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Genes within 1Mb (chr1:46628029:C:T):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079277 MKNK1 11186 eQTL 3.89e-27 0.138 0.0124 0.0 0.0 0.36
ENSG00000123472 ATPAF1 -45838 eQTL 1.84e-07 0.106 0.0202 0.0 0.0 0.36
ENSG00000142961 MOB3C 11138 eQTL 1.19e-22 0.19 0.0189 0.00216 0.0 0.36
ENSG00000159596 TMEM69 939848 eQTL 2.56e-02 -0.0517 0.0231 0.0 0.0 0.36
ENSG00000159658 EFCAB14 -91085 pQTL 4.95e-06 0.0771 0.0168 0.00656 0.00631 0.354
ENSG00000159658 EFCAB14 -91085 eQTL 1.03e-19 0.179 0.0193 0.0026 0.0 0.36
ENSG00000197429 IPP 877379 eQTL 2.86e-02 0.0468 0.0214 0.0 0.0 0.36
ENSG00000237424 FOXD2-AS1 -806612 eQTL 2.34e-02 0.0587 0.0259 0.0 0.0 0.36
ENSG00000269956 MKNK1-AS1 89333 eQTL 8.06e-04 0.0814 0.0242 0.0 0.0 0.36

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina