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Genes within 1Mb (chr1:51173462:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000078618 NRDC -705475 sc-eQTL 1.89e-01 -0.299 0.227 0.056 B_Activated L2
ENSG00000085832 EPS15 -345804 sc-eQTL 9.22e-01 0.0211 0.216 0.056 B_Activated L2
ENSG00000117859 OSBPL9 -403717 sc-eQTL 7.92e-01 0.0594 0.225 0.056 B_Activated L2
ENSG00000117862 TXNDC12 -882709 sc-eQTL 7.69e-01 -0.0631 0.214 0.056 B_Activated L2
ENSG00000123080 CDKN2C 212717 sc-eQTL 7.40e-01 -0.0546 0.164 0.056 B_Activated L2
ENSG00000123091 RNF11 -62811 sc-eQTL 3.31e-01 0.197 0.202 0.056 B_Activated L2
ENSG00000134717 BTF3L4 -882737 sc-eQTL 8.37e-01 0.0465 0.226 0.056 B_Activated L2
ENSG00000185104 FAF1 213195 sc-eQTL 3.90e-01 0.175 0.204 0.056 B_Activated L2
ENSG00000198841 KTI12 -860348 sc-eQTL 7.18e-01 -0.0657 0.182 0.056 B_Activated L2
ENSG00000078618 NRDC -705475 sc-eQTL 7.60e-01 0.0619 0.202 0.05 CD8_TEM L2
ENSG00000085832 EPS15 -345804 sc-eQTL 4.63e-01 -0.135 0.184 0.05 CD8_TEM L2
ENSG00000117859 OSBPL9 -403717 sc-eQTL 1.18e-02 -0.541 0.213 0.05 CD8_TEM L2
ENSG00000117862 TXNDC12 -882709 sc-eQTL 1.76e-01 -0.265 0.195 0.05 CD8_TEM L2
ENSG00000123080 CDKN2C 212717 sc-eQTL 3.71e-01 -0.183 0.204 0.05 CD8_TEM L2
ENSG00000123091 RNF11 -62811 sc-eQTL 8.77e-01 -0.0321 0.208 0.05 CD8_TEM L2
ENSG00000134717 BTF3L4 -882737 sc-eQTL 7.13e-01 0.0779 0.211 0.05 CD8_TEM L2
ENSG00000157077 ZFYVE9 -968632 sc-eQTL 9.18e-02 0.307 0.181 0.05 CD8_TEM L2
ENSG00000185104 FAF1 213195 sc-eQTL 7.79e-01 0.0575 0.204 0.05 CD8_TEM L2
ENSG00000198841 KTI12 -860348 sc-eQTL 9.62e-01 -0.00951 0.202 0.05 CD8_TEM L2
ENSG00000078618 NRDC -705475 sc-eQTL 8.90e-01 -0.0243 0.176 0.051 NK_CD56bright L2
ENSG00000085832 EPS15 -345804 sc-eQTL 4.11e-01 0.144 0.175 0.051 NK_CD56bright L2
ENSG00000117859 OSBPL9 -403717 sc-eQTL 9.20e-01 0.0194 0.193 0.051 NK_CD56bright L2
ENSG00000117862 TXNDC12 -882709 sc-eQTL 9.68e-02 0.333 0.2 0.051 NK_CD56bright L2
ENSG00000123080 CDKN2C 212717 sc-eQTL 8.71e-01 0.0294 0.181 0.051 NK_CD56bright L2
ENSG00000123091 RNF11 -62811 sc-eQTL 4.46e-02 -0.361 0.178 0.051 NK_CD56bright L2
ENSG00000134717 BTF3L4 -882737 sc-eQTL 1.82e-01 0.255 0.19 0.051 NK_CD56bright L2
ENSG00000185104 FAF1 213195 sc-eQTL 9.25e-01 -0.0159 0.168 0.051 NK_CD56bright L2
ENSG00000198841 KTI12 -860348 sc-eQTL 5.47e-01 0.109 0.18 0.051 NK_CD56bright L2
ENSG00000078618 NRDC -705475 sc-eQTL 2.47e-01 -0.233 0.201 0.053 NK_HLA L2
ENSG00000085832 EPS15 -345804 sc-eQTL 2.95e-01 -0.161 0.153 0.053 NK_HLA L2
ENSG00000117859 OSBPL9 -403717 sc-eQTL 3.01e-01 -0.193 0.186 0.053 NK_HLA L2
ENSG00000117862 TXNDC12 -882709 sc-eQTL 3.04e-01 -0.199 0.193 0.053 NK_HLA L2
ENSG00000123080 CDKN2C 212717 sc-eQTL 7.26e-01 0.0646 0.184 0.053 NK_HLA L2
ENSG00000123091 RNF11 -62811 sc-eQTL 6.35e-01 0.0866 0.182 0.053 NK_HLA L2
ENSG00000134717 BTF3L4 -882737 sc-eQTL 2.44e-02 -0.434 0.191 0.053 NK_HLA L2
ENSG00000185104 FAF1 213195 sc-eQTL 1.17e-01 -0.272 0.173 0.053 NK_HLA L2
ENSG00000198841 KTI12 -860348 sc-eQTL 9.93e-01 -0.00168 0.191 0.053 NK_HLA L2
ENSG00000078618 NRDC -705475 sc-eQTL 6.42e-01 -0.09 0.193 0.051 cDC L2
ENSG00000085831 TTC39A -171654 sc-eQTL 7.81e-01 -0.0176 0.0632 0.051 cDC L2
ENSG00000085832 EPS15 -345804 sc-eQTL 1.76e-01 0.292 0.215 0.051 cDC L2
ENSG00000117859 OSBPL9 -403717 sc-eQTL 8.25e-01 0.0439 0.198 0.051 cDC L2
ENSG00000117862 TXNDC12 -882709 sc-eQTL 8.87e-01 -0.027 0.189 0.051 cDC L2
ENSG00000123080 CDKN2C 212717 sc-eQTL 7.03e-01 -0.078 0.204 0.051 cDC L2
ENSG00000123091 RNF11 -62811 sc-eQTL 4.92e-01 0.145 0.21 0.051 cDC L2
ENSG00000134717 BTF3L4 -882737 sc-eQTL 7.94e-01 0.05 0.191 0.051 cDC L2
ENSG00000185104 FAF1 213195 sc-eQTL 3.66e-01 -0.172 0.19 0.051 cDC L2
ENSG00000198841 KTI12 -860348 sc-eQTL 7.50e-01 0.0638 0.2 0.051 cDC L2
ENSG00000078618 NRDC -705475 sc-eQTL 4.47e-01 -0.137 0.18 0.051 intMono L2
ENSG00000085832 EPS15 -345804 sc-eQTL 8.46e-01 0.0352 0.181 0.051 intMono L2
ENSG00000117859 OSBPL9 -403717 sc-eQTL 1.93e-01 -0.267 0.204 0.051 intMono L2
ENSG00000117862 TXNDC12 -882709 sc-eQTL 1.03e-01 0.233 0.142 0.051 intMono L2
ENSG00000123080 CDKN2C 212717 sc-eQTL 9.63e-01 -0.00829 0.179 0.051 intMono L2
ENSG00000123091 RNF11 -62811 sc-eQTL 1.74e-01 -0.24 0.176 0.051 intMono L2
ENSG00000134717 BTF3L4 -882737 sc-eQTL 7.80e-01 0.0495 0.177 0.051 intMono L2
ENSG00000185104 FAF1 213195 sc-eQTL 3.66e-01 0.169 0.187 0.051 intMono L2
ENSG00000198841 KTI12 -860348 sc-eQTL 8.60e-01 0.0356 0.201 0.051 intMono L2
ENSG00000078618 NRDC -705475 sc-eQTL 9.47e-01 0.0121 0.18 0.052 ncMono L2
ENSG00000085832 EPS15 -345804 sc-eQTL 5.53e-01 0.0983 0.165 0.052 ncMono L2
ENSG00000117859 OSBPL9 -403717 sc-eQTL 8.27e-01 -0.0407 0.186 0.052 ncMono L2
ENSG00000117862 TXNDC12 -882709 sc-eQTL 2.70e-01 -0.191 0.172 0.052 ncMono L2
ENSG00000123080 CDKN2C 212717 sc-eQTL 6.15e-01 -0.092 0.183 0.052 ncMono L2
ENSG00000123091 RNF11 -62811 sc-eQTL 7.42e-01 -0.0571 0.174 0.052 ncMono L2
ENSG00000134717 BTF3L4 -882737 sc-eQTL 1.42e-01 0.24 0.163 0.052 ncMono L2
ENSG00000185104 FAF1 213195 sc-eQTL 2.20e-01 0.19 0.154 0.052 ncMono L2
ENSG00000198841 KTI12 -860348 sc-eQTL 5.40e-01 0.12 0.195 0.052 ncMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000078618 NRDC -705475 eQTL 0.00472 -0.0469 0.0166 0.0 0.0 0.0604
ENSG00000117859 OSBPL9 -403717 eQTL 2.38e-17 0.242 0.028 0.0 0.0 0.0604
ENSG00000123091 RNF11 -62811 eQTL 0.012 0.0698 0.0277 0.00108 0.0 0.0604
ENSG00000198841 KTI12 -860354 eQTL 0.0241 -0.0809 0.0358 0.0 0.0 0.0604

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117859 OSBPL9 -403717 9.36e-07 4.97e-07 9.49e-08 3.87e-07 1.07e-07 1.85e-07 5.28e-07 9.91e-08 3.94e-07 2.16e-07 5.73e-07 3.36e-07 7.71e-07 1.17e-07 1.57e-07 2.1e-07 2.48e-07 3.67e-07 1.69e-07 1.28e-07 1.92e-07 3.34e-07 3.7e-07 1.23e-07 7.94e-07 2.39e-07 2.22e-07 2.68e-07 3.56e-07 5.17e-07 2.83e-07 7.6e-08 4.74e-08 1.37e-07 3.05e-07 1.02e-07 1.1e-07 7.75e-08 4.44e-08 5.12e-08 8.29e-08 6.15e-07 1.65e-08 1.89e-08 1.08e-07 1.95e-08 7.36e-08 7.25e-09 5.58e-08
ENSG00000123080 \N 212717 1.64e-06 1.39e-06 2.29e-07 1.3e-06 3.58e-07 6.36e-07 1.48e-06 3.9e-07 1.67e-06 6.07e-07 2.08e-06 8.44e-07 2.73e-06 3.34e-07 5.36e-07 9.52e-07 9.41e-07 1.02e-06 8.2e-07 5.05e-07 7.85e-07 1.91e-06 1.13e-06 5.17e-07 2.39e-06 7.64e-07 9.36e-07 8.98e-07 1.6e-06 1.32e-06 7.84e-07 2.09e-07 2.67e-07 6.19e-07 6.01e-07 5.32e-07 6.81e-07 2.74e-07 4.89e-07 2.64e-07 2.82e-07 2.01e-06 1.38e-07 9.64e-08 2.95e-07 1.99e-07 2.39e-07 5.98e-08 1.14e-07