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Genes within 1Mb (chr1:62369972:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -997603 sc-eQTL 2.80e-01 -0.0878 0.081 0.385 B L1
ENSG00000116641 DOCK7 -318414 sc-eQTL 5.80e-01 -0.045 0.0812 0.385 B L1
ENSG00000125703 ATG4C -414160 sc-eQTL 4.82e-01 0.0397 0.0564 0.385 B L1
ENSG00000132849 PATJ 627566 sc-eQTL 5.67e-02 0.13 0.0679 0.385 B L1
ENSG00000162604 TM2D1 644549 sc-eQTL 3.15e-01 -0.0688 0.0683 0.385 B L1
ENSG00000162607 USP1 -66325 sc-eQTL 2.20e-01 -0.0956 0.0777 0.385 B L1
ENSG00000088035 ALG6 -997603 sc-eQTL 6.72e-01 -0.032 0.0756 0.385 CD4T L1
ENSG00000116641 DOCK7 -318414 sc-eQTL 2.24e-01 -0.0929 0.0763 0.385 CD4T L1
ENSG00000125703 ATG4C -414160 sc-eQTL 4.42e-01 0.0475 0.0617 0.385 CD4T L1
ENSG00000132849 PATJ 627566 sc-eQTL 7.08e-01 0.0188 0.0501 0.385 CD4T L1
ENSG00000162604 TM2D1 644549 sc-eQTL 2.75e-01 0.0665 0.0608 0.385 CD4T L1
ENSG00000162607 USP1 -66325 sc-eQTL 9.48e-01 -0.00392 0.0599 0.385 CD4T L1
ENSG00000088035 ALG6 -997603 sc-eQTL 5.89e-01 0.0447 0.0825 0.385 CD8T L1
ENSG00000116641 DOCK7 -318414 sc-eQTL 9.29e-01 -0.00748 0.0837 0.385 CD8T L1
ENSG00000125703 ATG4C -414160 sc-eQTL 1.76e-01 0.107 0.0791 0.385 CD8T L1
ENSG00000132849 PATJ 627566 sc-eQTL 6.09e-01 0.0248 0.0484 0.385 CD8T L1
ENSG00000162604 TM2D1 644549 sc-eQTL 1.08e-01 -0.117 0.0723 0.385 CD8T L1
ENSG00000162607 USP1 -66325 sc-eQTL 1.67e-01 -0.0955 0.0689 0.385 CD8T L1
ENSG00000088035 ALG6 -997603 sc-eQTL 4.16e-01 -0.0699 0.0859 0.387 DC L1
ENSG00000116641 DOCK7 -318414 sc-eQTL 2.80e-01 0.0953 0.0879 0.387 DC L1
ENSG00000125703 ATG4C -414160 sc-eQTL 9.52e-01 0.00418 0.069 0.387 DC L1
ENSG00000162604 TM2D1 644549 sc-eQTL 3.15e-01 0.0807 0.0802 0.387 DC L1
ENSG00000162607 USP1 -66325 sc-eQTL 4.26e-01 -0.067 0.0841 0.387 DC L1
ENSG00000088035 ALG6 -997603 sc-eQTL 5.89e-01 -0.0468 0.0866 0.385 Mono L1
ENSG00000116641 DOCK7 -318414 sc-eQTL 5.42e-01 -0.0511 0.0837 0.385 Mono L1
ENSG00000125703 ATG4C -414160 sc-eQTL 5.60e-01 0.033 0.0566 0.385 Mono L1
ENSG00000162604 TM2D1 644549 sc-eQTL 5.61e-01 -0.0366 0.0628 0.385 Mono L1
ENSG00000162607 USP1 -66325 sc-eQTL 9.42e-01 0.00535 0.0735 0.385 Mono L1
ENSG00000240563 L1TD1 175123 sc-eQTL 4.28e-01 -0.0543 0.0685 0.385 Mono L1
ENSG00000088035 ALG6 -997603 sc-eQTL 1.89e-01 -0.107 0.0812 0.386 NK L1
ENSG00000116641 DOCK7 -318414 sc-eQTL 4.19e-01 0.0543 0.067 0.386 NK L1
ENSG00000125703 ATG4C -414160 sc-eQTL 7.43e-01 -0.0237 0.0721 0.386 NK L1
ENSG00000132849 PATJ 627566 sc-eQTL 5.60e-01 -0.0412 0.0706 0.386 NK L1
ENSG00000162604 TM2D1 644549 sc-eQTL 9.81e-01 -0.00174 0.0724 0.386 NK L1
ENSG00000162607 USP1 -66325 sc-eQTL 6.58e-01 -0.0355 0.08 0.386 NK L1
ENSG00000088035 ALG6 -997603 sc-eQTL 7.56e-01 -0.0247 0.0794 0.385 Other_T L1
ENSG00000116641 DOCK7 -318414 sc-eQTL 4.41e-01 -0.0625 0.081 0.385 Other_T L1
ENSG00000125703 ATG4C -414160 sc-eQTL 6.65e-01 -0.0305 0.0702 0.385 Other_T L1
ENSG00000132849 PATJ 627566 sc-eQTL 1.01e-01 -0.107 0.065 0.385 Other_T L1
ENSG00000162604 TM2D1 644549 sc-eQTL 9.51e-01 -0.00473 0.0767 0.385 Other_T L1
ENSG00000162607 USP1 -66325 sc-eQTL 8.69e-01 -0.00889 0.054 0.385 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -997603 sc-eQTL 8.69e-01 0.0167 0.101 0.38 B_Activated L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 4.79e-01 -0.0666 0.0937 0.38 B_Activated L2
ENSG00000125703 ATG4C -414160 sc-eQTL 2.27e-01 0.119 0.0983 0.38 B_Activated L2
ENSG00000132849 PATJ 627566 sc-eQTL 5.23e-01 0.0537 0.0838 0.38 B_Activated L2
ENSG00000162604 TM2D1 644549 sc-eQTL 7.78e-01 -0.03 0.107 0.38 B_Activated L2
ENSG00000162607 USP1 -66325 sc-eQTL 3.31e-01 0.102 0.104 0.38 B_Activated L2
ENSG00000088035 ALG6 -997603 sc-eQTL 6.40e-01 0.0443 0.0945 0.386 B_Intermediate L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 8.34e-01 0.019 0.0903 0.386 B_Intermediate L2
ENSG00000125703 ATG4C -414160 sc-eQTL 6.04e-02 -0.143 0.0758 0.386 B_Intermediate L2
ENSG00000132849 PATJ 627566 sc-eQTL 8.20e-01 0.0189 0.0827 0.386 B_Intermediate L2
ENSG00000162604 TM2D1 644549 sc-eQTL 8.82e-01 0.0129 0.0868 0.386 B_Intermediate L2
ENSG00000162607 USP1 -66325 sc-eQTL 5.87e-01 -0.0494 0.0908 0.386 B_Intermediate L2
ENSG00000088035 ALG6 -997603 sc-eQTL 7.03e-01 0.0361 0.0946 0.384 B_Memory L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 7.83e-01 -0.0245 0.0887 0.384 B_Memory L2
ENSG00000125703 ATG4C -414160 sc-eQTL 9.07e-01 -0.00989 0.0843 0.384 B_Memory L2
ENSG00000132849 PATJ 627566 sc-eQTL 2.61e-02 0.186 0.0832 0.384 B_Memory L2
ENSG00000162604 TM2D1 644549 sc-eQTL 5.92e-01 0.0508 0.0946 0.384 B_Memory L2
ENSG00000162607 USP1 -66325 sc-eQTL 9.29e-01 0.00867 0.0974 0.384 B_Memory L2
ENSG00000088035 ALG6 -997603 sc-eQTL 3.53e-01 -0.0865 0.0929 0.385 B_Naive1 L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 6.57e-02 -0.164 0.0884 0.385 B_Naive1 L2
ENSG00000125703 ATG4C -414160 sc-eQTL 8.06e-01 -0.0168 0.0687 0.385 B_Naive1 L2
ENSG00000132849 PATJ 627566 sc-eQTL 1.03e-01 0.144 0.0877 0.385 B_Naive1 L2
ENSG00000162604 TM2D1 644549 sc-eQTL 8.44e-01 -0.016 0.0811 0.385 B_Naive1 L2
ENSG00000162607 USP1 -66325 sc-eQTL 1.54e-01 -0.114 0.0797 0.385 B_Naive1 L2
ENSG00000088035 ALG6 -997603 sc-eQTL 2.03e-01 -0.123 0.096 0.384 B_Naive2 L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 8.50e-01 -0.0175 0.0926 0.384 B_Naive2 L2
ENSG00000125703 ATG4C -414160 sc-eQTL 5.50e-01 0.0534 0.0891 0.384 B_Naive2 L2
ENSG00000132849 PATJ 627566 sc-eQTL 3.95e-01 0.0777 0.0911 0.384 B_Naive2 L2
ENSG00000162604 TM2D1 644549 sc-eQTL 9.42e-02 -0.154 0.0917 0.384 B_Naive2 L2
ENSG00000162607 USP1 -66325 sc-eQTL 4.65e-01 -0.0673 0.0919 0.384 B_Naive2 L2
ENSG00000088035 ALG6 -997603 sc-eQTL 1.73e-01 -0.133 0.0972 0.382 CD4_CTL L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 3.40e-01 -0.0815 0.0852 0.382 CD4_CTL L2
ENSG00000125703 ATG4C -414160 sc-eQTL 7.59e-01 -0.0271 0.0883 0.382 CD4_CTL L2
ENSG00000132849 PATJ 627566 sc-eQTL 1.35e-01 -0.106 0.0703 0.382 CD4_CTL L2
ENSG00000162604 TM2D1 644549 sc-eQTL 4.61e-01 -0.0666 0.0903 0.382 CD4_CTL L2
ENSG00000162607 USP1 -66325 sc-eQTL 7.89e-01 -0.0241 0.0899 0.382 CD4_CTL L2
ENSG00000088035 ALG6 -997603 sc-eQTL 3.54e-01 0.0775 0.0833 0.385 CD4_Naive L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 7.82e-02 -0.144 0.0815 0.385 CD4_Naive L2
ENSG00000125703 ATG4C -414160 sc-eQTL 1.76e-01 0.0982 0.0722 0.385 CD4_Naive L2
ENSG00000132849 PATJ 627566 sc-eQTL 6.30e-01 0.0246 0.0509 0.385 CD4_Naive L2
ENSG00000162604 TM2D1 644549 sc-eQTL 9.80e-02 0.121 0.0728 0.385 CD4_Naive L2
ENSG00000162607 USP1 -66325 sc-eQTL 9.77e-01 -0.00196 0.0677 0.385 CD4_Naive L2
ENSG00000088035 ALG6 -997603 sc-eQTL 1.46e-02 -0.225 0.0912 0.385 CD4_TCM L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 8.17e-01 -0.0189 0.082 0.385 CD4_TCM L2
ENSG00000125703 ATG4C -414160 sc-eQTL 3.34e-01 0.0771 0.0796 0.385 CD4_TCM L2
ENSG00000132849 PATJ 627566 sc-eQTL 7.94e-01 0.0168 0.0641 0.385 CD4_TCM L2
ENSG00000162604 TM2D1 644549 sc-eQTL 4.19e-01 -0.0604 0.0746 0.385 CD4_TCM L2
ENSG00000162607 USP1 -66325 sc-eQTL 6.67e-01 -0.0332 0.0771 0.385 CD4_TCM L2
ENSG00000088035 ALG6 -997603 sc-eQTL 1.44e-01 -0.138 0.094 0.385 CD4_TEM L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 9.53e-01 -0.00547 0.0921 0.385 CD4_TEM L2
ENSG00000125703 ATG4C -414160 sc-eQTL 6.67e-01 0.0385 0.0894 0.385 CD4_TEM L2
ENSG00000132849 PATJ 627566 sc-eQTL 8.56e-01 0.0151 0.0834 0.385 CD4_TEM L2
ENSG00000162604 TM2D1 644549 sc-eQTL 6.06e-01 -0.0453 0.0877 0.385 CD4_TEM L2
ENSG00000162607 USP1 -66325 sc-eQTL 8.27e-01 -0.0191 0.0874 0.385 CD4_TEM L2
ENSG00000088035 ALG6 -997603 sc-eQTL 1.28e-01 0.136 0.089 0.385 CD8_CTL L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 2.72e-02 0.187 0.0839 0.385 CD8_CTL L2
ENSG00000125703 ATG4C -414160 sc-eQTL 2.51e-01 0.104 0.0901 0.385 CD8_CTL L2
ENSG00000132849 PATJ 627566 sc-eQTL 3.21e-01 0.0849 0.0854 0.385 CD8_CTL L2
ENSG00000162604 TM2D1 644549 sc-eQTL 1.16e-01 -0.123 0.0781 0.385 CD8_CTL L2
ENSG00000162607 USP1 -66325 sc-eQTL 6.33e-01 -0.0403 0.0841 0.385 CD8_CTL L2
ENSG00000088035 ALG6 -997603 sc-eQTL 5.64e-01 -0.0514 0.0889 0.385 CD8_Naive L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 3.58e-02 -0.192 0.091 0.385 CD8_Naive L2
ENSG00000125703 ATG4C -414160 sc-eQTL 2.78e-01 0.0957 0.0881 0.385 CD8_Naive L2
ENSG00000132849 PATJ 627566 sc-eQTL 4.98e-01 0.0458 0.0675 0.385 CD8_Naive L2
ENSG00000162604 TM2D1 644549 sc-eQTL 7.10e-02 -0.149 0.0819 0.385 CD8_Naive L2
ENSG00000162607 USP1 -66325 sc-eQTL 3.58e-01 -0.0694 0.0754 0.385 CD8_Naive L2
ENSG00000088035 ALG6 -997603 sc-eQTL 2.88e-01 0.1 0.0941 0.38 CD8_TCM L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 7.06e-01 0.0348 0.0921 0.38 CD8_TCM L2
ENSG00000125703 ATG4C -414160 sc-eQTL 3.20e-01 -0.0938 0.094 0.38 CD8_TCM L2
ENSG00000132849 PATJ 627566 sc-eQTL 1.85e-01 0.115 0.0863 0.38 CD8_TCM L2
ENSG00000162604 TM2D1 644549 sc-eQTL 8.66e-01 0.0149 0.0882 0.38 CD8_TCM L2
ENSG00000162607 USP1 -66325 sc-eQTL 9.00e-01 -0.0111 0.0881 0.38 CD8_TCM L2
ENSG00000088035 ALG6 -997603 sc-eQTL 3.44e-01 0.0912 0.0962 0.377 CD8_TEM L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 7.15e-01 0.0342 0.0934 0.377 CD8_TEM L2
ENSG00000125703 ATG4C -414160 sc-eQTL 6.27e-01 0.0437 0.0898 0.377 CD8_TEM L2
ENSG00000132849 PATJ 627566 sc-eQTL 4.73e-01 0.0653 0.0908 0.377 CD8_TEM L2
ENSG00000162604 TM2D1 644549 sc-eQTL 7.10e-01 0.0345 0.0926 0.377 CD8_TEM L2
ENSG00000162607 USP1 -66325 sc-eQTL 1.50e-01 -0.133 0.0923 0.377 CD8_TEM L2
ENSG00000088035 ALG6 -997603 sc-eQTL 4.53e-01 -0.0672 0.0894 0.383 MAIT L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 3.88e-01 -0.074 0.0856 0.383 MAIT L2
ENSG00000125703 ATG4C -414160 sc-eQTL 8.20e-01 -0.0206 0.0905 0.383 MAIT L2
ENSG00000132849 PATJ 627566 sc-eQTL 5.08e-02 -0.149 0.0758 0.383 MAIT L2
ENSG00000162604 TM2D1 644549 sc-eQTL 1.94e-01 0.113 0.0867 0.383 MAIT L2
ENSG00000162607 USP1 -66325 sc-eQTL 6.46e-01 0.0413 0.0899 0.383 MAIT L2
ENSG00000088035 ALG6 -997603 sc-eQTL 7.13e-01 0.034 0.0924 0.382 NK_CD56bright L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 3.12e-01 0.0809 0.0799 0.382 NK_CD56bright L2
ENSG00000125703 ATG4C -414160 sc-eQTL 7.39e-01 -0.0298 0.0894 0.382 NK_CD56bright L2
ENSG00000132849 PATJ 627566 sc-eQTL 7.21e-01 -0.0313 0.0877 0.382 NK_CD56bright L2
ENSG00000162604 TM2D1 644549 sc-eQTL 6.19e-01 -0.0444 0.0892 0.382 NK_CD56bright L2
ENSG00000162607 USP1 -66325 sc-eQTL 4.81e-01 0.0677 0.0959 0.382 NK_CD56bright L2
ENSG00000088035 ALG6 -997603 sc-eQTL 3.43e-02 -0.194 0.0913 0.384 NK_CD56dim L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 7.36e-01 0.0271 0.0803 0.384 NK_CD56dim L2
ENSG00000125703 ATG4C -414160 sc-eQTL 3.71e-01 -0.0729 0.0814 0.384 NK_CD56dim L2
ENSG00000132849 PATJ 627566 sc-eQTL 2.49e-01 -0.102 0.0882 0.384 NK_CD56dim L2
ENSG00000162604 TM2D1 644549 sc-eQTL 9.26e-01 -0.00781 0.0839 0.384 NK_CD56dim L2
ENSG00000162607 USP1 -66325 sc-eQTL 2.47e-01 -0.104 0.0897 0.384 NK_CD56dim L2
ENSG00000088035 ALG6 -997603 sc-eQTL 7.64e-01 -0.0307 0.102 0.386 NK_HLA L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 9.78e-01 -0.00213 0.0781 0.386 NK_HLA L2
ENSG00000125703 ATG4C -414160 sc-eQTL 6.81e-01 -0.0374 0.0908 0.386 NK_HLA L2
ENSG00000132849 PATJ 627566 sc-eQTL 4.81e-01 0.0594 0.0842 0.386 NK_HLA L2
ENSG00000162604 TM2D1 644549 sc-eQTL 6.02e-01 0.05 0.0957 0.386 NK_HLA L2
ENSG00000162607 USP1 -66325 sc-eQTL 8.12e-01 -0.0238 0.0998 0.386 NK_HLA L2
ENSG00000088035 ALG6 -997603 sc-eQTL 9.38e-01 -0.00693 0.0884 0.384 NK_cytokine L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 5.43e-01 0.0499 0.0819 0.384 NK_cytokine L2
ENSG00000125703 ATG4C -414160 sc-eQTL 4.72e-01 0.0603 0.0837 0.384 NK_cytokine L2
ENSG00000132849 PATJ 627566 sc-eQTL 9.53e-01 -0.00521 0.0884 0.384 NK_cytokine L2
ENSG00000162604 TM2D1 644549 sc-eQTL 2.28e-01 0.104 0.0861 0.384 NK_cytokine L2
ENSG00000162607 USP1 -66325 sc-eQTL 5.66e-01 0.0524 0.0912 0.384 NK_cytokine L2
ENSG00000088035 ALG6 -997603 sc-eQTL 2.55e-01 0.142 0.124 0.389 PB L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 7.18e-01 -0.0482 0.133 0.389 PB L2
ENSG00000125703 ATG4C -414160 sc-eQTL 3.80e-01 0.102 0.116 0.389 PB L2
ENSG00000132849 PATJ 627566 sc-eQTL 8.59e-01 0.0215 0.121 0.389 PB L2
ENSG00000162604 TM2D1 644549 sc-eQTL 8.58e-02 -0.2 0.116 0.389 PB L2
ENSG00000162607 USP1 -66325 sc-eQTL 7.85e-01 -0.0316 0.115 0.389 PB L2
ENSG00000088035 ALG6 -997603 sc-eQTL 8.64e-01 -0.015 0.0877 0.385 Pro_T L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 7.01e-01 0.0338 0.088 0.385 Pro_T L2
ENSG00000125703 ATG4C -414160 sc-eQTL 7.09e-01 -0.0288 0.077 0.385 Pro_T L2
ENSG00000132849 PATJ 627566 sc-eQTL 4.08e-01 0.0696 0.084 0.385 Pro_T L2
ENSG00000162604 TM2D1 644549 sc-eQTL 2.04e-02 -0.217 0.093 0.385 Pro_T L2
ENSG00000162607 USP1 -66325 sc-eQTL 8.04e-01 -0.0132 0.0531 0.385 Pro_T L2
ENSG00000088035 ALG6 -997603 sc-eQTL 7.25e-01 0.0337 0.0959 0.385 Treg L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 1.45e-01 0.128 0.0876 0.385 Treg L2
ENSG00000125703 ATG4C -414160 sc-eQTL 5.84e-01 0.0493 0.0899 0.385 Treg L2
ENSG00000132849 PATJ 627566 sc-eQTL 8.81e-01 0.0125 0.0834 0.385 Treg L2
ENSG00000162604 TM2D1 644549 sc-eQTL 1.38e-01 0.136 0.0914 0.385 Treg L2
ENSG00000162607 USP1 -66325 sc-eQTL 9.98e-01 -0.000207 0.0911 0.385 Treg L2
ENSG00000088035 ALG6 -997603 sc-eQTL 7.79e-01 0.0255 0.0907 0.395 cDC L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 2.35e-01 0.106 0.0887 0.395 cDC L2
ENSG00000125703 ATG4C -414160 sc-eQTL 6.92e-01 0.0307 0.0773 0.395 cDC L2
ENSG00000162604 TM2D1 644549 sc-eQTL 4.68e-01 0.0702 0.0965 0.395 cDC L2
ENSG00000162607 USP1 -66325 sc-eQTL 4.14e-01 -0.0713 0.0871 0.395 cDC L2
ENSG00000088035 ALG6 -997603 sc-eQTL 9.28e-01 -0.00775 0.0858 0.385 cMono_IL1B L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 4.98e-01 -0.0614 0.0904 0.385 cMono_IL1B L2
ENSG00000125703 ATG4C -414160 sc-eQTL 5.98e-01 0.0336 0.0636 0.385 cMono_IL1B L2
ENSG00000162604 TM2D1 644549 sc-eQTL 9.61e-01 0.00323 0.0657 0.385 cMono_IL1B L2
ENSG00000162607 USP1 -66325 sc-eQTL 4.44e-01 -0.0608 0.0794 0.385 cMono_IL1B L2
ENSG00000240563 L1TD1 175123 sc-eQTL 4.83e-01 -0.056 0.0798 0.385 cMono_IL1B L2
ENSG00000088035 ALG6 -997603 sc-eQTL 4.65e-01 -0.0702 0.096 0.385 cMono_S100A L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 3.29e-01 -0.0869 0.0889 0.385 cMono_S100A L2
ENSG00000125703 ATG4C -414160 sc-eQTL 5.78e-01 0.043 0.0771 0.385 cMono_S100A L2
ENSG00000162604 TM2D1 644549 sc-eQTL 2.14e-01 -0.0979 0.0785 0.385 cMono_S100A L2
ENSG00000162607 USP1 -66325 sc-eQTL 2.35e-01 0.106 0.0893 0.385 cMono_S100A L2
ENSG00000240563 L1TD1 175123 sc-eQTL 7.19e-01 0.0268 0.0745 0.385 cMono_S100A L2
ENSG00000088035 ALG6 -997603 sc-eQTL 1.62e-01 -0.154 0.11 0.382 gdT L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 2.91e-01 -0.114 0.108 0.382 gdT L2
ENSG00000125703 ATG4C -414160 sc-eQTL 7.16e-01 0.0377 0.103 0.382 gdT L2
ENSG00000132849 PATJ 627566 sc-eQTL 9.28e-01 0.00917 0.101 0.382 gdT L2
ENSG00000162604 TM2D1 644549 sc-eQTL 6.94e-01 0.0418 0.106 0.382 gdT L2
ENSG00000162607 USP1 -66325 sc-eQTL 9.04e-01 -0.0125 0.104 0.382 gdT L2
ENSG00000088035 ALG6 -997603 sc-eQTL 2.55e-01 0.0997 0.0874 0.396 intMono L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 9.11e-01 0.01 0.0896 0.396 intMono L2
ENSG00000125703 ATG4C -414160 sc-eQTL 6.72e-01 -0.0362 0.0855 0.396 intMono L2
ENSG00000162604 TM2D1 644549 sc-eQTL 4.76e-01 0.0646 0.0904 0.396 intMono L2
ENSG00000162607 USP1 -66325 sc-eQTL 3.44e-01 -0.0906 0.0956 0.396 intMono L2
ENSG00000240563 L1TD1 175123 sc-eQTL 7.13e-01 0.0259 0.0704 0.396 intMono L2
ENSG00000088035 ALG6 -997603 sc-eQTL 5.28e-01 0.0589 0.0933 0.391 ncMono L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 3.02e-01 0.0948 0.0916 0.391 ncMono L2
ENSG00000125703 ATG4C -414160 sc-eQTL 3.07e-01 -0.0876 0.0856 0.391 ncMono L2
ENSG00000162604 TM2D1 644549 sc-eQTL 7.06e-01 0.0349 0.0925 0.391 ncMono L2
ENSG00000162607 USP1 -66325 sc-eQTL 1.25e-01 -0.141 0.0912 0.391 ncMono L2
ENSG00000240563 L1TD1 175123 sc-eQTL 4.40e-01 -0.0502 0.065 0.391 ncMono L2
ENSG00000088035 ALG6 -997603 sc-eQTL 5.33e-02 -0.187 0.0958 0.393 pDC L2
ENSG00000116641 DOCK7 -318414 sc-eQTL 6.26e-01 0.0484 0.099 0.393 pDC L2
ENSG00000125703 ATG4C -414160 sc-eQTL 5.90e-01 -0.0479 0.0888 0.393 pDC L2
ENSG00000162604 TM2D1 644549 sc-eQTL 7.94e-01 0.0227 0.087 0.393 pDC L2
ENSG00000162607 USP1 -66325 sc-eQTL 9.29e-01 -0.00908 0.102 0.393 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000088035 ALG6 -997603 sc-eQTL 7.25e-01 -0.0341 0.0968 0.385 B_Memory LOneK1K
ENSG00000116641 DOCK7 -318414 sc-eQTL 9.17e-01 0.00877 0.084 0.385 B_Memory LOneK1K
ENSG00000125703 ATG4C -414160 sc-eQTL 2.90e-01 -0.0719 0.0678 0.385 B_Memory LOneK1K
ENSG00000132849 PATJ 627566 sc-eQTL 1.24e-01 0.115 0.0748 0.385 B_Memory LOneK1K
ENSG00000162604 TM2D1 644549 sc-eQTL 4.64e-01 0.0626 0.0853 0.385 B_Memory LOneK1K
ENSG00000162607 USP1 -66325 sc-eQTL 7.99e-01 -0.0221 0.0867 0.385 B_Memory LOneK1K
ENSG00000088035 ALG6 -997603 sc-eQTL 1.62e-01 -0.132 0.0937 0.385 B_Naive LOneK1K
ENSG00000116641 DOCK7 -318414 sc-eQTL 8.28e-02 -0.152 0.0873 0.385 B_Naive LOneK1K
ENSG00000125703 ATG4C -414160 sc-eQTL 3.55e-01 0.062 0.067 0.385 B_Naive LOneK1K
ENSG00000132849 PATJ 627566 sc-eQTL 2.00e-01 0.103 0.0799 0.385 B_Naive LOneK1K
ENSG00000162604 TM2D1 644549 sc-eQTL 6.31e-01 -0.0368 0.0765 0.385 B_Naive LOneK1K
ENSG00000162607 USP1 -66325 sc-eQTL 1.75e-01 -0.11 0.0811 0.385 B_Naive LOneK1K
ENSG00000088035 ALG6 -997603 sc-eQTL 5.42e-01 -0.0521 0.0852 0.385 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -318414 sc-eQTL 4.84e-01 -0.0601 0.0858 0.385 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -414160 sc-eQTL 3.30e-01 0.0579 0.0592 0.385 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 644549 sc-eQTL 4.02e-01 -0.0519 0.0618 0.385 CD14_Mono LOneK1K
ENSG00000162607 USP1 -66325 sc-eQTL 8.41e-01 0.0151 0.075 0.385 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 175123 sc-eQTL 6.61e-01 -0.0357 0.0813 0.385 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -997603 sc-eQTL 6.89e-01 0.0382 0.0952 0.388 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -318414 sc-eQTL 2.16e-01 0.117 0.0939 0.388 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -414160 sc-eQTL 1.86e-01 -0.106 0.08 0.388 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 644549 sc-eQTL 4.46e-01 0.0716 0.0938 0.388 CD16_Mono LOneK1K
ENSG00000162607 USP1 -66325 sc-eQTL 1.61e-01 -0.123 0.0873 0.388 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 175123 sc-eQTL 5.96e-01 -0.0318 0.0598 0.388 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -997603 sc-eQTL 2.06e-01 -0.107 0.0847 0.384 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 -318414 sc-eQTL 5.75e-01 0.0427 0.0761 0.384 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -414160 sc-eQTL 5.01e-01 -0.0512 0.0759 0.384 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 627566 sc-eQTL 2.52e-01 -0.0939 0.0817 0.384 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 644549 sc-eQTL 8.65e-01 -0.0128 0.0751 0.384 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -66325 sc-eQTL 3.79e-01 -0.072 0.0816 0.384 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 -318396 eQTL 0.494 -0.017 0.0249 0.0242 0.00364 0.374
ENSG00000240563 L1TD1 175123 eQTL 0.0456 -0.0867 0.0433 0.0 0.0 0.374

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162607 \N -66325 7.68e-06 9.28e-06 1.35e-06 4.36e-06 2.06e-06 3.71e-06 9.38e-06 1.51e-06 5.94e-06 4.42e-06 1.01e-05 4.49e-06 1.18e-05 3.9e-06 1.86e-06 5.69e-06 3.8e-06 5e-06 2.56e-06 2.62e-06 4.24e-06 7.44e-06 6.85e-06 3.08e-06 1.22e-05 2.8e-06 4.04e-06 2.84e-06 8.01e-06 7.92e-06 4.3e-06 7.64e-07 9.52e-07 3.06e-06 3.16e-06 2.06e-06 1.63e-06 1.46e-06 1.59e-06 1.02e-06 1.02e-06 1e-05 9.02e-07 1.54e-07 7.38e-07 1.44e-06 9.55e-07 7.28e-07 5.97e-07