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Genes within 1Mb (chr1:61817402:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.93e-02 -0.136 0.082 0.327 B L1
ENSG00000125703 ATG4C -966730 sc-eQTL 6.63e-01 0.025 0.0573 0.327 B L1
ENSG00000132849 PATJ 74996 sc-eQTL 3.52e-01 -0.0648 0.0695 0.327 B L1
ENSG00000162604 TM2D1 91979 sc-eQTL 9.88e-01 -0.00101 0.0695 0.327 B L1
ENSG00000162607 USP1 -618895 sc-eQTL 5.43e-01 -0.0483 0.0792 0.327 B L1
ENSG00000116641 DOCK7 -870984 sc-eQTL 4.49e-01 -0.058 0.0765 0.327 CD4T L1
ENSG00000125703 ATG4C -966730 sc-eQTL 6.42e-02 -0.114 0.0613 0.327 CD4T L1
ENSG00000132849 PATJ 74996 sc-eQTL 6.14e-01 0.0253 0.0501 0.327 CD4T L1
ENSG00000162599 NFIA 952143 sc-eQTL 5.49e-01 0.0458 0.0764 0.327 CD4T L1
ENSG00000162604 TM2D1 91979 sc-eQTL 9.70e-01 0.00231 0.061 0.327 CD4T L1
ENSG00000162607 USP1 -618895 sc-eQTL 3.95e-01 0.0511 0.0599 0.327 CD4T L1
ENSG00000116641 DOCK7 -870984 sc-eQTL 1.59e-01 -0.119 0.0838 0.327 CD8T L1
ENSG00000125703 ATG4C -966730 sc-eQTL 7.19e-01 0.0288 0.08 0.327 CD8T L1
ENSG00000132849 PATJ 74996 sc-eQTL 3.44e-01 0.0462 0.0487 0.327 CD8T L1
ENSG00000162599 NFIA 952143 sc-eQTL 6.17e-01 0.0388 0.0776 0.327 CD8T L1
ENSG00000162604 TM2D1 91979 sc-eQTL 6.11e-01 0.0373 0.0732 0.327 CD8T L1
ENSG00000162607 USP1 -618895 sc-eQTL 6.78e-01 -0.029 0.0697 0.327 CD8T L1
ENSG00000116641 DOCK7 -870984 sc-eQTL 1.91e-01 -0.115 0.0876 0.324 DC L1
ENSG00000125703 ATG4C -966730 sc-eQTL 2.33e-01 -0.0821 0.0686 0.324 DC L1
ENSG00000162599 NFIA 952143 sc-eQTL 7.22e-01 0.0274 0.0771 0.324 DC L1
ENSG00000162604 TM2D1 91979 sc-eQTL 1.94e-01 -0.104 0.0799 0.324 DC L1
ENSG00000162607 USP1 -618895 sc-eQTL 1.09e-01 -0.134 0.0835 0.324 DC L1
ENSG00000116641 DOCK7 -870984 sc-eQTL 6.71e-01 0.0352 0.0826 0.327 Mono L1
ENSG00000125703 ATG4C -966730 sc-eQTL 1.11e-01 -0.0889 0.0555 0.327 Mono L1
ENSG00000162599 NFIA 952143 sc-eQTL 9.12e-01 -0.00616 0.0556 0.327 Mono L1
ENSG00000162604 TM2D1 91979 sc-eQTL 7.51e-01 -0.0197 0.0619 0.327 Mono L1
ENSG00000162607 USP1 -618895 sc-eQTL 1.72e-01 -0.0988 0.0721 0.327 Mono L1
ENSG00000240563 L1TD1 -377447 sc-eQTL 5.06e-01 -0.045 0.0675 0.327 Mono L1
ENSG00000116641 DOCK7 -870984 sc-eQTL 1.12e-01 -0.107 0.067 0.328 NK L1
ENSG00000125703 ATG4C -966730 sc-eQTL 5.83e-01 -0.0397 0.0723 0.328 NK L1
ENSG00000132849 PATJ 74996 sc-eQTL 1.95e-01 0.0919 0.0706 0.328 NK L1
ENSG00000162599 NFIA 952143 sc-eQTL 9.98e-01 -0.000209 0.0825 0.328 NK L1
ENSG00000162604 TM2D1 91979 sc-eQTL 5.89e-02 -0.137 0.072 0.328 NK L1
ENSG00000162607 USP1 -618895 sc-eQTL 2.35e-02 -0.181 0.0794 0.328 NK L1
ENSG00000116641 DOCK7 -870984 sc-eQTL 1.26e-01 -0.126 0.0818 0.327 Other_T L1
ENSG00000125703 ATG4C -966730 sc-eQTL 3.19e-01 0.0709 0.0711 0.327 Other_T L1
ENSG00000132849 PATJ 74996 sc-eQTL 4.38e-01 0.0515 0.0662 0.327 Other_T L1
ENSG00000162599 NFIA 952143 sc-eQTL 2.30e-01 -0.104 0.0864 0.327 Other_T L1
ENSG00000162604 TM2D1 91979 sc-eQTL 3.57e-01 0.0716 0.0776 0.327 Other_T L1
ENSG00000162607 USP1 -618895 sc-eQTL 9.93e-01 0.000481 0.0547 0.327 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116641 DOCK7 -870984 sc-eQTL 6.46e-01 -0.0442 0.0959 0.306 B_Activated L2
ENSG00000125703 ATG4C -966730 sc-eQTL 6.30e-01 0.0487 0.101 0.306 B_Activated L2
ENSG00000132849 PATJ 74996 sc-eQTL 5.07e-01 -0.057 0.0857 0.306 B_Activated L2
ENSG00000162604 TM2D1 91979 sc-eQTL 6.07e-02 -0.204 0.108 0.306 B_Activated L2
ENSG00000162607 USP1 -618895 sc-eQTL 7.86e-01 -0.029 0.107 0.306 B_Activated L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 1.73e-01 0.125 0.0916 0.326 B_Intermediate L2
ENSG00000125703 ATG4C -966730 sc-eQTL 6.14e-01 -0.0393 0.0779 0.326 B_Intermediate L2
ENSG00000132849 PATJ 74996 sc-eQTL 4.71e-01 -0.0609 0.0843 0.326 B_Intermediate L2
ENSG00000162604 TM2D1 91979 sc-eQTL 7.62e-01 0.0268 0.0885 0.326 B_Intermediate L2
ENSG00000162607 USP1 -618895 sc-eQTL 9.47e-01 0.00619 0.0927 0.326 B_Intermediate L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.55e-01 -0.00498 0.0879 0.328 B_Memory L2
ENSG00000125703 ATG4C -966730 sc-eQTL 9.00e-01 0.0105 0.0835 0.328 B_Memory L2
ENSG00000132849 PATJ 74996 sc-eQTL 3.47e-01 -0.0785 0.0832 0.328 B_Memory L2
ENSG00000162604 TM2D1 91979 sc-eQTL 5.82e-01 0.0516 0.0937 0.328 B_Memory L2
ENSG00000162607 USP1 -618895 sc-eQTL 8.62e-01 -0.0168 0.0964 0.328 B_Memory L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 2.25e-02 -0.206 0.0898 0.327 B_Naive1 L2
ENSG00000125703 ATG4C -966730 sc-eQTL 5.18e-01 -0.0452 0.0699 0.327 B_Naive1 L2
ENSG00000132849 PATJ 74996 sc-eQTL 3.97e-01 -0.0762 0.0898 0.327 B_Naive1 L2
ENSG00000162604 TM2D1 91979 sc-eQTL 7.37e-01 -0.0278 0.0827 0.327 B_Naive1 L2
ENSG00000162607 USP1 -618895 sc-eQTL 4.14e-01 0.0668 0.0815 0.327 B_Naive1 L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 7.96e-01 -0.0242 0.0934 0.328 B_Naive2 L2
ENSG00000125703 ATG4C -966730 sc-eQTL 1.78e-01 0.121 0.0895 0.328 B_Naive2 L2
ENSG00000132849 PATJ 74996 sc-eQTL 3.61e-01 0.0841 0.0918 0.328 B_Naive2 L2
ENSG00000162604 TM2D1 91979 sc-eQTL 7.56e-01 0.029 0.0931 0.328 B_Naive2 L2
ENSG00000162607 USP1 -618895 sc-eQTL 1.90e-01 -0.122 0.0925 0.328 B_Naive2 L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 4.14e-01 -0.0719 0.0879 0.325 CD4_CTL L2
ENSG00000125703 ATG4C -966730 sc-eQTL 6.59e-01 -0.0403 0.0911 0.325 CD4_CTL L2
ENSG00000132849 PATJ 74996 sc-eQTL 2.41e-01 0.0855 0.0727 0.325 CD4_CTL L2
ENSG00000162599 NFIA 952143 sc-eQTL 9.46e-01 0.00598 0.0887 0.325 CD4_CTL L2
ENSG00000162604 TM2D1 91979 sc-eQTL 2.00e-01 0.12 0.0929 0.325 CD4_CTL L2
ENSG00000162607 USP1 -618895 sc-eQTL 7.46e-01 -0.0301 0.0927 0.325 CD4_CTL L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 1.07e-01 -0.131 0.0809 0.327 CD4_Naive L2
ENSG00000125703 ATG4C -966730 sc-eQTL 1.14e-01 -0.114 0.0716 0.327 CD4_Naive L2
ENSG00000132849 PATJ 74996 sc-eQTL 7.10e-01 0.0188 0.0505 0.327 CD4_Naive L2
ENSG00000162599 NFIA 952143 sc-eQTL 3.40e-01 0.0757 0.0792 0.327 CD4_Naive L2
ENSG00000162604 TM2D1 91979 sc-eQTL 8.33e-01 0.0153 0.0727 0.327 CD4_Naive L2
ENSG00000162607 USP1 -618895 sc-eQTL 1.76e-01 0.0908 0.0669 0.327 CD4_Naive L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 8.50e-01 -0.0155 0.0817 0.327 CD4_TCM L2
ENSG00000125703 ATG4C -966730 sc-eQTL 2.89e-01 -0.0843 0.0793 0.327 CD4_TCM L2
ENSG00000132849 PATJ 74996 sc-eQTL 5.85e-01 0.0349 0.0638 0.327 CD4_TCM L2
ENSG00000162599 NFIA 952143 sc-eQTL 4.27e-01 -0.0682 0.0857 0.327 CD4_TCM L2
ENSG00000162604 TM2D1 91979 sc-eQTL 8.72e-01 -0.0121 0.0744 0.327 CD4_TCM L2
ENSG00000162607 USP1 -618895 sc-eQTL 7.84e-01 -0.0211 0.0769 0.327 CD4_TCM L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 7.07e-01 0.0346 0.0919 0.327 CD4_TEM L2
ENSG00000125703 ATG4C -966730 sc-eQTL 7.20e-01 -0.0321 0.0892 0.327 CD4_TEM L2
ENSG00000132849 PATJ 74996 sc-eQTL 3.94e-01 -0.0709 0.0831 0.327 CD4_TEM L2
ENSG00000162599 NFIA 952143 sc-eQTL 2.32e-01 0.111 0.0924 0.327 CD4_TEM L2
ENSG00000162604 TM2D1 91979 sc-eQTL 6.66e-01 -0.0378 0.0875 0.327 CD4_TEM L2
ENSG00000162607 USP1 -618895 sc-eQTL 3.81e-01 0.0764 0.0871 0.327 CD4_TEM L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 7.91e-01 -0.0228 0.0858 0.327 CD8_CTL L2
ENSG00000125703 ATG4C -966730 sc-eQTL 2.32e-01 -0.109 0.091 0.327 CD8_CTL L2
ENSG00000132849 PATJ 74996 sc-eQTL 6.68e-01 0.0372 0.0865 0.327 CD8_CTL L2
ENSG00000162599 NFIA 952143 sc-eQTL 6.25e-01 0.0447 0.0914 0.327 CD8_CTL L2
ENSG00000162604 TM2D1 91979 sc-eQTL 8.38e-01 0.0162 0.0794 0.327 CD8_CTL L2
ENSG00000162607 USP1 -618895 sc-eQTL 9.73e-01 -0.00293 0.0851 0.327 CD8_CTL L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 8.56e-01 -0.0167 0.0916 0.327 CD8_Naive L2
ENSG00000125703 ATG4C -966730 sc-eQTL 4.40e-01 0.068 0.0878 0.327 CD8_Naive L2
ENSG00000132849 PATJ 74996 sc-eQTL 1.58e-01 0.0949 0.0669 0.327 CD8_Naive L2
ENSG00000162599 NFIA 952143 sc-eQTL 7.11e-01 -0.0325 0.0877 0.327 CD8_Naive L2
ENSG00000162604 TM2D1 91979 sc-eQTL 9.40e-01 0.00615 0.0821 0.327 CD8_Naive L2
ENSG00000162607 USP1 -618895 sc-eQTL 5.04e-01 0.0503 0.0752 0.327 CD8_Naive L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 3.80e-01 -0.0824 0.0936 0.324 CD8_TCM L2
ENSG00000125703 ATG4C -966730 sc-eQTL 5.71e-01 0.0545 0.0959 0.324 CD8_TCM L2
ENSG00000132849 PATJ 74996 sc-eQTL 7.46e-01 0.0286 0.0883 0.324 CD8_TCM L2
ENSG00000162599 NFIA 952143 sc-eQTL 4.29e-01 -0.0752 0.0949 0.324 CD8_TCM L2
ENSG00000162604 TM2D1 91979 sc-eQTL 3.22e-01 -0.089 0.0896 0.324 CD8_TCM L2
ENSG00000162607 USP1 -618895 sc-eQTL 2.61e-01 -0.101 0.0895 0.324 CD8_TCM L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 5.71e-02 -0.176 0.0922 0.329 CD8_TEM L2
ENSG00000125703 ATG4C -966730 sc-eQTL 3.75e-01 -0.0794 0.0893 0.329 CD8_TEM L2
ENSG00000132849 PATJ 74996 sc-eQTL 5.91e-01 -0.0488 0.0905 0.329 CD8_TEM L2
ENSG00000162599 NFIA 952143 sc-eQTL 9.82e-01 -0.00213 0.0938 0.329 CD8_TEM L2
ENSG00000162604 TM2D1 91979 sc-eQTL 4.05e-01 0.0768 0.0921 0.329 CD8_TEM L2
ENSG00000162607 USP1 -618895 sc-eQTL 8.14e-01 -0.0218 0.0924 0.329 CD8_TEM L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 3.11e-01 -0.0862 0.0848 0.327 MAIT L2
ENSG00000125703 ATG4C -966730 sc-eQTL 1.92e-01 0.117 0.0893 0.327 MAIT L2
ENSG00000132849 PATJ 74996 sc-eQTL 5.79e-01 -0.0421 0.0758 0.327 MAIT L2
ENSG00000162599 NFIA 952143 sc-eQTL 4.37e-01 -0.0678 0.0871 0.327 MAIT L2
ENSG00000162604 TM2D1 91979 sc-eQTL 7.47e-01 0.0279 0.0862 0.327 MAIT L2
ENSG00000162607 USP1 -618895 sc-eQTL 2.62e-01 0.1 0.0888 0.327 MAIT L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 5.54e-02 -0.156 0.0809 0.322 NK_CD56bright L2
ENSG00000125703 ATG4C -966730 sc-eQTL 5.36e-02 -0.175 0.0903 0.322 NK_CD56bright L2
ENSG00000132849 PATJ 74996 sc-eQTL 4.61e-01 0.0658 0.0892 0.322 NK_CD56bright L2
ENSG00000162599 NFIA 952143 sc-eQTL 6.84e-01 -0.0363 0.0891 0.322 NK_CD56bright L2
ENSG00000162604 TM2D1 91979 sc-eQTL 2.51e-01 -0.104 0.0906 0.322 NK_CD56bright L2
ENSG00000162607 USP1 -618895 sc-eQTL 8.71e-01 -0.0159 0.0979 0.322 NK_CD56bright L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 2.99e-01 -0.0833 0.0801 0.325 NK_CD56dim L2
ENSG00000125703 ATG4C -966730 sc-eQTL 1.27e-01 0.124 0.0811 0.325 NK_CD56dim L2
ENSG00000132849 PATJ 74996 sc-eQTL 2.84e-01 0.0947 0.0882 0.325 NK_CD56dim L2
ENSG00000162599 NFIA 952143 sc-eQTL 7.84e-01 -0.0244 0.089 0.325 NK_CD56dim L2
ENSG00000162604 TM2D1 91979 sc-eQTL 2.57e-01 -0.0953 0.0837 0.325 NK_CD56dim L2
ENSG00000162607 USP1 -618895 sc-eQTL 1.14e-01 -0.142 0.0895 0.325 NK_CD56dim L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 1.89e-01 0.103 0.0781 0.329 NK_HLA L2
ENSG00000125703 ATG4C -966730 sc-eQTL 9.56e-01 0.00506 0.0913 0.329 NK_HLA L2
ENSG00000132849 PATJ 74996 sc-eQTL 1.09e-01 0.136 0.0842 0.329 NK_HLA L2
ENSG00000162599 NFIA 952143 sc-eQTL 6.34e-01 0.0428 0.0899 0.329 NK_HLA L2
ENSG00000162604 TM2D1 91979 sc-eQTL 9.71e-01 -0.00348 0.0963 0.329 NK_HLA L2
ENSG00000162607 USP1 -618895 sc-eQTL 5.01e-01 -0.0676 0.1 0.329 NK_HLA L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.26e-01 0.00785 0.0841 0.325 NK_cytokine L2
ENSG00000125703 ATG4C -966730 sc-eQTL 5.65e-01 -0.0496 0.086 0.325 NK_cytokine L2
ENSG00000132849 PATJ 74996 sc-eQTL 9.09e-01 0.0104 0.0908 0.325 NK_cytokine L2
ENSG00000162599 NFIA 952143 sc-eQTL 6.96e-01 -0.0348 0.0891 0.325 NK_cytokine L2
ENSG00000162604 TM2D1 91979 sc-eQTL 4.56e-01 -0.0663 0.0887 0.325 NK_cytokine L2
ENSG00000162607 USP1 -618895 sc-eQTL 4.13e-01 -0.0768 0.0936 0.325 NK_cytokine L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 5.38e-03 -0.372 0.131 0.344 PB L2
ENSG00000125703 ATG4C -966730 sc-eQTL 8.41e-02 0.203 0.117 0.344 PB L2
ENSG00000132849 PATJ 74996 sc-eQTL 7.96e-01 -0.0318 0.123 0.344 PB L2
ENSG00000162604 TM2D1 91979 sc-eQTL 7.45e-01 0.0388 0.119 0.344 PB L2
ENSG00000162607 USP1 -618895 sc-eQTL 1.45e-01 -0.171 0.116 0.344 PB L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 2.23e-01 -0.109 0.0888 0.317 Pro_T L2
ENSG00000125703 ATG4C -966730 sc-eQTL 5.45e-02 -0.15 0.0773 0.317 Pro_T L2
ENSG00000132849 PATJ 74996 sc-eQTL 7.17e-01 0.0309 0.0851 0.317 Pro_T L2
ENSG00000162599 NFIA 952143 sc-eQTL 5.75e-02 -0.163 0.0855 0.317 Pro_T L2
ENSG00000162604 TM2D1 91979 sc-eQTL 8.96e-01 0.0125 0.0954 0.317 Pro_T L2
ENSG00000162607 USP1 -618895 sc-eQTL 7.79e-01 0.0151 0.0538 0.317 Pro_T L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.33e-01 -0.0075 0.0891 0.327 Treg L2
ENSG00000125703 ATG4C -966730 sc-eQTL 6.47e-01 0.0418 0.091 0.327 Treg L2
ENSG00000132849 PATJ 74996 sc-eQTL 1.92e-01 -0.11 0.084 0.327 Treg L2
ENSG00000162599 NFIA 952143 sc-eQTL 1.61e-01 -0.125 0.0892 0.327 Treg L2
ENSG00000162604 TM2D1 91979 sc-eQTL 3.59e-01 -0.0853 0.0927 0.327 Treg L2
ENSG00000162607 USP1 -618895 sc-eQTL 1.31e-01 -0.139 0.0917 0.327 Treg L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 4.47e-02 -0.177 0.0877 0.327 cDC L2
ENSG00000125703 ATG4C -966730 sc-eQTL 1.27e-01 -0.117 0.0765 0.327 cDC L2
ENSG00000162599 NFIA 952143 sc-eQTL 6.90e-01 0.0327 0.0816 0.327 cDC L2
ENSG00000162604 TM2D1 91979 sc-eQTL 1.99e-01 -0.123 0.0958 0.327 cDC L2
ENSG00000162607 USP1 -618895 sc-eQTL 7.24e-01 0.0307 0.0869 0.327 cDC L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.80e-01 -0.00223 0.0896 0.327 cMono_IL1B L2
ENSG00000125703 ATG4C -966730 sc-eQTL 1.45e-01 -0.0916 0.0627 0.327 cMono_IL1B L2
ENSG00000162599 NFIA 952143 sc-eQTL 2.79e-01 -0.0638 0.0587 0.327 cMono_IL1B L2
ENSG00000162604 TM2D1 91979 sc-eQTL 7.38e-01 -0.0217 0.065 0.327 cMono_IL1B L2
ENSG00000162607 USP1 -618895 sc-eQTL 1.51e-01 -0.113 0.0783 0.327 cMono_IL1B L2
ENSG00000240563 L1TD1 -377447 sc-eQTL 3.29e-01 -0.0773 0.0789 0.327 cMono_IL1B L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 6.95e-01 -0.0344 0.0877 0.327 cMono_S100A L2
ENSG00000125703 ATG4C -966730 sc-eQTL 1.42e-01 -0.111 0.0756 0.327 cMono_S100A L2
ENSG00000162599 NFIA 952143 sc-eQTL 5.44e-01 -0.0394 0.0647 0.327 cMono_S100A L2
ENSG00000162604 TM2D1 91979 sc-eQTL 8.47e-01 0.015 0.0775 0.327 cMono_S100A L2
ENSG00000162607 USP1 -618895 sc-eQTL 6.05e-01 -0.0456 0.0881 0.327 cMono_S100A L2
ENSG00000240563 L1TD1 -377447 sc-eQTL 4.16e-01 -0.0596 0.0733 0.327 cMono_S100A L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 4.56e-01 -0.0808 0.108 0.315 gdT L2
ENSG00000125703 ATG4C -966730 sc-eQTL 2.11e-02 0.237 0.102 0.315 gdT L2
ENSG00000132849 PATJ 74996 sc-eQTL 5.01e-01 0.0682 0.101 0.315 gdT L2
ENSG00000162599 NFIA 952143 sc-eQTL 6.17e-01 0.0519 0.103 0.315 gdT L2
ENSG00000162604 TM2D1 91979 sc-eQTL 3.11e-01 0.108 0.106 0.315 gdT L2
ENSG00000162607 USP1 -618895 sc-eQTL 9.66e-01 -0.00439 0.104 0.315 gdT L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.54e-01 -0.00517 0.0891 0.336 intMono L2
ENSG00000125703 ATG4C -966730 sc-eQTL 8.21e-01 -0.0193 0.085 0.336 intMono L2
ENSG00000162599 NFIA 952143 sc-eQTL 1.55e-01 0.115 0.0809 0.336 intMono L2
ENSG00000162604 TM2D1 91979 sc-eQTL 2.65e-01 -0.1 0.0897 0.336 intMono L2
ENSG00000162607 USP1 -618895 sc-eQTL 6.18e-01 -0.0475 0.0952 0.336 intMono L2
ENSG00000240563 L1TD1 -377447 sc-eQTL 1.03e-01 0.114 0.0696 0.336 intMono L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 4.03e-01 0.0783 0.0934 0.33 ncMono L2
ENSG00000125703 ATG4C -966730 sc-eQTL 7.71e-01 0.0255 0.0874 0.33 ncMono L2
ENSG00000162599 NFIA 952143 sc-eQTL 2.68e-01 0.103 0.0927 0.33 ncMono L2
ENSG00000162604 TM2D1 91979 sc-eQTL 4.30e-01 -0.0744 0.0941 0.33 ncMono L2
ENSG00000162607 USP1 -618895 sc-eQTL 3.03e-01 -0.0961 0.0932 0.33 ncMono L2
ENSG00000240563 L1TD1 -377447 sc-eQTL 4.36e-01 -0.0516 0.0662 0.33 ncMono L2
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.40e-01 0.00762 0.101 0.336 pDC L2
ENSG00000125703 ATG4C -966730 sc-eQTL 7.35e-01 -0.0309 0.0909 0.336 pDC L2
ENSG00000162599 NFIA 952143 sc-eQTL 4.92e-01 -0.0603 0.0876 0.336 pDC L2
ENSG00000162604 TM2D1 91979 sc-eQTL 5.94e-01 -0.0476 0.089 0.336 pDC L2
ENSG00000162607 USP1 -618895 sc-eQTL 5.75e-02 -0.197 0.103 0.336 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116641 DOCK7 -870984 sc-eQTL 3.19e-01 0.0845 0.0847 0.327 B_Memory LOneK1K
ENSG00000125703 ATG4C -966730 sc-eQTL 9.25e-01 0.00646 0.0686 0.327 B_Memory LOneK1K
ENSG00000132849 PATJ 74996 sc-eQTL 2.03e-01 -0.0967 0.0757 0.327 B_Memory LOneK1K
ENSG00000162604 TM2D1 91979 sc-eQTL 7.09e-01 0.0323 0.0863 0.327 B_Memory LOneK1K
ENSG00000162607 USP1 -618895 sc-eQTL 7.71e-01 -0.0255 0.0875 0.327 B_Memory LOneK1K
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.35e-02 -0.149 0.0883 0.327 B_Naive LOneK1K
ENSG00000125703 ATG4C -966730 sc-eQTL 8.08e-01 0.0165 0.0678 0.327 B_Naive LOneK1K
ENSG00000132849 PATJ 74996 sc-eQTL 8.84e-01 0.0119 0.0811 0.327 B_Naive LOneK1K
ENSG00000162604 TM2D1 91979 sc-eQTL 8.29e-01 -0.0168 0.0774 0.327 B_Naive LOneK1K
ENSG00000162607 USP1 -618895 sc-eQTL 7.17e-01 -0.0299 0.0824 0.327 B_Naive LOneK1K
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.26e-01 0.00787 0.0846 0.327 CD14_Mono LOneK1K
ENSG00000125703 ATG4C -966730 sc-eQTL 6.86e-02 -0.106 0.058 0.327 CD14_Mono LOneK1K
ENSG00000162599 NFIA 952143 sc-eQTL 5.89e-01 -0.0302 0.0559 0.327 CD14_Mono LOneK1K
ENSG00000162604 TM2D1 91979 sc-eQTL 9.68e-01 0.00248 0.061 0.327 CD14_Mono LOneK1K
ENSG00000162607 USP1 -618895 sc-eQTL 1.52e-01 -0.106 0.0736 0.327 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 -377447 sc-eQTL 3.91e-01 -0.0688 0.08 0.327 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 -870984 sc-eQTL 6.22e-01 0.0461 0.0933 0.328 CD16_Mono LOneK1K
ENSG00000125703 ATG4C -966730 sc-eQTL 9.84e-01 -0.00164 0.0796 0.328 CD16_Mono LOneK1K
ENSG00000162599 NFIA 952143 sc-eQTL 2.07e-01 0.0991 0.0783 0.328 CD16_Mono LOneK1K
ENSG00000162604 TM2D1 91979 sc-eQTL 5.31e-01 -0.0584 0.093 0.328 CD16_Mono LOneK1K
ENSG00000162607 USP1 -618895 sc-eQTL 3.43e-01 -0.0824 0.0867 0.328 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 -377447 sc-eQTL 6.93e-01 -0.0234 0.0592 0.328 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 -870984 sc-eQTL 9.31e-01 -0.00657 0.0762 0.325 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C -966730 sc-eQTL 9.39e-01 -0.00582 0.0761 0.325 NK_CD56dim LOneK1K
ENSG00000132849 PATJ 74996 sc-eQTL 4.50e-01 0.062 0.0819 0.325 NK_CD56dim LOneK1K
ENSG00000162599 NFIA 952143 sc-eQTL 8.27e-01 -0.0184 0.084 0.325 NK_CD56dim LOneK1K
ENSG00000162604 TM2D1 91979 sc-eQTL 6.53e-02 -0.138 0.0745 0.325 NK_CD56dim LOneK1K
ENSG00000162607 USP1 -618895 sc-eQTL 1.67e-02 -0.195 0.0807 0.325 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000132855 ANGPTL3 -780085 pQTL 0.00954 0.0834 0.0321 0.00207 0.0 0.287
ENSG00000162599 NFIA 952143 eQTL 0.0268 0.0512 0.0231 0.00148 0.0 0.289

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina