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Genes within 1Mb (chr1:62374432:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -993143 sc-eQTL 3.77e-01 -0.0704 0.0795 0.4 B L1
ENSG00000116641 DOCK7 -313954 sc-eQTL 5.43e-01 -0.0484 0.0796 0.4 B L1
ENSG00000125703 ATG4C -409700 sc-eQTL 3.47e-01 0.052 0.0552 0.4 B L1
ENSG00000132849 PATJ 632026 sc-eQTL 7.43e-02 0.12 0.0667 0.4 B L1
ENSG00000162604 TM2D1 649009 sc-eQTL 2.14e-01 -0.0832 0.0669 0.4 B L1
ENSG00000162607 USP1 -61865 sc-eQTL 1.92e-01 -0.0998 0.0762 0.4 B L1
ENSG00000088035 ALG6 -993143 sc-eQTL 5.97e-01 -0.0392 0.0741 0.4 CD4T L1
ENSG00000116641 DOCK7 -313954 sc-eQTL 4.06e-01 -0.0624 0.0749 0.4 CD4T L1
ENSG00000125703 ATG4C -409700 sc-eQTL 4.50e-01 0.0458 0.0605 0.4 CD4T L1
ENSG00000132849 PATJ 632026 sc-eQTL 9.22e-01 0.00484 0.0492 0.4 CD4T L1
ENSG00000162604 TM2D1 649009 sc-eQTL 2.24e-01 0.0726 0.0596 0.4 CD4T L1
ENSG00000162607 USP1 -61865 sc-eQTL 9.68e-01 0.00236 0.0588 0.4 CD4T L1
ENSG00000088035 ALG6 -993143 sc-eQTL 8.46e-01 0.0157 0.0808 0.4 CD8T L1
ENSG00000116641 DOCK7 -313954 sc-eQTL 9.20e-01 -0.00826 0.0819 0.4 CD8T L1
ENSG00000125703 ATG4C -409700 sc-eQTL 2.04e-01 0.0987 0.0775 0.4 CD8T L1
ENSG00000132849 PATJ 632026 sc-eQTL 8.36e-01 0.00984 0.0474 0.4 CD8T L1
ENSG00000162604 TM2D1 649009 sc-eQTL 5.81e-02 -0.134 0.0706 0.4 CD8T L1
ENSG00000162607 USP1 -61865 sc-eQTL 2.07e-01 -0.0853 0.0675 0.4 CD8T L1
ENSG00000088035 ALG6 -993143 sc-eQTL 4.74e-01 -0.0604 0.0842 0.403 DC L1
ENSG00000116641 DOCK7 -313954 sc-eQTL 2.97e-01 0.09 0.0862 0.403 DC L1
ENSG00000125703 ATG4C -409700 sc-eQTL 7.24e-01 0.0239 0.0676 0.403 DC L1
ENSG00000162604 TM2D1 649009 sc-eQTL 3.80e-01 0.0692 0.0786 0.403 DC L1
ENSG00000162607 USP1 -61865 sc-eQTL 7.90e-01 -0.022 0.0825 0.403 DC L1
ENSG00000088035 ALG6 -993143 sc-eQTL 4.58e-01 -0.0637 0.0856 0.4 Mono L1
ENSG00000116641 DOCK7 -313954 sc-eQTL 4.04e-01 -0.0693 0.0828 0.4 Mono L1
ENSG00000125703 ATG4C -409700 sc-eQTL 6.04e-01 0.0291 0.056 0.4 Mono L1
ENSG00000162604 TM2D1 649009 sc-eQTL 5.31e-01 -0.039 0.0622 0.4 Mono L1
ENSG00000162607 USP1 -61865 sc-eQTL 9.93e-01 0.000608 0.0728 0.4 Mono L1
ENSG00000240563 L1TD1 179583 sc-eQTL 5.54e-01 -0.0402 0.0678 0.4 Mono L1
ENSG00000088035 ALG6 -993143 sc-eQTL 1.67e-01 -0.11 0.0794 0.401 NK L1
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.06e-01 0.0672 0.0655 0.401 NK L1
ENSG00000125703 ATG4C -409700 sc-eQTL 8.57e-01 -0.0127 0.0705 0.401 NK L1
ENSG00000132849 PATJ 632026 sc-eQTL 4.85e-01 -0.0483 0.069 0.401 NK L1
ENSG00000162604 TM2D1 649009 sc-eQTL 9.41e-01 0.00523 0.0708 0.401 NK L1
ENSG00000162607 USP1 -61865 sc-eQTL 6.04e-01 -0.0406 0.0783 0.401 NK L1
ENSG00000088035 ALG6 -993143 sc-eQTL 7.59e-01 -0.0238 0.0776 0.4 Other_T L1
ENSG00000116641 DOCK7 -313954 sc-eQTL 8.43e-01 -0.0157 0.0793 0.4 Other_T L1
ENSG00000125703 ATG4C -409700 sc-eQTL 7.77e-01 -0.0195 0.0686 0.4 Other_T L1
ENSG00000132849 PATJ 632026 sc-eQTL 1.40e-01 -0.0943 0.0636 0.4 Other_T L1
ENSG00000162604 TM2D1 649009 sc-eQTL 9.97e-01 0.000235 0.075 0.4 Other_T L1
ENSG00000162607 USP1 -61865 sc-eQTL 8.75e-01 -0.00833 0.0528 0.4 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -993143 sc-eQTL 9.73e-01 0.0034 0.0994 0.398 B_Activated L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 6.80e-01 -0.0382 0.0925 0.398 B_Activated L2
ENSG00000125703 ATG4C -409700 sc-eQTL 2.42e-01 0.114 0.0969 0.398 B_Activated L2
ENSG00000132849 PATJ 632026 sc-eQTL 5.81e-01 0.0457 0.0827 0.398 B_Activated L2
ENSG00000162604 TM2D1 649009 sc-eQTL 6.95e-01 -0.0412 0.105 0.398 B_Activated L2
ENSG00000162607 USP1 -61865 sc-eQTL 2.88e-01 0.11 0.103 0.398 B_Activated L2
ENSG00000088035 ALG6 -993143 sc-eQTL 4.83e-01 0.065 0.0923 0.401 B_Intermediate L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 8.90e-01 0.0122 0.0883 0.401 B_Intermediate L2
ENSG00000125703 ATG4C -409700 sc-eQTL 1.81e-01 -0.0999 0.0744 0.401 B_Intermediate L2
ENSG00000132849 PATJ 632026 sc-eQTL 8.75e-01 0.0128 0.081 0.401 B_Intermediate L2
ENSG00000162604 TM2D1 649009 sc-eQTL 9.72e-01 -0.00294 0.0849 0.401 B_Intermediate L2
ENSG00000162607 USP1 -61865 sc-eQTL 9.49e-01 -0.00571 0.0889 0.401 B_Intermediate L2
ENSG00000088035 ALG6 -993143 sc-eQTL 7.02e-01 0.0355 0.0926 0.399 B_Memory L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 8.64e-01 -0.0148 0.0869 0.399 B_Memory L2
ENSG00000125703 ATG4C -409700 sc-eQTL 7.61e-01 0.0252 0.0826 0.399 B_Memory L2
ENSG00000132849 PATJ 632026 sc-eQTL 1.80e-02 0.194 0.0813 0.399 B_Memory L2
ENSG00000162604 TM2D1 649009 sc-eQTL 9.64e-01 0.00423 0.0927 0.399 B_Memory L2
ENSG00000162607 USP1 -61865 sc-eQTL 8.86e-01 0.0137 0.0953 0.399 B_Memory L2
ENSG00000088035 ALG6 -993143 sc-eQTL 4.72e-01 -0.0655 0.0909 0.4 B_Naive1 L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 5.27e-02 -0.168 0.0865 0.4 B_Naive1 L2
ENSG00000125703 ATG4C -409700 sc-eQTL 7.78e-01 -0.019 0.0672 0.4 B_Naive1 L2
ENSG00000132849 PATJ 632026 sc-eQTL 1.26e-01 0.132 0.0859 0.4 B_Naive1 L2
ENSG00000162604 TM2D1 649009 sc-eQTL 7.64e-01 -0.0239 0.0794 0.4 B_Naive1 L2
ENSG00000162607 USP1 -61865 sc-eQTL 1.87e-01 -0.103 0.0781 0.4 B_Naive1 L2
ENSG00000088035 ALG6 -993143 sc-eQTL 2.02e-01 -0.12 0.094 0.399 B_Naive2 L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 7.09e-01 -0.0338 0.0907 0.399 B_Naive2 L2
ENSG00000125703 ATG4C -409700 sc-eQTL 5.37e-01 0.054 0.0872 0.399 B_Naive2 L2
ENSG00000132849 PATJ 632026 sc-eQTL 5.54e-01 0.0529 0.0893 0.399 B_Naive2 L2
ENSG00000162604 TM2D1 649009 sc-eQTL 5.42e-02 -0.173 0.0896 0.399 B_Naive2 L2
ENSG00000162607 USP1 -61865 sc-eQTL 3.35e-01 -0.0869 0.0899 0.399 B_Naive2 L2
ENSG00000088035 ALG6 -993143 sc-eQTL 2.47e-01 -0.111 0.0953 0.398 CD4_CTL L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.90e-01 -0.0719 0.0834 0.398 CD4_CTL L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.88e-01 -0.0347 0.0864 0.398 CD4_CTL L2
ENSG00000132849 PATJ 632026 sc-eQTL 1.49e-01 -0.0998 0.0689 0.398 CD4_CTL L2
ENSG00000162604 TM2D1 649009 sc-eQTL 3.16e-01 -0.0888 0.0883 0.398 CD4_CTL L2
ENSG00000162607 USP1 -61865 sc-eQTL 8.26e-01 -0.0193 0.088 0.398 CD4_CTL L2
ENSG00000088035 ALG6 -993143 sc-eQTL 4.01e-01 0.0689 0.0819 0.4 CD4_Naive L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 1.70e-01 -0.111 0.0802 0.4 CD4_Naive L2
ENSG00000125703 ATG4C -409700 sc-eQTL 1.69e-01 0.0978 0.0709 0.4 CD4_Naive L2
ENSG00000132849 PATJ 632026 sc-eQTL 7.58e-01 0.0154 0.05 0.4 CD4_Naive L2
ENSG00000162604 TM2D1 649009 sc-eQTL 1.06e-01 0.116 0.0715 0.4 CD4_Naive L2
ENSG00000162607 USP1 -61865 sc-eQTL 9.31e-01 0.0058 0.0665 0.4 CD4_Naive L2
ENSG00000088035 ALG6 -993143 sc-eQTL 1.02e-02 -0.232 0.0897 0.4 CD4_TCM L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 9.66e-01 -0.00347 0.0807 0.4 CD4_TCM L2
ENSG00000125703 ATG4C -409700 sc-eQTL 3.73e-01 0.0701 0.0785 0.4 CD4_TCM L2
ENSG00000132849 PATJ 632026 sc-eQTL 7.80e-01 -0.0176 0.0631 0.4 CD4_TCM L2
ENSG00000162604 TM2D1 649009 sc-eQTL 5.18e-01 -0.0476 0.0735 0.4 CD4_TCM L2
ENSG00000162607 USP1 -61865 sc-eQTL 5.68e-01 -0.0434 0.0759 0.4 CD4_TCM L2
ENSG00000088035 ALG6 -993143 sc-eQTL 7.63e-02 -0.163 0.0918 0.4 CD4_TEM L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 9.84e-01 -0.00185 0.0901 0.4 CD4_TEM L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.74e-01 0.0369 0.0875 0.4 CD4_TEM L2
ENSG00000132849 PATJ 632026 sc-eQTL 9.62e-01 0.00394 0.0816 0.4 CD4_TEM L2
ENSG00000162604 TM2D1 649009 sc-eQTL 7.46e-01 -0.0279 0.0859 0.4 CD4_TEM L2
ENSG00000162607 USP1 -61865 sc-eQTL 9.03e-01 0.0105 0.0856 0.4 CD4_TEM L2
ENSG00000088035 ALG6 -993143 sc-eQTL 2.92e-01 0.0923 0.0873 0.4 CD8_CTL L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.72e-02 0.172 0.0822 0.4 CD8_CTL L2
ENSG00000125703 ATG4C -409700 sc-eQTL 8.89e-02 0.15 0.0878 0.4 CD8_CTL L2
ENSG00000132849 PATJ 632026 sc-eQTL 4.09e-01 0.0692 0.0836 0.4 CD8_CTL L2
ENSG00000162604 TM2D1 649009 sc-eQTL 1.01e-01 -0.126 0.0763 0.4 CD8_CTL L2
ENSG00000162607 USP1 -61865 sc-eQTL 6.43e-01 -0.0382 0.0823 0.4 CD8_CTL L2
ENSG00000088035 ALG6 -993143 sc-eQTL 5.21e-01 -0.0559 0.087 0.4 CD8_Naive L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 2.41e-02 -0.202 0.0889 0.4 CD8_Naive L2
ENSG00000125703 ATG4C -409700 sc-eQTL 4.20e-01 0.0697 0.0862 0.4 CD8_Naive L2
ENSG00000132849 PATJ 632026 sc-eQTL 6.08e-01 0.0339 0.066 0.4 CD8_Naive L2
ENSG00000162604 TM2D1 649009 sc-eQTL 3.90e-02 -0.166 0.0799 0.4 CD8_Naive L2
ENSG00000162607 USP1 -61865 sc-eQTL 2.47e-01 -0.0856 0.0737 0.4 CD8_Naive L2
ENSG00000088035 ALG6 -993143 sc-eQTL 3.61e-01 0.0845 0.0923 0.396 CD8_TCM L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 5.64e-01 0.0522 0.0902 0.396 CD8_TCM L2
ENSG00000125703 ATG4C -409700 sc-eQTL 3.00e-01 -0.0957 0.0921 0.396 CD8_TCM L2
ENSG00000132849 PATJ 632026 sc-eQTL 1.75e-01 0.115 0.0845 0.396 CD8_TCM L2
ENSG00000162604 TM2D1 649009 sc-eQTL 8.94e-01 -0.0115 0.0864 0.396 CD8_TCM L2
ENSG00000162607 USP1 -61865 sc-eQTL 9.44e-01 -0.00612 0.0863 0.396 CD8_TCM L2
ENSG00000088035 ALG6 -993143 sc-eQTL 4.08e-01 0.0786 0.0948 0.393 CD8_TEM L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 7.64e-01 0.0277 0.092 0.393 CD8_TEM L2
ENSG00000125703 ATG4C -409700 sc-eQTL 5.84e-01 0.0485 0.0884 0.393 CD8_TEM L2
ENSG00000132849 PATJ 632026 sc-eQTL 4.61e-01 0.066 0.0895 0.393 CD8_TEM L2
ENSG00000162604 TM2D1 649009 sc-eQTL 7.79e-01 0.0256 0.0912 0.393 CD8_TEM L2
ENSG00000162607 USP1 -61865 sc-eQTL 2.25e-01 -0.111 0.091 0.393 CD8_TEM L2
ENSG00000088035 ALG6 -993143 sc-eQTL 5.56e-01 -0.0518 0.0879 0.398 MAIT L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 6.00e-01 -0.0442 0.0842 0.398 MAIT L2
ENSG00000125703 ATG4C -409700 sc-eQTL 7.82e-01 -0.0246 0.0888 0.398 MAIT L2
ENSG00000132849 PATJ 632026 sc-eQTL 8.13e-02 -0.131 0.0746 0.398 MAIT L2
ENSG00000162604 TM2D1 649009 sc-eQTL 1.92e-01 0.112 0.0851 0.398 MAIT L2
ENSG00000162607 USP1 -61865 sc-eQTL 9.80e-01 -0.00219 0.0883 0.398 MAIT L2
ENSG00000088035 ALG6 -993143 sc-eQTL 7.07e-01 0.0342 0.0909 0.398 NK_CD56bright L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 4.78e-01 0.056 0.0787 0.398 NK_CD56bright L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.36e-01 -0.0418 0.088 0.398 NK_CD56bright L2
ENSG00000132849 PATJ 632026 sc-eQTL 4.66e-01 -0.0629 0.0862 0.398 NK_CD56bright L2
ENSG00000162604 TM2D1 649009 sc-eQTL 9.42e-01 0.00636 0.0878 0.398 NK_CD56bright L2
ENSG00000162607 USP1 -61865 sc-eQTL 5.94e-01 0.0505 0.0945 0.398 NK_CD56bright L2
ENSG00000088035 ALG6 -993143 sc-eQTL 1.99e-02 -0.209 0.0889 0.399 NK_CD56dim L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 9.10e-01 0.00883 0.0784 0.399 NK_CD56dim L2
ENSG00000125703 ATG4C -409700 sc-eQTL 3.93e-01 -0.068 0.0795 0.399 NK_CD56dim L2
ENSG00000132849 PATJ 632026 sc-eQTL 1.47e-01 -0.125 0.0859 0.399 NK_CD56dim L2
ENSG00000162604 TM2D1 649009 sc-eQTL 9.10e-01 -0.00924 0.082 0.399 NK_CD56dim L2
ENSG00000162607 USP1 -61865 sc-eQTL 2.65e-01 -0.0979 0.0876 0.399 NK_CD56dim L2
ENSG00000088035 ALG6 -993143 sc-eQTL 5.99e-01 -0.0529 0.1 0.4 NK_HLA L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 8.35e-01 -0.016 0.0768 0.4 NK_HLA L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.02e-01 -0.0467 0.0893 0.4 NK_HLA L2
ENSG00000132849 PATJ 632026 sc-eQTL 3.20e-01 0.0824 0.0827 0.4 NK_HLA L2
ENSG00000162604 TM2D1 649009 sc-eQTL 7.43e-01 0.0309 0.0942 0.4 NK_HLA L2
ENSG00000162607 USP1 -61865 sc-eQTL 4.22e-01 -0.0789 0.098 0.4 NK_HLA L2
ENSG00000088035 ALG6 -993143 sc-eQTL 7.67e-01 0.0256 0.0864 0.399 NK_cytokine L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.99e-01 0.0676 0.08 0.399 NK_cytokine L2
ENSG00000125703 ATG4C -409700 sc-eQTL 4.41e-01 0.0632 0.0818 0.399 NK_cytokine L2
ENSG00000132849 PATJ 632026 sc-eQTL 9.50e-01 0.00545 0.0864 0.399 NK_cytokine L2
ENSG00000162604 TM2D1 649009 sc-eQTL 3.84e-01 0.0736 0.0844 0.399 NK_cytokine L2
ENSG00000162607 USP1 -61865 sc-eQTL 4.36e-01 0.0695 0.0891 0.399 NK_cytokine L2
ENSG00000088035 ALG6 -993143 sc-eQTL 2.48e-01 0.14 0.12 0.407 PB L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 8.80e-01 -0.0196 0.13 0.407 PB L2
ENSG00000125703 ATG4C -409700 sc-eQTL 5.17e-01 0.0733 0.113 0.407 PB L2
ENSG00000132849 PATJ 632026 sc-eQTL 8.91e-01 0.0162 0.117 0.407 PB L2
ENSG00000162604 TM2D1 649009 sc-eQTL 9.10e-02 -0.192 0.112 0.407 PB L2
ENSG00000162607 USP1 -61865 sc-eQTL 9.75e-01 -0.00357 0.112 0.407 PB L2
ENSG00000088035 ALG6 -993143 sc-eQTL 9.30e-01 0.00754 0.0862 0.4 Pro_T L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 7.32e-01 0.0296 0.0865 0.4 Pro_T L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.57e-01 -0.0337 0.0757 0.4 Pro_T L2
ENSG00000132849 PATJ 632026 sc-eQTL 3.47e-01 0.0777 0.0825 0.4 Pro_T L2
ENSG00000162604 TM2D1 649009 sc-eQTL 2.25e-02 -0.21 0.0914 0.4 Pro_T L2
ENSG00000162607 USP1 -61865 sc-eQTL 7.02e-01 -0.02 0.0522 0.4 Pro_T L2
ENSG00000088035 ALG6 -993143 sc-eQTL 9.56e-01 0.0052 0.0938 0.4 Treg L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 2.18e-01 0.106 0.0858 0.4 Treg L2
ENSG00000125703 ATG4C -409700 sc-eQTL 3.29e-01 0.0859 0.0878 0.4 Treg L2
ENSG00000132849 PATJ 632026 sc-eQTL 4.66e-01 0.0595 0.0815 0.4 Treg L2
ENSG00000162604 TM2D1 649009 sc-eQTL 1.14e-01 0.142 0.0893 0.4 Treg L2
ENSG00000162607 USP1 -61865 sc-eQTL 6.36e-01 0.0422 0.0891 0.4 Treg L2
ENSG00000088035 ALG6 -993143 sc-eQTL 6.64e-01 0.0387 0.0888 0.41 cDC L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.90e-01 0.075 0.087 0.41 cDC L2
ENSG00000125703 ATG4C -409700 sc-eQTL 5.39e-01 0.0465 0.0757 0.41 cDC L2
ENSG00000162604 TM2D1 649009 sc-eQTL 3.81e-01 0.0829 0.0944 0.41 cDC L2
ENSG00000162607 USP1 -61865 sc-eQTL 4.59e-01 -0.0633 0.0853 0.41 cDC L2
ENSG00000088035 ALG6 -993143 sc-eQTL 6.56e-01 -0.0378 0.0848 0.4 cMono_IL1B L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 4.64e-01 -0.0655 0.0893 0.4 cMono_IL1B L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.14e-01 0.0318 0.0628 0.4 cMono_IL1B L2
ENSG00000162604 TM2D1 649009 sc-eQTL 9.63e-01 0.00301 0.0649 0.4 cMono_IL1B L2
ENSG00000162607 USP1 -61865 sc-eQTL 2.78e-01 -0.0852 0.0783 0.4 cMono_IL1B L2
ENSG00000240563 L1TD1 179583 sc-eQTL 6.45e-01 -0.0364 0.0789 0.4 cMono_IL1B L2
ENSG00000088035 ALG6 -993143 sc-eQTL 5.31e-01 -0.0596 0.0949 0.4 cMono_S100A L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.38e-01 -0.0844 0.0879 0.4 cMono_S100A L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.43e-01 0.0353 0.0762 0.4 cMono_S100A L2
ENSG00000162604 TM2D1 649009 sc-eQTL 1.20e-01 -0.121 0.0774 0.4 cMono_S100A L2
ENSG00000162607 USP1 -61865 sc-eQTL 2.35e-01 0.105 0.0883 0.4 cMono_S100A L2
ENSG00000240563 L1TD1 179583 sc-eQTL 5.26e-01 0.0467 0.0736 0.4 cMono_S100A L2
ENSG00000088035 ALG6 -993143 sc-eQTL 8.04e-02 -0.188 0.107 0.397 gdT L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.27e-01 -0.104 0.106 0.397 gdT L2
ENSG00000125703 ATG4C -409700 sc-eQTL 7.16e-01 0.0369 0.101 0.397 gdT L2
ENSG00000132849 PATJ 632026 sc-eQTL 9.99e-01 0.000166 0.099 0.397 gdT L2
ENSG00000162604 TM2D1 649009 sc-eQTL 8.27e-01 0.0228 0.104 0.397 gdT L2
ENSG00000162607 USP1 -61865 sc-eQTL 9.43e-01 -0.00732 0.102 0.397 gdT L2
ENSG00000088035 ALG6 -993143 sc-eQTL 2.64e-01 0.0975 0.087 0.411 intMono L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 9.83e-01 -0.00189 0.0892 0.411 intMono L2
ENSG00000125703 ATG4C -409700 sc-eQTL 5.77e-01 -0.0475 0.0851 0.411 intMono L2
ENSG00000162604 TM2D1 649009 sc-eQTL 4.82e-01 0.0634 0.09 0.411 intMono L2
ENSG00000162607 USP1 -61865 sc-eQTL 4.42e-01 -0.0734 0.0952 0.411 intMono L2
ENSG00000240563 L1TD1 179583 sc-eQTL 7.89e-01 0.0188 0.0701 0.411 intMono L2
ENSG00000088035 ALG6 -993143 sc-eQTL 4.51e-01 0.0696 0.0921 0.405 ncMono L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 4.01e-01 0.0763 0.0906 0.405 ncMono L2
ENSG00000125703 ATG4C -409700 sc-eQTL 5.85e-01 -0.0463 0.0847 0.405 ncMono L2
ENSG00000162604 TM2D1 649009 sc-eQTL 7.64e-01 0.0275 0.0914 0.405 ncMono L2
ENSG00000162607 USP1 -61865 sc-eQTL 1.62e-01 -0.126 0.0901 0.405 ncMono L2
ENSG00000240563 L1TD1 179583 sc-eQTL 3.89e-01 -0.0554 0.0641 0.405 ncMono L2
ENSG00000088035 ALG6 -993143 sc-eQTL 5.01e-02 -0.187 0.0947 0.404 pDC L2
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.71e-01 0.0876 0.0977 0.404 pDC L2
ENSG00000125703 ATG4C -409700 sc-eQTL 6.23e-01 -0.0433 0.0878 0.404 pDC L2
ENSG00000162604 TM2D1 649009 sc-eQTL 9.47e-01 0.00574 0.0861 0.404 pDC L2
ENSG00000162607 USP1 -61865 sc-eQTL 8.19e-01 0.0231 0.101 0.404 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -993143 sc-eQTL 8.59e-01 -0.0169 0.0946 0.4 B_Memory LOneK1K
ENSG00000116641 DOCK7 -313954 sc-eQTL 8.78e-01 0.0126 0.0821 0.4 B_Memory LOneK1K
ENSG00000125703 ATG4C -409700 sc-eQTL 6.73e-01 -0.028 0.0664 0.4 B_Memory LOneK1K
ENSG00000132849 PATJ 632026 sc-eQTL 1.21e-01 0.114 0.0731 0.4 B_Memory LOneK1K
ENSG00000162604 TM2D1 649009 sc-eQTL 7.33e-01 0.0285 0.0835 0.4 B_Memory LOneK1K
ENSG00000162607 USP1 -61865 sc-eQTL 9.46e-01 -0.00576 0.0847 0.4 B_Memory LOneK1K
ENSG00000088035 ALG6 -993143 sc-eQTL 2.07e-01 -0.116 0.0919 0.4 B_Naive LOneK1K
ENSG00000116641 DOCK7 -313954 sc-eQTL 5.11e-02 -0.167 0.0853 0.4 B_Naive LOneK1K
ENSG00000125703 ATG4C -409700 sc-eQTL 3.38e-01 0.063 0.0656 0.4 B_Naive LOneK1K
ENSG00000132849 PATJ 632026 sc-eQTL 2.93e-01 0.0826 0.0784 0.4 B_Naive LOneK1K
ENSG00000162604 TM2D1 649009 sc-eQTL 4.89e-01 -0.0519 0.0749 0.4 B_Naive LOneK1K
ENSG00000162607 USP1 -61865 sc-eQTL 1.47e-01 -0.116 0.0794 0.4 B_Naive LOneK1K
ENSG00000088035 ALG6 -993143 sc-eQTL 4.41e-01 -0.065 0.0841 0.4 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -313954 sc-eQTL 4.31e-01 -0.0668 0.0847 0.4 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -409700 sc-eQTL 3.92e-01 0.0502 0.0585 0.4 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 649009 sc-eQTL 2.97e-01 -0.0637 0.061 0.4 CD14_Mono LOneK1K
ENSG00000162607 USP1 -61865 sc-eQTL 9.49e-01 0.0047 0.0741 0.4 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 179583 sc-eQTL 8.16e-01 -0.0187 0.0803 0.4 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -993143 sc-eQTL 7.02e-01 0.0361 0.0943 0.403 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -313954 sc-eQTL 3.23e-01 0.0922 0.0931 0.403 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -409700 sc-eQTL 2.18e-01 -0.0979 0.0793 0.403 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 649009 sc-eQTL 4.00e-01 0.0783 0.0929 0.403 CD16_Mono LOneK1K
ENSG00000162607 USP1 -61865 sc-eQTL 3.44e-01 -0.0821 0.0866 0.403 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 179583 sc-eQTL 6.74e-01 -0.0249 0.0592 0.403 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -993143 sc-eQTL 1.57e-01 -0.117 0.0826 0.399 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -313954 sc-eQTL 5.46e-01 0.0449 0.0743 0.399 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -409700 sc-eQTL 5.82e-01 -0.0409 0.0742 0.399 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 632026 sc-eQTL 2.89e-01 -0.0848 0.0798 0.399 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 649009 sc-eQTL 8.37e-01 -0.0151 0.0733 0.399 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -61865 sc-eQTL 3.70e-01 -0.0716 0.0797 0.399 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -313936 eQTL 0.633 -0.0118 0.0248 0.017 0.00186 0.387

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162607 \N -61865 1.09e-05 1.25e-05 1.92e-06 7.15e-06 2.32e-06 5.65e-06 1.38e-05 2.14e-06 1.07e-05 6.06e-06 1.5e-05 6.62e-06 1.85e-05 4.18e-06 3.87e-06 7.21e-06 5.99e-06 9.73e-06 3.34e-06 3.15e-06 6.84e-06 1.15e-05 1.05e-05 3.67e-06 2e-05 4.73e-06 7.15e-06 5.42e-06 1.33e-05 9.25e-06 7.59e-06 1.05e-06 1.28e-06 3.78e-06 5.44e-06 2.85e-06 1.79e-06 2.02e-06 1.96e-06 1.23e-06 1.12e-06 1.37e-05 1.6e-06 3.05e-07 9.15e-07 2.35e-06 2.08e-06 8.29e-07 5.34e-07