0239 0.00983 0.00112 0.446
ENSG00000240563 L1TD1 183055 eQTL 0.0255 0.093 0.0416 0.0 0.0 0.446

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162607 \N -58393 7.86e-06 9.44e-06 1.29e-06 4.6e-06 2.35e-06 4.22e-06 1.01e-05 1.8e-06 7.7e-06 4.8e-06 1.05e-05 4.93e-06 1.31e-05 3.88e-06 2.24e-06 6.09e-06 3.97e-06 6.33e-06 2.58e-06 2.77e-06 4.67e-06 8.11e-06 6.98e-06 3.2e-06 1.29e-05 3.22e-06 4.55e-06 3.42e-06 9.05e-06 8.06e-06 4.77e-06 8.78e-07 1.25e-06 3e-06 3.81e-06 2.28e-06 1.73e-06 1.84e-06 1.84e-06 9.71e-07 1.04e-06 1.08e-05 1.23e-06 1.58e-07 8.14e-07 1.61e-06 1.3e-06 8.03e-07 4.36e-07
ENSG00000240563 L1TD1 183055 2.69e-06 2.44e-06 3.09e-07 1.7e-06 4.76e-07 8.24e-07 1.65e-06 6.28e-07 1.82e-06 9.02e-07 2.43e-06 1.3e-06 3.51e-06 1.42e-06 8.08e-07 1.49e-06 1.12e-06 1.97e-06 7.85e-07 1.15e-06 9.48e-07 2.76e-06 2.13e-06 1.03e-06 3.4e-06 1.23e-06 1.27e-06 1.64e-06 1.91e-06 1.85e-06 1.45e-06 2.7e-07 5.18e-07 1.26e-06 1.27e-06 8.66e-07 8.6e-07 4.24e-07 9.58e-07 3.74e-07 1.52e-07 3.17e-06 4.36e-07 1.99e-07 3.6e-07 3.15e-07 6.93e-07 2.42e-07 2.46e-07