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Genes within 1Mb (chr1:62377006:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -990569 sc-eQTL 2.18e-01 -0.1 0.0813 0.536 B L1
ENSG00000116641 DOCK7 -311380 sc-eQTL 7.98e-01 0.0209 0.0816 0.536 B L1
ENSG00000125703 ATG4C -407126 sc-eQTL 4.28e-01 0.045 0.0566 0.536 B L1
ENSG00000132849 PATJ 634600 sc-eQTL 5.08e-02 0.134 0.0682 0.536 B L1
ENSG00000162604 TM2D1 651583 sc-eQTL 5.10e-01 -0.0454 0.0687 0.536 B L1
ENSG00000162607 USP1 -59291 sc-eQTL 4.90e-01 0.0541 0.0782 0.536 B L1
ENSG00000088035 ALG6 -990569 sc-eQTL 3.69e-01 -0.0671 0.0745 0.536 CD4T L1
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.65e-01 -0.0685 0.0754 0.536 CD4T L1
ENSG00000125703 ATG4C -407126 sc-eQTL 3.91e-01 0.0524 0.0609 0.536 CD4T L1
ENSG00000132849 PATJ 634600 sc-eQTL 1.84e-02 0.116 0.0489 0.536 CD4T L1
ENSG00000162604 TM2D1 651583 sc-eQTL 5.28e-01 0.038 0.0601 0.536 CD4T L1
ENSG00000162607 USP1 -59291 sc-eQTL 8.37e-01 0.0122 0.0592 0.536 CD4T L1
ENSG00000088035 ALG6 -990569 sc-eQTL 9.89e-01 -0.00117 0.0832 0.536 CD8T L1
ENSG00000116641 DOCK7 -311380 sc-eQTL 7.92e-01 0.0223 0.0842 0.536 CD8T L1
ENSG00000125703 ATG4C -407126 sc-eQTL 5.78e-01 0.0445 0.08 0.536 CD8T L1
ENSG00000132849 PATJ 634600 sc-eQTL 4.41e-01 0.0376 0.0487 0.536 CD8T L1
ENSG00000162604 TM2D1 651583 sc-eQTL 7.15e-01 -0.0268 0.0732 0.536 CD8T L1
ENSG00000162607 USP1 -59291 sc-eQTL 3.52e-01 -0.065 0.0696 0.536 CD8T L1
ENSG00000088035 ALG6 -990569 sc-eQTL 2.06e-01 -0.109 0.0856 0.529 DC L1
ENSG00000116641 DOCK7 -311380 sc-eQTL 7.02e-01 -0.0338 0.0881 0.529 DC L1
ENSG00000125703 ATG4C -407126 sc-eQTL 5.55e-01 -0.0408 0.0689 0.529 DC L1
ENSG00000162604 TM2D1 651583 sc-eQTL 1.26e-01 0.123 0.0799 0.529 DC L1
ENSG00000162607 USP1 -59291 sc-eQTL 9.37e-01 -0.00665 0.0842 0.529 DC L1
ENSG00000088035 ALG6 -990569 sc-eQTL 6.14e-01 -0.0432 0.0854 0.536 Mono L1
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.51e-02 -0.173 0.0818 0.536 Mono L1
ENSG00000125703 ATG4C -407126 sc-eQTL 2.18e-01 0.0689 0.0557 0.536 Mono L1
ENSG00000162604 TM2D1 651583 sc-eQTL 2.73e-01 0.068 0.0618 0.536 Mono L1
ENSG00000162607 USP1 -59291 sc-eQTL 1.96e-01 0.0936 0.0722 0.536 Mono L1
ENSG00000240563 L1TD1 182157 sc-eQTL 5.25e-01 -0.043 0.0676 0.536 Mono L1
ENSG00000088035 ALG6 -990569 sc-eQTL 9.51e-02 -0.137 0.0815 0.536 NK L1
ENSG00000116641 DOCK7 -311380 sc-eQTL 2.53e-01 0.0772 0.0674 0.536 NK L1
ENSG00000125703 ATG4C -407126 sc-eQTL 7.12e-01 -0.0268 0.0725 0.536 NK L1
ENSG00000132849 PATJ 634600 sc-eQTL 9.12e-01 -0.0079 0.0711 0.536 NK L1
ENSG00000162604 TM2D1 651583 sc-eQTL 5.31e-01 -0.0456 0.0728 0.536 NK L1
ENSG00000162607 USP1 -59291 sc-eQTL 9.63e-01 -0.00374 0.0806 0.536 NK L1
ENSG00000088035 ALG6 -990569 sc-eQTL 6.83e-01 -0.0323 0.0788 0.536 Other_T L1
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.05e-01 0.0825 0.0803 0.536 Other_T L1
ENSG00000125703 ATG4C -407126 sc-eQTL 8.53e-01 0.0129 0.0697 0.536 Other_T L1
ENSG00000132849 PATJ 634600 sc-eQTL 4.21e-01 -0.0522 0.0648 0.536 Other_T L1
ENSG00000162604 TM2D1 651583 sc-eQTL 8.87e-01 -0.0108 0.0761 0.536 Other_T L1
ENSG00000162607 USP1 -59291 sc-eQTL 3.51e-01 0.05 0.0534 0.536 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -990569 sc-eQTL 1.35e-01 0.149 0.0993 0.541 B_Activated L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 1.82e-02 -0.218 0.0916 0.541 B_Activated L2
ENSG00000125703 ATG4C -407126 sc-eQTL 8.78e-01 -0.0151 0.0979 0.541 B_Activated L2
ENSG00000132849 PATJ 634600 sc-eQTL 9.39e-01 -0.00635 0.0832 0.541 B_Activated L2
ENSG00000162604 TM2D1 651583 sc-eQTL 5.54e-02 -0.202 0.105 0.541 B_Activated L2
ENSG00000162607 USP1 -59291 sc-eQTL 7.35e-01 -0.0351 0.104 0.541 B_Activated L2
ENSG00000088035 ALG6 -990569 sc-eQTL 9.69e-01 0.00364 0.095 0.539 B_Intermediate L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 8.68e-01 0.0151 0.0907 0.539 B_Intermediate L2
ENSG00000125703 ATG4C -407126 sc-eQTL 7.33e-01 -0.0262 0.0768 0.539 B_Intermediate L2
ENSG00000132849 PATJ 634600 sc-eQTL 1.55e-02 0.2 0.082 0.539 B_Intermediate L2
ENSG00000162604 TM2D1 651583 sc-eQTL 5.93e-01 0.0467 0.0872 0.539 B_Intermediate L2
ENSG00000162607 USP1 -59291 sc-eQTL 8.36e-01 -0.0189 0.0913 0.539 B_Intermediate L2
ENSG00000088035 ALG6 -990569 sc-eQTL 1.61e-01 -0.131 0.0929 0.534 B_Memory L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.55e-01 -0.0809 0.0874 0.534 B_Memory L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.77e-01 -0.0736 0.083 0.534 B_Memory L2
ENSG00000132849 PATJ 634600 sc-eQTL 2.57e-01 0.0941 0.0828 0.534 B_Memory L2
ENSG00000162604 TM2D1 651583 sc-eQTL 9.65e-01 0.00408 0.0934 0.534 B_Memory L2
ENSG00000162607 USP1 -59291 sc-eQTL 1.29e-01 0.146 0.0955 0.534 B_Memory L2
ENSG00000088035 ALG6 -990569 sc-eQTL 4.73e-01 -0.0675 0.094 0.536 B_Naive1 L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 8.60e-01 -0.0159 0.0901 0.536 B_Naive1 L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.45e-01 0.0656 0.0693 0.536 B_Naive1 L2
ENSG00000132849 PATJ 634600 sc-eQTL 5.81e-01 0.0493 0.0891 0.536 B_Naive1 L2
ENSG00000162604 TM2D1 651583 sc-eQTL 4.04e-01 0.0686 0.0819 0.536 B_Naive1 L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.10e-01 -0.0822 0.0808 0.536 B_Naive1 L2
ENSG00000088035 ALG6 -990569 sc-eQTL 1.82e-01 -0.127 0.0949 0.534 B_Naive2 L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 4.99e-01 0.0619 0.0916 0.534 B_Naive2 L2
ENSG00000125703 ATG4C -407126 sc-eQTL 4.92e-01 0.0607 0.0881 0.534 B_Naive2 L2
ENSG00000132849 PATJ 634600 sc-eQTL 5.22e-01 0.0578 0.0902 0.534 B_Naive2 L2
ENSG00000162604 TM2D1 651583 sc-eQTL 7.13e-02 -0.164 0.0907 0.534 B_Naive2 L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.66e-01 0.0823 0.0909 0.534 B_Naive2 L2
ENSG00000088035 ALG6 -990569 sc-eQTL 4.48e-01 -0.0752 0.0988 0.534 CD4_CTL L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.92e-01 0.0741 0.0864 0.534 CD4_CTL L2
ENSG00000125703 ATG4C -407126 sc-eQTL 8.07e-01 0.0219 0.0895 0.534 CD4_CTL L2
ENSG00000132849 PATJ 634600 sc-eQTL 6.22e-01 -0.0354 0.0717 0.534 CD4_CTL L2
ENSG00000162604 TM2D1 651583 sc-eQTL 4.91e-01 0.0632 0.0916 0.534 CD4_CTL L2
ENSG00000162607 USP1 -59291 sc-eQTL 4.65e-01 0.0667 0.091 0.534 CD4_CTL L2
ENSG00000088035 ALG6 -990569 sc-eQTL 6.94e-01 0.0325 0.0825 0.536 CD4_Naive L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 1.07e-01 -0.131 0.0806 0.536 CD4_Naive L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.60e-01 0.0656 0.0715 0.536 CD4_Naive L2
ENSG00000132849 PATJ 634600 sc-eQTL 1.12e-01 0.0799 0.05 0.536 CD4_Naive L2
ENSG00000162604 TM2D1 651583 sc-eQTL 2.92e-01 0.0762 0.0722 0.536 CD4_Naive L2
ENSG00000162607 USP1 -59291 sc-eQTL 7.43e-01 -0.0219 0.0669 0.536 CD4_Naive L2
ENSG00000088035 ALG6 -990569 sc-eQTL 3.59e-02 -0.191 0.0906 0.536 CD4_TCM L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 6.70e-01 -0.0345 0.0811 0.536 CD4_TCM L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.84e-01 0.0687 0.0788 0.536 CD4_TCM L2
ENSG00000132849 PATJ 634600 sc-eQTL 1.34e-01 0.0948 0.063 0.536 CD4_TCM L2
ENSG00000162604 TM2D1 651583 sc-eQTL 3.10e-01 -0.075 0.0737 0.536 CD4_TCM L2
ENSG00000162607 USP1 -59291 sc-eQTL 7.40e-01 0.0254 0.0763 0.536 CD4_TCM L2
ENSG00000088035 ALG6 -990569 sc-eQTL 2.19e-01 -0.116 0.0941 0.536 CD4_TEM L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 6.32e-01 -0.0442 0.092 0.536 CD4_TEM L2
ENSG00000125703 ATG4C -407126 sc-eQTL 6.19e-01 0.0445 0.0893 0.536 CD4_TEM L2
ENSG00000132849 PATJ 634600 sc-eQTL 3.01e-02 0.18 0.0824 0.536 CD4_TEM L2
ENSG00000162604 TM2D1 651583 sc-eQTL 8.80e-01 0.0132 0.0877 0.536 CD4_TEM L2
ENSG00000162607 USP1 -59291 sc-eQTL 7.55e-01 0.0273 0.0874 0.536 CD4_TEM L2
ENSG00000088035 ALG6 -990569 sc-eQTL 5.72e-01 0.051 0.0901 0.536 CD8_CTL L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 9.16e-02 0.144 0.085 0.536 CD8_CTL L2
ENSG00000125703 ATG4C -407126 sc-eQTL 5.00e-01 0.0615 0.091 0.536 CD8_CTL L2
ENSG00000132849 PATJ 634600 sc-eQTL 5.57e-01 0.0507 0.0862 0.536 CD8_CTL L2
ENSG00000162604 TM2D1 651583 sc-eQTL 7.97e-01 -0.0204 0.0791 0.536 CD8_CTL L2
ENSG00000162607 USP1 -59291 sc-eQTL 9.51e-01 -0.00518 0.0848 0.536 CD8_CTL L2
ENSG00000088035 ALG6 -990569 sc-eQTL 4.29e-01 -0.071 0.0896 0.536 CD8_Naive L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.12e-02 -0.199 0.0918 0.536 CD8_Naive L2
ENSG00000125703 ATG4C -407126 sc-eQTL 2.23e-01 0.109 0.0888 0.536 CD8_Naive L2
ENSG00000132849 PATJ 634600 sc-eQTL 5.15e-01 0.0444 0.068 0.536 CD8_Naive L2
ENSG00000162604 TM2D1 651583 sc-eQTL 7.87e-01 0.0225 0.0832 0.536 CD8_Naive L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.30e-01 -0.0742 0.0761 0.536 CD8_Naive L2
ENSG00000088035 ALG6 -990569 sc-eQTL 6.06e-01 0.0495 0.0956 0.521 CD8_TCM L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 5.01e-01 0.0629 0.0932 0.521 CD8_TCM L2
ENSG00000125703 ATG4C -407126 sc-eQTL 7.12e-01 -0.0354 0.0954 0.521 CD8_TCM L2
ENSG00000132849 PATJ 634600 sc-eQTL 7.30e-01 0.0303 0.0878 0.521 CD8_TCM L2
ENSG00000162604 TM2D1 651583 sc-eQTL 3.98e-01 -0.0756 0.0892 0.521 CD8_TCM L2
ENSG00000162607 USP1 -59291 sc-eQTL 8.43e-01 0.0177 0.0893 0.521 CD8_TCM L2
ENSG00000088035 ALG6 -990569 sc-eQTL 2.65e-01 0.109 0.0975 0.546 CD8_TEM L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 2.55e-01 0.108 0.0945 0.546 CD8_TEM L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.62e-01 -0.0832 0.091 0.546 CD8_TEM L2
ENSG00000132849 PATJ 634600 sc-eQTL 8.77e-01 0.0143 0.0923 0.546 CD8_TEM L2
ENSG00000162604 TM2D1 651583 sc-eQTL 5.33e-01 0.0586 0.0939 0.546 CD8_TEM L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.12e-01 -0.0953 0.0939 0.546 CD8_TEM L2
ENSG00000088035 ALG6 -990569 sc-eQTL 1.29e-01 -0.135 0.0885 0.535 MAIT L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.97e-01 -0.0723 0.0851 0.535 MAIT L2
ENSG00000125703 ATG4C -407126 sc-eQTL 5.13e-01 0.0588 0.0898 0.535 MAIT L2
ENSG00000132849 PATJ 634600 sc-eQTL 6.06e-01 -0.0393 0.076 0.535 MAIT L2
ENSG00000162604 TM2D1 651583 sc-eQTL 2.71e-01 0.0951 0.0862 0.535 MAIT L2
ENSG00000162607 USP1 -59291 sc-eQTL 2.79e-01 0.0967 0.0891 0.535 MAIT L2
ENSG00000088035 ALG6 -990569 sc-eQTL 5.83e-01 0.052 0.0944 0.54 NK_CD56bright L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 5.32e-01 0.0512 0.0818 0.54 NK_CD56bright L2
ENSG00000125703 ATG4C -407126 sc-eQTL 7.80e-01 -0.0255 0.0914 0.54 NK_CD56bright L2
ENSG00000132849 PATJ 634600 sc-eQTL 8.40e-01 0.0181 0.0896 0.54 NK_CD56bright L2
ENSG00000162604 TM2D1 651583 sc-eQTL 7.48e-01 -0.0293 0.0912 0.54 NK_CD56bright L2
ENSG00000162607 USP1 -59291 sc-eQTL 6.90e-01 0.0392 0.0982 0.54 NK_CD56bright L2
ENSG00000088035 ALG6 -990569 sc-eQTL 2.99e-03 -0.272 0.0906 0.534 NK_CD56dim L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 7.59e-01 0.0248 0.0805 0.534 NK_CD56dim L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.04e-01 -0.0841 0.0816 0.534 NK_CD56dim L2
ENSG00000132849 PATJ 634600 sc-eQTL 9.19e-01 0.00898 0.0887 0.534 NK_CD56dim L2
ENSG00000162604 TM2D1 651583 sc-eQTL 5.78e-01 -0.0468 0.0841 0.534 NK_CD56dim L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.73e-01 -0.0805 0.0901 0.534 NK_CD56dim L2
ENSG00000088035 ALG6 -990569 sc-eQTL 5.55e-01 0.0601 0.102 0.543 NK_HLA L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.84e-02 0.161 0.077 0.543 NK_HLA L2
ENSG00000125703 ATG4C -407126 sc-eQTL 5.97e-01 0.048 0.0905 0.543 NK_HLA L2
ENSG00000132849 PATJ 634600 sc-eQTL 4.21e-01 -0.0676 0.0839 0.543 NK_HLA L2
ENSG00000162604 TM2D1 651583 sc-eQTL 1.54e-01 0.136 0.095 0.543 NK_HLA L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.71e-01 0.0891 0.0993 0.543 NK_HLA L2
ENSG00000088035 ALG6 -990569 sc-eQTL 9.81e-01 -0.00217 0.0892 0.534 NK_cytokine L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 9.72e-01 0.00291 0.0826 0.534 NK_cytokine L2
ENSG00000125703 ATG4C -407126 sc-eQTL 4.80e-01 0.0597 0.0844 0.534 NK_cytokine L2
ENSG00000132849 PATJ 634600 sc-eQTL 7.73e-01 -0.0258 0.0891 0.534 NK_cytokine L2
ENSG00000162604 TM2D1 651583 sc-eQTL 6.03e-01 0.0454 0.0871 0.534 NK_cytokine L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.05e-01 0.0944 0.0918 0.534 NK_cytokine L2
ENSG00000088035 ALG6 -990569 sc-eQTL 2.42e-01 0.146 0.124 0.515 PB L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 5.15e-01 0.0866 0.133 0.515 PB L2
ENSG00000125703 ATG4C -407126 sc-eQTL 4.93e-01 0.0796 0.116 0.515 PB L2
ENSG00000132849 PATJ 634600 sc-eQTL 2.35e-01 0.143 0.12 0.515 PB L2
ENSG00000162604 TM2D1 651583 sc-eQTL 1.14e-01 -0.184 0.116 0.515 PB L2
ENSG00000162607 USP1 -59291 sc-eQTL 1.07e-02 0.291 0.112 0.515 PB L2
ENSG00000088035 ALG6 -990569 sc-eQTL 3.92e-01 -0.0763 0.0889 0.537 Pro_T L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 9.67e-01 -0.00373 0.0893 0.537 Pro_T L2
ENSG00000125703 ATG4C -407126 sc-eQTL 6.49e-01 -0.0357 0.0782 0.537 Pro_T L2
ENSG00000132849 PATJ 634600 sc-eQTL 8.49e-01 -0.0163 0.0853 0.537 Pro_T L2
ENSG00000162604 TM2D1 651583 sc-eQTL 9.55e-02 -0.159 0.0949 0.537 Pro_T L2
ENSG00000162607 USP1 -59291 sc-eQTL 4.96e-01 -0.0367 0.0539 0.537 Pro_T L2
ENSG00000088035 ALG6 -990569 sc-eQTL 7.82e-01 -0.0266 0.0961 0.536 Treg L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 2.46e-01 0.102 0.088 0.536 Treg L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.24e-01 -0.089 0.09 0.536 Treg L2
ENSG00000132849 PATJ 634600 sc-eQTL 3.44e-01 -0.0791 0.0834 0.536 Treg L2
ENSG00000162604 TM2D1 651583 sc-eQTL 2.25e-01 0.112 0.0917 0.536 Treg L2
ENSG00000162607 USP1 -59291 sc-eQTL 6.99e-01 -0.0354 0.0912 0.536 Treg L2
ENSG00000088035 ALG6 -990569 sc-eQTL 8.59e-01 -0.0159 0.0897 0.537 cDC L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 5.86e-01 0.048 0.0879 0.537 cDC L2
ENSG00000125703 ATG4C -407126 sc-eQTL 9.32e-01 -0.00648 0.0764 0.537 cDC L2
ENSG00000162604 TM2D1 651583 sc-eQTL 3.63e-01 0.0868 0.0953 0.537 cDC L2
ENSG00000162607 USP1 -59291 sc-eQTL 7.73e-01 -0.0249 0.0862 0.537 cDC L2
ENSG00000088035 ALG6 -990569 sc-eQTL 6.07e-01 -0.0442 0.0856 0.536 cMono_IL1B L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 2.46e-02 -0.202 0.0893 0.536 cMono_IL1B L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.99e-01 0.0537 0.0634 0.536 cMono_IL1B L2
ENSG00000162604 TM2D1 651583 sc-eQTL 5.37e-01 0.0405 0.0655 0.536 cMono_IL1B L2
ENSG00000162607 USP1 -59291 sc-eQTL 6.33e-01 -0.0379 0.0794 0.536 cMono_IL1B L2
ENSG00000240563 L1TD1 182157 sc-eQTL 4.86e-01 -0.0556 0.0797 0.536 cMono_IL1B L2
ENSG00000088035 ALG6 -990569 sc-eQTL 9.82e-01 -0.00212 0.0957 0.536 cMono_S100A L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 1.17e-01 -0.139 0.0882 0.536 cMono_S100A L2
ENSG00000125703 ATG4C -407126 sc-eQTL 1.39e-01 0.113 0.0764 0.536 cMono_S100A L2
ENSG00000162604 TM2D1 651583 sc-eQTL 3.44e-01 0.0742 0.0782 0.536 cMono_S100A L2
ENSG00000162607 USP1 -59291 sc-eQTL 2.57e-01 0.101 0.0889 0.536 cMono_S100A L2
ENSG00000240563 L1TD1 182157 sc-eQTL 9.00e-02 0.125 0.0737 0.536 cMono_S100A L2
ENSG00000088035 ALG6 -990569 sc-eQTL 4.29e-01 -0.0888 0.112 0.542 gdT L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 6.73e-01 0.0466 0.11 0.542 gdT L2
ENSG00000125703 ATG4C -407126 sc-eQTL 2.66e-01 -0.117 0.105 0.542 gdT L2
ENSG00000132849 PATJ 634600 sc-eQTL 6.13e-01 -0.0521 0.103 0.542 gdT L2
ENSG00000162604 TM2D1 651583 sc-eQTL 6.85e-01 0.044 0.108 0.542 gdT L2
ENSG00000162607 USP1 -59291 sc-eQTL 5.88e-01 0.0574 0.106 0.542 gdT L2
ENSG00000088035 ALG6 -990569 sc-eQTL 6.93e-01 -0.0355 0.0898 0.54 intMono L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 4.78e-01 0.0651 0.0917 0.54 intMono L2
ENSG00000125703 ATG4C -407126 sc-eQTL 8.67e-01 -0.0146 0.0876 0.54 intMono L2
ENSG00000162604 TM2D1 651583 sc-eQTL 5.24e-01 0.0591 0.0927 0.54 intMono L2
ENSG00000162607 USP1 -59291 sc-eQTL 3.76e-01 0.087 0.098 0.54 intMono L2
ENSG00000240563 L1TD1 182157 sc-eQTL 6.99e-01 -0.0279 0.0722 0.54 intMono L2
ENSG00000088035 ALG6 -990569 sc-eQTL 6.70e-01 0.0406 0.095 0.545 ncMono L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 6.36e-01 -0.0443 0.0935 0.545 ncMono L2
ENSG00000125703 ATG4C -407126 sc-eQTL 2.95e-01 -0.0915 0.0871 0.545 ncMono L2
ENSG00000162604 TM2D1 651583 sc-eQTL 6.20e-01 0.0468 0.0942 0.545 ncMono L2
ENSG00000162607 USP1 -59291 sc-eQTL 5.14e-01 -0.0609 0.0933 0.545 ncMono L2
ENSG00000240563 L1TD1 182157 sc-eQTL 2.71e-01 -0.0728 0.066 0.545 ncMono L2
ENSG00000088035 ALG6 -990569 sc-eQTL 1.96e-02 -0.228 0.0967 0.542 pDC L2
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.20e-01 -0.1 0.1 0.542 pDC L2
ENSG00000125703 ATG4C -407126 sc-eQTL 3.09e-01 -0.0918 0.0899 0.542 pDC L2
ENSG00000162604 TM2D1 651583 sc-eQTL 2.53e-01 0.101 0.088 0.542 pDC L2
ENSG00000162607 USP1 -59291 sc-eQTL 9.17e-01 -0.0107 0.103 0.542 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -990569 sc-eQTL 2.06e-01 -0.122 0.096 0.536 B_Memory LOneK1K
ENSG00000116641 DOCK7 -311380 sc-eQTL 8.56e-01 -0.0152 0.0837 0.536 B_Memory LOneK1K
ENSG00000125703 ATG4C -407126 sc-eQTL 5.65e-01 -0.0389 0.0676 0.536 B_Memory LOneK1K
ENSG00000132849 PATJ 634600 sc-eQTL 6.62e-03 0.202 0.0736 0.536 B_Memory LOneK1K
ENSG00000162604 TM2D1 651583 sc-eQTL 6.61e-01 0.0373 0.085 0.536 B_Memory LOneK1K
ENSG00000162607 USP1 -59291 sc-eQTL 1.66e-01 0.12 0.0859 0.536 B_Memory LOneK1K
ENSG00000088035 ALG6 -990569 sc-eQTL 1.58e-01 -0.132 0.0932 0.536 B_Naive LOneK1K
ENSG00000116641 DOCK7 -311380 sc-eQTL 7.01e-01 0.0336 0.0874 0.536 B_Naive LOneK1K
ENSG00000125703 ATG4C -407126 sc-eQTL 9.19e-02 0.112 0.0663 0.536 B_Naive LOneK1K
ENSG00000132849 PATJ 634600 sc-eQTL 4.43e-01 0.0613 0.0797 0.536 B_Naive LOneK1K
ENSG00000162604 TM2D1 651583 sc-eQTL 9.02e-01 -0.00938 0.0762 0.536 B_Naive LOneK1K
ENSG00000162607 USP1 -59291 sc-eQTL 9.70e-01 0.00304 0.081 0.536 B_Naive LOneK1K
ENSG00000088035 ALG6 -990569 sc-eQTL 6.32e-01 -0.0406 0.0846 0.536 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -311380 sc-eQTL 3.85e-02 -0.176 0.0844 0.536 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -407126 sc-eQTL 6.23e-02 0.11 0.0585 0.536 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 651583 sc-eQTL 3.36e-01 0.0591 0.0613 0.536 CD14_Mono LOneK1K
ENSG00000162607 USP1 -59291 sc-eQTL 8.01e-01 0.0188 0.0745 0.536 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 182157 sc-eQTL 8.25e-01 0.0179 0.0808 0.536 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -990569 sc-eQTL 7.52e-01 -0.0301 0.095 0.539 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -311380 sc-eQTL 4.88e-01 -0.0652 0.0939 0.539 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -407126 sc-eQTL 1.79e-01 -0.108 0.0798 0.539 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 651583 sc-eQTL 4.95e-01 0.064 0.0936 0.539 CD16_Mono LOneK1K
ENSG00000162607 USP1 -59291 sc-eQTL 9.75e-01 0.00277 0.0874 0.539 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 182157 sc-eQTL 2.92e-01 -0.0628 0.0595 0.539 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -990569 sc-eQTL 3.06e-02 -0.183 0.0839 0.534 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -311380 sc-eQTL 4.80e-01 0.0538 0.0759 0.534 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -407126 sc-eQTL 5.93e-01 -0.0406 0.0759 0.534 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 634600 sc-eQTL 7.15e-01 -0.03 0.0818 0.534 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 651583 sc-eQTL 6.46e-01 -0.0345 0.0749 0.534 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -59291 sc-eQTL 8.57e-01 0.0148 0.0817 0.534 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -311362 eQTL 0.022 -0.0548 0.0239 0.0118 0.00143 0.474
ENSG00000240563 L1TD1 182157 eQTL 0.0047 -0.118 0.0415 0.0 0.0 0.474

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000240563 L1TD1 182157 1.97e-06 2.44e-06 2.71e-07 1.76e-06 4.46e-07 8.1e-07 1.32e-06 3.9e-07 1.7e-06 7.58e-07 1.93e-06 1.43e-06 3.24e-06 9.33e-07 4.4e-07 1.06e-06 9.51e-07 1.34e-06 5.7e-07 7.96e-07 6.19e-07 1.92e-06 1.87e-06 1.01e-06 2.62e-06 1.05e-06 1.11e-06 1.12e-06 1.72e-06 1.65e-06 1.07e-06 2.83e-07 3.98e-07 8e-07 9.21e-07 5.99e-07 7.35e-07 3.52e-07 8.73e-07 2.23e-07 3.04e-07 2.89e-06 4.24e-07 1.74e-07 3.71e-07 3.19e-07 4.02e-07 2.41e-07 2.83e-07