Genes within 1Mb (chr1:47489252:C:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079277 MKNK1 872409 eQTL 2.51e-02 -0.0347 0.0155 0.0 0.0 0.195
ENSG00000132122 SPATA6 -982956 eQTL 8.49e-02 -0.0389 0.0226 0.0016 0.0 0.195
ENSG00000142961 MOB3C 872361 eQTL 3.96e-02 -0.0481 0.0233 0.0 0.0 0.195
ENSG00000162366 PDZK1IP1 298208 eQTL 2.78e-10 0.219 0.0343 0.0 0.0 0.195
ENSG00000162368 CMPK1 155455 eQTL 9.89e-06 0.056 0.0126 0.0 0.0 0.195
ENSG00000224805 LINC00853 310002 eQTL 5.26e-03 0.0693 0.0248 0.0 0.0 0.195
ENSG00000237424 FOXD2-AS1 54611 eQTL 2.09e-02 0.0703 0.0304 0.0 0.0 0.195
ENSG00000272491 AL109659.2 -740309 eQTL 1.94e-02 -0.0911 0.0389 0.00115 0.0 0.195


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina