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Genes within 1Mb (chr1:62373896:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -993679 sc-eQTL 5.97e-01 0.0451 0.0852 0.714 B L1
ENSG00000116641 DOCK7 -314490 sc-eQTL 9.60e-01 0.00423 0.0853 0.714 B L1
ENSG00000125703 ATG4C -410236 sc-eQTL 4.40e-01 0.0458 0.0592 0.714 B L1
ENSG00000132849 PATJ 631490 sc-eQTL 1.80e-01 0.0964 0.0716 0.714 B L1
ENSG00000162604 TM2D1 648473 sc-eQTL 9.23e-01 -0.00691 0.0719 0.714 B L1
ENSG00000162607 USP1 -62401 sc-eQTL 4.22e-01 -0.0658 0.0818 0.714 B L1
ENSG00000088035 ALG6 -993679 sc-eQTL 2.26e-01 0.0946 0.0779 0.714 CD4T L1
ENSG00000116641 DOCK7 -314490 sc-eQTL 7.79e-02 -0.139 0.0786 0.714 CD4T L1
ENSG00000125703 ATG4C -410236 sc-eQTL 8.57e-01 0.0115 0.0639 0.714 CD4T L1
ENSG00000132849 PATJ 631490 sc-eQTL 1.33e-01 -0.0779 0.0516 0.714 CD4T L1
ENSG00000162604 TM2D1 648473 sc-eQTL 4.28e-01 0.05 0.063 0.714 CD4T L1
ENSG00000162607 USP1 -62401 sc-eQTL 6.20e-01 0.0308 0.062 0.714 CD4T L1
ENSG00000088035 ALG6 -993679 sc-eQTL 8.53e-01 -0.0158 0.0854 0.714 CD8T L1
ENSG00000116641 DOCK7 -314490 sc-eQTL 6.28e-01 0.0419 0.0865 0.714 CD8T L1
ENSG00000125703 ATG4C -410236 sc-eQTL 8.62e-01 -0.0144 0.0822 0.714 CD8T L1
ENSG00000132849 PATJ 631490 sc-eQTL 4.17e-01 0.0407 0.05 0.714 CD8T L1
ENSG00000162604 TM2D1 648473 sc-eQTL 1.96e-01 -0.0972 0.0749 0.714 CD8T L1
ENSG00000162607 USP1 -62401 sc-eQTL 4.45e-01 -0.0547 0.0715 0.714 CD8T L1
ENSG00000088035 ALG6 -993679 sc-eQTL 6.16e-01 -0.0451 0.0899 0.718 DC L1
ENSG00000116641 DOCK7 -314490 sc-eQTL 3.29e-01 0.09 0.092 0.718 DC L1
ENSG00000125703 ATG4C -410236 sc-eQTL 9.07e-01 -0.00848 0.0721 0.718 DC L1
ENSG00000162604 TM2D1 648473 sc-eQTL 4.77e-01 0.0599 0.0839 0.718 DC L1
ENSG00000162607 USP1 -62401 sc-eQTL 8.52e-01 0.0165 0.088 0.718 DC L1
ENSG00000088035 ALG6 -993679 sc-eQTL 6.35e-01 -0.0423 0.089 0.714 Mono L1
ENSG00000116641 DOCK7 -314490 sc-eQTL 2.37e-01 -0.102 0.0858 0.714 Mono L1
ENSG00000125703 ATG4C -410236 sc-eQTL 1.56e-01 0.0825 0.0579 0.714 Mono L1
ENSG00000162604 TM2D1 648473 sc-eQTL 8.37e-01 -0.0133 0.0646 0.714 Mono L1
ENSG00000162607 USP1 -62401 sc-eQTL 3.57e-01 0.0696 0.0754 0.714 Mono L1
ENSG00000240563 L1TD1 179047 sc-eQTL 7.15e-01 -0.0258 0.0705 0.714 Mono L1
ENSG00000088035 ALG6 -993679 sc-eQTL 2.41e-01 -0.0984 0.0837 0.715 NK L1
ENSG00000116641 DOCK7 -314490 sc-eQTL 9.83e-01 0.00148 0.0691 0.715 NK L1
ENSG00000125703 ATG4C -410236 sc-eQTL 3.78e-01 -0.0655 0.0741 0.715 NK L1
ENSG00000132849 PATJ 631490 sc-eQTL 1.82e-01 -0.0971 0.0725 0.715 NK L1
ENSG00000162604 TM2D1 648473 sc-eQTL 4.97e-01 -0.0507 0.0744 0.715 NK L1
ENSG00000162607 USP1 -62401 sc-eQTL 3.03e-01 -0.085 0.0823 0.715 NK L1
ENSG00000088035 ALG6 -993679 sc-eQTL 9.20e-01 0.00829 0.0826 0.714 Other_T L1
ENSG00000116641 DOCK7 -314490 sc-eQTL 2.10e-01 -0.106 0.084 0.714 Other_T L1
ENSG00000125703 ATG4C -410236 sc-eQTL 6.79e-01 -0.0303 0.073 0.714 Other_T L1
ENSG00000132849 PATJ 631490 sc-eQTL 2.24e-01 -0.0827 0.0678 0.714 Other_T L1
ENSG00000162604 TM2D1 648473 sc-eQTL 5.99e-01 -0.042 0.0797 0.714 Other_T L1
ENSG00000162607 USP1 -62401 sc-eQTL 8.71e-01 0.00914 0.0561 0.714 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -993679 sc-eQTL 2.01e-01 0.135 0.105 0.717 B_Activated L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 7.50e-01 -0.0314 0.0985 0.717 B_Activated L2
ENSG00000125703 ATG4C -410236 sc-eQTL 5.20e-01 0.0666 0.103 0.717 B_Activated L2
ENSG00000132849 PATJ 631490 sc-eQTL 5.58e-01 0.0517 0.088 0.717 B_Activated L2
ENSG00000162604 TM2D1 648473 sc-eQTL 4.30e-01 0.0883 0.112 0.717 B_Activated L2
ENSG00000162607 USP1 -62401 sc-eQTL 9.11e-01 -0.0123 0.11 0.717 B_Activated L2
ENSG00000088035 ALG6 -993679 sc-eQTL 3.51e-01 0.0933 0.0997 0.715 B_Intermediate L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 5.03e-01 0.064 0.0954 0.715 B_Intermediate L2
ENSG00000125703 ATG4C -410236 sc-eQTL 8.56e-01 0.0146 0.0808 0.715 B_Intermediate L2
ENSG00000132849 PATJ 631490 sc-eQTL 8.47e-01 -0.0169 0.0875 0.715 B_Intermediate L2
ENSG00000162604 TM2D1 648473 sc-eQTL 9.52e-01 0.00557 0.0918 0.715 B_Intermediate L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.88e-01 -0.0667 0.096 0.715 B_Intermediate L2
ENSG00000088035 ALG6 -993679 sc-eQTL 7.09e-01 -0.0366 0.0981 0.711 B_Memory L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 4.68e-01 -0.0668 0.0919 0.711 B_Memory L2
ENSG00000125703 ATG4C -410236 sc-eQTL 6.80e-01 -0.0361 0.0874 0.711 B_Memory L2
ENSG00000132849 PATJ 631490 sc-eQTL 5.36e-02 0.168 0.0866 0.711 B_Memory L2
ENSG00000162604 TM2D1 648473 sc-eQTL 9.47e-01 0.00655 0.0982 0.711 B_Memory L2
ENSG00000162607 USP1 -62401 sc-eQTL 6.86e-01 -0.0408 0.101 0.711 B_Memory L2
ENSG00000088035 ALG6 -993679 sc-eQTL 5.95e-01 0.0519 0.0974 0.714 B_Naive1 L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 1.20e-01 -0.145 0.0928 0.714 B_Naive1 L2
ENSG00000125703 ATG4C -410236 sc-eQTL 8.79e-01 -0.011 0.0719 0.714 B_Naive1 L2
ENSG00000132849 PATJ 631490 sc-eQTL 5.94e-01 0.0494 0.0923 0.714 B_Naive1 L2
ENSG00000162604 TM2D1 648473 sc-eQTL 7.73e-01 -0.0245 0.085 0.714 B_Naive1 L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.28e-01 -0.0664 0.0838 0.714 B_Naive1 L2
ENSG00000088035 ALG6 -993679 sc-eQTL 8.87e-01 -0.0142 0.0997 0.712 B_Naive2 L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 9.92e-01 -0.00101 0.0959 0.712 B_Naive2 L2
ENSG00000125703 ATG4C -410236 sc-eQTL 5.84e-01 0.0506 0.0922 0.712 B_Naive2 L2
ENSG00000132849 PATJ 631490 sc-eQTL 7.92e-01 0.0249 0.0945 0.712 B_Naive2 L2
ENSG00000162604 TM2D1 648473 sc-eQTL 4.09e-01 -0.079 0.0955 0.712 B_Naive2 L2
ENSG00000162607 USP1 -62401 sc-eQTL 9.36e-01 0.00762 0.0953 0.712 B_Naive2 L2
ENSG00000088035 ALG6 -993679 sc-eQTL 4.71e-01 0.0743 0.103 0.716 CD4_CTL L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 6.13e-01 -0.0456 0.09 0.716 CD4_CTL L2
ENSG00000125703 ATG4C -410236 sc-eQTL 2.03e-01 -0.119 0.0928 0.716 CD4_CTL L2
ENSG00000132849 PATJ 631490 sc-eQTL 8.35e-01 -0.0156 0.0746 0.716 CD4_CTL L2
ENSG00000162604 TM2D1 648473 sc-eQTL 1.68e-01 -0.131 0.095 0.716 CD4_CTL L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.81e-01 -0.067 0.0948 0.716 CD4_CTL L2
ENSG00000088035 ALG6 -993679 sc-eQTL 2.40e-01 0.102 0.0867 0.714 CD4_Naive L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 3.44e-02 -0.18 0.0845 0.714 CD4_Naive L2
ENSG00000125703 ATG4C -410236 sc-eQTL 8.50e-01 -0.0143 0.0755 0.714 CD4_Naive L2
ENSG00000132849 PATJ 631490 sc-eQTL 2.32e-01 -0.0633 0.0528 0.714 CD4_Naive L2
ENSG00000162604 TM2D1 648473 sc-eQTL 1.89e-01 0.1 0.076 0.714 CD4_Naive L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.70e-01 0.051 0.0704 0.714 CD4_Naive L2
ENSG00000088035 ALG6 -993679 sc-eQTL 9.85e-01 0.00184 0.0951 0.714 CD4_TCM L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 9.51e-01 0.00523 0.0843 0.714 CD4_TCM L2
ENSG00000125703 ATG4C -410236 sc-eQTL 3.34e-01 0.0793 0.0819 0.714 CD4_TCM L2
ENSG00000132849 PATJ 631490 sc-eQTL 4.01e-01 -0.0554 0.0658 0.714 CD4_TCM L2
ENSG00000162604 TM2D1 648473 sc-eQTL 1.20e-01 -0.119 0.0764 0.714 CD4_TCM L2
ENSG00000162607 USP1 -62401 sc-eQTL 5.75e-01 0.0445 0.0793 0.714 CD4_TCM L2
ENSG00000088035 ALG6 -993679 sc-eQTL 6.24e-01 -0.0478 0.0975 0.714 CD4_TEM L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 5.13e-01 -0.0622 0.095 0.714 CD4_TEM L2
ENSG00000125703 ATG4C -410236 sc-eQTL 3.36e-01 0.0889 0.0921 0.714 CD4_TEM L2
ENSG00000132849 PATJ 631490 sc-eQTL 1.30e-01 -0.13 0.0856 0.714 CD4_TEM L2
ENSG00000162604 TM2D1 648473 sc-eQTL 9.70e-01 0.00346 0.0906 0.714 CD4_TEM L2
ENSG00000162607 USP1 -62401 sc-eQTL 2.40e-01 -0.106 0.09 0.714 CD4_TEM L2
ENSG00000088035 ALG6 -993679 sc-eQTL 5.82e-01 0.0515 0.0935 0.714 CD8_CTL L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 1.92e-02 0.207 0.0876 0.714 CD8_CTL L2
ENSG00000125703 ATG4C -410236 sc-eQTL 6.64e-01 0.0411 0.0945 0.714 CD8_CTL L2
ENSG00000132849 PATJ 631490 sc-eQTL 7.99e-01 -0.0228 0.0895 0.714 CD8_CTL L2
ENSG00000162604 TM2D1 648473 sc-eQTL 3.80e-01 -0.0721 0.082 0.714 CD8_CTL L2
ENSG00000162607 USP1 -62401 sc-eQTL 8.03e-01 -0.022 0.088 0.714 CD8_CTL L2
ENSG00000088035 ALG6 -993679 sc-eQTL 8.55e-01 0.017 0.0931 0.714 CD8_Naive L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 4.54e-01 -0.0721 0.0961 0.714 CD8_Naive L2
ENSG00000125703 ATG4C -410236 sc-eQTL 3.83e-01 -0.0806 0.0922 0.714 CD8_Naive L2
ENSG00000132849 PATJ 631490 sc-eQTL 1.53e-01 0.101 0.0703 0.714 CD8_Naive L2
ENSG00000162604 TM2D1 648473 sc-eQTL 3.48e-01 -0.0811 0.0861 0.714 CD8_Naive L2
ENSG00000162607 USP1 -62401 sc-eQTL 5.64e-01 -0.0457 0.079 0.714 CD8_Naive L2
ENSG00000088035 ALG6 -993679 sc-eQTL 9.90e-01 0.00119 0.0981 0.708 CD8_TCM L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 8.38e-01 0.0196 0.0957 0.708 CD8_TCM L2
ENSG00000125703 ATG4C -410236 sc-eQTL 2.44e-01 -0.114 0.0975 0.708 CD8_TCM L2
ENSG00000132849 PATJ 631490 sc-eQTL 2.42e-01 0.105 0.0897 0.708 CD8_TCM L2
ENSG00000162604 TM2D1 648473 sc-eQTL 9.03e-01 -0.0112 0.0916 0.708 CD8_TCM L2
ENSG00000162607 USP1 -62401 sc-eQTL 5.18e-01 -0.0593 0.0914 0.708 CD8_TCM L2
ENSG00000088035 ALG6 -993679 sc-eQTL 9.66e-01 0.00442 0.102 0.712 CD8_TEM L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 9.62e-01 -0.00477 0.0992 0.712 CD8_TEM L2
ENSG00000125703 ATG4C -410236 sc-eQTL 6.22e-01 0.0471 0.0953 0.712 CD8_TEM L2
ENSG00000132849 PATJ 631490 sc-eQTL 7.32e-01 0.0331 0.0966 0.712 CD8_TEM L2
ENSG00000162604 TM2D1 648473 sc-eQTL 5.55e-01 0.0581 0.0983 0.712 CD8_TEM L2
ENSG00000162607 USP1 -62401 sc-eQTL 5.17e-01 0.0638 0.0984 0.712 CD8_TEM L2
ENSG00000088035 ALG6 -993679 sc-eQTL 7.14e-01 -0.0345 0.094 0.714 MAIT L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 4.37e-02 -0.181 0.0892 0.714 MAIT L2
ENSG00000125703 ATG4C -410236 sc-eQTL 4.55e-01 -0.071 0.0949 0.714 MAIT L2
ENSG00000132849 PATJ 631490 sc-eQTL 4.20e-01 -0.0648 0.0802 0.714 MAIT L2
ENSG00000162604 TM2D1 648473 sc-eQTL 1.18e-01 0.142 0.0908 0.714 MAIT L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.09e-01 0.078 0.0943 0.714 MAIT L2
ENSG00000088035 ALG6 -993679 sc-eQTL 3.61e-01 0.0889 0.097 0.716 NK_CD56bright L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 3.28e-01 -0.0824 0.0841 0.716 NK_CD56bright L2
ENSG00000125703 ATG4C -410236 sc-eQTL 1.34e-01 -0.141 0.0936 0.716 NK_CD56bright L2
ENSG00000132849 PATJ 631490 sc-eQTL 6.27e-01 -0.0449 0.0922 0.716 NK_CD56bright L2
ENSG00000162604 TM2D1 648473 sc-eQTL 2.95e-01 -0.0983 0.0936 0.716 NK_CD56bright L2
ENSG00000162607 USP1 -62401 sc-eQTL 8.95e-01 0.0134 0.101 0.716 NK_CD56bright L2
ENSG00000088035 ALG6 -993679 sc-eQTL 1.00e-02 -0.244 0.0938 0.713 NK_CD56dim L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 9.76e-01 -0.00247 0.0829 0.713 NK_CD56dim L2
ENSG00000125703 ATG4C -410236 sc-eQTL 1.54e-01 -0.12 0.0838 0.713 NK_CD56dim L2
ENSG00000132849 PATJ 631490 sc-eQTL 1.08e-01 -0.147 0.0908 0.713 NK_CD56dim L2
ENSG00000162604 TM2D1 648473 sc-eQTL 6.13e-01 -0.0439 0.0866 0.713 NK_CD56dim L2
ENSG00000162607 USP1 -62401 sc-eQTL 3.39e-02 -0.196 0.0919 0.713 NK_CD56dim L2
ENSG00000088035 ALG6 -993679 sc-eQTL 8.52e-01 0.0196 0.105 0.717 NK_HLA L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 8.21e-01 0.0182 0.0802 0.717 NK_HLA L2
ENSG00000125703 ATG4C -410236 sc-eQTL 8.25e-01 -0.0206 0.0932 0.717 NK_HLA L2
ENSG00000132849 PATJ 631490 sc-eQTL 9.31e-01 -0.00754 0.0865 0.717 NK_HLA L2
ENSG00000162604 TM2D1 648473 sc-eQTL 2.73e-01 0.108 0.098 0.717 NK_HLA L2
ENSG00000162607 USP1 -62401 sc-eQTL 7.05e-01 0.0389 0.102 0.717 NK_HLA L2
ENSG00000088035 ALG6 -993679 sc-eQTL 8.15e-01 -0.0217 0.0925 0.713 NK_cytokine L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 3.76e-01 0.0759 0.0856 0.713 NK_cytokine L2
ENSG00000125703 ATG4C -410236 sc-eQTL 4.20e-01 0.0707 0.0876 0.713 NK_cytokine L2
ENSG00000132849 PATJ 631490 sc-eQTL 5.38e-01 -0.057 0.0924 0.713 NK_cytokine L2
ENSG00000162604 TM2D1 648473 sc-eQTL 6.08e-01 0.0464 0.0904 0.713 NK_cytokine L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.27e-01 0.0758 0.0953 0.713 NK_cytokine L2
ENSG00000088035 ALG6 -993679 sc-eQTL 5.53e-01 0.0733 0.123 0.707 PB L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 4.48e-01 0.1 0.132 0.707 PB L2
ENSG00000125703 ATG4C -410236 sc-eQTL 5.27e-01 0.0729 0.115 0.707 PB L2
ENSG00000132849 PATJ 631490 sc-eQTL 6.61e-01 -0.0524 0.119 0.707 PB L2
ENSG00000162604 TM2D1 648473 sc-eQTL 4.21e-01 -0.0934 0.116 0.707 PB L2
ENSG00000162607 USP1 -62401 sc-eQTL 2.21e-01 -0.14 0.114 0.707 PB L2
ENSG00000088035 ALG6 -993679 sc-eQTL 8.81e-01 -0.0136 0.0908 0.715 Pro_T L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 4.16e-01 0.0741 0.0909 0.715 Pro_T L2
ENSG00000125703 ATG4C -410236 sc-eQTL 3.24e-01 -0.0787 0.0796 0.715 Pro_T L2
ENSG00000132849 PATJ 631490 sc-eQTL 8.82e-01 0.013 0.087 0.715 Pro_T L2
ENSG00000162604 TM2D1 648473 sc-eQTL 7.43e-04 -0.325 0.0948 0.715 Pro_T L2
ENSG00000162607 USP1 -62401 sc-eQTL 6.44e-01 -0.0255 0.055 0.715 Pro_T L2
ENSG00000088035 ALG6 -993679 sc-eQTL 6.82e-01 -0.041 0.0999 0.714 Treg L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 2.92e-01 0.0966 0.0915 0.714 Treg L2
ENSG00000125703 ATG4C -410236 sc-eQTL 2.14e-01 0.116 0.0934 0.714 Treg L2
ENSG00000132849 PATJ 631490 sc-eQTL 8.82e-01 0.0129 0.0868 0.714 Treg L2
ENSG00000162604 TM2D1 648473 sc-eQTL 2.00e-01 0.122 0.0953 0.714 Treg L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.69e-01 0.0688 0.0947 0.714 Treg L2
ENSG00000088035 ALG6 -993679 sc-eQTL 4.58e-01 0.0722 0.097 0.727 cDC L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 5.93e-01 0.051 0.0952 0.727 cDC L2
ENSG00000125703 ATG4C -410236 sc-eQTL 3.74e-01 -0.0736 0.0826 0.727 cDC L2
ENSG00000162604 TM2D1 648473 sc-eQTL 8.61e-01 0.0181 0.103 0.727 cDC L2
ENSG00000162607 USP1 -62401 sc-eQTL 9.24e-01 0.00888 0.0934 0.727 cDC L2
ENSG00000088035 ALG6 -993679 sc-eQTL 3.24e-01 -0.0885 0.0895 0.714 cMono_IL1B L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 8.65e-02 -0.162 0.0939 0.714 cMono_IL1B L2
ENSG00000125703 ATG4C -410236 sc-eQTL 1.08e-01 0.107 0.0661 0.714 cMono_IL1B L2
ENSG00000162604 TM2D1 648473 sc-eQTL 8.35e-01 0.0143 0.0686 0.714 cMono_IL1B L2
ENSG00000162607 USP1 -62401 sc-eQTL 7.39e-01 0.0277 0.0831 0.714 cMono_IL1B L2
ENSG00000240563 L1TD1 179047 sc-eQTL 5.08e-01 -0.0553 0.0834 0.714 cMono_IL1B L2
ENSG00000088035 ALG6 -993679 sc-eQTL 4.18e-01 0.0821 0.101 0.714 cMono_S100A L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 8.38e-01 0.0192 0.0939 0.714 cMono_S100A L2
ENSG00000125703 ATG4C -410236 sc-eQTL 7.91e-01 0.0215 0.0813 0.714 cMono_S100A L2
ENSG00000162604 TM2D1 648473 sc-eQTL 4.91e-01 -0.0571 0.0829 0.714 cMono_S100A L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.46e-01 0.072 0.0943 0.714 cMono_S100A L2
ENSG00000240563 L1TD1 179047 sc-eQTL 7.10e-01 0.0292 0.0785 0.714 cMono_S100A L2
ENSG00000088035 ALG6 -993679 sc-eQTL 9.42e-01 0.00843 0.116 0.718 gdT L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 5.20e-01 -0.073 0.113 0.718 gdT L2
ENSG00000125703 ATG4C -410236 sc-eQTL 9.10e-02 0.182 0.107 0.718 gdT L2
ENSG00000132849 PATJ 631490 sc-eQTL 9.92e-01 -0.00104 0.106 0.718 gdT L2
ENSG00000162604 TM2D1 648473 sc-eQTL 6.26e-01 -0.0544 0.111 0.718 gdT L2
ENSG00000162607 USP1 -62401 sc-eQTL 5.30e-01 0.0684 0.109 0.718 gdT L2
ENSG00000088035 ALG6 -993679 sc-eQTL 4.63e-01 -0.0694 0.0945 0.724 intMono L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 5.95e-01 -0.0514 0.0966 0.724 intMono L2
ENSG00000125703 ATG4C -410236 sc-eQTL 6.15e-01 -0.0465 0.0922 0.724 intMono L2
ENSG00000162604 TM2D1 648473 sc-eQTL 9.55e-01 -0.00552 0.0977 0.724 intMono L2
ENSG00000162607 USP1 -62401 sc-eQTL 4.98e-01 0.07 0.103 0.724 intMono L2
ENSG00000240563 L1TD1 179047 sc-eQTL 7.69e-01 0.0223 0.076 0.724 intMono L2
ENSG00000088035 ALG6 -993679 sc-eQTL 6.32e-01 0.0465 0.0971 0.719 ncMono L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 6.19e-01 0.0476 0.0956 0.719 ncMono L2
ENSG00000125703 ATG4C -410236 sc-eQTL 9.69e-01 0.00346 0.0893 0.719 ncMono L2
ENSG00000162604 TM2D1 648473 sc-eQTL 1.01e-01 0.158 0.0957 0.719 ncMono L2
ENSG00000162607 USP1 -62401 sc-eQTL 1.98e-01 -0.123 0.0951 0.719 ncMono L2
ENSG00000240563 L1TD1 179047 sc-eQTL 7.19e-01 -0.0244 0.0677 0.719 ncMono L2
ENSG00000088035 ALG6 -993679 sc-eQTL 3.28e-01 -0.102 0.103 0.718 pDC L2
ENSG00000116641 DOCK7 -314490 sc-eQTL 3.67e-01 0.0957 0.106 0.718 pDC L2
ENSG00000125703 ATG4C -410236 sc-eQTL 6.10e-01 0.0486 0.095 0.718 pDC L2
ENSG00000162604 TM2D1 648473 sc-eQTL 9.94e-01 0.000694 0.0931 0.718 pDC L2
ENSG00000162607 USP1 -62401 sc-eQTL 5.44e-01 0.0661 0.109 0.718 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -993679 sc-eQTL 7.63e-01 0.0305 0.101 0.714 B_Memory LOneK1K
ENSG00000116641 DOCK7 -314490 sc-eQTL 6.49e-01 0.04 0.0877 0.714 B_Memory LOneK1K
ENSG00000125703 ATG4C -410236 sc-eQTL 7.26e-01 0.0249 0.0709 0.714 B_Memory LOneK1K
ENSG00000132849 PATJ 631490 sc-eQTL 1.74e-01 0.107 0.0782 0.714 B_Memory LOneK1K
ENSG00000162604 TM2D1 648473 sc-eQTL 6.11e-01 0.0453 0.0891 0.714 B_Memory LOneK1K
ENSG00000162607 USP1 -62401 sc-eQTL 6.57e-01 -0.0402 0.0904 0.714 B_Memory LOneK1K
ENSG00000088035 ALG6 -993679 sc-eQTL 5.79e-01 0.0543 0.0976 0.714 B_Naive LOneK1K
ENSG00000116641 DOCK7 -314490 sc-eQTL 1.70e-01 -0.125 0.0908 0.714 B_Naive LOneK1K
ENSG00000125703 ATG4C -410236 sc-eQTL 7.07e-01 0.0262 0.0696 0.714 B_Naive LOneK1K
ENSG00000132849 PATJ 631490 sc-eQTL 4.79e-01 0.059 0.0832 0.714 B_Naive LOneK1K
ENSG00000162604 TM2D1 648473 sc-eQTL 7.41e-01 -0.0262 0.0794 0.714 B_Naive LOneK1K
ENSG00000162607 USP1 -62401 sc-eQTL 4.48e-01 -0.0643 0.0844 0.714 B_Naive LOneK1K
ENSG00000088035 ALG6 -993679 sc-eQTL 7.44e-01 -0.029 0.0885 0.714 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -314490 sc-eQTL 2.63e-01 -0.0997 0.0889 0.714 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -410236 sc-eQTL 1.08e-01 0.0988 0.0613 0.714 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 648473 sc-eQTL 5.02e-01 -0.0432 0.0642 0.714 CD14_Mono LOneK1K
ENSG00000162607 USP1 -62401 sc-eQTL 4.78e-01 0.0553 0.0778 0.714 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 179047 sc-eQTL 4.61e-01 -0.0622 0.0844 0.714 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -993679 sc-eQTL 7.75e-01 -0.0283 0.0989 0.716 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -314490 sc-eQTL 8.74e-01 0.0155 0.0979 0.716 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -410236 sc-eQTL 3.51e-01 -0.0779 0.0833 0.716 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 648473 sc-eQTL 1.86e-01 0.129 0.0972 0.716 CD16_Mono LOneK1K
ENSG00000162607 USP1 -62401 sc-eQTL 8.99e-01 0.0116 0.091 0.716 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 179047 sc-eQTL 9.85e-01 -0.00118 0.0621 0.716 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -993679 sc-eQTL 1.29e-01 -0.133 0.0875 0.713 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -314490 sc-eQTL 5.71e-01 0.0447 0.0787 0.713 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -410236 sc-eQTL 3.32e-01 -0.0764 0.0785 0.713 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 631490 sc-eQTL 1.82e-01 -0.113 0.0844 0.713 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 648473 sc-eQTL 6.79e-01 -0.0322 0.0777 0.713 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -62401 sc-eQTL 7.47e-02 -0.15 0.084 0.713 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162604 TM2D1 648473 eQTL 0.0676 -0.0414 0.0226 0.0012 0.0 0.304

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina